Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001509-TA|BGIBMGA001509-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like
(527 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 241 8e-64
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 97 2e-20
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 95 8e-20
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 95 1e-19
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 87 3e-17
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 86 6e-17
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 84 3e-16
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 83 3e-16
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 83 4e-16
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 83 4e-16
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 80 3e-15
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 79 7e-15
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 78 2e-14
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 75 2e-13
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 73 5e-13
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 73 6e-13
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 73 6e-13
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 72 8e-13
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 71 1e-12
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 70 4e-12
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 69 8e-12
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 69 1e-11
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 69 1e-11
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 67 3e-11
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 66 4e-11
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 66 4e-11
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 66 4e-11
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 65 1e-10
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 64 3e-10
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 64 3e-10
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 63 4e-10
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 63 5e-10
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 63 5e-10
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 63 5e-10
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 63 5e-10
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 62 7e-10
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 62 9e-10
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 62 1e-09
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 62 1e-09
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 61 2e-09
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 61 2e-09
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 61 2e-09
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 60 5e-09
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 58 1e-08
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 58 1e-08
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 58 1e-08
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 58 1e-08
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 57 3e-08
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 57 3e-08
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 57 3e-08
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 56 4e-08
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 56 4e-08
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 56 4e-08
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 56 4e-08
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 56 6e-08
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 56 6e-08
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 56 8e-08
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 56 8e-08
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 55 1e-07
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 54 3e-07
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 54 3e-07
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 53 4e-07
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 53 4e-07
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 52 7e-07
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 52 7e-07
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 52 7e-07
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 52 7e-07
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 52 7e-07
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 52 9e-07
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 52 9e-07
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 52 9e-07
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 52 1e-06
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 52 1e-06
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 51 2e-06
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 51 2e-06
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 51 2e-06
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 51 2e-06
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 51 2e-06
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 51 2e-06
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 51 2e-06
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 51 2e-06
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 51 2e-06
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 51 2e-06
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 51 2e-06
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 50 5e-06
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 50 5e-06
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 50 5e-06
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 49 7e-06
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 49 7e-06
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 49 7e-06
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 49 9e-06
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 48 2e-05
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 48 2e-05
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 47 4e-05
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 46 5e-05
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 46 5e-05
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 46 5e-05
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 46 5e-05
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 46 6e-05
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 46 6e-05
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 46 6e-05
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 46 6e-05
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 45 1e-04
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 45 1e-04
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 45 1e-04
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 44 2e-04
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 44 3e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 44 3e-04
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 44 3e-04
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 44 3e-04
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 43 4e-04
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 43 4e-04
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 43 4e-04
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 43 6e-04
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 43 6e-04
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 42 8e-04
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 42 8e-04
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 42 8e-04
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 42 8e-04
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 42 8e-04
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 42 0.001
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 42 0.001
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 42 0.001
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 42 0.001
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 42 0.001
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 42 0.001
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 41 0.002
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 41 0.002
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 41 0.002
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 41 0.002
At1g08190.1 68414.m00905 vacuolar assembly protein, putative (VP... 41 0.002
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 41 0.002
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 41 0.002
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 41 0.002
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 41 0.002
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 41 0.002
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 40 0.003
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 40 0.003
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 40 0.003
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 40 0.003
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 40 0.003
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 40 0.005
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 40 0.005
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 40 0.005
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 40 0.005
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 40 0.005
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 39 0.007
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 39 0.007
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 39 0.007
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 39 0.007
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 39 0.009
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 39 0.009
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 38 0.012
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 38 0.012
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 38 0.012
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 38 0.012
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 38 0.016
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 38 0.016
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 38 0.016
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 38 0.022
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 38 0.022
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 37 0.029
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 37 0.029
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 37 0.029
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 37 0.038
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 37 0.038
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 37 0.038
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 36 0.050
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 36 0.050
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 36 0.050
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 36 0.050
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 36 0.050
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 36 0.066
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 36 0.066
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 36 0.088
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 36 0.088
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 36 0.088
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 35 0.12
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 35 0.15
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 35 0.15
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 34 0.20
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 34 0.20
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 34 0.20
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 34 0.20
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 34 0.27
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 34 0.27
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 33 0.35
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 33 0.35
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 33 0.47
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 33 0.62
At4g14310.2 68417.m02205 peroxisomal membrane protein-related co... 33 0.62
At4g14310.1 68417.m02204 peroxisomal membrane protein-related co... 33 0.62
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 33 0.62
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 33 0.62
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 32 0.82
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 32 0.82
At2g39640.1 68415.m04860 glycosyl hydrolase family 17 protein 32 0.82
At4g15740.1 68417.m02396 C2 domain-containing protein similar to... 32 1.1
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 32 1.1
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 31 1.4
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 31 1.4
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 31 1.4
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 31 1.4
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 31 1.9
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 31 1.9
At1g01510.1 68414.m00067 C-terminal binding protein (ANGUSTIFOLI... 31 1.9
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 31 2.5
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 31 2.5
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 31 2.5
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 30 3.3
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 30 3.3
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 30 3.3
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 30 3.3
At4g07340.1 68417.m01128 replication protein-related contains si... 30 4.4
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 29 7.6
At2g03610.1 68415.m00321 F-box family protein contains F-box dom... 29 7.6
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 241 bits (590), Expect = 8e-64
Identities = 163/523 (31%), Positives = 269/523 (51%), Gaps = 40/523 (7%)
Query: 3 QVSFPFKKTNKAIFKKPASVLTHDIIYW---KKLGLPVLVKEFGAIDYLDFSPVEPYYFA 59
QVS F K+ K + T + YW K P LV A L FSPV P+ A
Sbjct: 13 QVSKVFPVKPKSTAKPVSESETPESRYWSSFKNHSTPNLVSSVAA---LAFSPVHPHSLA 69
Query: 60 ATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVL 119
S V ++ + ++ S F + CFR+DG L A V++FD++ + L
Sbjct: 70 VAHSATVSLFSSQSLSSSRRFS-FRDVVSSVCFRSDGALFAACDLSGVVQVFDIKERMAL 128
Query: 120 RVFTGHTGPVHRTFF-TKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASP 178
R H+ P + +D+L ++S DD V WD++ I++ H DY+R G SP
Sbjct: 129 RTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSP 188
Query: 179 ISPDIILSGSYDHTVKLYDCR--SNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVW 236
++ ++++GSYDHTVK++D R ++ I +NHG PVE ++LPSGG+ +AGG +KVW
Sbjct: 189 VNDSMLVTGSYDHTVKVWDARVHTSNWIAEINHGLPVEDVVYLPSGGLIATAGGNSVKVW 248
Query: 237 DIFNGGKLLSNISQHHKTVTTLRLA---SNNSRLMSASLDRHVKIYDVSTFKVVHNIDFP 293
D+ GGK++ ++ H+KTVT+LR+A S SRL+S +LD ++K++D KV +++ FP
Sbjct: 249 DLIGGGKMVCSMESHNKTVTSLRVARMESAESRLVSVALDGYMKVFDYGRAKVTYSMRFP 308
Query: 294 NAILSMAISEHDDILTVGMMDGIISIRKRE--EPVRQSEKRKNLLKFIPD-HTSQTKA-- 348
++S+ +S +G +G++ K++ + V +K NL I D S+ +A
Sbjct: 309 APLMSLGLSPDGSTRVIGGSNGMVFAGKKKVRDVVGGQKKSLNLWSLISDVDESRRRALR 368
Query: 349 ----------DTVEVANE---VKINKKQKLPDCDVLIRKMQFSKALTVVLRPYISVKYPE 395
+ + + + VK K KL D L++K + +AL VL K P
Sbjct: 369 PTYFRYFQRGQSEKPSKDDYLVKEKKGLKLTRHDKLLKKFRHKEALVSVLEE----KKPA 424
Query: 396 KTTAVIQELLRREVLRVAIENLEEKFIGLLLKFLISKLGETRFTRTIVDATNVFIDIFEG 455
AV++EL+ R L + N+EE +G+LL FL R++ ++ T + E
Sbjct: 425 NVVAVMEELVARRKLMKCVSNMEEGELGMLLGFLQRYCTVQRYSGLLMGLTK---KVLET 481
Query: 456 KINMFSPENLY--LYKCLFKRVESEIKVCKSIAELEGAINLIM 496
+ +N + L + L + V EI++ +S+ E++G I +M
Sbjct: 482 RAEDIKGKNEFKGLLRNLKREVNQEIRIQQSLLEIQGVIAPLM 524
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 97.5 bits (232), Expect = 2e-20
Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 13/259 (5%)
Query: 72 VTKVVAKNISKFVEAAYGGC----FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTG 127
V + + + A GGC F + L G ++ AVK++D S +++ G G
Sbjct: 215 VESTIPSTCANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLG 274
Query: 128 PVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSG 187
+ T D +I+ + ++ +WD+S+ HTD + A S S ++S
Sbjct: 275 NILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSA 334
Query: 188 SYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTE--IKVWDIFNGGKLL 245
+YD T+KL+D TV S + + L G+ + +G + +++WDI GKLL
Sbjct: 335 AYDRTIKLWDLHKGYCTNTVLFTSNC-NAICLSIDGLTVFSGHMDGNLRLWDI-QTGKLL 392
Query: 246 SNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFP-NAILS----MA 300
S ++ H VT++ L+ N +R++++ D ++D T ++ + N + S
Sbjct: 393 SEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSC 452
Query: 301 ISEHDDILTVGMMDGIISI 319
IS DD + G DG + +
Sbjct: 453 ISPDDDYVAAGSADGSVHV 471
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 95.5 bits (227), Expect = 8e-20
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 14/252 (5%)
Query: 80 ISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQS--KNVLRVFTGHTGPVHRTFFTKD 137
+S A Y F G L+ +G + + L+ V KN + V GH + +T D
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFM-VLKGHKNAILDLHWTSD 107
Query: 138 QLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYD 197
+I+S S DK+V WD+ T ++I EH+ ++ + + P +I+SGS D T KL+D
Sbjct: 108 GSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWD 167
