BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001510-TA|BGIBMGA001510-PA|IPR001412|Aminoacyl-tRNA
synthetase, class I, IPR005113|uDENN, IPR001194|DENN, IPR005112|dDENN,
IPR002885|Pentatricopeptide repeat
(1604 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26794| Best HMM Match : DENN (HMM E-Value=1.4e-38) 196 1e-49
SB_24326| Best HMM Match : DENN (HMM E-Value=0) 58 6e-08
SB_20376| Best HMM Match : zf-piccolo (HMM E-Value=5.3) 55 5e-07
SB_59772| Best HMM Match : dDENN (HMM E-Value=1.6e-24) 48 5e-05
SB_7895| Best HMM Match : uDENN (HMM E-Value=5.7e-25) 46 3e-04
SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.009
SB_14165| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.46
SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.46
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 1.1
SB_20256| Best HMM Match : RCSD (HMM E-Value=0.41) 32 3.3
SB_9796| Best HMM Match : uDENN (HMM E-Value=1.1e-35) 32 3.3
SB_7954| Best HMM Match : Myosin_tail_2 (HMM E-Value=1e-22) 31 5.7
SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.6
SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28) 31 7.6
SB_40651| Best HMM Match : Neuromodulin (HMM E-Value=1.2) 31 7.6
SB_40536| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00014) 31 7.6
SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.6
SB_656| Best HMM Match : Pico_P2B (HMM E-Value=7.8) 31 7.6
>SB_26794| Best HMM Match : DENN (HMM E-Value=1.4e-38)
Length = 595
Score = 196 bits (478), Expect = 1e-49
Identities = 97/213 (45%), Positives = 132/213 (61%), Gaps = 20/213 (9%)
Query: 16 VVFPTLGETVPDGYELVETTPTGLPADLNHGSMRSPECFLYLRRGRERPPLVDIGVMYDG 75
V+F +LGE P GYE +E +P G PADLNHGS+R P CFL +RG ++PPL DIGV+Y+G
Sbjct: 73 VIFKSLGERPPPGYEWIEKSPAGFPADLNHGSIRQPSCFLCYKRGSDKPPLTDIGVLYEG 132
Query: 76 KERLMADAEMVLESSGGRVANVNNS-AAKTFITYRRAHPGAPCNALXXXXXXXXXXSKGE 134
K+RLM+ +++ + GR ANVNNS ++T+ITYRRA +L
Sbjct: 133 KDRLMSGCDIITNTPYGRPANVNNSGGSRTYITYRRASQQMAHTSLAVT----------- 181
Query: 135 CPPHAFCMIAKNLNKGLMGSDVFLCYKKSMNRPPLISYKPDVLFRYPVTDRRSLAFPPSV 194
C+I + +GSDV+LCY+KS++R I+Y D+L R+P D P +V
Sbjct: 182 ----EICVIVAS----KVGSDVYLCYRKSLSRAKCITYHADILSRFPEKDYEGFPLPEAV 233
Query: 195 PLFCLPMGATLELWPNNAASPKPVFSTFVLTVA 227
P+FCLP+GA +E WP P P+FSTFVLT A
Sbjct: 234 PMFCLPLGAIIECWPEKCQHPLPLFSTFVLTGA 266
Score = 144 bits (350), Expect = 4e-34
Identities = 71/151 (47%), Positives = 97/151 (64%), Gaps = 10/151 (6%)
Query: 271 HVVKSVCLLSRWPFSDTFERWLLYILLSPSNPSDRVIVTRRDDQPLVRSGASFRQXXXXX 330
H K +C+LS WPF + F+++L + R+ V+ + Q + SGAS+
Sbjct: 280 HTNKCICILSHWPFFEAFKKFLSQLY--------RISVSAQ--QIPIESGASYSAMLRHL 329
Query: 331 XXXXXXXXXXXAITEQKILIHSLRPDTLTAVSEAVSSLLFPFKWQCPYIPLCPLGLAEVL 390
+TE KILIHSLRP LT+V+EA++++LFPF WQCPYIPLCP+ L +VL
