Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001510-TA|BGIBMGA001510-PA|IPR001412|Aminoacyl-tRNA
synthetase, class I, IPR005113|uDENN, IPR001194|DENN, IPR005112|dDENN,
IPR002885|Pentatricopeptide repeat
(1604 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 58 1e-08
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 37 0.026
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 36 0.046
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 36 0.061
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 33 0.25
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 33 0.25
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 33 0.43
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 32 0.75
SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr ... 31 0.99
SPAC23C11.01 |||ER membrane protein, ICE2 family|Schizosaccharom... 31 1.7
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 29 4.0
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 29 4.0
SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 29 5.3
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 29 5.3
SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyc... 29 7.0
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 29 7.0
SPCC13B11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 3... 29 7.0
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 9.3
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 28 9.3
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Query: 342 AITEQKILIHSLRPDTLTAVSEAVSSLLFPFKWQCPYIPLCPLGLAEVLHAPLPYLIGVD 401
A+ E K++ S L S+A+ LL+P WQ YIP+ P L AP Y+IG
Sbjct: 479 ALMEAKVIFLSENLGMLGYASQALLHLLYPLTWQGLYIPVLPRRLISCFEAPCSYIIGTL 538
Query: 402 SRFFDLYEPPPDVTCVDLDTNNITVCESQRNNISIKLLPKRQVKALKQTLETLYGSIRPA 461
S FF + + P LD + VC+ +N++S R ++L+ L+ ++ A
Sbjct: 539 SYFFHMDDVP-------LDNIPLVVCDLDKNSVSTFGKIVRLSRSLRSKLQ---AHLKLA 588
Query: 462 SPIH 465
+P+H
Sbjct: 589 APLH 592
Score = 39.1 bits (87), Expect = 0.005
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 175 DVLFRYPVTDRRSLAFPPSVPLFCLPMGATLELWPNNAASPKPVFSTFVLTVADATEKVY 234
D+ P DR FP VP+F P T++ + P + +F LT +D +Y
Sbjct: 196 DIKNETPTIDRCD--FPNYVPMFAFPNDITIK---ESDVRPVSTYHSFALT-SDNNSHLY 249
Query: 235 GSAVTFYESYPYSELTETQMELLGWRAN 262
G V + + P S + + E WRAN
Sbjct: 250 GICVVVWVAMPQSMQNDLEKECEVWRAN 277
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 36.7 bits (81), Expect = 0.026
Identities = 44/182 (24%), Positives = 68/182 (37%), Gaps = 5/182 (2%)
Query: 1124 SNSFQDDPPEQLGKLHRSETVPAGTVSSSLVSLGNTLKLNFGPTSMAGKKSNELLQSGLS 1183
S+S D L S +V SSSL S F S + S + S S
Sbjct: 135 SSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSS 194
Query: 1184 SLKSAA--TSMAKKFDEMKEVISANSTPVKGAIGTATS---ALGAFRADDDGVDASSEIN 1238
S S+A TS + + V+S++S+P + T TS + + + ++S
Sbjct: 195 STFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSL 254
Query: 1239 SDELIGGTGFRRASSEAELACSMERGSLATLISHLPDNLYPQTSAPVKPESVGVSVHMSS 1298