Query: 198 CRSNETIMTVNHGSPVESTLFLPSGG-IFISAGGTEIKVWDIFNGGKLLSNISQHHKTVT 256
R I T + + F + IF ++KVWD+ G+ + H T+T
Sbjct: 168 MRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDL-RKGEATMTLEGHQDTIT 226
Query: 257 TLRLASNNSRLMSASLDRHVKIYDVSTF-------KVV--HNIDFPNAILSMAISEHDDI 307
+ L+ + S L++ +D + ++D+ + K+ H +F +L + S
Sbjct: 227 GMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTK 286
Query: 308 LTVGMMDGIISI 319
+T G D ++ I
Sbjct: 287 VTAGSSDRMVHI 298
Score = 42.3 bits (95), Expect = 8e-04
Identities = 42/206 (20%), Positives = 85/206 (41%), Gaps = 8/206 (3%)
Query: 119 LRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE-ERIANFNEHTDYIRAGAAS 177
+ + +GH V+ F I S S D+ + LW + + + H + I +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105
Query: 178 PISPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPVESTLFLPSGGIFISAGGTE--IK 234
I+ S S D TV+ +D + + I + H S V S G I +G + K
Sbjct: 106 SDGSQIV-SASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAK 164
Query: 235 VWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNID-FP 293
+WD+ G + + ++ +T + + ++ + +D VK++D+ + ++
Sbjct: 165 LWDMRQRGAIQTFPDKYQ--ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQ 222
Query: 294 NAILSMAISEHDDILTVGMMDGIISI 319
+ I M++S L MD + +
Sbjct: 223 DTITGMSLSPDGSYLLTNGMDNKLCV 248
Score = 37.5 bits (83), Expect = 0.022
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
DG + AG + V ++D S+ + GHTG V+ F + I S S DK++ L +
Sbjct: 283 DGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGE 342
Query: 155 I 155
I
Sbjct: 343 I 343
Score = 32.7 bits (71), Expect = 0.62
Identities = 33/159 (20%), Positives = 59/159 (37%), Gaps = 9/159 (5%)
Query: 45 IDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIE 104
I + FS F V+V+D + + G DG L+
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 105 EAAVKLFDVQ----SKNVLRVFTGHTGPVHRTF----FTKDQLKIISYSDDKSVGLWDIS 156
+ + ++D++ +++F GH + ++ D K+ + S D+ V +WD +
Sbjct: 243 DNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTT 302
Query: 157 TEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKL 195
+ I HT + P P II S S D + L
Sbjct: 303 SRRTIYKLPGHTGSVNECVFHPTEP-IIGSCSSDKNIYL 340
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 95.1 bits (226), Expect = 1e-19
Identities = 54/201 (26%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKN-----VLRVFTGHTGPVHRTFFTKDQLKIISYSD 146
F +DGRLL + + ++ + + + N ++ FTGH + F+ D I+S SD
Sbjct: 32 FSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASD 91
Query: 147 DKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMT 206
DK++ LWD+ T I HT+Y +P S ++I+SGS+D TV+++D + + +
Sbjct: 92 DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQS-NMIVSGSFDETVRIWDVTTGKCLKV 150
Query: 207 V-NHGSPVESTLFLPSGGIFISAGGTEI-KVWDIFNGGKLLSNISQHHKTVTTLRLASNN 264
+ H PV + F G + +S+ + ++WD G + + I + V+ +R + N
Sbjct: 151 LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG 210
Query: 265 SRLMSASLDRHVKIYDVSTFK 285
++ +LD ++++++S+ K
Sbjct: 211 KFILVGTLDNTLRLWNISSAK 231
Score = 87.0 bits (206), Expect = 3e-17
Identities = 57/271 (21%), Positives = 133/271 (49%), Gaps = 12/271 (4%)
Query: 59 AATCSVRVQVYDPVTKVVAKNISKFVEAAYG---GCFRADGRLLVAGIEEAAVKLFDVQS 115
+A ++R + + +A+ + +F G F +D R +V+ ++ +KL+DV++
Sbjct: 43 SADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVET 102
Query: 116 KNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGA 175
++++ GHT F I+S S D++V +WD++T + + H+D + A
Sbjct: 103 GSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVD 162
Query: 176 ASPISPDIILSGSYDHTVKLYDCRSNETIMTV--NHGSPVESTLFLPSGG-IFISAGGTE 232
+ +I+S SYD +++D + + T+ + PV F P+G I +
Sbjct: 163 FNR-DGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNT 221
Query: 233 IKVWDIFNGGKLLSNISQH---HKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHN 289
+++W+I + K L + H +++ +N R++S S D V ++++++ K++
Sbjct: 222 LRLWNI-SSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQK 280
Query: 290 ID-FPNAILSMAISEHDDILTVGMMDGIISI 319
++ ++++A ++++ G +D + I
Sbjct: 281 LEGHTETVMNVACHPTENLIASGSLDKTVRI 311
Score = 71.7 bits (168), Expect = 1e-12
Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 8/236 (3%)
Query: 50 FSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVK 109
FS + +A+ ++++D T + K + A+ F ++V+G + V+
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 110 LFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIAN-FNEHT 168
++DV + L+V H+ PV F +D I+S S D +WD T + ++
Sbjct: 139 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 198
Query: 169 DYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMT----VNHGSPVESTLFLPSGGI 224
+ SP + IL G+ D+T++L++ S + + T VN + S + +G
Sbjct: 199 PPVSFVRFSP-NGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKR 257
Query: 225 FISAGGTE-IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIY 279
+S + +W++ N KLL + H +TV + + + S SLD+ V+I+
Sbjct: 258 IVSGSEDNCVHMWEL-NSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 63.7 bits (148), Expect = 3e-10
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 11/209 (5%)
Query: 120 RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST-----EERIANFNEHTDYIRAG 174
+ T H V F+ D + S S DK++ + I+T E + F H + I +
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGI-SD 76
Query: 175 AASPISPDIILSGSYDHTVKLYDCRSNETIMT-VNHGSPVESTLFLPSGGIFISAGGTE- 232
A I+S S D T+KL+D + I T + H + F P + +S E
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDET 136
Query: 233 IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHN-ID 291
+++WD+ GK L + H VT + + S ++S+S D +I+D T V ID
Sbjct: 137 VRIWDV-TTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLID 195
Query: 292 FPNAILS-MAISEHDDILTVGMMDGIISI 319
N +S + S + + VG +D + +
Sbjct: 196 DENPPVSFVRFSPNGKFILVGTLDNTLRL 224
Score = 45.6 bits (103), Expect = 8e-05
Identities = 37/194 (19%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
Query: 48 LDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAA 107
++F+P + + V+++D T K + + F DG L+V+ +
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGL 178
Query: 108 VKLFDVQSKNVLR-VFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNE 166
+++D + + ++ + PV F+ + I+ + D ++ LW+IS+ + + +
Sbjct: 179 CRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTG 238
Query: 167 HTD--YIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPVESTLFLPSGG 223
H + Y + A S + I+SGS D+ V +++ S + + + H V + P+
Sbjct: 239 HVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTEN 298
Query: 224 IFISAG-GTEIKVW 236
+ S +++W
Sbjct: 299 LIASGSLDKTVRIW 312
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 87.0 bits (206), Expect = 3e-17
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 5/212 (2%)
Query: 102 GIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERI 161
G + +K++DV + + TGH G V + + S DDK V WD+ + I
Sbjct: 188 GSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVI 247
Query: 162 ANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPS 221
+++ H + A P + D++L+G D +++D R+ I + H S V S L P+
Sbjct: 248 RSYHGHLHGVYCLALHP-TLDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPT 306
Query: 222 G-GIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYD 280
+ + + IK WD+ GK ++ I+ H KTV + L + +SAS D ++K +
Sbjct: 307 DPQVITGSHDSTIKFWDL-RYGKSMATITNHKKTVRAMALHPKENDFVSASAD-NIKKFS 364
Query: 281 VSTFKVVHN-IDFPNAILSMAISEHDDILTVG 311
+ + HN + I++ D ++ G
Sbjct: 365 LPKGEFCHNMLSLQRDIINAVAVNEDGVMVTG 396
Score = 49.6 bits (113), Expect = 5e-06
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 6/200 (3%)
Query: 120 RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPI 179
RV GH G V F + S D+++ +WD++T H +R G A
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVR-GLAVSN 222
Query: 180 SPDIILSGSYDHTVKLYDCRSNETIMTVN-HGSPVESTLFLPSGGIFISAGGTEI-KVWD 237
+ S D VK +D N+ I + + H V P+ + ++ G + +VWD
Sbjct: 223 RHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWD 282
Query: 238 IFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNI-DFPNAI 296
I K+ + H V ++ + ++++ S D +K +D+ K + I + +
Sbjct: 283 IRT--KMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTV 340
Query: 297 LSMAISEHDDILTVGMMDGI 316
+MA+ ++ D I
Sbjct: 341 RAMALHPKENDFVSASADNI 360
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 85.8 bits (203), Expect = 6e-17
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 5/212 (2%)
Query: 97 RLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS 156
RL + G ++ V L+ + L GHT V F ++ +++ + + LWD+
Sbjct: 29 RLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVE 88
Query: 157 TEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPVES 215
+ + F H A P + + SGS D +K++D R I T H + +
Sbjct: 89 EAKMVRAFTGHRSNCSAVEFHPFG-EFLASGSSDANLKIWDIRKKGCIQTYKGHSRGIST 147
Query: 216 TLFLPSGGIFISAG-GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDR 274
F P G +S G +KVWD+ GKLL H + +L L + S DR
Sbjct: 148 IRFTPDGRWVVSGGLDNVVKVWDL-TAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADR 206
Query: 275 HVKIYDVSTFKVVHNIDFPNAILSMAISEHDD 306
VK +D+ TF+++ + P A +I H D
Sbjct: 207 TVKFWDLETFELIGSTR-PEATGVRSIKFHPD 237
Score = 68.5 bits (160), Expect = 1e-11
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 2/207 (0%)
Query: 31 KKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGG 90
K L L A+D + F E A S ++++D + + +
Sbjct: 47 KPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAV 106
Query: 91 CFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSV 150
F G L +G +A +K++D++ K ++ + GH+ + FT D ++S D V
Sbjct: 107 EFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVV 166
Query: 151 GLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETI-MTVNH 209
+WD++ + + F H IR+ P+ ++ +GS D TVK +D + E I T
Sbjct: 167 KVWDLTAGKLLHEFKFHEGPIRSLDFHPLE-FLLATGSADRTVKFWDLETFELIGSTRPE 225
Query: 210 GSPVESTLFLPSGGIFISAGGTEIKVW 236
+ V S F P G +KV+
Sbjct: 226 ATGVRSIKFHPDGRTLFCGLDDSLKVY 252
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 83.8 bits (198), Expect = 3e-16
Identities = 62/237 (26%), Positives = 112/237 (47%), Gaps = 12/237 (5%)
Query: 93 RADGRLLVAGIEEAAVKLFD--VQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSV 150
R D ++G + VK++D ++ + GHTG V + D+ KI+S SDD SV
Sbjct: 864 REDAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRA--ISSDRGKIVSGSDDLSV 921
Query: 151 GLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNH- 209
+WD T + + H + +S + +L+ ++D TVK++D R++ + TV
Sbjct: 922 IVWDKQTTQLLEELKGHDSQV--SCVKMLSGERVLTAAHDGTVKMWDVRTDMCVATVGRC 979
Query: 210 GSPVESTLFLPSGGIFISAG-GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLM 268
S + S + S GI +AG T +WDI GK + + H K + ++R+ + L+
Sbjct: 980 SSAILSLEYDDSTGILAAAGRDTVANIWDI-RSGKQMHKLKGHTKWIRSIRMVEDT--LI 1036
Query: 269 SASLDRHVKIYDVSTFKVVHNID-FPNAILSMAISEHDDILTVGMMDGIISIRKREE 324
+ S D +++ VS + + S+ S D + G DG++ + +E
Sbjct: 1037 TGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDE 1093
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 83.4 bits (197), Expect = 3e-16
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 7/197 (3%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
GHT PV F +++ +++ + + LWD+ + + F H A P +
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG-EF 63
Query: 184 ILSGSYDHTVKLYDCRSNETIMTV-NHGSPVESTLFLPSGGIFISAG-GTEIKVWDIFNG 241
+ SGS D ++++D R I T H + + F P G +S G +KVWD+
Sbjct: 64 LASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL-TA 122
Query: 242 GKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAI 301
GKLL H + +L L + S DR VK +D+ TF+++ P A AI
Sbjct: 123 GKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELI-GTTRPEATGVRAI 181
Query: 302 SEHDD--ILTVGMMDGI 316
+ H D L G+ DG+
Sbjct: 182 AFHPDGQTLFCGLDDGL 198
Score = 59.7 bits (138), Expect = 5e-09
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F ++ L++AG +KL+D++ ++R FTGH F + S S D ++
Sbjct: 15 FNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLR 74
Query: 152 LWDISTEERIANFNEHTDYIRAGAASPISPD--IILSGSYDHTVKLYDCRSNETIMTVN- 208
+WD + I + HT R + SPD ++SG D+ VK++D + + +
Sbjct: 75 VWDTRKKGCIQTYKGHT---RGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKC 131
Query: 209 HGSPVESTLFLPSGGIFISAGGTE--IKVWDI 238
H P+ S F P ++ G + +K WD+
Sbjct: 132 HEGPIRSLDFHPL-EFLLATGSADRTVKFWDL 162
Score = 50.8 bits (116), Expect = 2e-06
Identities = 32/131 (24%), Positives = 57/131 (43%)
Query: 48 LDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAA 107
++F P + + + ++V+D K + F DGR +V+G +
Sbjct: 55 VEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNV 114
Query: 108 VKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEH 167
VK++D+ + +L F H GP+ F + + + S D++V WD+ T E I
Sbjct: 115 VKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPE 174
Query: 168 TDYIRAGAASP 178
+RA A P
Sbjct: 175 ATGVRAIAFHP 185
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 83.0 bits (196), Expect = 4e-16
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 4/197 (2%)
Query: 93 RADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGL 152
R R+LV G E+ V L+ + N + GH+ + F ++ + + + ++ L
Sbjct: 26 RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKL 85
Query: 153 WDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN-HGS 211
WD+ + + H + P + SGS D +K++D R I T H
Sbjct: 86 WDLEEAKIVRTLTGHRSNCISVDFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 144
Query: 212 PVESTLFLPSGGIFISAGGTEI-KVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSA 270
V F P G +S G I KVWD+ GKLL+ H + +L + L +
Sbjct: 145 GVNVLRFTPDGRWVVSGGEDNIVKVWDL-TAGKLLTEFKSHEGQIQSLDFHPHEFLLATG 203
Query: 271 SLDRHVKIYDVSTFKVV 287
S DR VK +D+ TF+++
Sbjct: 204 SADRTVKFWDLETFELI 220
Score = 53.6 bits (123), Expect = 3e-07
Identities = 31/131 (23%), Positives = 59/131 (45%)
Query: 48 LDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAA 107
+DF P ++ + + ++++D K F DGR +V+G E+
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNI 166
Query: 108 VKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEH 167
VK++D+ + +L F H G + F + + + S D++V WD+ T E I +
Sbjct: 167 VKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPE 226
Query: 168 TDYIRAGAASP 178
T +R + +P
Sbjct: 227 TAGVRCLSFNP 237
Score = 51.6 bits (118), Expect = 1e-06
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F A L+ AG +KL+D++ ++R TGH F S S D ++
Sbjct: 67 FDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
Query: 152 LWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV-NHG 210
+WDI + I + HT + +P ++SG D+ VK++D + + + +H
Sbjct: 127 IWDIRKKGCIHTYKGHTRGVNVLRFTP-DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185
Query: 211 SPVESTLFLPSGGIFISAGGTE--IKVWDI 238
++S F P ++ G + +K WD+
Sbjct: 186 GQIQSLDFHPH-EFLLATGSADRTVKFWDL 214
Score = 46.0 bits (104), Expect = 6e-05
Identities = 29/132 (21%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Query: 160 RIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPVESTLF 218
++ F H+ + S ++++G DH V L+ I+++ H S ++S F
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF 67
Query: 219 LPSGGIFISAGGTE--IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHV 276
+ + ++AG IK+WD+ K++ ++ H ++ S SLD ++
Sbjct: 68 -DASEVLVAAGAASGTIKLWDL-EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
Query: 277 KIYDVSTFKVVH 288
KI+D+ +H
Sbjct: 126 KIWDIRKKGCIH 137
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 83.0 bits (196), Expect = 4e-16
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 4/197 (2%)
Query: 93 RADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGL 152
R R+LV G E+ V L+ + N + GH+ + F ++ + + + ++ L
Sbjct: 26 RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKL 85
Query: 153 WDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN-HGS 211
WD+ + + H + P + SGS D +K++D R I T H
Sbjct: 86 WDLEEAKIVRTLTGHRSNCISVDFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 144
Query: 212 PVESTLFLPSGGIFISAGGTEI-KVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSA 270
V F P G +S G I KVWD+ GKLL+ H + +L + L +
Sbjct: 145 GVNVLRFTPDGRWVVSGGEDNIVKVWDL-TAGKLLTEFKSHEGQIQSLDFHPHEFLLATG 203
Query: 271 SLDRHVKIYDVSTFKVV 287
S DR VK +D+ TF+++
Sbjct: 204 SADRTVKFWDLETFELI 220
Score = 53.6 bits (123), Expect = 3e-07
Identities = 31/131 (23%), Positives = 59/131 (45%)
Query: 48 LDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAA 107
+DF P ++ + + ++++D K F DGR +V+G E+
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNI 166
Query: 108 VKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEH 167
VK++D+ + +L F H G + F + + + S D++V WD+ T E I +
Sbjct: 167 VKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPE 226
Query: 168 TDYIRAGAASP 178
T +R + +P
Sbjct: 227 TAGVRCLSFNP 237
Score = 51.6 bits (118), Expect = 1e-06
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F A L+ AG +KL+D++ ++R TGH F S S D ++
Sbjct: 67 FDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
Query: 152 LWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV-NHG 210
+WDI + I + HT + +P ++SG D+ VK++D + + + +H
Sbjct: 127 IWDIRKKGCIHTYKGHTRGVNVLRFTP-DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185
Query: 211 SPVESTLFLPSGGIFISAGGTE--IKVWDI 238
++S F P ++ G + +K WD+
Sbjct: 186 GQIQSLDFHPH-EFLLATGSADRTVKFWDL 214
Score = 46.0 bits (104), Expect = 6e-05
Identities = 29/132 (21%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Query: 160 RIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPVESTLF 218
++ F H+ + S ++++G DH V L+ I+++ H S ++S F
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF 67
Query: 219 LPSGGIFISAGGTE--IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHV 276
+ + ++AG IK+WD+ K++ ++ H ++ S SLD ++