Sbjct: 330 GPDNCLLLFYLILTEHKILIHSLRPALLTSVAEALTNVLFPFTWQCPYIPLCPVALNDVL 389
Query: 391 HAPLPYLIGVDSRFFDLYEPPPDVTCVDLDT 421
AP P++IG+DSR+FD Y+PP DVT VDLDT
Sbjct: 390 CAPCPFIIGIDSRYFDQYDPPDDVTSVDLDT 420
Score = 81.4 bits (192), Expect = 5e-15
Identities = 41/82 (50%), Positives = 52/82 (63%)
Query: 508 TLQGYRSYLIPITKAPTVGTTDPDALFQMNEFLRSREKTQQRFFTLMMRTQMFTRFIEES 567
T+ +SYL PIT PT T D +LF + FL+SR + Q+FF + TQMF+RFIE+
Sbjct: 420 TIMISQSYLKPITSRPTQETCDVTSLFDLQGFLKSRPSSHQKFFQQLTITQMFSRFIEQR 479
Query: 568 SFVYDADQGLTFFDECIEKIAS 589
SFV D L FFDEC EK+ S
Sbjct: 480 SFVTSQDALLAFFDECQEKLDS 501
>SB_24326| Best HMM Match : DENN (HMM E-Value=0)
Length = 1281
Score = 58.0 bits (134), Expect = 6e-08
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 29/241 (12%)
Query: 343 ITEQKILIHSLRPDTLTAVSEAVSSLLFPFKWQCPYIPLCPLGLA---EVLHAPLPYLIG 399
+ EQK++I S + LT A++ LL+P ++ P IPL P +A ++L AP PY+IG
Sbjct: 272 LLEQKVVIQSRDYNALTMSVIALTRLLYPLEYMFPIIPLLPTCMANAEQLLLAPTPYVIG 331
Query: 400 VDSRFFDL----YEPPPDVTCVDLDTNNITVCES---------QRNNISIKLLPKRQVKA 446
V + FF ++ P D+ DLD++ +TV S + + I+ L K ++A
Sbjct: 332 VPASFFRYKSKDFQIPGDLWVFDLDSSKMTVPMSADELPDLPEEEGQVLIRRL-KMALQA 390
Query: 447 LKQTLETLYGSIRPASPIHHSSRNRYNGEATTSLDRDFQKRKKEQALELKIQEAFLR-FM 505
L +T+ G++ A+P N +G+A S++ ++++ ++ A + FM
Sbjct: 391 LSMPPQTV-GNLENAAPDGLLPDNT-SGDA--SIEEHMVFGNDVDSVDVAVRVAIVNFFM 446
Query: 506 ACT-LQGYRSYLIPITKAPTVGTTDPDALFQMNEFLRSREKTQQRFFTLMMRTQMFTRFI 564
+ T L G + + + P P Q FL+SR K F + +Q F
Sbjct: 447 SPTVLCGLQEHTRTLRLFPR-----PVVALQKGPFLKSRPKPSD-FVAALAESQSVEYFA 500
Query: 565 E 565
E
Sbjct: 501 E 501
Score = 34.7 bits (76), Expect = 0.61
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 10/128 (7%)
Query: 174 PDVLFRYPVTDRRSLAFPPSVPLFCLPMGATLELWPNNAASPKPVFSTFVLTVADA-TEK 232
P +L R+P D PP V FC P + S + ++F+ T+ D T K
Sbjct: 33 PRLLRRFPEKDHDDFPLPPDVVFFCQPEACNT---VSKKFSLREA-NSFIFTLTDKDTNK 88
Query: 233 V-YGSAVTFYESYPYSELTETQMELLGWRANVSQNTHSVHV---VKSVCLLSRWPFSDTF 288
V YG + Y + Q + + S++ + + + S+C++S F TF
Sbjct: 89 VRYGVCMNIYRPCSQFHFRDDQDGIKDGKRKRSRSKNKREICMTLTSICIVSHHSFFATF 148
Query: 289 ERWLLYIL 296
R L++L
Sbjct: 149 -RECLFVL 155
>SB_20376| Best HMM Match : zf-piccolo (HMM E-Value=5.3)
Length = 515
Score = 54.8 bits (126), Expect = 5e-07
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 22/90 (24%)
Query: 1366 QTETLTVPYLNPLVLRKEFESVLGREGDSCLIESEFVESHPIVYWNL------------- 1412
+ +++TV Y++PLVLRKE E++L +GD+ L + V I++WN+
Sbjct: 7 ERDSITVAYVSPLVLRKELENMLDNDGDAALQNPDIVHQKDIIFWNMAKILAYKSAFCLR 66
Query: 1413 ---------VWFLERANIESHLPDLLCPNF 1433
+W +R + SHLP+L+ PN+
Sbjct: 67 GSHRCFVSQMWIFKRLELPSHLPELILPNY 96
>SB_59772| Best HMM Match : dDENN (HMM E-Value=1.6e-24)
Length = 423
Score = 48.4 bits (110), Expect = 5e-05