S T +SS + ++ S S T S + +S+P S S SS
Sbjct: 255 SSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSS 314
Query: 1299 CS 1300
S
Sbjct: 315 SS 316
Score = 30.3 bits (65), Expect = 2.3
Identities = 36/197 (18%), Positives = 62/197 (31%), Gaps = 7/197 (3%)
Query: 876 TSGSSTLPRVRXXXXXXXXXXXXXXXXXXXXPAHSRTSLDSVCGRENEARCSAFEALCRR 935
TS S + + A S +S S+ + + S
Sbjct: 231 TSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTST---S 287
Query: 936 GNIVXXXXXXXXXXXXXXXXXXXXXSGVPSNPDLSSSTRPRSNSLGNDEPDSPITVSDKR 995
I S + LSSS+ S+S + S T+S
Sbjct: 288 STISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSS 347
Query: 996 QTIHVSPDSPSDLRILTRSESFAGDAQIVQNLQRLSFTGISNAKTKCSRALSFPEESDKD 1055
SP S S + S+S + + V + S + ++++ + SR S S
Sbjct: 348 S----SPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSL 403
Query: 1056 VDVETLKTSKASPLRVS 1072
++ +SK+S VS
Sbjct: 404 SSHKSSSSSKSSSAPVS 420
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 35.9 bits (79), Expect = 0.046
Identities = 77/372 (20%), Positives = 145/372 (38%), Gaps = 35/372 (9%)
Query: 964 PSNPDLSSSTRPRSNSLGNDEPDSPITVS---DKRQTIHVSPDSPSDLRILTRSESFAGD 1020
PS+ LS S+ S++ + SP ++S TI SP + +++ S +G
Sbjct: 587 PSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGS 646
Query: 1021 AQIVQNLQRLSFTGISNAKTKCSRALSFPEESDKDVDVETLKTSKASPLRVSPRTPVLSD 1080
+ I+ + +S IS++ + S ++ P S TL +S +S ++S
Sbjct: 647 SSILSS--SISTIPISSSLSTYSSSV-IPSSS-------TLVSSSSS--------LIVSS 688
Query: 1081 DPLGALSVPPVPDEXXXXXXXXXXXXXXXKHELSV----SPKLFHRRSNSFQDDPPEQLG 1136
P+ + S P+P LS+ S NS
Sbjct: 689 SPVASSSSSPIPSSSSLVSTYSASLSNITHSSLSLTAMSSSSAIPTSVNSSTLITASSSN 748
Query: 1137 KLHRSETVPAGTVSSSLVSLGNTLKLNFGPTSMAGKKSNELLQSGL----SSLKSAATSM 1192
L S T + VSS+ VS ++ + +S + ++ L + L SS ++ +TS
Sbjct: 749 TLLSSITSSSAIVSSTTVSNISSNLPSATASSQSQLTNSSTLATSLYLSSSSSRTISTSS 808
Query: 1193 AKKFDEMKEVISANSTPVKGAIGTATSALGAFRADDDGVDASSEINSDELIGGTGFRRAS 1252
+++ + +ST ++T++L A + + S + S + T + S
Sbjct: 809 TNEYNTSFHAPTVSST----TSSSSTTSLAANKGVNSNSITSLNLESTSSVTSTAYTTDS 864
Query: 1253 SEAELACSMERGSLATLISHLPDNLYPQTSAPVKPESVGVSVHMSSCSQCHQCLALLYDE 1312
+ A + + S + + S L TS PV SV +V S+ S+ + D
Sbjct: 865 VTSTTALTSQGPSSSVVSSSLSSTTSLSTSIPV-TSSVAPAV-TSTGSETSSVVGSGTDS 922
Query: 1313 DIMAGWAADDSN 1324
+ W A+ S+
Sbjct: 923 ATSSSWTAETSS 934
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 35.5 bits (78), Expect = 0.061
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 1151 SSLVSLGNTLKLNFGPTSMAGKKSNELLQSGLSSLKSAATSMAKKFDEMKEVISANSTPV 1210
S+ +S + LK S+ +K +LL++ + SLK + TS ++ +EM E+ +N T +
Sbjct: 325 STRISEFDNLKSERDTLSIKNEKLEKLLRNTIGSLKDSRTSNSQLEEEMVELKESNRT-I 383
Query: 1211 KGAIGTATSALGAFRADDDGVDASSEINSDELIGGTGF-RRASSEAELACS 1260
+ A S L +F ++ + S + + L ++ SS+ E A S
Sbjct: 384 HSQLTDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSSQLEEARS 434
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 33.5 bits (73), Expect = 0.25
