GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001511-TA|BGIBMGA001511-PA|IPR001251|Cellular
retinaldehyde-binding/triple function, C-terminal
         (209 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    25   2.2  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   6.7  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   8.9  

>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 124 FHEPNSDTLYKDIPQEILPSDYGGKAGSVE 153
           F+   +  ++ D+P E LP  Y   AGS++
Sbjct: 20  FYPKYNGEVFMDLPPEYLPERYQRIAGSIK 49


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 103 IGKLYAICKPFLKTEVAKL 121
           I + +AIC PFL   ++KL
Sbjct: 142 IERYFAICHPFLSHTMSKL 160


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 10/35 (28%), Positives = 22/35 (62%)

Query: 161  KKMEAKRDWFLTNDTRWAVDESQRPSSCQDARVDK 195
            ++ + ++D  LTN+ +  V ++Q  S+   ++VDK
Sbjct: 1493 REAQIRKDLNLTNEAKEKVGQAQLNSNEAKSQVDK 1527


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.136    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,494
Number of Sequences: 2123
Number of extensions: 7970
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30
Number of HSP's gapped (non-prelim): 3
length of query: 209
length of database: 516,269
effective HSP length: 61
effective length of query: 148
effective length of database: 386,766
effective search space: 57241368
effective search space used: 57241368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)