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 361 VSEAVSSLLFPFKWQCPYIPLCPLGLAEVLHAPLPYLIGV---DSRFFDLYEPPPDVTCV 417
V+E V +L+FPF WQ Y+P+ P L L AP+P+++G+ F + P + +
Sbjct: 8 VAEGVVTLIFPFIWQHVYVPILPAALQHFLDAPVPFIMGLYCASEDFKANLQLPSEASLC 67
Query: 418 DLDTNNITVCESQRNNISIKLLPKRQ--VKALKQTLETL-YGSIRPASPIHHSSRNRYNG 474
+D +N V + + P +Q ++ L +T+E S +P+ SS +R +
Sbjct: 68 LVDIDNCKVLSPE----DLPEFPNKQDLIEELLETIEKFNIASQESNNPL--SSNSRCSS 121
Query: 475 EATTSLDRDFQ 485
E SLD +
Sbjct: 122 EG-NSLDNSLE 131
>SB_7895| Best HMM Match : uDENN (HMM E-Value=5.7e-25)
Length = 945
Score = 45.6 bits (103), Expect = 3e-04
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 345 EQKILIHSLRPDTLTAVSEAVSSLLFPFKWQCPYIPLCPLGLAEVLHAPLPYLIGVDSRF 404
+ KIL S LT V+ A+ +L++P K+ YIP+ P L + L AP P ++GV +
Sbjct: 249 KNKILFISSSFVQLTTVTRAMLALMYPLKFSYVYIPILPAALLDFLRAPTPTIMGVHEIY 308
Query: 405 FD 406
D
Sbjct: 309 KD 310
Score = 44.8 bits (101), Expect = 6e-04
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 173 KPDVLFRYPVTDRRSLAFPPSVPLFCLPMGATLELWPNNAASPKPVFSTFVLTVADATEK 232
K VL R+P DR+ +AFP + LFC P G W + F VLT + K
Sbjct: 24 KGKVLQRFPPQDRKDVAFPEGIELFCQPTG-----WKTSYYCRPQTFFVSVLTDMEGDHK 78
Query: 233 VYGSAVTFYESY 244
Y + TFYE Y
Sbjct: 79 -YLACFTFYEPY 89
>SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 40.7 bits (91), Expect = 0.009
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 20/184 (10%)
Query: 963 VPSNPDLSSSTRPRSNSLGNDEPDSPITVSDKRQTIHVSPDSPSDLRILTRSESFAG-DA 1021
V S+P + S RPR S+ ND +SP +P ++ + SES G D
Sbjct: 1022 VLSSPSRTRSARPRRTSMNND-------------LCGISP-APINILKVDDSESSTGRDT 1067
Query: 1022 QIVQNLQRLSFTGISNAKTKCSRAL-SFPEESDKDVDVETLKTSKASPLRVSPRTPVLSD 1080
++V++ +R + + + TK R S S K+ + + SP+R + RT + SD
Sbjct: 1068 RLVRSARRNN-SDTDSVPTKLQRVSESLNSSSSKEYKLHNPSDFEDSPVRETRRTRIRSD 1126
Query: 1081 DPLGALSVPPVPDEXXXXXXXXXXXXXXXKHELSVSPKLFHRRSNSFQDD-PPEQLGKLH 1139
DP PP + + SP RR+ DD P E LG
Sbjct: 1127 DP--PYGSPPAKRKPELEPSDRVEVMKESPLDFENSPARETRRTRLRSDDLPSENLGTRR 1184
Query: 1140 RSET 1143
++E+
Sbjct: 1185 KTES 1188
>SB_14165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1837
Score = 35.1 bits (77), Expect = 0.46
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 995 RQTIHVSPDSPSDLRILTRSESFAGDAQIVQNLQRLSFTGISNAKTKCSRALSFPEESDK 1054
++T+ SP P+ R + E+++ + +NL+ + + KT C+ + S
Sbjct: 432 KRTLRTSPAKPNATRTINSPETYSNASLFYRNLE-ATLKEYKHGKTTCNIRRLMRKNSS- 489
Query: 1055 DVDVETLKTSKASPLRVSPRTPVLSDDPLGALSVPPVPDE 1094
+V T+K K P S R +L DP A+ V +P +
Sbjct: 490 --NVATIKDGKLFPFDNSMRPNLLCKDP-AAICVTLIPSD 526
>SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 35.1 bits (77), Expect = 0.46
Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 5/119 (4%)