Sbjct: 68 -DASEVLVAAGAASGTIKLWDL-EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
Query: 277 KIYDVSTFKVVH 288
KI+D+ +H
Sbjct: 126 KIWDIRKKGCIH 137
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 80.2 bits (189), Expect = 3e-15
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 6/229 (2%)
Query: 60 ATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVL 119
A S V +Y P + K + A F DG LL + + + L+ + +++
Sbjct: 21 AGTSGNVPIYKPYRHL--KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLI 78
Query: 120 RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI-STEERIANFNEHTDYIRAGAASP 178
+ GH+ + ++ D S SDD ++ +WD S E + HT+++ +P
Sbjct: 79 HRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNP 138
Query: 179 ISPDIILSGSYDHTVKLYDCRSNETIMTVN-HGSPVESTLFLPSGGIFISAG-GTEIKVW 236
S ++I+SGS+D T+++++ ++ + + + H P+ S F G + +SA K+W
Sbjct: 139 PS-NLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Query: 237 DIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFK 285
D G L + I V+ + + N ++ A+LD +K+ + +T K
Sbjct: 198 DAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGK 246
Score = 50.4 bits (115), Expect = 3e-06
Identities = 42/197 (21%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F L+V+G + +++++V++ +R+ H+ P+ F +D I+S S D S
Sbjct: 136 FNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCK 195
Query: 152 LWDISTEERIANFNEHTDYIRAGAASPISPD--IILSGSYDHTVKLYDCRSNETI-MTVN 208
+WD + + D A + + SP+ IL + D T+KL + + + + +
Sbjct: 196 IWDAKEGTCLKTLID--DKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTG 253
Query: 209 HGSPV--ESTLFLPSGGIFISAGGTE--IKVWDIFNGGKLLSNISQHHKTVTTLRLASNN 264
H + V ++ F + G +I +G + + +WD+ +L + H V ++
Sbjct: 254 HTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDL-QARNILQRLEGHTDAVISVSCHPVQ 312
Query: 265 SRLMSAS--LDRHVKIY 279
+ + S+ LD+ ++I+
Sbjct: 313 NEISSSGNHLDKTIRIW 329
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 79.0 bits (186), Expect = 7e-15
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 4/197 (2%)
Query: 93 RADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGL 152
R R+LV G E+ V L+ + N + GH+ + F + + + + ++ L
Sbjct: 119 RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKL 178
Query: 153 WDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN-HGS 211
WD+ + + H + P + SGS D +K++D R I T H
Sbjct: 179 WDLEEAKVVRTLTGHRSNCVSVNFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 237
Query: 212 PVESTLFLPSGGIFISAGGTEI-KVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSA 270
V F P G +S G + KVWD+ GKLL H + +L + L +
Sbjct: 238 GVNVLRFTPDGRWIVSGGEDNVVKVWDL-TAGKLLHEFKSHEGKIQSLDFHPHEFLLATG 296
Query: 271 SLDRHVKIYDVSTFKVV 287
S D+ VK +D+ TF+++
Sbjct: 297 SADKTVKFWDLETFELI 313
Score = 63.7 bits (148), Expect = 3e-10
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 6/184 (3%)
Query: 25 HDIIYWKKLGLP-VLVKEFG---AIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNI 80
H + W +G P ++ +G ID + F E A S ++++D V + +
Sbjct: 132 HKVNLWA-IGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTL 190
Query: 81 SKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLK 140
+ F G +G + +K++D++ K + + GHT V+ FT D
Sbjct: 191 TGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRW 250
Query: 141 IISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRS 200
I+S +D V +WD++ + + F H I++ P ++ +GS D TVK +D +
Sbjct: 251 IVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHP-HEFLLATGSADKTVKFWDLET 309
Query: 201 NETI 204
E I
Sbjct: 310 FELI 313
Score = 54.4 bits (125), Expect = 2e-07
Identities = 31/137 (22%), Positives = 60/137 (43%)
Query: 48 LDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAA 107
++F P ++ + + ++++D K F DGR +V+G E+
Sbjct: 200 VNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNV 259
Query: 108 VKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEH 167
VK++D+ + +L F H G + F + + + S DK+V WD+ T E I +
Sbjct: 260 VKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTE 319
Query: 168 TDYIRAGAASPISPDII 184
T +R +P ++
Sbjct: 320 TTGVRCLTFNPDGKSVL 336
Score = 47.6 bits (108), Expect = 2e-05
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 180 SPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPVESTLFLPSGGIFIS--AGGTEIKVW 236
S ++++G DH V L+ I+++ H S ++S F S G+ + A GT IK+W
Sbjct: 121 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGT-IKLW 179
Query: 237 DIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVH 288
D+ K++ ++ H ++ S SLD ++KI+D+ +H
Sbjct: 180 DL-EEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIH 230
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 77.8 bits (183), Expect = 2e-14
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 8/220 (3%)
Query: 102 GIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERI 161
G + +K++DV + + TGH V + + S DDK V WD+ + I
Sbjct: 194 GSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVI 253
Query: 162 ANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN-HGSPVESTLFLP 220
+++ H + A P + D++L+G D +++D R+ I ++ H + V S P
Sbjct: 254 RSYHGHLSGVYCLALHP-TLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRP 312
Query: 221 SG-GIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIY 279
+ + + T IK WD+ GK +S ++ H K+V + L + SAS D + K +
Sbjct: 313 TDPQVVTGSHDTTIKFWDL-RYGKTMSTLTHHKKSVRAMTLHPKENAFASASAD-NTKKF 370
Query: 280 DVSTFKVVHNI--DFPNAILSMAISEHDDILTVGMMDGII 317
+ + HN+ I +MA++E D ++ G +G I
Sbjct: 371 SLPKGEFCHNMLSQQKTIINAMAVNE-DGVMVTGGDNGSI 409
Score = 71.3 bits (167), Expect = 1e-12
Identities = 49/233 (21%), Positives = 101/233 (43%), Gaps = 4/233 (1%)
Query: 37 VLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADG 96
V+ G + + F P ++ + ++++D T V+ ++ +E G
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRH 230
Query: 97 RLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS 156
+ + ++ VK +D++ V+R + GH V+ +++ D +WDI
Sbjct: 231 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIR 290
Query: 157 TEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPVES 215
T+ +I + H + + + P P ++ +GS+D T+K +D R +T+ T+ +H V +
Sbjct: 291 TKMQIFALSGHDNTVCSVFTRPTDPQVV-TGSHDTTIKFWDLRYGKTMSTLTHHKKSVRA 349
Query: 216 TLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLM 268
P F SA K + + G+ N+ KT+ +A N +M
Sbjct: 350 MTLHPKENAFASASADNTKKFSL-PKGEFCHNMLSQQKTIIN-AMAVNEDGVM 400
Score = 56.4 bits (130), Expect = 4e-08
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Query: 120 RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPI 179
RV GH G V F + S D+++ +WD++T H + +R G A
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVR-GLAVSN 228
Query: 180 SPDIILSGSYDHTVKLYDCRSNETIMTVN-HGSPVESTLFLPSGGIFISAGGTEI-KVWD 237
+ S D VK +D N+ I + + H S V P+ + ++ G + +VWD
Sbjct: 229 RHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWD 288
Query: 238 IFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNI 290
I ++ + +S H TV ++ + ++++ S D +K +D+ K + +
Sbjct: 289 IRTKMQIFA-LSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTL 340
Score = 47.6 bits (108), Expect = 2e-05
Identities = 34/187 (18%), Positives = 77/187 (41%), Gaps = 2/187 (1%)
Query: 56 YYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQS 115
Y F+A +V+ +D V ++ + Y +L+ G ++ +++D+++
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRT 291
Query: 116 KNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGA 175
K + +GH V F ++++ S D ++ WD+ + ++ H +RA
Sbjct: 292 KMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMT 351
Query: 176 ASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGT-EIK 234
P + S S D+T K + ++ + + + + G+ ++ G I
Sbjct: 352 LHP-KENAFASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGGDNGSIW 410
Query: 235 VWDIFNG 241
WD +G
Sbjct: 411 FWDWKSG 417
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 74.5 bits (175), Expect = 2e-13
Identities = 62/326 (19%), Positives = 142/326 (43%), Gaps = 10/326 (3%)
Query: 48 LDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAA 107
+D P EP+ A+ S + +++ T+V+AK+ F A + +VAG ++
Sbjct: 21 VDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMY 80
Query: 108 VKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIAN-FNE 166
+++++ + + ++VF H+ + ++S SDD + LWD F
Sbjct: 81 IRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEG 140
Query: 167 HTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN-HGSPVESTLFLPSGG-I 224
H+ Y+ +P + S S D T+K+++ S + T++ H V + G
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
Query: 225 FISAGGTE--IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVS 282
++ G + KVWD + + + H V+ + +++ S D V+I+ +
Sbjct: 201 YLITGSDDHTAKVWD-YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHAT 259
Query: 283 TFKVVHNIDFP-NAILSMAISEHDDILTVGMMDGIISIR-KREEPVRQSEKRKNLLKFIP 340
T+++ + +++ + ++ + + +G +G I ++ RE PV + ++
Sbjct: 260 TYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGREIPVASMDNTGKII--WA 317
Query: 341 DHTSQTKADTVEVANEVKINKKQKLP 366
H A+ + + ++ ++LP
Sbjct: 318 KHNEIQTANIKSIGADYEVTDGERLP 343
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 72.9 bits (171), Expect = 5e-13
Identities = 53/203 (26%), Positives = 108/203 (53%), Gaps = 10/203 (4%)
Query: 94 ADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 153
+DG+ ++G + ++L+D+ + R F GHT V F+ D +I+S S D+++ LW
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 154 DISTEER--IANFNEHTDYIRAGAASP--ISPDIILSGSYDHTVKLYDCRSNETIMTVNH 209
+ E + I+ + H +++ SP + P I+ S S+D TVK+++ ++ + T+
Sbjct: 133 NTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIV-SASWDKTVKVWNLQNCKLRNTLAG 191
Query: 210 GSPVESTLFLPSGGIFISAGGTE--IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRL 267
S +T+ + G ++GG + I +WD+ G KL S + + +L + N L
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYS--LEAGSIIHSLCFSPNRYWL 249
Query: 268 MSASLDRHVKIYDVSTFKVVHNI 290
+A+ + ++I+D+ + VV ++
Sbjct: 250 CAAT-ENSIRIWDLESKSVVEDL 271
Score = 58.0 bits (134), Expect = 1e-08
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 12/188 (6%)
Query: 141 IISYSDDKSVGLWDISTEER---IA--NFNEHTDYIRAGAASPISPDIILSGSYDHTVKL 195
I++ S DKS+ LW ++ E++ +A H+ +++ S LSGS+D ++L
Sbjct: 31 IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS-DGQFALSGSWDGELRL 89
Query: 196 YDCRSNE-TIMTVNHGSPVESTLFLPSGGIFISAG-GTEIKVWDIFNGGK-LLSNISQHH 252
+D + E T V H V S F +SA IK+W+ K +S H
Sbjct: 90 WDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHK 149
Query: 253 KTVTTLRLASNN--SRLMSASLDRHVKIYDVSTFKVVHNIDFPNAIL-SMAISEHDDILT 309
+ V+ +R + N ++SAS D+ VK++++ K+ + + + L ++A+S +
Sbjct: 150 EWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCA 209
Query: 310 VGMMDGII 317
G DG+I
Sbjct: 210 SGGKDGVI 217
Score = 56.8 bits (131), Expect = 3e-08
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Query: 120 RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPI 179
R TGH+ V + D +S S D + LWD++T E F HT + + A S
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTD 116
Query: 180 SPDIILSGSYDHTVKLYDC--RSNETIMTVN-HGSPVESTLFLPSGGI--FISAGGTE-I 233
+ I+ S S D T+KL++ TI + H V F P+ + +SA + +
Sbjct: 117 NRQIV-SASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTV 175
Query: 234 KVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFP 293
KVW++ N KL + ++ H + T+ ++ + S S D + ++D++ K +++++
Sbjct: 176 KVWNLQN-CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG 234
Query: 294 NAILSMAIS 302
+ I S+ S
Sbjct: 235 SIIHSLCFS 243
Score = 44.4 bits (100), Expect = 2e-04
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Query: 167 HTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV------NHGSPVESTLFLP 220
HTD + A A + D+I++ S D ++ L+ + V H V+ + L
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVV-LS 72
Query: 221 SGGIFISAGG--TEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKI 278
S G F +G E+++WD+ G + H K V ++ +++N +++SAS DR +K+
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGESTRRFVG-HTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Query: 279 YD 280
++
Sbjct: 132 WN 133
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 72.5 bits (170), Expect = 6e-13
Identities = 55/205 (26%), Positives = 104/205 (50%), Gaps = 14/205 (6%)
Query: 94 ADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 153
+DG+ ++G + ++L+D+ + R F GHT V F+ D +I+S S D+++ LW
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 154 DISTEER--IANFNEHTDYIRAGAASP--ISPDIILSGSYDHTVK---LYDCRSNETIMT 206
+ E + I+ + H +++ SP + P I+ S S+D TVK L +C+ ++
Sbjct: 133 NTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIV-SASWDKTVKVWNLQNCKLRNSL-- 189
Query: 207 VNHGSPVESTLFLPSGGIFISAG-GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNS 265
V H + + P G + S G I +WD+ G KL S + + +L + N
Sbjct: 190 VGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYS--LEAGSIIHSLCFSPNRY 247
Query: 266 RLMSASLDRHVKIYDVSTFKVVHNI 290
L +A+ + ++I+D+ + VV ++
Sbjct: 248 WLCAAT-ENSIRIWDLESKSVVEDL 271
Score = 56.4 bits (130), Expect = 4e-08
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 12/188 (6%)
Query: 141 IISYSDDKSVGLWDISTEER---IA--NFNEHTDYIRAGAASPISPDIILSGSYDHTVKL 195
I++ S DKS+ LW ++ +++ +A H+ ++ S LSGS+D ++L
Sbjct: 31 IVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSS-DGQFALSGSWDGELRL 89
Query: 196 YDCRSNETIMT-VNHGSPVESTLFLPSGGIFISAG-GTEIKVWDIFNGGK-LLSNISQHH 252
+D + ET V H V S F +SA IK+W+ K +S H
Sbjct: 90 WDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHK 149
Query: 253 KTVTTLRLASNN--SRLMSASLDRHVKIYDVSTFKVVHNIDFPNAIL-SMAISEHDDILT 309
+ V+ +R + N ++SAS D+ VK++++ K+ +++ + L ++A+S +
Sbjct: 150 EWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCA 209
Query: 310 VGMMDGII 317
G DG+I
Sbjct: 210 SGGKDGVI 217
Score = 56.0 bits (129), Expect = 6e-08
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 120 RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPI 179
R TGH+ V + D +S S D + LWD++T E F HT + + A S
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTD 116
Query: 180 SPDIILSGSYDHTVKLYDCRSNETIMTVNHGSP----VESTLFLPSGGI--FISAGGTE- 232
+ I+ S S D T+KL++ E T++ G V F P+ + +SA +
Sbjct: 117 NRQIV-SASRDRTIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKT 174
Query: 233 IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDF 292
+KVW++ N KL +++ H + T+ ++ + S S D + ++D++ K +++++
Sbjct: 175 VKVWNLQN-CKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA 233
Query: 293 PNAILSMAIS 302
+ I S+ S
Sbjct: 234 GSIIHSLCFS 243
Score = 46.0 bits (104), Expect = 6e-05
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 167 HTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV------NHGSPVESTLFLP 220
HTD + A A + DII++ S D ++ L+ ++ V H VE + L
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVV-LS 72
Query: 221 SGGIFISAGG--TEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKI 278
S G F +G E+++WD+ G+ H K V ++ +++N +++SAS DR +K+
Sbjct: 73 SDGQFALSGSWDGELRLWDLAT-GETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Query: 279 YD 280
++
Sbjct: 132 WN 133
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 72.5 bits (170), Expect = 6e-13
Identities = 54/204 (26%), Positives = 107/204 (52%), Gaps = 11/204 (5%)
Query: 94 ADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 153
+DG+ ++G + ++L+D+ + R F GHT V F+ D +I+S S D+++ LW
Sbjct: 73 SDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLW 132
Query: 154 DISTEER--IANFNE-HTDYIRAGAASP--ISPDIILSGSYDHTVKLYDCRSNETIMTVN 208
+ E + I+ E H D++ SP + P I+ S S+D TVK+++ + + T+
Sbjct: 133 NTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV-SASWDKTVKVWNLSNCKLRSTLA 191
Query: 209 HGSPVESTLFLPSGGIFISAGGTE--IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSR 266
+ ST+ + G ++GG + + +WD+ G KL S + + + L + N
Sbjct: 192 GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS--LEANSVIHALCFSPNRYW 249
Query: 267 LMSASLDRHVKIYDVSTFKVVHNI 290
L +A+ + +KI+D+ + +V ++
Sbjct: 250 LCAAT-EHGIKIWDLESKSIVEDL 272
Score = 53.6 bits (123), Expect = 3e-07
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 120 RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPI 179
R TGH+ V + D +S S D + LWD++ F HT + + A S +
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFS-L 115
Query: 180 SPDIILSGSYDHTVKLY----DCRSNETIMTVNHGSPVESTLFLPS--GGIFISAGGTE- 232
I+S S D T+KL+ +C+ + H V F P+ +SA +
Sbjct: 116 DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKT 175
Query: 233 IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDF 292
+KVW++ N KL S ++ H V+T+ ++ + S S D V ++D++ K +++++
Sbjct: 176 VKVWNLSN-CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA 234
Query: 293 PNAILSMAISEHDDILTVGMMDGI 316
+ I ++ S + L GI
Sbjct: 235 NSVIHALCFSPNRYWLCAATEHGI 258
Score = 51.6 bits (118), Expect = 1e-06
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 13/189 (6%)
Query: 141 IISYSDDKSVGLWDISTEERI-----ANFNEHTDYIRAGAASPISPDIILSGSYDHTVKL 195
I+S S DKS+ LW ++ +++ H+ ++ S LSGS+D ++L
Sbjct: 31 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS-DGQFALSGSWDGELRL 89
Query: 196 YDCRSN-ETIMTVNHGSPVESTLF-LPSGGIFISAGGTEIKVWDIFNGGK-LLSNISQHH 252
+D + T V H V S F L + I ++ IK+W+ K +S + H
Sbjct: 90 WDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGH 149
Query: 253 KT-VTTLRLASNNSR--LMSASLDRHVKIYDVSTFKVVHNI-DFPNAILSMAISEHDDIL 308
+ V+ +R + N + ++SAS D+ VK++++S K+ + + ++A+S +
Sbjct: 150 RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLC 209
Query: 309 TVGMMDGII 317
G DG++
Sbjct: 210 ASGGKDGVV 218
Score = 45.2 bits (102), Expect = 1e-04
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Query: 167 HTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV------NHGSPVESTLFLP 220
HTD + A A + DII+S S D ++ L+ ++ V H VE + L
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVV-LS 72