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 1121 HRRSN-SFQDDPPEQLGKLHRSETVPAGTVSSSLVSLGNTLKLNFGPTSMA--GKKS--- 1174
H R N SF PP Q G + T S++ VSL ++ P+S++ KKS
Sbjct: 1610 HSRYNASFSSSPPPQPGNSSGMSAMNTNTTSTTPVSLSELSEITLFPSSVSPTWKKSFGN 1669
Query: 1175 -NELLQSGLSSLK-SAATSMAKKFDE----MKEVISANSTPVKGAIGTATSALGAFRADD 1228
N L+ GL + S + +DE +++ ++ + V G++G + +G
Sbjct: 1670 ANTNLKYGLEDMSLSHRRGHKRTYDEHLNNVQQGVNHDMNRVHGSVGGMSGIVGIGIGIG 1729
Query: 1229 DGVDASSEINS 1239
DG D +++S
Sbjct: 1730 DG-DGDGDVDS 1739
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 33.5 bits (73), Expect = 0.25
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 1121 HRRSN-SFQDDPPEQLGKLHRSETVPAGTVSSSLVSLGNTLKLNFGPTSMA--GKKS--- 1174
H R N SF PP Q G + T S++ VSL ++ P+S++ KKS
Sbjct: 1610 HSRYNASFSSSPPPQPGNSSGMSAMNTNTTSTTPVSLSELSEITLFPSSVSPTWKKSFGN 1669
Query: 1175 -NELLQSGLSSLK-SAATSMAKKFDE----MKEVISANSTPVKGAIGTATSALGAFRADD 1228
N L+ GL + S + +DE +++ ++ + V G++G + +G
Sbjct: 1670 ANTNLKYGLEDMSLSHRRGHKRTYDEHLNNVQQGVNHDMNRVHGSVGGMSGIVGIGIGIG 1729
Query: 1229 DGVDASSEINS 1239
DG D +++S
Sbjct: 1730 DG-DGDGDVDS 1739
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 32.7 bits (71), Expect = 0.43
Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 5/158 (3%)
Query: 1148 TVSSSLVSLGNTLKLNFGP-----TSMAGKKSNELLQSGLSSLKSAATSMAKKFDEMKEV 1202
TVSSS VS + + P T+ S+ S SS S+++S +
Sbjct: 126 TVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 185
Query: 1203 ISANSTPVKGAIGTATSALGAFRADDDGVDASSEINSDELIGGTGFRRASSEAELACSME 1262
S++S+ + +++S+ + +S +S + R SS + +M
Sbjct: 186 SSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMS 245
Query: 1263 RGSLATLISHLPDNLYPQTSAPVKPESVGVSVHMSSCS 1300
+ + ++ P + TS+ V + ++++ S S
Sbjct: 246 SSTFISTVTVTPSSSSSSTSSEVPSSTAALALNASKAS 283
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.9 bits (69), Expect = 0.75
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 15/165 (9%)
Query: 1141 SETVPAGTVSSSLVSLGNTLK-LNFGPTSMAGKKSNELLQSGLSSLKSAATSMAKKFDEM 1199
+ T A SSSL S T L T+ + S+ + S L+S ++S+A
Sbjct: 97 NSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTS 156
Query: 1200 KEVISANS------TPVKGAIGTATSALGAFRADDDGVDASSEINSDELIGGTGFRRASS 1253
+ S+++ TP A ++ S+ A + ASS +NS T +SS
Sbjct: 157 SSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATAT----SSS 212
Query: 1254 EAELACSMERGSLATLISHLPDNLYPQTSAPVKPESVGVSVHMSS 1298
+ A S + AT S +L TSA S+ +V S+
Sbjct: 213 LSSTAAS----NSATSSSLASSSLNSTTSATATSSSISSTVSSST 253
Score = 31.1 bits (67), Expect = 1.3
Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 5/163 (3%)
Query: 1113 LSVSPKLFHRRSNSFQDDPPEQLGKLHRSETVPAG--TVSSSLVSLGNTLKLNFGPTSMA 1170
LS P L R + S+ + S + + T SSSL S + PTS +
Sbjct: 49 LSSVPTLLKRATTSYNYNTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTS-S 107
Query: 1171 GKKSNELLQSGLSSLKSAATSMAKKFDEMKEVISANSTPVKGAIGTATSALGAFRADDDG 1230
S+ S L+S + ++S+A + S++ T A + TS+ A + +