Query: 963 VPSNPDLSSSTRPRSNSLGNDEPDSPI---TVSDKRQTIHVSPDSPSDLRILTRSESFAG 1019
V P L RPR+NS + P+ VS ++ V P R ES
Sbjct: 201 VSVEPGLPQLPRPRTNSSNKKKSAPPLPKHVVSPVKRPNKVKAPPPIPPRASESIESKES 260
Query: 1020 DAQIVQNLQRLSF-TGISNAKTKCSRALSFPEESDKDVDVETLKTSKASPL-RVSPRTP 1076
D+ ++ N Q +G+SN +T C+ S P+ + + + + PL R P P
Sbjct: 261 DSNVIVNDQFEEIVSGVSNVETSCTSTPSPPQGEVVENETRSGSPKSSRPLARSRPARP 319
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 33.9 bits (74), Expect = 1.1
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 228 DATEKVYGSAVTFYESY-PYSELTETQMELLGWRANVSQNTHSVHVVKSVCLLSRWPFSD 286
D TE + + YE Y +++TE + ++ ANV + H++KS+CLL + P
Sbjct: 598 DETEHNWTEFIEIYEHYFAANKITEDKFKVSILCANVGPKAY--HIIKSLCLLEK-PADK 654
Query: 287 TFE 289
TFE
Sbjct: 655 TFE 657
>SB_20256| Best HMM Match : RCSD (HMM E-Value=0.41)
Length = 247
Score = 32.3 bits (70), Expect = 3.3
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Query: 961 SGVPSNPDLSSSTRPRSNSLGNDEPDSPITVSDKRQTIHVSPDSPSDLRILTRSESFAGD 1020
SG S LSSS ++S + PD P + S +RQ +HVSP +PS + S S
Sbjct: 21 SGFSSKTPLSSSPVAANSSSSSKRPDVPQSSSRQRQ-VHVSP-APSSTSSSSASTSANSS 78
Query: 1021 --AQIVQNLQRLSFTGISNAKTKCSRALSFPEESDKDVDVETLKTSKA 1066
+ I+ L S I + K K +A S + DK KT A
Sbjct: 79 LTSPIMVALNAKSDMTIKSIKNK--KAAS-DKNGDKKTSTSLKKTQHA 123
>SB_9796| Best HMM Match : uDENN (HMM E-Value=1.1e-35)
Length = 300
Score = 32.3 bits (70), Expect = 3.3
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 171 SYKPDVLFRYPVTDRRSLAFPPSVPLFCLPMGATLELWPNNAASPKPVFSTFVLTVADAT 230
SYK VL +P + +V + P G T A P +F++T D +
Sbjct: 43 SYKAKVLSHFPANVDWNPFDEDAVRMLSFPHGLTFR---TQAEPHSPSLHSFLITREDGS 99
Query: 231 EKVYGSAVTFYESYPYSELTETQMEL 256
+VYG A+T YE E+ + L
Sbjct: 100 -RVYGCALTVYEVVDEEEICKAMQVL 124
>SB_7954| Best HMM Match : Myosin_tail_2 (HMM E-Value=1e-22)
Length = 374
Score = 31.5 bits (68), Expect = 5.7
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 4 FSGGGT---IYSKQGVVFPTLGETVPDGYELVETTPTGLPADLNHG--SMRSPECFLYLR 58
+ GGGT +SK G+ F T+ P G L + P GLP D G + SP R
Sbjct: 241 WGGGGTRLLAFSKSGIDFTTVK---PSGKTLNISVPAGLPPDTRPGRSAGSSPISHTEQR 297
Query: 59 RGRERPPL 66
R +PP+
Sbjct: 298 LERPQPPI 305
>SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2033
Score = 31.1 bits (67), Expect = 7.6
Identities = 18/66 (27%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
Query: 1148 TVSSSLVSLGNTLKLNFGPTSMAGKKSNELLQSGLSSLKSAATSMAKKFDEMKEVISANS 1207
T+ S++++LGN +K G ++ + +SLK+AA + K D+++EV+++ +
Sbjct: 263 TILSAVLTLGN-MKFE------EGDHEGAVIANAHASLKTAAKLLGVKSDKLEEVLTSTT 315
Query: 1208 TPVKGA 1213
T ++G+
Sbjct: 316 TVMRGS 321
>SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28)
Length = 1643
Score = 31.1 bits (67), Expect = 7.6
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 1037 NAKTKCSRALSFPEESDKDVDVETLKTSKASPLRVSPRTPVLSDDPLGALSVPP 1090