Query: 221 SGGIFISAGG--TEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKI 278
S G F +G E+++WD+ G + H K V ++ + +N +++SAS DR +K+
Sbjct: 73 SDGQFALSGSWDGELRLWDLAAGVSTRRFVG-HTKDVLSVAFSLDNRQIVSASRDRTIKL 131
Query: 279 YD 280
++
Sbjct: 132 WN 133
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 72.1 bits (169), Expect = 8e-13
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTK-DQLKIISYSDDKSVGLW 153
+G+ L G + + +FDV +L GH PV F+ D + S SDD V +
Sbjct: 169 NGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMH 228
Query: 154 DISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSP 212
D + + + + HT ++ + ASP I +GS D TV+L+D + I T+ NH
Sbjct: 229 DAEGKTLLGSMSGHTSWVLSVDASP-DGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQ 287
Query: 213 VESTLFLPSGGIFISAG 229
V S F P GG + AG
Sbjct: 288 VWSVAFRPPGGTGVRAG 304
Score = 55.6 bits (128), Expect = 8e-08
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 141 IISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRS 200
+++ S D++V LW + + H+ + A AA P S I S S D V+++D +
Sbjct: 33 LLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHP-SGIIAASSSIDSFVRVFDVDT 91
Query: 201 NETIMTVNHG-SPVESTLFLPSGGIFISAGGTE--IKVWDIFNGGKLLSNIS-------- 249
N TI + S V F P G I AGG+ +K+WD + +L+S +S
Sbjct: 92 NATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASW-RLISTLSIPRPDAPK 150
Query: 250 -----QHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPN-AILSMAISE 303
K V ++ + N RL S+D + ++DV K++H ++ N + S+ S
Sbjct: 151 PSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSP 210
Query: 304 HDD-ILTVGMMDGIISIRKRE 323
D +L G DG +++ E
Sbjct: 211 VDPRVLFSGSDDGHVNMHDAE 231
Score = 52.0 bits (119), Expect = 9e-07
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 25/240 (10%)
Query: 66 VQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLL-VAGIEEAAVKLFDVQSKNVLRVFT- 123
V+V+D T + +G F G +L VAG A+VKL+D S ++ +
Sbjct: 84 VRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSI 143
Query: 124 ---GHTGPVHRTFFTKDQL---------KIISYSDDKSVGLWDISTEERIANFNEHTDYI 171
P +T K L ++ S D ++ ++D+ + + H +
Sbjct: 144 PRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPV 203
Query: 172 RAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN-HGSPVESTLFLPSGGIFISAGG 230
R+ SP+ P ++ SGS D V ++D + +++ H S V S P GG I+ G
Sbjct: 204 RSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGA-IATGS 262
Query: 231 TE--IKVWDIFNGGKLLSNISQHHKTVTTLRL------ASNNSRLMSASLDRHVKIYDVS 282
++ +++WD+ + +S H+ V ++ RL S S D+ V +YD S
Sbjct: 263 SDRTVRLWDL-KMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGRLASVSDDKSVSLYDYS 321
Score = 41.5 bits (93), Expect = 0.001
Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 20/240 (8%)
Query: 98 LLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 157
LL+ G + VKL+ +++R TGH+ V + S S D V ++D+ T
Sbjct: 32 LLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDT 91
Query: 158 EERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSP----- 212
IA + P + ++G +VKL+D S I T++ P
Sbjct: 92 NATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKP 151
Query: 213 ---------VESTLFLPSGGIFI--SAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLA 261
V S + P+G S GT I V+D+ + KLL + H+ V +L +
Sbjct: 152 SDKTSSKKFVLSVAWSPNGKRLACGSMDGT-ICVFDV-DRSKLLHQLEGHNMPVRSLVFS 209
Query: 262 SNNSR-LMSASLDRHVKIYDVSTFKVVHNID-FPNAILSMAISEHDDILTVGMMDGIISI 319
+ R L S S D HV ++D ++ ++ + +LS+ S + G D + +
Sbjct: 210 PVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRL 269
Score = 40.3 bits (90), Expect = 0.003
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 48 LDFSPVEP-YYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEA 106
L FSPV+P F+ + V ++D K + ++S DG + G +
Sbjct: 206 LVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDR 265
Query: 107 AVKLFDVQSKNVLRVFTGHTGPVHRTFFTKD------QLKIISYSDDKSVGLWDIS 156
V+L+D++ + ++ + H V F ++ S SDDKSV L+D S
Sbjct: 266 TVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGRLASVSDDKSVSLYDYS 321
Score = 36.3 bits (80), Expect = 0.050
Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query: 165 NEHTDYIRAGAASPISPD---IILSGSYDHTVKLYDCRSNETIMT-VNHGSPVESTLFLP 220
N H D + A P + D ++L+GS D TVKL+ + + T H V + P
Sbjct: 11 NAHEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHP 70
Query: 221 SGGIFISAG-GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRL-MSASLDRHVKI 278
SG I S+ + ++V+D+ + ++ + V ++ + L ++ VK+
Sbjct: 71 SGIIAASSSIDSFVRVFDV-DTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKL 129
Query: 279 YDVSTFKVVHNIDFPNA--------------ILSMAISEHDDILTVGMMDGIISI 319
+D ++++++ + P +LS+A S + L G MDG I +
Sbjct: 130 WDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICV 184
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 71.3 bits (167), Expect = 1e-12
Identities = 62/282 (21%), Positives = 128/282 (45%), Gaps = 17/282 (6%)
Query: 54 EPYYFAATCSVRVQVYDPVTKVVAKNIS--KFVEAAYGGCFRADGR-LLVAGIEEAAVKL 110
E + AT V+VYD T + ++ K V + C + G L+V G ++ V+L
Sbjct: 371 EQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRL 430
Query: 111 FDVQSKNVLRVFTGHTGPVHRTFFTKDQLK-IISYSDDKSVGLWDIS--TEERIANFNEH 167
++ SK+ + V TGH G + F K +S S D+++ +W + +E+ N
Sbjct: 431 WNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLK 490
Query: 168 TDYIRAGAASPI-------SPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPVESTLFL 219
T + A I + ++ +GS D T ++ ++T+ H + S F
Sbjct: 491 TRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFS 550
Query: 220 PSGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKI 278
++A G + +K+W I + G L H +V ++ ++ +S D +K+
Sbjct: 551 TVDQCVMTASGDKTVKIWAI-SDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKL 609
Query: 279 YDVSTFKVVHNID-FPNAILSMAISEHDDILTVGMMDGIISI 319
++V+T + + D + + ++A+ + +++ G D +I++
Sbjct: 610 WNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINL 651
Score = 53.6 bits (123), Expect = 3e-07
Identities = 52/193 (26%), Positives = 81/193 (41%), Gaps = 7/193 (3%)
Query: 41 EFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLV 100
E + L SP + F+A S +++V+D T ++ G A G LL
Sbjct: 59 ESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLA 118
Query: 101 AGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLK--IISYSDDKSVGLWDI--- 155
+ V ++DV F GH G V F D K +IS SDD +V +WD+
Sbjct: 119 TAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAK 178
Query: 156 STEER-IANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVE 214
+TE++ +A +H + + A S + +G D V L+D TV +E
Sbjct: 179 NTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGR-DKVVNLWDLHDYSCKATVATYEVLE 237
Query: 215 STLFLPSGGIFIS 227
+ + SG F S
Sbjct: 238 AVTTVSSGTPFAS 250
Score = 53.6 bits (123), Expect = 3e-07
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 105 EAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANF 164
+ VK++ + + L+ F GHT V R F D + +S D + LW+++T E IA +
Sbjct: 562 DKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATY 621
Query: 165 NEHTDYIRAGAASPISPDIILSGSYDHTVKLY 196
++H D + A A ++I +G D + L+
Sbjct: 622 DQHEDKVWALAVGK-KTEMIATGGGDAVINLW 652
Score = 53.2 bits (122), Expect = 4e-07
Identities = 42/189 (22%), Positives = 76/189 (40%), Gaps = 7/189 (3%)
Query: 57 YFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSK 116
+ A C + + D V I + D +LL + ++++D+++
Sbjct: 33 FIACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETL 92
Query: 117 NVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAA 176
+R + GH GPV + + D+ V +WD+ F H + +
Sbjct: 93 KCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILF 152
Query: 177 SPIS-PDIILSGSYDHTVKLYDCRSNET-----IMTVNHGSPVESTLFLPSGGIFISAGG 230
P S +I++SGS D TV+++D + T + H S V S G SAG
Sbjct: 153 HPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGR 212
Query: 231 TE-IKVWDI 238
+ + +WD+
Sbjct: 213 DKVVNLWDL 221
Score = 48.4 bits (110), Expect = 1e-05
Identities = 35/184 (19%), Positives = 79/184 (42%), Gaps = 7/184 (3%)
Query: 102 GIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERI 161
GI E + + ++++++V+ H ++ ++ + + S+D++ +W + +
Sbjct: 478 GISEDSEEPINLKTRSVV---AAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHV 534
Query: 162 ANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN-HGSPVESTLFLP 220
H I + S + +++ S D TVK++ + T H S V F+
Sbjct: 535 VTLKGHKRRIFSVEFSTVD-QCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFIT 593
Query: 221 SGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIY 279
G F+S G +K+W++ N + ++ QH V L + + + D + ++
Sbjct: 594 DGTQFVSCGADGLLKLWNV-NTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Query: 280 DVST 283
ST
Sbjct: 653 HDST 656
Score = 33.1 bits (72), Expect = 0.47
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 221 SGGIFIS-AGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIY 279
S G FI+ A G I + D + + S I T+T L L+ ++ L SA R ++++
Sbjct: 29 SDGSFIACACGDVINIVDSTDSS-VKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVW 87
Query: 280 DVSTFKVVHN 289
D+ T K + +
Sbjct: 88 DLETLKCIRS 97
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 69.7 bits (163), Expect = 4e-12
Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 21/270 (7%)
Query: 98 LLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 157
+ GI+ AV LFD S +L TGH+ V F D +++ S DK+V +W S
Sbjct: 237 IATGGIDTTAV-LFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSE 295
Query: 158 EERIAN---FNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVE 214
+ + +H+ +RA + +S S D T YD S + V S +
Sbjct: 296 DGNYTSRHTLKDHSAEVRAVTVHATN-KYFVSASLDSTWCFYDLSSGLCLAQVTDASEND 354
Query: 215 ----STLFLPSGGIFISAGGTE--IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLM 268
+ F P G+ + G + +K+WD+ + ++ H+ +T++ + N L
Sbjct: 355 VNYTAAAFHPD-GLILGTGTAQSIVKIWDVKSQAN-VAKFGGHNGEITSISFSENGYFLA 412
Query: 269 SASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISIRKREEPVRQ 328
+A+LD V+++D+ K DFP+A + +H G GI + R
Sbjct: 413 TAALD-GVRLWDLRKLKNFRTFDFPDA--NSVEFDHS-----GSYLGIAASDIRVFQAAS 464
Query: 329 SEKRKNLLKFIPDHTSQTKADTVEVANEVK 358
+ N +K +PD + KA +V+ + K
Sbjct: 465 VKAEWNPIKTLPDLSGTGKATSVKFGLDSK 494
Score = 46.4 bits (105), Expect = 5e-05
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 180 SPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPVESTLFLPSGGIFISAGGTE-IKVWD 237
S D+I +G D T L+D S + + T+ H V S F+ + ++A + +++W
Sbjct: 233 SKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWG 292
Query: 238 IFNGGKLLS--NISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNID--FP 293
G S + H V + + + N +SASLD YD+S+ + +
Sbjct: 293 CSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASE 352
Query: 294 NAILSMAISEHDD--ILTVGMMDGIISI 319
N + A + H D IL G I+ I
Sbjct: 353 NDVNYTAAAFHPDGLILGTGTAQSIVKI 380
Score = 39.1 bits (87), Expect = 0.007
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F DG +L G ++ VK++DV+S+ + F GH G + F+++ + + + D V
Sbjct: 362 FHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD-GVR 420
Query: 152 LWDISTEERIANFN 165
LWD+ + F+
Sbjct: 421 LWDLRKLKNFRTFD 434
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 68.9 bits (161), Expect = 8e-12
Identities = 67/335 (20%), Positives = 143/335 (42%), Gaps = 14/335 (4%)
Query: 48 LDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAA 107
+D P EP+ A+ S + +++ T+ + K+ F A + +VAG ++
Sbjct: 21 VDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMF 80
Query: 108 VKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIAN-FNE 166
+++++ + + ++VF H + ++S SDD + LWD F
Sbjct: 81 IRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEG 140
Query: 167 HTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN-HGSPVESTLFLPSGG-I 224
H+ Y+ +P + S S D T+K+++ S + T++ H V + G
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKP 200
Query: 225 FISAGGTE--IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVS 282
++ G + KVWD + + + H V+ + +++ S D V+I+ +
Sbjct: 201 YLITGSDDHTAKVWD-YQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHAT 259
Query: 283 TFKVVHNIDFP-NAILSMAISEHDDILTVGMMDGIISIR-KREEPVRQSEKRKNLL--KF 338
T+++ + +++ + ++ + + +G +G I ++ RE PV + ++ K
Sbjct: 260 TYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKLGREIPVASMDNSGKIIWAKH 319
Query: 339 IPDHTSQTK---ADTVEVANEVKINKKQKLPDCDV 370
HT K AD V + + K+ L CD+
Sbjct: 320 NEIHTVNIKSVGADEVTDGERLPLAVKE-LGTCDL 353
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 68.5 bits (160), Expect = 1e-11
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 4/203 (1%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
+ D +LL G ++ VK+++V S FT HT V F D ++S S D +V
Sbjct: 357 YSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVR 416
Query: 152 LWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV--NH 209
WD + + T + S D++ +G+ D + I + H
Sbjct: 417 AWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGH 476
Query: 210 GSPVESTLFLPSGGIFISAG-GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLM 268
+PV +F P + S+ +++WD+F K +H+ V T+ + +L
Sbjct: 477 EAPVHGLMFSPLTQLLASSSWDYTVRLWDVF-ASKGTVETFRHNHDVLTVAFRPDGKQLA 535
Query: 269 SASLDRHVKIYDVSTFKVVHNID 291
S++LD + +D +++ I+
Sbjct: 536 SSTLDGQINFWDTIEGVLMYTIE 558
Score = 54.8 bits (126), Expect = 1e-07
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 10/234 (4%)
Query: 92 FRADGRLLVAGIEEAAVKL-FDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSV 150
F G L G + L +D +++ + GH V+ ++ D + + +DD V
Sbjct: 314 FNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKV 373
Query: 151 GLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHG 210
+W++ + F EHT+ + A +LS S D TV+ +D + + T
Sbjct: 374 KVWNVMSGTCFITFTEHTNAVTA-LHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTP 432
Query: 211 SPVE--STLFLPSGGIFISAG---GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNS 265
+P + S PSG + + AG EI VW G++ +S H V L +
Sbjct: 433 TPRQFVSLTADPSGDV-VCAGTLDSFEIFVWS-KKTGQIKDILSGHEAPVHGLMFSPLTQ 490
Query: 266 RLMSASLDRHVKIYDVSTFK-VVHNIDFPNAILSMAISEHDDILTVGMMDGIIS 318
L S+S D V+++DV K V + +L++A L +DG I+
Sbjct: 491 LLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQIN 544
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 68.5 bits (160), Expect = 1e-11
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 4/203 (1%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
+ D +LL G ++ VK+++V S FT HT V F D ++S S D +V
Sbjct: 397 YSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVR 456
Query: 152 LWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV--NH 209
WD + + T + S D++ +G+ D + I + H
Sbjct: 457 AWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGH 516
Query: 210 GSPVESTLFLPSGGIFISAG-GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLM 268
+PV +F P + S+ +++WD+F K +H+ V T+ + +L
Sbjct: 517 EAPVHGLMFSPLTQLLASSSWDYTVRLWDVF-ASKGTVETFRHNHDVLTVAFRPDGKQLA 575
Query: 269 SASLDRHVKIYDVSTFKVVHNID 291
S++LD + +D +++ I+
Sbjct: 576 SSTLDGQINFWDTIEGVLMYTIE 598
Score = 54.8 bits (126), Expect = 1e-07
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 10/234 (4%)
Query: 92 FRADGRLLVAGIEEAAVKL-FDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSV 150
F G L G + L +D +++ + GH V+ ++ D + + +DD V
Sbjct: 354 FNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKV 413
Query: 151 GLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHG 210
+W++ + F EHT+ + A +LS S D TV+ +D + + T
Sbjct: 414 KVWNVMSGTCFITFTEHTNAVTA-LHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTP 472
Query: 211 SPVE--STLFLPSGGIFISAG---GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNS 265
+P + S PSG + + AG EI VW G++ +S H V L +
Sbjct: 473 TPRQFVSLTADPSGDV-VCAGTLDSFEIFVWS-KKTGQIKDILSGHEAPVHGLMFSPLTQ 530
Query: 266 RLMSASLDRHVKIYDVSTFK-VVHNIDFPNAILSMAISEHDDILTVGMMDGIIS 318
L S+S D V+++DV K V + +L++A L +DG I+
Sbjct: 531 LLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQIN 584
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 66.9 bits (156), Expect = 3e-11
Identities = 56/237 (23%), Positives = 108/237 (45%), Gaps = 10/237 (4%)
Query: 96 GRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 155
G +++AG E+ ++ +++ + L +F+GH V FT D I + SDD S+ +W+
Sbjct: 167 GHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNP 226
Query: 156 STEERIANFNEHTDYIRAGAASPISPD--IILSGSYDHTVKLYDCRSNETIMTVN-HGSP 212
T E I H + I+ + + +SGS D +V + + + + + ++N H
Sbjct: 227 KTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDS 286
Query: 213 VESTLFLPSGGI--FISAGGTEIK--VWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLM 268
VE F PS + GG + K +WD+ + I +H + VT+L + L
Sbjct: 287 VECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRF--ICEHEEGVTSLTWIGTSKYLA 344
Query: 269 SASLDRHVKIYDVSTFKVVHNI-DFPNAILSMAISEHDDILTVGMMDGIISIRKREE 324
+ + V I+D VH +A+ ++++S + D + +D + + E
Sbjct: 345 TGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSE 401
Score = 63.7 bits (148), Expect = 3e-10
Identities = 49/205 (23%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 90 GCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFT-----KDQLKIISY 144
G F DG+L+ G ++A++ +++ ++ + + GH P H T + IS
Sbjct: 203 GDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGH--PYHTEGLTCLDINSNSSLAISG 260
Query: 145 SDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIIL--SGSYDHTVKLYDCRSNE 202
S D SV + +I T + +++ N HTD + SP S I L +G D + ++D + +
Sbjct: 261 SKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHST 320
Query: 203 TIMTVNHGSPVESTLFLPSGGIFIS--AGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRL 260
H V S ++ + + A GT + +WD G + H V + +
Sbjct: 321 PRFICEHEEGVTSLTWIGTSKYLATGCANGT-VSIWDSLL-GNCVHTYHGHQDAVQAISV 378
Query: 261 ASNNSRLMSASLDRHVKIYDVSTFK 285
++N ++S S+D ++++ S F+
Sbjct: 379 STNTDFIVSVSVDNTARVFESSEFQ 403