Sbjct: 108 SLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNST 167
Query: 1231 VDA--SSEINSDELIGGTGFRRASSEAELACSMERGSLATLIS 1271
A +S S L A+S + + S+ + AT S
Sbjct: 168 TSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATS 210
Score = 28.7 bits (61), Expect = 7.0
Identities = 43/162 (26%), Positives = 63/162 (38%), Gaps = 14/162 (8%)
Query: 1141 SETVPAGTVSSSLVSLGNTLKLNFGPTSMAGKKSNELLQSGLSSLKSAATSMAKKFDEMK 1200
S + T SSSL S + PTS A S L S +S + ++S+A
Sbjct: 147 SSLASSSTTSSSLASSSTNSTTSATPTSSATSSS---LSSTAASNSATSSSLASS----- 198
Query: 1201 EVISANSTPVKGAIGTATSALGAFRADDDGVDASSEINSDELIGGTGFRRAS--SEAELA 1258
S NST A ++ S+ A + ASS +NS T +S S +
Sbjct: 199 ---SLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPL 255
Query: 1259 CSMERGSLATLISHLPDNLYPQTSAPVKPESVGVSVHMSSCS 1300
S + AT S + TS+ + P S S +SS +
Sbjct: 256 TSSNSTTAATSASATSSSAQYNTSS-LLPSSTPSSTPLSSAN 296
>SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 727
Score = 31.5 bits (68), Expect = 0.99
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 375 QCPYIPLCPLG-LAEVLHAPLPYLIGVDSRFFDLYEPPPDV 414
QC Y+ L +AE+L A LP+L D D+ PPDV
Sbjct: 591 QCNYLSADQLSHVAEILRAALPHLRNTDEIEIDVSAMPPDV 631
>SPAC23C11.01 |||ER membrane protein, ICE2
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 262 NVSQNTHSVHVVKSVCLLSRWPFSDTFERWLLYILLSPSN 301
N+ + S+ VV+++ LSRW + E W+ +ILL+ S+
Sbjct: 163 NLLEGMASLLVVQALGHLSRWLVHNKSENWMFFILLNASS 202
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 1009 RILTRSESFAGDAQIVQNLQRL-SFTGISNAKTKCSRALSFPEESDKDVDV 1058
RI+ +SFA LQRL +FTG ++ L E + +DVDV
Sbjct: 727 RIIQSIDSFADSNVRADTLQRLQNFTGTDAVNVGVAKILMIAETAKQDVDV 777
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 29.5 bits (63), Expect = 4.0
Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 9/125 (7%)
Query: 1151 SSLVSLGNTL---------KLNFGPTSMAGKKSNELLQSGLSSLKSAATSMAKKFDEMKE 1201
+SL S GN L ++ TSM+ S+ S SS KS+++S ++
Sbjct: 488 ASLTSFGNFLGTATSYSSASASYPSTSMSASLSSVHTSSATSSSKSSSSSSSRSGSSSSS 547
Query: 1202 VISANSTPVKGAIGTATSALGAFRADDDGVDASSEINSDELIGGTGFRRASSEAELACSM 1261
+ ST G+ T TS + SS + + +SS E + +
Sbjct: 548 SSRSGSTSSSGSSHTITSTSQSVHTSGSSTSTSSVAVTSTAYSSSSSSSSSSSIESSANA 607
Query: 1262 ERGSL 1266
R S+
Sbjct: 608 VRVSI 612
>SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 516
Score = 29.1 bits (62), Expect = 5.3
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 1174 SNELLQSGLSSLKSAATSMAKKFDEMKEVISANSTPVKGAIGTATSALGAFRADDDGVDA 1233
SNE + G+ + S+ S K DE+ EV +NS +IG +++ L + D+
Sbjct: 147 SNE--EVGIPATNSSEKSNVKIADEIAEVTHSNS-----SIGKSSADLSS--------DS 191
Query: 1234 SSEINSDELIGGTGFRRASSEAEL-ACSMERGSLATLISHLPDNLYPQTSAPVKPESV 1290
SS+ S+ T +E + A SM + ++ LP+ +Y + ++P S+
Sbjct: 192 SSDSESNTSFSETDVEEEKAEEKSDAESMAPSTPPKTVNELPEQIYEKPEIVLQPNSL 249
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 5 SGGGTIYSKQGVVFPTLG---ETVPDGYELVETT 35
S GT+ +Q +V+PT G ET+ G E+ TT
Sbjct: 321 SASGTVSGEQVIVYPTAGMVTETIVSGSEIFNTT 354
>SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 688
Score = 28.7 bits (61), Expect = 7.0
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Query: 967 PDLSSSTRPRSNSLGNDEPDSPITVSDKRQTIHVSPDSPSDLRILTRSESFAGDAQIVQN 1026
P +ST P+ S + P++ D +H SP L++L+ S +F+ + +
Sbjct: 152 PPAHAST-PKFRSHKSHRVAVPMSFMDS-SALHTSPAFSERLKLLSSSNNFSPQLRSPKI 209
Query: 1027 LQRLSFTGISNAKTKCSRALSFPEESDKDVDVETLKTSKAS 1067
RL + S+ + PE +D++ L +++ S
Sbjct: 210 SHRLQTSATSSPLQHKRPFTNVPERVSRDIEFAPLDSARPS 250
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 28.7 bits (61), Expect = 7.0
Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 5/152 (3%)
Query: 1144 VPAGTVSSS----LVSLGNTLKLNFGPTSMAG-KKSNELLQSGLSSLKSAATSMAKKFDE 1198
VP+G+ S+S L + + +FG T A ++ +E Q G S + S D
Sbjct: 22 VPSGSKSASTNGLLSAASSAAGSSFGLTPSAILQQKHENAQQGKKQNNSKSFSKKPAIDV 81
Query: 1199 MKEVISANSTPVKGAIGTATSALGAFRADDDGVDASSEINSDELIGGTGFRRASSEAELA 1258
E G + A + V S ++ D++ R +S+++ L+
Sbjct: 82 HSEDAFPTLLSKTGPSKPRIVSWVRKTASNTSVAGSDSVSRDKIPFSASSRASSTKSTLS 141
Query: 1259 CSMERGSLATLISHLPDNLYPQTSAPVKPESV 1290
E + + PDN P+ S KP SV
Sbjct: 142 SVKETDFVTETLILSPDNQAPRMSFVGKPNSV 173
>SPCC13B11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 138
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1334 RHTVPLLTVKVDALRPCPYCDIKPHIMRTGQTQTETLTVPYLNPLV 1379
RHTV L K+ +L P D P+ +R+ + QT +L P++
Sbjct: 37 RHTVHLCVRKIFSLHPLTETDFLPNELRSEEDQTLIGIFWFLPPII 82
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/71 (25%), Positives = 28/71 (39%)
Query: 1222 GAFRADDDGVDASSEINSDELIGGTGFRRASSEAELACSMERGSLATLISHLPDNLYPQT 1281
G R DD +A TG A A ++ + SLA+L P+ P+
Sbjct: 109 GTSRLDDVAPNADGVRRLRTSGSSTGLSNAPPSANVSKASSNLSLASLAKTQPERATPEV 168
Query: 1282 SAPVKPESVGV 1292
P+ P++ V
Sbjct: 169 CVPLNPDTGSV 179
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 28.3 bits (60), Expect = 9.3
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 4/124 (3%)
Query: 961 SGVPSNPDLSSSTRPRSNSLGNDEPDSPI-TVSDK--RQTIHVSPDSPSDLRILTRSESF 1017
SG + + S++ PR+ S+GN P+ T+ T H P + LT+S S
Sbjct: 243 SGSWRHTNFHSTSHPRAASIGNKSGIPPVPTIPPNIGHSTDHQHPKANIS-GSLTKSSSE 301
Query: 1018 AGDAQIVQNLQRLSFTGISNAKTKCSRALSFPEESDKDVDVETLKTSKASPLRVSPRTPV 1077
+ + +Q+ + S + LS + + V +T S A+P PV
Sbjct: 302 SKNLSTIQSPLKTSNSFFKELSPHSQITLSNVKNNHSHVGSQTKSHSFATPSVFDNNKPV 361
Query: 1078 LSDD 1081
SD+
Sbjct: 362 SSDN 365
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,590,033
Number of Sequences: 5004
Number of extensions: 264539
Number of successful extensions: 670
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 646
Number of HSP's gapped (non-prelim): 34
length of query: 1604
length of database: 2,362,478
effective HSP length: 82
effective length of query: 1522
effective length of database: 1,952,150
effective search space: 2971172300
effective search space used: 2971172300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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