NA+ K RA FP E + +D+E +++ +P V P DP A + P
Sbjct: 1333 NAEVK--RAADFPNEPQQSMDIEYGNSTEVTPTNVLSEEPGCQKDPQTANKLAP 1384
>SB_40651| Best HMM Match : Neuromodulin (HMM E-Value=1.2)
Length = 1156
Score = 31.1 bits (67), Expect = 7.6
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 983 DEPDSPITVSDKRQTIHVSPDSPSDLRILTRSESFAGDAQIVQNLQRLSFTGISNAKTKC 1042
++ D IT + Q IH+S +S R +T + L+ ++ + + +
Sbjct: 711 EDVDKVITTDSEPQIIHLSLESSPGSRDVTTTSEKRKSRDKYPKLEYITSLDLEDIEVLK 770
Query: 1043 SRALSFPEESDKDVDVETLKTSKASPLRVSPRT---PVLSDDPLGALSVP 1089
S PE +DV TL S + L SP+ PV D GA +P
Sbjct: 771 SPDKQRPELQRQDVVTRTLTQSAVNELHTSPQNGAEPV--DYKKGAKKIP 818
>SB_40536| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00014)
Length = 672
Score = 31.1 bits (67), Expect = 7.6
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 1252 SSEAELACSMERGSLATLISHLPDNLYPQTSAPVKPESVGVSVHMSSCSQCHQCLALLYD 1311
SS A L+ ++ +L+S LP +L + PE V S+H+ S + Q + +
Sbjct: 409 SSLAYLSVLDHPHNIQSLVSKLPFSLQDRWRREANPEDVLQSIHVRSANGTTQPVYMTMT 468
Query: 1312 EDIMAGWAADDSNLNT 1327
D+ A D++ T
Sbjct: 469 SDLQENVATQDASAQT 484
>SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 31.1 bits (67), Expect = 7.6
Identities = 34/187 (18%), Positives = 70/187 (37%)
Query: 1114 SVSPKLFHRRSNSFQDDPPEQLGKLHRSETVPAGTVSSSLVSLGNTLKLNFGPTSMAGKK 1173
S S + +NS S + + + SSS S N+ + +S +
Sbjct: 46 SSSSRSSSNSNNSSNSSSSSSSSSNSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSS 105
Query: 1174 SNELLQSGLSSLKSAATSMAKKFDEMKEVISANSTPVKGAIGTATSALGAFRADDDGVDA 1233
S+ S SS S+++S + S++S+ + +++S+ + + ++
Sbjct: 106 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNS 165
Query: 1234 SSEINSDELIGGTGFRRASSEAELACSMERGSLATLISHLPDNLYPQTSAPVKPESVGVS 1293
SS +S + +SS + + S S ++ S + +S+ S S
Sbjct: 166 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSS 225
Query: 1294 VHMSSCS 1300
SS S
Sbjct: 226 SSSSSSS 232
>SB_656| Best HMM Match : Pico_P2B (HMM E-Value=7.8)
Length = 146
Score = 31.1 bits (67), Expect = 7.6
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 601 NASERTVFLLPPDPPDPQKTYTYE 624
+AS R+VF+L PDPQK Y Y+
Sbjct: 106 SASTRSVFILIRSVPDPQKRYEYD 129
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,564,502
Number of Sequences: 59808
Number of extensions: 1941404
Number of successful extensions: 4299
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4265
Number of HSP's gapped (non-prelim): 39
length of query: 1604
length of database: 16,821,457
effective HSP length: 92
effective length of query: 1512
effective length of database: 11,319,121
effective search space: 17114510952
effective search space used: 17114510952
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)
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