Score = 50.0 bits (114), Expect = 4e-06
Identities = 49/235 (20%), Positives = 107/235 (45%), Gaps = 8/235 (3%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F DG+LL +G + V++FD S + V G + + +++ S+D S+
Sbjct: 121 FSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLW 180
Query: 152 LWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV-NHG 210
+W+ E + F+ H + G +P +I +GS D ++ +++ ++ E+I V H
Sbjct: 181 MWNADKEAYLNMFSGHNLNVTCGDFTP-DGKLICTGSDDASLIVWNPKTCESIHIVKGHP 239
Query: 211 SPVESTLFLP-SGGIFISAGGTEIKVWDIFN--GGKLLSNISQHHKTVTTLRLASNNSRL 267
E L + ++ G++ I N GK++S+++ H +V ++ + +++ +
Sbjct: 240 YHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATI 299
Query: 268 MSAS---LDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISI 319
A+ +D+ + I+D+ + + S+ L G +G +SI
Sbjct: 300 PLAATGGMDKKLIIWDLQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSI 354
Score = 33.1 bits (72), Expect = 0.47
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 220 PSGGIFISAGGTEIK--VWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVK 277
P+ ++ GG + K +W I NG + + H +V+ L + + L S LD V+
Sbjct: 80 PTDATLVATGGGDDKAFLWKIGNGD-WAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQ 138
Query: 278 IYDVSTFKVVHNIDFPNA 295
I+D S+ + +D P A
Sbjct: 139 IFDASSGTLKCVLDGPGA 156
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 66.5 bits (155), Expect = 4e-11
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 11/229 (4%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE 158
++A + V +++ Q++ + + F PV F + +++ +DD + +++ +T
Sbjct: 30 ILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTM 89
Query: 159 ERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV--NHGSPVEST 216
+++ F H+DYIR A P P +LS S D +KL+D + + H V
Sbjct: 90 DKVKVFEAHSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQV 148
Query: 217 LFLPSG-GIFISAG-GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSR--LMSASL 272
+F P F SA IK+W++ + + + H K V + + + L++ S
Sbjct: 149 VFNPKDTNTFASASLDRTIKIWNLGSPDPNFT-LDAHQKGVNCVDYFTGGDKPYLITGSD 207
Query: 273 DRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDD--ILTVGMMDGIISI 319
D K++D T V +D +S A+ H + I+ G DG + I
Sbjct: 208 DHTAKVWDYQTKSCVQTLDGHTHNVS-AVCFHPELPIIITGSEDGTVRI 255
Score = 44.4 bits (100), Expect = 2e-04
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 105 EAAVKLFDVQSKNVLRVFTGHTGPVHRT-FFTK-DQLKIISYSDDKSVGLWDISTEERIA 162
+ +K++++ S + H V+ +FT D+ +I+ SDD + +WD T+ +
Sbjct: 164 DRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
Query: 163 NFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHG 210
+ HT + A P P II++GS D TV+++ + T+N+G
Sbjct: 224 TLDGHTHNVSAVCFHPELP-IIITGSEDGTVRIWHATTYRLENTLNYG 270
Score = 38.7 bits (86), Expect = 0.009
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
D L+ G ++ K++D Q+K+ ++ GHT V F + II+ S+D +V +W
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 155 IST 157
+T
Sbjct: 258 ATT 260
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 66.5 bits (155), Expect = 4e-11
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 11/229 (4%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE 158
++A + V +++ Q++ + + F PV F + +++ +DD + +++ +T
Sbjct: 30 ILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTM 89
Query: 159 ERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV--NHGSPVEST 216
+++ F H+DYIR A P P +LS S D +KL+D + + H V
Sbjct: 90 DKVKVFEAHSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQV 148
Query: 217 LFLPSG-GIFISAG-GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSR--LMSASL 272
+F P F SA IK+W++ + + + H K V + + + L++ S
Sbjct: 149 VFNPKDTNTFASASLDRTIKIWNLGSPDPNFT-LDAHQKGVNCVDYFTGGDKPYLITGSD 207
Query: 273 DRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDD--ILTVGMMDGIISI 319
D K++D T V +D +S A+ H + I+ G DG + I
Sbjct: 208 DHTAKVWDYQTKSCVQTLDGHTHNVS-AVCFHPELPIIITGSEDGTVRI 255
Score = 44.4 bits (100), Expect = 2e-04
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 105 EAAVKLFDVQSKNVLRVFTGHTGPVHRT-FFTK-DQLKIISYSDDKSVGLWDISTEERIA 162
+ +K++++ S + H V+ +FT D+ +I+ SDD + +WD T+ +
Sbjct: 164 DRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
Query: 163 NFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHG 210
+ HT + A P P II++GS D TV+++ + T+N+G
Sbjct: 224 TLDGHTHNVSAVCFHPELP-IIITGSEDGTVRIWHATTYRLENTLNYG 270
Score = 38.7 bits (86), Expect = 0.009
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
D L+ G ++ K++D Q+K+ ++ GHT V F + II+ S+D +V +W
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 155 IST 157
+T
Sbjct: 258 ATT 260
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 66.5 bits (155), Expect = 4e-11
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 11/229 (4%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE 158
++A + V +++ Q++ + + F PV F + +++ +DD + +++ +T
Sbjct: 30 ILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTM 89
Query: 159 ERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV--NHGSPVEST 216
+++ F H+DYIR A P P +LS S D +KL+D + + H V
Sbjct: 90 DKVKVFEAHSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQV 148
Query: 217 LFLPSG-GIFISAG-GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSR--LMSASL 272
+F P F SA IK+W++ + + + H K V + + + L++ S
Sbjct: 149 VFNPKDTNTFASASLDRTIKIWNLGSPDPNFT-LDAHQKGVNCVDYFTGGDKPYLITGSD 207
Query: 273 DRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDD--ILTVGMMDGIISI 319
D K++D T V +D +S A+ H + I+ G DG + I
Sbjct: 208 DHTAKVWDYQTKSCVQTLDGHTHNVS-AVCFHPELPIIITGSEDGTVRI 255
Score = 44.4 bits (100), Expect = 2e-04
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 105 EAAVKLFDVQSKNVLRVFTGHTGPVHRT-FFTK-DQLKIISYSDDKSVGLWDISTEERIA 162
+ +K++++ S + H V+ +FT D+ +I+ SDD + +WD T+ +
Sbjct: 164 DRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
Query: 163 NFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHG 210
+ HT + A P P II++GS D TV+++ + T+N+G
Sbjct: 224 TLDGHTHNVSAVCFHPELP-IIITGSEDGTVRIWHATTYRLENTLNYG 270
Score = 38.7 bits (86), Expect = 0.009
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
D L+ G ++ K++D Q+K+ ++ GHT V F + II+ S+D +V +W
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 155 IST 157
+T
Sbjct: 258 ATT 260
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 64.9 bits (151), Expect = 1e-10
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 6/193 (3%)
Query: 92 FRADGRLLVAGIEEAAVKLFDV-QSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSV 150
F G LL++ + VK++DV S +R + GH V F+ D K ++ DK++
Sbjct: 291 FPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNI 350
Query: 151 GLWDISTEERIANFNE-HTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN- 208
WD T + I+ F+ Y+ +I+L+G D + +D + E +
Sbjct: 351 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQ 410
Query: 209 HGSPVESTLFLPSGGIFI-SAGGTEIKVWDIFNGGKLLSNISQ-HHKTVTTLRLASNNSR 266
H V + F+ + F+ S+ ++VW+ F ++ IS+ H ++ ++ + N +
Sbjct: 411 HLGAVNTITFVDNNRRFVTSSDDKSLRVWE-FGIPVVIKYISEPHMHSMPSISVHPNGNW 469
Query: 267 LMSASLDRHVKIY 279
L + SLD + IY
Sbjct: 470 LAAQSLDNQILIY 482
Score = 63.3 bits (147), Expect = 4e-10
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 10/226 (4%)
Query: 116 KNVLRVFTGHTGPVHRT-FFTKDQLKIISYSDDKSVGLWDISTEER-IANFNEHTDYIRA 173
K ++ ++GHT V FF K ++S D V +WD+ + + + H +R
Sbjct: 272 KRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRD 331
Query: 174 GAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGI--FISAGGT 231
S + +G YD +K +D + + I T + G P + AG +
Sbjct: 332 ICFSNDGSKFLTAG-YDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMS 390
Query: 232 EIKV--WDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHN 289
+ K+ WDI N G++ QH V T+ NN R +++S D+ +++++ V+
Sbjct: 391 DKKIVQWDI-NTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY 449
Query: 290 IDFP--NAILSMAISEHDDILTVGMMDGIISIRKREEPVRQSEKRK 333
I P +++ S+++ + + L +D I I E + ++K++
Sbjct: 450 ISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKR 495
Score = 41.1 bits (92), Expect = 0.002
Identities = 23/103 (22%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 98 LLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 157
+L+AG+ + + +D+ + V + + H G V+ F + + ++ SDDKS+ +W+
Sbjct: 384 ILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 443
Query: 158 EERIANFNE-HTDYIRAGAASPISPDIILSGSYDHTVKLYDCR 199
I +E H + + + P + + + + S D+ + +Y R
Sbjct: 444 PVVIKYISEPHMHSMPSISVHP-NGNWLAAQSLDNQILIYSTR 485
Score = 34.3 bits (75), Expect = 0.20
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 91 CFRADG-RLLVAGIEEAAVKLFDVQSKNVLRVF-TGHTGPVHRTFFTKDQLKI-ISYSDD 147
CF DG + L AG ++ +K +D ++ V+ F TG V + D+ I ++ D
Sbjct: 333 CFSNDGSKFLTAGYDK-NIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSD 391
Query: 148 KSVGLWDISTEERIANFNEH 167
K + WDI+T E +++H
Sbjct: 392 KKIVQWDINTGEVTQEYDQH 411
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 63.7 bits (148), Expect = 3e-10
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 20/269 (7%)
Query: 98 LLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 157
+ G++ AV LFD S +L TGH+ V F D +++ S DK+V +W
Sbjct: 237 IATGGVDATAV-LFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPG 295
Query: 158 EERIA---NFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSP-V 213
+ A N+H+ +RA P + +S S D T YD S + V+ S V
Sbjct: 296 DGNYACGYTLNDHSAEVRAVTVHPTN-KYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNV 354
Query: 214 EST--LFLPSGGIFISAGGTE--IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMS 269
+ T F P G+ + G ++ +K+WD+ + ++ H VT + + N L +
Sbjct: 355 DYTAAAFHPD-GLILGTGTSQSVVKIWDVKSQAN-VAKFDGHTGEVTAISFSENGYFLAT 412
Query: 270 ASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISIRKREEPVRQS 329
A+ D V+++D+ + +F + + + A S D G GI + +
Sbjct: 413 AAED-GVRLWDLRKLR-----NFKSFLSADANSVEFD--PSGSYLGIAASDIKVYQTASV 464
Query: 330 EKRKNLLKFIPDHTSQTKADTVEVANEVK 358
+ NL+K +PD + KA V+ ++ +
Sbjct: 465 KAEWNLIKTLPDLSGTGKATCVKFGSDAQ 493
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F DG +L G ++ VK++DV+S+ + F GHTG V F+++ + + ++D V
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVR 419
Query: 152 LWDISTEERIANF 164
LWD+ +F
Sbjct: 420 LWDLRKLRNFKSF 432
Score = 43.6 bits (98), Expect = 3e-04
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Query: 180 SPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPVESTLFLPSGGIFISAGGTE-IKVWD 237
S D+I +G D T L+D S + + T+ H V S F+ + ++A + +++W
Sbjct: 233 SKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWR 292
Query: 238 IFNGGKLLS--NISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNI-DFPN 294
G ++ H V + + N +SASLD YD+S+ + + D
Sbjct: 293 NPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSK 352
Query: 295 AILSMAISEHDD--ILTVGMMDGIISI 319
+ A + H D IL G ++ I
Sbjct: 353 NVDYTAAAFHPDGLILGTGTSQSVVKI 379
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 63.7 bits (148), Expect = 3e-10
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 20/269 (7%)
Query: 98 LLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 157
+ G++ AV LFD S +L TGH+ V F D +++ S DK+V +W
Sbjct: 237 IATGGVDATAV-LFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPG 295
Query: 158 EERIA---NFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSP-V 213
+ A N+H+ +RA P + +S S D T YD S + V+ S V
Sbjct: 296 DGNYACGYTLNDHSAEVRAVTVHPTN-KYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNV 354
Query: 214 EST--LFLPSGGIFISAGGTE--IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMS 269
+ T F P G+ + G ++ +K+WD+ + ++ H VT + + N L +
Sbjct: 355 DYTAAAFHPD-GLILGTGTSQSVVKIWDVKSQAN-VAKFDGHTGEVTAISFSENGYFLAT 412
Query: 270 ASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISIRKREEPVRQS 329
A+ D V+++D+ + +F + + + A S D G GI + +
Sbjct: 413 AAED-GVRLWDLRKLR-----NFKSFLSADANSVEFD--PSGSYLGIAASDIKVYQTASV 464
Query: 330 EKRKNLLKFIPDHTSQTKADTVEVANEVK 358
+ NL+K +PD + KA V+ ++ +
Sbjct: 465 KAEWNLIKTLPDLSGTGKATCVKFGSDAQ 493
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F DG +L G ++ VK++DV+S+ + F GHTG V F+++ + + ++D V
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVR 419
Query: 152 LWDISTEERIANF 164
LWD+ +F
Sbjct: 420 LWDLRKLRNFKSF 432
Score = 43.6 bits (98), Expect = 3e-04
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Query: 180 SPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPVESTLFLPSGGIFISAGGTE-IKVWD 237
S D+I +G D T L+D S + + T+ H V S F+ + ++A + +++W
Sbjct: 233 SKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWR 292
Query: 238 IFNGGKLLS--NISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNI-DFPN 294
G ++ H V + + N +SASLD YD+S+ + + D
Sbjct: 293 NPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSK 352
Query: 295 AILSMAISEHDD--ILTVGMMDGIISI 319
+ A + H D IL G ++ I
Sbjct: 353 NVDYTAAAFHPDGLILGTGTSQSVVKI 379
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 63.3 bits (147), Expect = 4e-10
Identities = 39/194 (20%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F DG + ++ ++L++ +++ + H V T D K S D+ V
Sbjct: 26 FNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVY 85
Query: 152 LWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSN--ETIMTVNH 209
WD+ST I F H + A + S +++S +D +++++DCRS+ E + ++
Sbjct: 86 YWDVSTGRVIRKFRGHDGEVNAVKFND-SSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDT 144
Query: 210 GSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMS 269
++ L I + ++ +D+ G ++ N+ Q V + ++++ + +++
Sbjct: 145 FLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLGQ---PVNCISISNDGNCVLA 201
Query: 270 ASLDRHVKIYDVST 283
LD +++ D +T
Sbjct: 202 GCLDSTLRLLDRTT 215
Score = 46.8 bits (106), Expect = 4e-05
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRT--FFTKDQLKIISYSDDKSVGL 152
DG ++AG ++ ++L D + +L+V+ GH +T T +I S+D V
Sbjct: 195 DGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFF 254
Query: 153 WDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLY 196
WD+ + ++ F H D + + D +L+ S D T++++
Sbjct: 255 WDLVDAKVLSKFRAH-DLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 45.6 bits (103), Expect = 8e-05
Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 190 DHTVKLYDCRSNETIMTV-NHGSPVESTLFLPSGGIFISAGGT-EIKVWDIFNGGKLLSN 247
D T++L++ I T +HG V F S GG ++ WD+ + G+++
Sbjct: 39 DRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDV-STGRVIRK 97
Query: 248 ISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKV--VHNID-FPNAILSMAISEH 304
H V ++ ++S ++SA DR ++++D + V V ID F + ++S+ +++
Sbjct: 98 FRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKT 157
Query: 305 DDILTVGMMDGII 317
+ + G +DG +
Sbjct: 158 E--IIGGSVDGTV 168
Score = 39.1 bits (87), Expect = 0.007
Identities = 40/205 (19%), Positives = 82/205 (40%), Gaps = 7/205 (3%)
Query: 121 VFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPIS 180
+ GH G V F D ++ D+++ LW+ I + H +R + +
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDN 72
Query: 181 PDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPVESTLFLPSGGIFISAG-GTEIKVWDI 238
G D V +D + I H V + F S + +SAG ++VWD
Sbjct: 73 AKFCSCGG-DRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDC 131
Query: 239 -FNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAIL 297
+ + + I TV ++ L + ++ S+D V+ +D+ + + + + +
Sbjct: 132 RSHSVEPVQIIDTFLDTVMSVVL--TKTEIIGGSVDGTVRTFDMRIGREMSD-NLGQPVN 188
Query: 298 SMAISEHDDILTVGMMDGIISIRKR 322
++IS + + G +D + + R
Sbjct: 189 CISISNDGNCVLAGCLDSTLRLLDR 213
Score = 36.3 bits (80), Expect = 0.050
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 200 SNETIMTVNHGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTVTTL 258
+ E + H V + F G ++ G I++W+ G L+ H + V +
Sbjct: 8 TKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRG-ILIKTYKSHGREVRDV 66
Query: 259 RLASNNSRLMSASLDRHVKIYDVSTFKVV 287
+ S+N++ S DR V +DVST +V+
Sbjct: 67 HVTSDNAKFCSCGGDRQVYYWDVSTGRVI 95
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 62.9 bits (146), Expect = 5e-10
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 134 FTKDQLKIISYSDDKS-VGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHT 192
+ K + I+ SD + V +WD++T + + + EH + S P +++SGS D
Sbjct: 428 WNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCK 487
Query: 193 VKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTE--IKVWDIFNGGKLLSNISQ 250
VK++ R +++ ++ + + + P +I+ G + I +D+ N + L S
Sbjct: 488 VKVWCTRQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSG 547
Query: 251 HHKTVTTLRLASNNSRLMSASLDRHVKIYDV 281
H K V+ ++ SNN L SAS D ++++DV
Sbjct: 548 HKKAVSYVKFLSNN-ELASASTDSTLRLWDV 577
Score = 42.3 bits (95), Expect = 8e-04
Identities = 41/185 (22%), Positives = 71/185 (38%), Gaps = 8/185 (4%)
Query: 48 LDFSPVEPYYFAA---TCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIE 104
+DFS EP + C V+V V+ NI + G
Sbjct: 469 VDFSRTEPSMLVSGSDDCKVKVWCTRQEASVI--NIDMKANICCVKYNPGSSNYIAVGSA 526
Query: 105 EAAVKLFDVQS-KNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIAN 163
+ + +D+++ L VF+GH V F + ++ S S D ++ LWD+ +
Sbjct: 527 DHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNN-ELASASTDSTLRLWDVKDNLPVRT 585
Query: 164 FNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGG 223
F HT+ + ++ + + GS + V +Y + + GSP +G
Sbjct: 586 FRGHTNE-KNFVGLTVNSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGS 644
Query: 224 IFISA 228
FISA
Sbjct: 645 YFISA 649
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 62.9 bits (146), Expect = 5e-10
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE 158
++A + ++L+D + ++ F H GPV F Q +S DD + +W+ T
Sbjct: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTH 83
Query: 159 ERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETI-MTVNHGSPVESTL 217
+ H DYIR +P I+ S S D T+++++ +S I + H V
