Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001509-TA|BGIBMGA001509-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like
(527 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 28 0.14
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 27 0.32
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 27 0.32
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 26 0.56
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 26 0.56
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 26 0.56
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 26 0.56
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 25 0.98
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 5.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 5.2
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 28.3 bits (60), Expect = 0.14
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 335 LLKFIPDHTSQTKADTVEVANEVKINKKQKLPDCD 369
+L F+ +H +T + ++V+N VK+ + L D D
Sbjct: 1521 MLYFVIEHKKKTSTEWIQVSNNVKLGQNFVLLDLD 1555
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 27.1 bits (57), Expect = 0.32
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 50 FSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKF 83
F P+ + A +++Q ++K+VAKNI +F
Sbjct: 332 FKPITDFELAVPSFLKLQRGSDISKLVAKNIKEF 365
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 27.1 bits (57), Expect = 0.32
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 50 FSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKF 83
F P+ + A +++Q ++K+VAKNI +F
Sbjct: 332 FKPITDFELAVPSFLKLQRGSDISKLVAKNIKEF 365
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 26.2 bits (55), Expect = 0.56
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 327 RQSEKRKNLLKFIPDHTSQTKADTVEVANEVKINKKQKLPDCDVLIRKMQFSKALTVVLR 386
+ S KRK L+ PD + K+ T ++++N++++ C + + F + R
Sbjct: 205 KSSAKRKQLVSEHPDSPNSKKSATPSPPPQLEVNERKENLTCQPAVPYVPFYR---YCYR 261
Query: 387 PY 388
PY
Sbjct: 262 PY 263
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 26.2 bits (55), Expect = 0.56
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 50 FSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKF 83
F P+ + A +++Q ++K+VAKNI +F
Sbjct: 332 FKPITDFELAVPNFLKLQRGSDISKLVAKNIKEF 365
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 26.2 bits (55), Expect = 0.56
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 50 FSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKF 83
F P+ + A +++Q ++K+VAKNI +F
Sbjct: 332 FKPITDFELAVPNFLKLQRGSDISKLVAKNIKEF 365
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 26.2 bits (55), Expect = 0.56
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 50 FSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKF 83
F P+ + A +++Q ++K+VAKNI +F
Sbjct: 331 FKPITDFELAVPNFLKLQRGSDISKLVAKNIKEF 364
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 25.4 bits (53), Expect = 0.98
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 12 NKAIFKKPASVLTHDIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYD 70
NKA FKK + + W KLGL + KE + L F+ P++ C+V +++++
Sbjct: 386 NKASFKKIVNTVATFDETWAKLGLEINHKEDFRV-CLVFTLTGPFF--TFCNVLMEMWN 441
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.0 bits (47), Expect = 5.2
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 164 FNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETI---MTVNHGSPV-ESTLFL 219
FNE + R S ++ + L Y+HTVK+ + S I + + G+ + T+FL
Sbjct: 843 FNEFYNQRRRWMPSTMANILDLLMDYEHTVKINENISMLYIGYQIILMIGTVIGPGTIFL 902
Query: 220 PSGGIFISAGGTE 232
G F++A G +
Sbjct: 903 MLVGAFVAAFGLD 915
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.0 bits (47), Expect = 5.2
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 164 FNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETI---MTVNHGSPV-ESTLFL 219
FNE + R S ++ + L Y+HTVK+ + S I + + G+ + T+FL
Sbjct: 843 FNEFYNQRRRWMPSTMANILDLLMDYEHTVKINENISMLYIGYQIILMIGTVIGPGTIFL 902
Query: 220 PSGGIFISAGGTE 232
G F++A G +
Sbjct: 903 MLVGAFVAAFGLD 915
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.320 0.136 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,829
Number of Sequences: 317
Number of extensions: 4791
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 10
length of query: 527
length of database: 114,650
effective HSP length: 60
effective length of query: 467
effective length of database: 95,630
effective search space: 44659210
effective search space used: 44659210
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)
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