Sbjct: 84 RCLFTLLGHLDYIRTVQFHHENPWIV-SASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
Query: 218 FLPSGGIFISAG-GTEIKVWDI 238
F P + +SA ++VWDI
Sbjct: 143 FHPKEDLVVSASLDQTVRVWDI 164
Score = 60.5 bits (140), Expect = 3e-09
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 48 LDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAA 107
L F P P+ A+ S +Q++D + + G F L V+G ++
Sbjct: 15 LSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYK 74
Query: 108 VKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEH 167
+K+++ ++ L GH + F + I+S SDD+++ +W+ + I+ H
Sbjct: 75 IKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
Query: 168 TDYIRAGAASPISPDIILSGSYDHTVKLYD 197
Y+ + P D+++S S D TV+++D
Sbjct: 135 NHYVMCASFHP-KEDLVVSASLDQTVRVWD 163
Score = 43.2 bits (97), Expect = 4e-04
Identities = 53/244 (21%), Positives = 110/244 (45%), Gaps = 31/244 (12%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F + +V+ ++ +++++ QS+ + V TGH V F + ++S S D++V
Sbjct: 101 FHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Query: 152 LWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGS 211
+WDI ++ + + D +R S ++ D L G D VK + H
Sbjct: 161 VWDIGALKK-KSASPADDLMR---FSQMNSD--LFGGVDAIVK---------YVLEGHDR 205
Query: 212 PVESTLFLPSGGIFIS-AGGTEIKVWDIFNGGKL--LSNISQHHKTVTTLRLASNNSRLM 268
V F P+ + +S A ++K+W + N K + + H V+++ + ++
Sbjct: 206 GVNWASFHPTLPLIVSGADDRQVKLWRM-NETKAWEVDTLRGHMNNVSSVMFHAKQDIIV 264
Query: 269 SASLDRHVKIYD------VSTFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISIR-K 321
S S D+ ++++D + TF+ H + +A+ ++L G +G+I + +
Sbjct: 265 SNSEDKSIRVWDATKRTGIQTFRREH-----DRFWILAVHPEINLLAAGHDNGMIVFKLE 319
Query: 322 REEP 325
RE P
Sbjct: 320 RERP 323
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 62.9 bits (146), Expect = 5e-10
Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
DG L++ +++ L + ++ + + F GH G V + + L+ S S D S LWD
Sbjct: 30 DGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Query: 155 ISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSP-- 212
T + + +F EH +RA A S + +L+G ++ ++++D + T SP
Sbjct: 90 ALTGDVLHSF-EHKHIVRACAFSEDTKS-LLTGGFEKILRVFDMNRLDAPPTEVDKSPGS 147
Query: 213 VESTLFLPSGGIFISA----GGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLM 268
+ + +L S +S+ GG +++WD+ GK++ + K+ T S + R +
Sbjct: 148 IRTLTWLHSDQTILSSCTDIGG--VRLWDV-RSGKIVQTLET--KSPVTSAEVSQDGRYI 202
Query: 269 SASLDRHVKIYDVSTFKVVHNIDFPNAILSMAI 301
+ + VK +D + F +V + D P I S ++
Sbjct: 203 TTADGSTVKFWDANHFGLVKSYDMPCNIESASL 235
Score = 44.4 bits (100), Expect = 2e-04
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 120 RVFTGHTGPVHRTFF---TKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAA 176
+V GH+ PV F+ T D +IS S D L + T + I F H + +
Sbjct: 10 QVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCL 69
Query: 177 SPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEI-KV 235
+ S S D + KL+D + + + + H V + F ++ G +I +V
Sbjct: 70 DNNALRAA-SASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRV 128
Query: 236 WDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLD-RHVKIYDVSTFKVVHNIDFPN 294
+D+ + + + ++ TL ++ ++S+ D V+++DV + K+V ++ +
Sbjct: 129 FDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKS 188
Query: 295 AILSMAISEHDDILT 309
+ S +S+ +T
Sbjct: 189 PVTSAEVSQDGRYIT 203
Score = 43.6 bits (98), Expect = 3e-04
Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 3/199 (1%)
Query: 86 AAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYS 145
A + C + + + + KL+D + +VL F H V F++D +++
Sbjct: 63 AVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKSLLTGG 121
Query: 146 DDKSVGLWDIST-EERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETI 204
+K + ++D++ + ++ IR I+ S + V+L+D RS + +
Sbjct: 122 FEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIV 181
Query: 205 MTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNN 264
T+ SPV S G +A G+ +K WD + G L+ + + +
Sbjct: 182 QTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFG-LVKSYDMPCNIESASLEPKSG 240
Query: 265 SRLMSASLDRHVKIYDVST 283
+ ++ D V+++D T
Sbjct: 241 EKFVAGGEDMWVRVFDFYT 259
Score = 41.1 bits (92), Expect = 0.002
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 96 GRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 153
G VAG E+ V++FD + + GH GPVH FT L S S+D ++ +W
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 37.9 bits (84), Expect = 0.016
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 3/114 (2%)
Query: 209 HGSPVESTLF---LPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNS 265
H PV + P G ISA + G + H V + L +N
Sbjct: 15 HSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNAL 74
Query: 266 RLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISI 319
R SAS D K++D T V+H+ + + + + A SE L G + I+ +
Sbjct: 75 RAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRV 128
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 62.9 bits (146), Expect = 5e-10
Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
DG L++ +++ L + ++ + + F GH G V + + L+ S S D S LWD
Sbjct: 30 DGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Query: 155 ISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSP-- 212
T + + +F EH +RA A S + +L+G ++ ++++D + T SP
Sbjct: 90 ALTGDVLHSF-EHKHIVRACAFSEDTKS-LLTGGFEKILRVFDMNRLDAPPTEVDKSPGS 147
Query: 213 VESTLFLPSGGIFISA----GGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLM 268
+ + +L S +S+ GG +++WD+ GK++ + K+ T S + R +
Sbjct: 148 IRTLTWLHSDQTILSSCTDIGG--VRLWDV-RSGKIVQTLET--KSPVTSAEVSQDGRYI 202
Query: 269 SASLDRHVKIYDVSTFKVVHNIDFPNAILSMAI 301
+ + VK +D + F +V + D P I S ++
Sbjct: 203 TTADGSTVKFWDANHFGLVKSYDMPCNIESASL 235
Score = 44.4 bits (100), Expect = 2e-04
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 120 RVFTGHTGPVHRTFF---TKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAA 176
+V GH+ PV F+ T D +IS S D L + T + I F H + +
Sbjct: 10 QVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCL 69
Query: 177 SPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEI-KV 235
+ S S D + KL+D + + + + H V + F ++ G +I +V
Sbjct: 70 DNNALRAA-SASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRV 128
Query: 236 WDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLD-RHVKIYDVSTFKVVHNIDFPN 294
+D+ + + + ++ TL ++ ++S+ D V+++DV + K+V ++ +
Sbjct: 129 FDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKS 188
Query: 295 AILSMAISEHDDILT 309
+ S +S+ +T
Sbjct: 189 PVTSAEVSQDGRYIT 203
Score = 43.6 bits (98), Expect = 3e-04
Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 3/199 (1%)
Query: 86 AAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYS 145
A + C + + + + KL+D + +VL F H V F++D +++
Sbjct: 63 AVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKSLLTGG 121
Query: 146 DDKSVGLWDIST-EERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETI 204
+K + ++D++ + ++ IR I+ S + V+L+D RS + +
Sbjct: 122 FEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIV 181
Query: 205 MTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNN 264
T+ SPV S G +A G+ +K WD + G L+ + + +
Sbjct: 182 QTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFG-LVKSYDMPCNIESASLEPKSG 240
Query: 265 SRLMSASLDRHVKIYDVST 283
+ ++ D V+++D T
Sbjct: 241 EKFVAGGEDMWVRVFDFYT 259
Score = 41.1 bits (92), Expect = 0.002
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 96 GRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 153
G VAG E+ V++FD + + GH GPVH FT L S S+D ++ +W
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 37.9 bits (84), Expect = 0.016
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 3/114 (2%)
Query: 209 HGSPVESTLF---LPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNS 265
H PV + P G ISA + G + H V + L +N
Sbjct: 15 HSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNAL 74
Query: 266 RLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISI 319
R SAS D K++D T V+H+ + + + + A SE L G + I+ +
Sbjct: 75 RAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRV 128
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 62.5 bits (145), Expect = 7e-10
Identities = 45/194 (23%), Positives = 92/194 (47%), Gaps = 5/194 (2%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F G+ L + +L+D+ + L + GH+ V+ F +D S D
Sbjct: 347 FHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLAR 406
Query: 152 LWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV-NHG 210
+WD+ T I F H + + SP + + SG D+ +++D R +++ + H
Sbjct: 407 VWDLRTGRSILVFQGHIKPVFSVNFSP-NGYHLASGGEDNQCRIWDLRMRKSLYIIPAHA 465
Query: 211 SPVESTLFLPSGGIFISAGGTEIKVWDIFNGG--KLLSNISQHHKTVTTLRLASNNSRLM 268
+ V + P G F++ ++KV +I++G L+ +++ H V +L + +++S +
Sbjct: 466 NLVSQVKYEPQEGYFLATASYDMKV-NIWSGRDFSLVKSLAGHESKVASLDITADSSCIA 524
Query: 269 SASLDRHVKIYDVS 282
+ S DR +K++ S
Sbjct: 525 TVSHDRTIKLWTSS 538
Score = 52.4 bits (120), Expect = 7e-07
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 7/199 (3%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
D L A + A KL+ +L+ F GH + R F + + S DK+ LWD
Sbjct: 310 DDCLATASADRTA-KLWKTDG-TLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWD 367
Query: 155 ISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPV 213
I+T + H+ + G A + S D +++D R+ +I+ H PV
Sbjct: 368 INTGAELLLQEGHSRSV-YGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPV 426
Query: 214 ESTLFLPSGGIFISAG-GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSR-LMSAS 271
S F P+G S G + ++WD+ K L I H V+ ++ L +AS
Sbjct: 427 FSVNFSPNGYHLASGGEDNQCRIWDL-RMRKSLYIIPAHANLVSQVKYEPQEGYFLATAS 485
Query: 272 LDRHVKIYDVSTFKVVHNI 290
D V I+ F +V ++
Sbjct: 486 YDMKVNIWSGRDFSLVKSL 504
Score = 51.2 bits (117), Expect = 2e-06
Identities = 34/153 (22%), Positives = 66/153 (43%), Gaps = 2/153 (1%)
Query: 86 AAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYS 145
+ YG F+ DG L + ++ +++D+++ + VF GH PV F+ + + S
Sbjct: 383 SVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGG 442
Query: 146 DDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIM 205
+D +WD+ + + H + + P + + SYD V ++ R +
Sbjct: 443 EDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVK 502
Query: 206 TV-NHGSPVES-TLFLPSGGIFISAGGTEIKVW 236
++ H S V S + S I + IK+W
Sbjct: 503 SLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 62.1 bits (144), Expect = 9e-10
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 9/233 (3%)
Query: 73 TKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRT 132
T +V S+ V + DG L++ +++ L + ++ + + F GH G V +
Sbjct: 8 TPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSS 67
Query: 133 FFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHT 192
+ L+ S S D S LWD T + + +F EH +RA A S +++G ++
Sbjct: 68 CLDNNALRAASASADFSAKLWDALTGDVLHSF-EHKHIVRACAFSQ-DTKYLITGGFEKI 125
Query: 193 VKLYDCRSNETIMTVNHGSPVE-STLFLPSGGIFISAGGTEI---KVWDIFNGGKLLSNI 248
++++D + T SP TL G I + T+I ++WD+ GK++ +
Sbjct: 126 LRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDV-RSGKIVQTL 184
Query: 249 SQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAI 301
K+ T S + R ++ + VK +D + F +V + D P I S ++
Sbjct: 185 ET--KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYDMPCNIESASL 235
Score = 47.2 bits (107), Expect = 3e-05
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 3/203 (1%)
Query: 86 AAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYS 145
A + C + + + + KL+D + +VL F H V F++D +I+
Sbjct: 63 AVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDTKYLITGG 121
Query: 146 DDKSVGLWDIST-EERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETI 204
+K + ++D++ + ++ IR I+ S + V+L+D RS + +
Sbjct: 122 FEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDVRSGKIV 181
Query: 205 MTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNN 264
T+ SPV S G +A G+ +K WD + G + S + +L S N
Sbjct: 182 QTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGN 241
Query: 265 SRLMSASLDRHVKIYDVSTFKVV 287
+ ++ D V+++D T K +
Sbjct: 242 -KFVAGGEDMWVRLFDFHTGKEI 263
Score = 46.0 bits (104), Expect = 6e-05
Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 6/191 (3%)
Query: 124 GHTGPVHRTFF---TKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPIS 180
GH+ PV F+ T D +IS S D L + T + I F H + + +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73
Query: 181 PDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEI-KVWDIF 239
S S D + KL+D + + + + H V + F I+ G +I +V+D+
Sbjct: 74 LRAA-SASADFSAKLWDALTGDVLHSFEHKHIVRACAFSQDTKYLITGGFEKILRVFDLN 132
Query: 240 NGGKLLSNISQHHKTVTTLRLASNNSRLMSASLD-RHVKIYDVSTFKVVHNIDFPNAILS 298
+ I + ++ TL + ++S+ D V+++DV + K+V ++ + + S
Sbjct: 133 RLDAPPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTS 192
Query: 299 MAISEHDDILT 309
+S+ +T
Sbjct: 193 AEVSQDGRYIT 203
Score = 37.9 bits (84), Expect = 0.016
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 96 GRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 153
G VAG E+ V+LFD + + GH GPVH F S S+D ++ +W
Sbjct: 240 GNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Score = 37.1 bits (82), Expect = 0.029
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 3/114 (2%)
Query: 209 HGSPVESTLF---LPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNS 265
H PV + P G ISA + G + H V + L +N
Sbjct: 15 HSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNAL 74
Query: 266 RLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISI 319
R SAS D K++D T V+H+ + + + + A S+ L G + I+ +
Sbjct: 75 RAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSQDTKYLITGGFEKILRV 128
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 61.7 bits (143), Expect = 1e-09
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 140 KIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCR 199
++ S + + V +WD++ + + EH + + S P ++ SGS D +VKL+
Sbjct: 548 QVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN 607
Query: 200 SNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKV--WDIFNGGKLLSNISQHHKTVTT 257
+I T+ + + F G ++ G + KV +D+ N L + HHKTV+
Sbjct: 608 QGVSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSY 667
Query: 258 LRLASNNSRLMSASLDRHVKIYDVS 282
+R ++S L+S+S D +K++D+S
Sbjct: 668 VRFV-DSSTLVSSSTDNTLKLWDLS 691
Score = 42.7 bits (96), Expect = 6e-04
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 4/137 (2%)
Query: 105 EAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTK-DQLKIISYSDDKSVGLWDISTEERIAN 163
E V+++DV ++ H V ++ D + S SDD SV LW I+ I
Sbjct: 555 EGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGT 614
Query: 164 FNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIM--TVNHGSPVESTLFLPS 221
+ S + GS DH V YD R+ + + + H V F+ S
Sbjct: 615 IKTKANICCVQFPSETGRSLAF-GSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDS 673
Query: 222 GGIFISAGGTEIKVWDI 238
+ S+ +K+WD+
Sbjct: 674 STLVSSSTDNTLKLWDL 690
Score = 32.7 bits (71), Expect = 0.62
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 96 GRLLVAGIEEAAVKLFDVQSKNV-LRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
GR L G + V +D+++ + L GH V F D ++S S D ++ LWD
Sbjct: 631 GRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWD 689
Query: 155 IS------TEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLY 196
+S E + +F HT+ ++ +S I +GS + V +Y
Sbjct: 690 LSMSISGINETPLHSFMGHTN-VKNFVGLSVSDGYIATGSETNEVFVY 736
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 61.7 bits (143), Expect = 1e-09
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 140 KIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCR 199
++ S + + V +WD++ + + EH + + S P ++ SGS D +VKL+
Sbjct: 548 QVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN 607
Query: 200 SNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKV--WDIFNGGKLLSNISQHHKTVTT 257
+I T+ + + F G ++ G + KV +D+ N L + HHKTV+
Sbjct: 608 QGVSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSY 667
Query: 258 LRLASNNSRLMSASLDRHVKIYDVS 282
+R ++S L+S+S D +K++D+S
Sbjct: 668 VRFV-DSSTLVSSSTDNTLKLWDLS 691
Score = 42.7 bits (96), Expect = 6e-04
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 4/137 (2%)
Query: 105 EAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTK-DQLKIISYSDDKSVGLWDISTEERIAN 163
E V+++DV ++ H V ++ D + S SDD SV LW I+ I
Sbjct: 555 EGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGT 614
Query: 164 FNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIM--TVNHGSPVESTLFLPS 221
+ S + GS DH V YD R+ + + + H V F+ S
Sbjct: 615 IKTKANICCVQFPSETGRSLAF-GSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDS 673
Query: 222 GGIFISAGGTEIKVWDI 238
+ S+ +K+WD+
Sbjct: 674 STLVSSSTDNTLKLWDL 690
Score = 32.7 bits (71), Expect = 0.62
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 96 GRLLVAGIEEAAVKLFDVQSKNV-LRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
GR L G + V +D+++ + L GH V F D ++S S D ++ LWD
Sbjct: 631 GRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWD 689
Query: 155 IS------TEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLY 196
+S E + +F HT+ ++ +S I +GS + V +Y
Sbjct: 690 LSMSISGINETPLHSFMGHTN-VKNFVGLSVSDGYIATGSETNEVFVY 736
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 60.9 bits (141), Expect = 2e-09
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 12/148 (8%)
Query: 105 EAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANF 164
++ + L + + FTGH G V+ + + S SDD + +W+I + +
Sbjct: 427 DSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDL 486
Query: 165 NEHTDYIRAGAASPISPD--------IILSGSYDHTVKLYDCRSNETIMTVN-HGSPVES 215
EHT I SP P + S S+D TVKL+D + + + N H PV S
Sbjct: 487 REHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYS 546
Query: 216 TLFLPSGGIFISAGGTE--IKVWDIFNG 241
F P+G +I++G + I +W I G
Sbjct: 547 LAFSPNGE-YIASGSLDKSIHIWSIKEG 573
Score = 54.4 bits (125), Expect = 2e-07
Identities = 51/240 (21%), Positives = 107/240 (44%), Gaps = 16/240 (6%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
+ +G LL G + +++ + + ++ + H GP+ + K +++ S D++
Sbjct: 332 WNGEGTLLATGSCDGQARIWTLNGE-LISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAV 390
Query: 152 LWDISTEERIANFNEHT-DYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHG 210
+WD+ EE F H+ + + +S + S + K+ + R +T H
Sbjct: 391 VWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTF--TGHQ 448
Query: 211 SPVESTLFLPSGGIFIS-AGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLA-----SNN 264
V + P+G + S + + K+W+I + ++ +H K + T+R + +NN
Sbjct: 449 GEVNCVKWDPTGSLLASCSDDSTAKIWNI-KQSTFVHDLREHTKEIYTIRWSPTGPGTNN 507
Query: 265 SR----LMSASLDRHVKIYDVSTFKVVHNID-FPNAILSMAISEHDDILTVGMMDGIISI 319
L SAS D VK++D K++ + + + S+A S + + + G +D I I
Sbjct: 508 PNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHI 567
Score = 49.2 bits (112), Expect = 7e-06
Identities = 42/201 (20%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 98 LLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 157
LL ++ AV ++DV+++ + F H+GP + ++ + + S D + L I
Sbjct: 380 LLTGSVDRTAV-VWDVKAEEWKQQFEFHSGPTLDVDW-RNNVSFATSSTDSMIYLCKIGE 437
Query: 158 EERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN-HGSPVEST 216
F H + P ++ S S D T K+++ + + + + H + +
Sbjct: 438 TRPAKTFTGHQGEVNCVKWDPTG-SLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTI 496
Query: 217 LFLPSGG----------IFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSR 266
+ P+G + ++ + +K+WD GK+L + + H + V +L + N
Sbjct: 497 RWSPTGPGTNNPNKQLTLASASFDSTVKLWDA-ELGKMLCSFNGHREPVYSLAFSPNGEY 555
Query: 267 LMSASLDRHVKIYDVSTFKVV 287
+ S SLD+ + I+ + K+V
Sbjct: 556 IASGSLDKSIHIWSIKEGKIV 576
Score = 33.5 bits (73), Expect = 0.35
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 208 NHGSPVESTLFLPSGGIFISAGGTE--IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNS 265
N S +TL G ++ G + ++W + G+L+S +S+H + +L+
Sbjct: 321 NEKSKDVTTLDWNGEGTLLATGSCDGQARIWTL--NGELISTLSKHKGPIFSLKWNKKGD 378
Query: 266 RLMSASLDRHVKIYDVSTFKVVHNIDF 292
L++ S+DR ++DV + +F
Sbjct: 379 YLLTGSVDRTAVVWDVKAEEWKQQFEF 405
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 60.9 bits (141), Expect = 2e-09
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 88 YGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDD 147
Y F G +++ + ++L+ + L + GH PV F+ S S D
Sbjct: 422 YSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHD 481
Query: 148 KSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETI-MT 206
++ +W + +RI ++ P + + I +GS D TV+L+D ++ E + +
Sbjct: 482 RTARIWSM---DRIQPLRIMAGHLSDVDWHP-NCNYIATGSSDKTVRLWDVQTGECVRIF 537
Query: 207 VNHGSPVESTLFLPSGGIFISA--GGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNN 264
+ H S V S P G S GT I +WD+ + + ++ + H+ V +L +
Sbjct: 538 IGHRSMVLSLAMSPDGRYMASGDEDGT-IMMWDL-STARCITPLMGHNSCVWSLSYSGEG 595
Query: 265 SRLMSASLDRHVKIYDVST 283
S L S S D VK++DV++
Sbjct: 596 SLLASGSADCTVKLWDVTS 614
Score = 53.6 bits (123), Expect = 3e-07
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE 158
+ G + V+L+DVQ+ +R+F GH V + D + S +D ++ +WD+ST
Sbjct: 514 IATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTA 573
Query: 159 ERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSN 201
I H + + + S ++ SGS D TVKL+D S+
Sbjct: 574 RCITPLMGHNSCVWSLSYSG-EGSLLASGSADCTVKLWDVTSS 615
Score = 50.4 bits (115), Expect = 3e-06
Identities = 42/200 (21%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
GH+GPV+ F+ ++S S D ++ LW + + H + SP
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG-HY 474
Query: 184 ILSGSYDHTVKLYDC-RSNETIMTVNHGSPVESTLFLPSGGIFISAGGTE--IKVWDIFN 240
S S+D T +++ R + H S V+ + P+ +I+ G ++ +++WD+
Sbjct: 475 FASCSHDRTARIWSMDRIQPLRIMAGHLSDVD---WHPNCN-YIATGSSDKTVRLWDV-Q 529
Query: 241 GGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNA-ILSM 299
G+ + H V +L ++ + + S D + ++D+ST + + + N+ + S+
Sbjct: 530 TGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSL 589
Query: 300 AISEHDDILTVGMMDGIISI 319
+ S +L G D + +
Sbjct: 590 SYSGEGSLLASGSADCTVKL 609
Score = 39.9 bits (89), Expect = 0.004
Identities = 24/124 (19%), Positives = 51/124 (41%)
Query: 43 GAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAG 102
G + +D+ P Y + V+++D T + DGR + +G
Sbjct: 500 GHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASG 559
Query: 103 IEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIA 162
E+ + ++D+ + + GH V ++ + + S S D +V LWD+++ ++
Sbjct: 560 DEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLT 619
Query: 163 NFNE 166
E
Sbjct: 620 KAEE 623
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 60.9 bits (141), Expect = 2e-09
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 27/222 (12%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE 158
+V+G + +K + NV T H + F K LK S SDD +V +WD +
Sbjct: 180 MVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFT-- 237
Query: 159 ERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLF 218
+ + + T YI G + + R HG V+S +
Sbjct: 238 -KCVDESSLTGYIGKG--------------------VIEIRFGVMPCNAGHGWDVKSVDW 276
Query: 219 LPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVK 277
P+ + +S G + +K+WD +G +L S + H V +++ N + L++AS D+ +K
Sbjct: 277 HPTKSLLVSGGKDQLVKLWDTRSGRELCS-LHGHKNIVLSVKWNQNGNWLLTASKDQIIK 335
Query: 278 IYDVSTFKVVHNI-DFPNAILSMAISE-HDDILTVGMMDGII 317
+YD+ T K + + + S+A H++ G DG I
Sbjct: 336 LYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSI 377
Score = 47.2 bits (107), Expect = 3e-05
Identities = 28/96 (29%), Positives = 51/96 (53%)
Query: 98 LLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 157
LLV+G ++ VKL+D +S L GH V + ++ +++ S D+ + L+DI T
Sbjct: 282 LLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRT 341
Query: 158 EERIANFNEHTDYIRAGAASPISPDIILSGSYDHTV 193
+ + +F HT + + A P + +SGS D ++
Sbjct: 342 MKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSI 377
Score = 43.6 bits (98), Expect = 3e-04
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPV-HRTFFTKDQLKIISYSDDKSVGLW 153
+G L+ ++ +KL+D+++ L+ F GHT V + + +S S D S+ W
Sbjct: 321 NGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 380
Query: 154 DISTEE-RIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRS 200
+ E +I N H + + A PI ++ SGS DHT K + CR+
Sbjct: 381 IVGHENPQIEIPNAHDNSVWDLAWHPIG-YLLCSGSNDHTTKFW-CRN 426
Score = 35.5 bits (78), Expect = 0.088
Identities = 32/159 (20%), Positives = 66/159 (41%), Gaps = 4/159 (2%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
GH V + + ++S D+ V LWD + + + + H + + + + + +
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQ-NGNW 324
Query: 184 ILSGSYDHTVKLYDCRSNETIMTV-NHGSPVESTLFLPSGGIFISAGGTEIKV--WDIFN 240
+L+ S D +KLYD R+ + + + H V S + P + +G ++ + W + +
Sbjct: 325 LLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGH 384
Query: 241 GGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIY 279
+ + H +V L L S S D K +
Sbjct: 385 ENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 59.7 bits (138), Expect = 5e-09
Identities = 34/150 (22%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 48 LDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAA 107
L F P P+ A+ S +Q++D + + G F L V+G ++
Sbjct: 15 LSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYK 74
Query: 108 VKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEH 167
+K+++ ++ L GH + F + I+S SDD+++ +W+ + ++ H
Sbjct: 75 IKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGH 134
Query: 168 TDYIRAGAASPISPDIILSGSYDHTVKLYD 197
Y+ + P D+++S S D TV+++D
Sbjct: 135 NHYVMCASFHP-KEDLVVSASLDQTVRVWD 163
Score = 59.3 bits (137), Expect = 6e-09
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE 158
++A + ++L+D + ++ F H GPV F Q +S DD + +W+
Sbjct: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNH 83
Query: 159 ERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETI-MTVNHGSPVESTL 217
+ H DYIR P I+ S S D T+++++ +S + + H V
Sbjct: 84 RCLFTLLGHLDYIRTVQFHHEYPWIV-SASDDQTIRIWNWQSRTCVSVLTGHNHYVMCAS 142
Query: 218 FLPSGGIFISAG-GTEIKVWDI 238
F P + +SA ++VWDI
Sbjct: 143 FHPKEDLVVSASLDQTVRVWDI 164
Score = 46.8 bits (106), Expect = 4e-05
Identities = 31/138 (22%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 150 VGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV-N 208
+ LWD I F+EH +R G S + +SG D+ +K+++ +++ + T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVR-GVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLG 91
Query: 209 HGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRL 267
H + + F +SA + I++W+ + +S ++ H+ V +
Sbjct: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWN-WQSRTCVSVLTGHNHYVMCASFHPKEDLV 150
Query: 268 MSASLDRHVKIYDVSTFK 285
+SASLD+ V+++D+ +
Sbjct: 151 VSASLDQTVRVWDIGALR 168
Score = 41.5 bits (93), Expect = 0.001
Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 4/146 (2%)
Query: 26 DIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVE 85
D++ L V V + GA+ SP + + ++ V +V +
Sbjct: 148 DLVVSASLDQTVRVWDIGALRKKTVSPADD--IMRLTQMNSDLFGGVDAIVKYVLEGHDR 205
Query: 86 AAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFT--GHTGPVHRTFFTKDQLKIIS 143
F L+V+G ++ VKL+ + V T GH V F Q I+S
Sbjct: 206 GVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVS 265
Query: 144 YSDDKSVGLWDISTEERIANFNEHTD 169
S+DKS+ +WD + + F D
Sbjct: 266 NSEDKSIRVWDATKRTGLQTFRREHD 291
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 58.4 bits (135), Expect = 1e-08
Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 14/189 (7%)
Query: 109 KLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHT 168
K+F V K L F GH+G + ++K+ +++S S D SV LW I E+ + F+ H
Sbjct: 340 KIFRVLDKP-LHEFLGHSGDILDISWSKNN-RLLSASVDNSVRLWQIGCEDCLGIFS-HN 396
Query: 169 DYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSG-GIFIS 227
+Y+ + +P+ D +SGS D V+++ + + + V + + P G + I
Sbjct: 397 NYVTSVQFNPVDDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPDGQAVIIG 456
Query: 228 AGGTEIKVWDIFNGG-KLLSNISQHHKTVTTLRL-------ASNNSRLMSASLDRHVKIY 279
++ + +++ +L +I H+K ++ + +++ SR+M AS D V+I
Sbjct: 457 TLTSDCRFYNVSGHCLQLDGHICLHNKKKSSNKRIIGFQFDSTDPSRVMVASADSQVRI- 515
Query: 280 DVSTFKVVH 288
+S VVH
Sbjct: 516 -ISGRNVVH 523
Score = 32.3 bits (70), Expect = 0.82
Identities = 53/232 (22%), Positives = 89/232 (38%), Gaps = 30/232 (12%)
Query: 96 GRLLVAG--IEEAAVKLFDVQSKNVLRVFTG-----HTGPVHRTFFTKDQLKIISYSDDK 148
G + V G IE VK + ++K + +F G H G + F+ D + S +D
Sbjct: 214 GEVAVCGSRIERVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRYLASAGEDG 273
Query: 149 SVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN 208
+ +W + +ER EH I P I Y KL + R
Sbjct: 274 VLRVWSVVEDERC---EEHD-------VPKIDPSCI----YFEVSKLSELRPVAVEKDGI 319
Query: 209 HGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLM 268
GS + S + I K++ + + K L H + + + NN RL+
Sbjct: 320 TGSLMSPRKTTESACVIIPP-----KIFRVLD--KPLHEFLGHSGDILDISWSKNN-RLL 371
Query: 269 SASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISE-HDDILTVGMMDGIISI 319
SAS+D V+++ + + N + S+ + DD G +DG + I
Sbjct: 372 SASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRI 423
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 97 RLLVAGIEEAAVKLFDVQSKNVLRVFTG--HTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
R++VA + + V++ + +NV+ + G + G FT D I+S DD SV +W+
Sbjct: 503 RVMVASAD-SQVRI--ISGRNVVHKYKGSRNAGNQISASFTADGKHIVSACDDSSVYVWN 559
Query: 155 I---STEERIANFNEHTDYIRAGAASPISPDI 183
E+ F HT ++ + S D+
Sbjct: 560 CVGHDPEQSSPGFFSHTKRLKIRSFEKFSADV 591
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 58.0 bits (134), Expect = 1e-08
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 15/227 (6%)
Query: 110 LFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTD 169
+F + K + FTGH V +++ QL ++S S DK+V LWDI T+ + F H D
Sbjct: 504 VFSLSDKPICS-FTGHLDDVLDLSWSRSQL-LLSSSMDKTVRLWDIETQSCLKLF-AHND 560
Query: 170 YIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSG-GIFISA 228
Y+ +P+ D +SGS D +++++ + + + + V + + P G F+ +
Sbjct: 561 YVTCVQFNPLDEDYFISGSLDAKIRIWNISNRQVVEWNDLKEMVTAVCYTPDGQAAFVGS 620
Query: 229 GGTEIKVW-------DIFNGGKLLSNISQHHKTVTTLRLAS-NNSRLMSASLDRHVKIYD 280
+++ + N L + K +T + + N S ++ S D +++ D
Sbjct: 621 INGHCRLYSAEDCKLEQTNQIDLQNKKKAQAKKITAFQFSPINPSEVLVTSADSRIRVLD 680
Query: 281 VSTFKVVHNIDFPNAILSMAISEHDDI--LTVGMMDGIISIRKREEP 325
T V F N M S D + D + + K EEP
Sbjct: 681 -GTELVQKFRGFKNMNSQMTASYTVDAKHIVCASEDSQVYVWKHEEP 726
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 58.0 bits (134), Expect = 1e-08
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 2/152 (1%)
Query: 85 EAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISY 144
E+ Y G +LV+G E ++++D ++ + GHT V +S
Sbjct: 214 ESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSG 273
Query: 145 SDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETI 204
S D + LWD+ + + + HTD + A A +P S + SG D + L D + E++
Sbjct: 274 SSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNP-SFSHVYSGGRDQCLYLTDLATRESV 332
Query: 205 MTVNHGSPVESTLFLPSGGIFISAGGTEIKVW 236
+ P++ L L I+++ + ++ W
Sbjct: 333 LLCTKEHPIQQ-LALQDNSIWVATTDSSVERW 363
Score = 37.5 bits (83), Expect = 0.022
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 184 ILSGSYDHTVKLYDCRSNETIMTVNHGSPVE--STLFLPSGGIFISAGG-TEIKVWDIFN 240
+ +GS D T+K + + T + S V+ + L +S T +K WD +
Sbjct: 55 LFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGESTLVSCSSDTTVKTWDGLS 114
Query: 241 GGKLLSNISQHHKTVTTLRLAS-NNSRLMSASLDRHVKIYDV 281
G + QH VT L +A+ NN+ + S L V I+D+
Sbjct: 115 DGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 35.5 bits (78), Expect = 0.088
Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 7/195 (3%)
Query: 95 DGRLLVAGIEEAAVK--LFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGL 152
D L G + +K FD + F H V+ + ++S S D +V
Sbjct: 51 DQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTTVKT 109
Query: 153 WD-ISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGS 211
WD +S +H+DY+ A + + +++ SG V ++D + + +T + +
Sbjct: 110 WDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDA 169
Query: 212 PVESTLFLPSGGI--FISAGGT-EIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLM 268
+S+ +G + + G + I V + G + H ++V L + + L+
Sbjct: 170 NEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLV 229
Query: 269 SASLDRHVKIYDVST 283
S ++ ++++D T
Sbjct: 230 SGGTEKVLRVWDPRT 244
Score = 32.3 bits (70), Expect = 0.82
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
GH V+ ++S +K + +WD T + HTD +R +
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRV-LLLDSTGRF 269
Query: 184 ILSGSYDHTVKLYDCRSNETIMT 206
LSGS D ++L+D + T
Sbjct: 270 CLSGSSDSMIRLWDLGQQRCLHT 292
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 58.0 bits (134), Expect = 1e-08
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 2/152 (1%)
Query: 85 EAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISY 144
E+ Y G +LV+G E ++++D ++ + GHT V +S
Sbjct: 214 ESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSG 273
Query: 145 SDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETI 204
S D + LWD+ + + + HTD + A A +P S + SG D + L D + E++
Sbjct: 274 SSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNP-SFSHVYSGGRDQCLYLTDLATRESV 332
Query: 205 MTVNHGSPVESTLFLPSGGIFISAGGTEIKVW 236
+ P++ L L I+++ + ++ W
Sbjct: 333 LLCTKEHPIQQ-LALQDNSIWVATTDSSVERW 363
Score = 37.5 bits (83), Expect = 0.022
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 184 ILSGSYDHTVKLYDCRSNETIMTVNHGSPVE--STLFLPSGGIFISAGG-TEIKVWDIFN 240
+ +GS D T+K + + T + S V+ + L +S T +K WD +
Sbjct: 55 LFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGESTLVSCSSDTTVKTWDGLS 114
Query: 241 GGKLLSNISQHHKTVTTLRLAS-NNSRLMSASLDRHVKIYDV 281
G + QH VT L +A+ NN+ + S L V I+D+
Sbjct: 115 DGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 35.5 bits (78), Expect = 0.088
Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 7/195 (3%)
Query: 95 DGRLLVAGIEEAAVK--LFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGL 152
D L G + +K FD + F H V+ + ++S S D +V
Sbjct: 51 DQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTTVKT 109
Query: 153 WD-ISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGS 211
WD +S +H+DY+ A + + +++ SG V ++D + + +T + +
Sbjct: 110 WDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDA 169
Query: 212 PVESTLFLPSGGI--FISAGGT-EIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLM 268
+S+ +G + + G + I V + G + H ++V L + + L+
Sbjct: 170 NEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLV 229
Query: 269 SASLDRHVKIYDVST 283
S ++ ++++D T
Sbjct: 230 SGGTEKVLRVWDPRT 244
Score = 32.3 bits (70), Expect = 0.82
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
GH V+ ++S +K + +WD T + HTD +R +
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRV-LLLDSTGRF 269
Query: 184 ILSGSYDHTVKLYDCRSNETIMT 206
LSGS D ++L+D + T
Sbjct: 270 CLSGSSDSMIRLWDLGQQRCLHT 292
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 56.8 bits (131), Expect = 3e-08
Identities = 39/149 (26%), Positives = 77/149 (51%), Gaps = 7/149 (4%)
Query: 140 KIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCR 199
K++ S + + LW+I+T++ + F + + +SP + D++ G D + +++ +
Sbjct: 153 KVLVGSQEGPLQLWNINTKKMLYQFKGWGSSVTSCVSSP-ALDVVAIGCADGKIHVHNIK 211
Query: 200 SNETIMTVNHGS--PVESTLFLPSGGIFISAGGT--EIKVWDIFNGGKLLSNI-SQHHKT 254
+E I+T H S V + F G +++GG+ I +W++ N +L S I H +
Sbjct: 212 LDEEIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNL-NKKRLQSVIRDAHDSS 270
Query: 255 VTTLRLASNNSRLMSASLDRHVKIYDVST 283
+ +L +N LMSAS D +K++ T
Sbjct: 271 IISLNFLANEPVLMSASADNSLKMWIFDT 299
Score = 43.6 bits (98), Expect = 3e-04
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 93 RADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGL 152
R +G LL ++ ++L+DV + ++R F GHT + F++D +IS S D S+ +
Sbjct: 525 RVNG-LLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRI 583
Query: 153 WDISTEERIANFNEHTDY-IRAGAASPISPDIILSGSYD 190
WD+ ++I H D I A + SP + D++ + D
Sbjct: 584 WDVILAKQIDGV--HVDVPITALSLSP-NMDVLATAHSD 619
Score = 41.5 bits (93), Expect = 0.001
Identities = 28/142 (19%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 174 GAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFIS-AGGTE 232
G A + +++S Y +K++D + E + G + ++ G+ + A
Sbjct: 479 GVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIVYHRVNGLLATVADDFV 538
Query: 233 IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDF 292
I+++D+ K++ H +T L + + ++S+S+D ++I+DV K + +
Sbjct: 539 IRLYDVVTL-KMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGVHV 597
Query: 293 PNAILSMAISEHDDILTVGMMD 314
I ++++S + D+L D
Sbjct: 598 DVPITALSLSPNMDVLATAHSD 619
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 56.8 bits (131), Expect = 3e-08
Identities = 54/225 (24%), Positives = 107/225 (47%), Gaps = 14/225 (6%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
+GRL V+G + V ++++ + ++ GH V T D I+S S D+++ W
Sbjct: 83 EGRL-VSGSMDTFVFVWNLMNGENIQTLKGHQMQV--TGVAIDNEDIVSSSVDQTLKRW- 138
Query: 155 ISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVE 214
+ + +++ H I+A P ++SGS D ++KL+ +++ ++ H V
Sbjct: 139 -RNGQLVESWDAHQSPIQAVIRLPSGE--LVSGSSDASLKLWKGKTSLQTLS-GHTDTVR 194
Query: 215 STLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDR 274
+P G ++ I++W + G++L + H V ++ A ++ ++SAS DR
Sbjct: 195 GLAVMPDLGFLSASHDGSIRLWAL--SGEVLLEMVGHTSLVYSVD-AHSSGLIVSASEDR 251
Query: 275 HVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISI 319
H KI+ V +++ P I E DI+T DG++ +
Sbjct: 252 HAKIWKDGV--CVQSLEHPGCIWDAKFLETGDIVT-ACSDGVVRV 293
Score = 50.8 bits (116), Expect = 2e-06
Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 115 SKNVLRVFTGHTGPVHRTFFTKD--QLKIISYSDDKSVGLWDISTEERIANFNEHTDYIR 172
S+ +L T GP+ T + + +++S S D V +W++ E I H +
Sbjct: 58 SEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQV- 116
Query: 173 AGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN-HGSPVESTLFLPSGGIFISAGGT 231
G A I + I+S S D T+K + R+ + + + + H SP+++ + LPSG + +
Sbjct: 117 TGVA--IDNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAVIRLPSGELVSGSSDA 172
Query: 232 EIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVS 282
+K+W G L +S H TV L + + +SAS D ++++ +S
Sbjct: 173 SLKLW---KGKTSLQTLSGHTDTVRGLAVMPDLG-FLSASHDGSIRLWALS 219
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 56.8 bits (131), Expect = 3e-08
Identities = 54/225 (24%), Positives = 107/225 (47%), Gaps = 14/225 (6%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
+GRL V+G + V ++++ + ++ GH V T D I+S S D+++ W
Sbjct: 83 EGRL-VSGSMDTFVFVWNLMNGENIQTLKGHQMQV--TGVAIDNEDIVSSSVDQTLKRW- 138
Query: 155 ISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVE 214
+ + +++ H I+A P ++SGS D ++KL+ +++ ++ H V
Sbjct: 139 -RNGQLVESWDAHQSPIQAVIRLPSGE--LVSGSSDASLKLWKGKTSLQTLS-GHTDTVR 194
Query: 215 STLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDR 274
+P G ++ I++W + G++L + H V ++ A ++ ++SAS DR
Sbjct: 195 GLAVMPDLGFLSASHDGSIRLWAL--SGEVLLEMVGHTSLVYSVD-AHSSGLIVSASEDR 251
Query: 275 HVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISI 319
H KI+ V +++ P I E DI+T DG++ +
Sbjct: 252 HAKIWKDGV--CVQSLEHPGCIWDAKFLETGDIVT-ACSDGVVRV 293
Score = 50.8 bits (116), Expect = 2e-06
Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 115 SKNVLRVFTGHTGPVHRTFFTKD--QLKIISYSDDKSVGLWDISTEERIANFNEHTDYIR 172
S+ +L T GP+ T + + +++S S D V +W++ E I H +
Sbjct: 58 SEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQV- 116
Query: 173 AGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN-HGSPVESTLFLPSGGIFISAGGT 231
G A I + I+S S D T+K + R+ + + + + H SP+++ + LPSG + +
Sbjct: 117 TGVA--IDNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAVIRLPSGELVSGSSDA 172
Query: 232 EIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVS 282
+K+W G L +S H TV L + + +SAS D ++++ +S
Sbjct: 173 SLKLW---KGKTSLQTLSGHTDTVRGLAVMPDLG-FLSASHDGSIRLWALS 219
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 56.4 bits (130), Expect = 4e-08
Identities = 33/130 (25%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Query: 68 VYDP-VTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHT 126
+++P V+K K ++ + F DG+ + + + +V+L++ + + VF GH
Sbjct: 343 LWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHV 402
Query: 127 GPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILS 186
GPV++ ++ D ++S S D ++ +W+I T++ + H D + A SP + ++S
Sbjct: 403 GPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSP-DGEKVVS 461
Query: 187 GSYDHTVKLY 196
G D +KL+
Sbjct: 462 GGKDRVLKLW 471
Score = 56.0 bits (129), Expect = 6e-08
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 99 LVAGIEEAAVKLFDVQ-SKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 157
LV+G ++ + L++ SK + TGH V+ +F+ D I S S DKSV LW+ T
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 158 EERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPVEST 216
+ + F H + + S S ++LSGS D T+K+++ R+ + + H V +
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSADSR-LLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAV 450
Query: 217 LFLPSGGIFISAGGTEI-KVW 236
+ P G +S G + K+W
Sbjct: 451 DWSPDGEKVVSGGKDRVLKLW 471
Score = 49.6 bits (113), Expect = 5e-06
Identities = 25/109 (22%), Positives = 58/109 (53%)
Query: 45 IDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIE 104
++++ FSP + +A+ V++++ +T V Y + AD RLL++G +
Sbjct: 363 VNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSK 422
Query: 105 EAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 153
++ +K++++++K + + GH V ++ D K++S D+ + LW
Sbjct: 423 DSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 46.4 bits (105), Expect = 5e-05
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 8/198 (4%)
Query: 71 PVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVH 130
PV + ++ I+ EA F DG+ L +G + V+L+D+ ++ L GH V
Sbjct: 97 PVNRC-SQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVL 155
Query: 131 RTFFTKDQLKIISYSDDKSVGLWDISTEERIAN-FNEHTDYIRAGAASPI---SP-DIIL 185
++ D ++S S + W+ E + H +I + P+ SP +
Sbjct: 156 TVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFV 215
Query: 186 SGSYDHTVKLYDCRSNETIMTVN-HGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKL 244
+ S D +++D ++I+ ++ H V + G I+ + IK+W+ GKL
Sbjct: 216 TSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWET-TQGKL 274
Query: 245 LSNISQHHKTVTTLRLAS 262
+ + H + +L L++
Sbjct: 275 IRELKGHGHWINSLALST 292
Score = 39.9 bits (89), Expect = 0.004
Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 23/242 (9%)
Query: 120 RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPI 179
+ GH V F+ D ++ S S D +V LWD+ TE + H +++ A SP
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Query: 180 SPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVEST--------LFLPSGGIFISAGGT 231
++ SGS + ++ + E + G T L P S+
Sbjct: 163 GKHLV-SGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDG 221
Query: 232 EIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNI- 290
+ ++WDI K + +S H VT ++ + + + S D +K+++ + K++ +
Sbjct: 222 DARIWDI-TLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIRELK 279
Query: 291 DFPNAILSMAISEHDDILTVGMMDGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKADT 350
+ I S+A+S + +L G D R+ P + EK+K L ++ ++TK D+
Sbjct: 280 GHGHWINSLALST-EYVLRTGAFDH----TGRQYPPNE-EKQKALERY-----NKTKGDS 328
Query: 351 VE 352
E
Sbjct: 329 PE 330
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 56.4 bits (130), Expect = 4e-08
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 147 DKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMT 206
D V LWD++T + I++F EH + S P + SGS D +VKL++ + T
Sbjct: 775 DGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNCLGT 834
Query: 207 VNHGSPVESTLFLPSGGIFISAGGTEIKV--WDIFNGGKLLSNISQHHKTVTTLRLASNN 264
+ + + V F P ++ G ++ + +D+ N +S H+K V+ + N
Sbjct: 835 IRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNE 894
Query: 265 SRLMSASLDRHVKIYDV 281
+ L++AS D +K++D+
Sbjct: 895 T-LVTASTDNTLKLWDL 910
Score = 46.8 bits (106), Expect = 4e-05
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 9/189 (4%)
Query: 53 VEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFD 112
++ Y F + + V ++ P ++ N SK + R L + + VKL+D
Sbjct: 728 IKIYEFNSLFNESVDIHYPAIEM--PNRSKLSGVCWNNYIR---NYLASSDYDGIVKLWD 782
Query: 113 VQSKNVLRVFTGHTGPVHRTFFTKD-QLKIISYSDDKSVGLWDISTEERIANFNEHTDYI 171
V + + F H F++ K+ S SDD SV LW+I+ + + +
Sbjct: 783 VTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNCLGTIRNIAN-V 841
Query: 172 RAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV--NHGSPVESTLFLPSGGIFISAG 229
SP S ++ GS D YD R+ T + H V FL + + ++
Sbjct: 842 CCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTAST 901
Query: 230 GTEIKVWDI 238
+K+WD+
Sbjct: 902 DNTLKLWDL 910
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 56.4 bits (130), Expect = 4e-08
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
GH + ++K QL ++S S DK+V LWDI T+ + F H DY+ SP+ +
Sbjct: 504 GHLDAILDLSWSKSQL-LLSSSMDKTVRLWDIETKTCLKLF-AHNDYVTCIQFSPVDENY 561
Query: 184 ILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSG-GIFISAGGTEIKVWDI---- 238
LSGS D ++++ + + + V + + P G G I + + +D
Sbjct: 562 FLSGSLDAKIRIWSIQDRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGICRAYDTEDCK 621
Query: 239 ---FNGGKLLSN-ISQHHKTVTTLRLAS-NNSRLMSASLDRHVKIYDVSTFKVVHNI-DF 292
N + SN SQ + +T+ + + N S ++ S D ++I D S +V+H F
Sbjct: 622 LSQTNQIDVQSNKKSQAKRKITSFQFSPVNPSEVLVTSADSRIRILDGS--EVIHKFKGF 679
Query: 293 PNAILSMAISEHDD 306
N ++ S D
Sbjct: 680 RNTCSQLSASYSQD 693
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 56.4 bits (130), Expect = 4e-08
Identities = 52/236 (22%), Positives = 106/236 (44%), Gaps = 11/236 (4%)
Query: 84 VEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIIS 143
V+ AY DG L++ +++ L + ++ + + F GH G V K+ ++ S
Sbjct: 15 VDVAYSPV-TPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAIRAAS 73
Query: 144 YSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNET 203
S D + +W+ T + + +F EH +RA A S +L+G + ++++D +
Sbjct: 74 ASADFTAKIWNALTGDELHSF-EHKHIVRACAFSE-DTHRLLTGGMEKILRIFDLNRPDA 131
Query: 204 IMTVNHGSP--VESTLFLPSGGIFISA--GGTEIKVWDIFNGGKLLSNISQHHKTVTTLR 259
SP + + +L S +S+ +I++WDI K++ + K+ T
Sbjct: 132 PPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDI-RSDKIVHTLET--KSPVTSA 188
Query: 260 LASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAIS-EHDDILTVGMMD 314
S + R ++ + VK +D F ++ + D P + S ++ +H + G D
Sbjct: 189 EVSQDGRYITTADGSSVKFWDAKNFGLLKSYDMPCNVESASLEPKHGNTFIAGGED 244
Score = 43.2 bits (97), Expect = 4e-04
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 7/190 (3%)
Query: 97 RLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRT--FFTKDQLKIISYSDDKSVGLWD 154
RLL G+E+ +++FD+ + G++ RT + D + S +D + LWD
Sbjct: 111 RLLTGGMEKI-LRIFDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWD 169
Query: 155 ISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVE 214
I +++ + + A + GS +VK +D ++ + + + VE
Sbjct: 170 IRSDKIVHTLETKSPVTSAEVSQDGRYITTADGS---SVKFWDAKNFGLLKSYDMPCNVE 226
Query: 215 STLFLPSGGIFISAGGTEIKVWDI-FNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLD 273
S P G AGG ++ V F G+ + HH V +R A S S D
Sbjct: 227 SASLEPKHGNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSED 286
Query: 274 RHVKIYDVST 283
V+I+ V +
Sbjct: 287 GTVRIWVVGS 296
Score = 37.1 bits (82), Expect = 0.029
Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 3/120 (2%)
Query: 209 HGSPVESTLF---LPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNS 265
H PV + P G ISA + G + H V + L N
Sbjct: 10 HSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAI 69
Query: 266 RLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISIRKREEP 325
R SAS D KI++ T +H+ + + + + A SE L G M+ I+ I P
Sbjct: 70 RAASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHRLLTGGMEKILRIFDLNRP 129
Score = 35.9 bits (79), Expect = 0.066
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 96 GRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 155
G +AG E+ V FD Q+ + GH GPVH + S S+D +V +W +
Sbjct: 235 GNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVV 294
Query: 156 ST 157
+
Sbjct: 295 GS 296
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 56.0 bits (129), Expect = 6e-08
Identities = 52/228 (22%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 66 VQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKN-VLRVFTG 124
VQ++D V+ + + E+ G D +L G + + DV+ ++ ++ + G
Sbjct: 192 VQLWDCVSNRQVRTLRGGHESRVGS-LAWDNHILTTGGMDGKIVNNDVRIRSSIVETYLG 250
Query: 125 HTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS------TEERIANFNEHTDYIRAGAASP 178
HT V +++ K S +D V +WD S T + + F EHT +RA A P
Sbjct: 251 HTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCP 310
Query: 179 ISPDIILSGS--YDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGG---TEI 233
++ +G D +K ++ + + +V GS V S L+ S +S+ G ++
Sbjct: 311 FQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQSERELLSSHGFTQNQL 370
Query: 234 KVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDV 281
+W + K ++ ++ H V + + N + SA+ D ++++++V
Sbjct: 371 TLWKYPSMSK-MAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 417
Score = 29.5 bits (63), Expect = 5.8
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 7/135 (5%)
Query: 108 VKLFDVQSKNVLRVFT--GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFN 165
V L+D S + + T GPV +T+D L + D+ V LWD + ++
Sbjct: 148 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLR 207
Query: 166 EHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMT--VNHGSPVESTLFLPSGG 223
+ R G+ + I+ +G D + D R +I+ + H V + SG
Sbjct: 208 GGHE-SRVGSLA-WDNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGN 265
Query: 224 IFISAGGTE-IKVWD 237
S G + +WD
Sbjct: 266 KQASGGNDNVVHIWD 280
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 56.0 bits (129), Expect = 6e-08
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 9/205 (4%)
Query: 85 EAAYGGCF-RADGRLLVAGIEEAAVKLFDVQ---SKNVLRVFTGHTGPVHRTFFTKDQL- 139
+A Y C+ + +L+A I + +VK++D N +R F H V + +
Sbjct: 61 DAVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRD 120
Query: 140 KIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCR 199
++ S D +V LW + + F EH + +P D+ S S D T++++D R
Sbjct: 121 SFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVR 180
Query: 200 S-NETIMTVNHGSPVESTLFLPSGGIFISAGGTE--IKVWDIFNGGKLLSNISQHHKTVT 256
T++ H + S + ++ + +KVWD+ + L+ ++ H V
Sbjct: 181 EPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVR 240
Query: 257 TLRLASN-NSRLMSASLDRHVKIYD 280
++ + + S + S S D V ++D
Sbjct: 241 KVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 52.8 bits (121), Expect = 5e-07
Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 141 IISYSDDKSVGLWDIST---EERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYD 197
+I+ D SV ++D + I +F EH +++ +P D L+ S+D TVKL+
Sbjct: 76 LIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWA 135
Query: 198 CRSNETIMTVN-HGSPVESTLFLPS-GGIFISAGGT-EIKVWDIFNGGKLLSNISQHHKT 254
++ T H V ++ P G +F SA G +++WD+ G + + +
Sbjct: 136 MDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEI 195
Query: 255 VTTLRLASNNSRLMSASLDRHVKIYDVSTFKV 286
++ ++ L ++S+D+ VK++DV +++V
Sbjct: 196 LSCDWNKYDDCILATSSVDKTVKVWDVRSYRV 227
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 55.6 bits (128), Expect = 8e-08
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 18/193 (9%)
Query: 109 KLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHT 168
K+F V K L F GH+G + ++K+ +++S S D SV LW I E+ + F+ H
Sbjct: 340 KIFRVLDKP-LHEFLGHSGDILDISWSKNN-RLLSASVDNSVRLWQIGCEDCLGIFS-HN 396
Query: 169 DYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSG-GIFIS 227
+Y+ + +P+ D +SGS D V+++ + + + V + + P G + I
Sbjct: 397 NYVTSVQFNPVDDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPDGQAVIIG 456
Query: 228 AGGTEIKVWDIFNGG-KLLSNISQHHKTVTT----------LRLASNN-SRLMSASLDRH 275
++ + +++ +L +I H+K ++ L+ S + SR+M AS D
Sbjct: 457 TLTSDCRFYNVSGHCLQLDGHICLHNKKKSSNKRIIGFQFLLQFDSTDPSRVMVASADSQ 516
Query: 276 VKIYDVSTFKVVH 288
V+I +S VVH
Sbjct: 517 VRI--ISGRNVVH 527
Score = 32.3 bits (70), Expect = 0.82
Identities = 53/232 (22%), Positives = 89/232 (38%), Gaps = 30/232 (12%)
Query: 96 GRLLVAG--IEEAAVKLFDVQSKNVLRVFTG-----HTGPVHRTFFTKDQLKIISYSDDK 148
G + V G IE VK + ++K + +F G H G + F+ D + S +D
Sbjct: 214 GEVAVCGSRIERVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRYLASAGEDG 273
Query: 149 SVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN 208
+ +W + +ER EH I P I Y KL + R
Sbjct: 274 VLRVWSVVEDERC---EEHD-------VPKIDPSCI----YFEVSKLSELRPVAVEKDGI 319
Query: 209 HGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLM 268
GS + S + I K++ + + K L H + + + NN RL+
Sbjct: 320 TGSLMSPRKTTESACVIIPP-----KIFRVLD--KPLHEFLGHSGDILDISWSKNN-RLL 371
Query: 269 SASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISE-HDDILTVGMMDGIISI 319
SAS+D V+++ + + N + S+ + DD G +DG + I
Sbjct: 372 SASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRI 423
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 97 RLLVAGIEEAAVKLFDVQSKNVLRVFTG--HTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
R++VA + + V++ + +NV+ + G + G FT D I+S DD SV +W+
Sbjct: 507 RVMVASAD-SQVRI--ISGRNVVHKYKGSRNAGNQISASFTADGKHIVSACDDSSVYVWN 563
Query: 155 I---STEERIANFNEHTDYIRAGAASPISPDI 183
E+ F HT ++ + S D+
Sbjct: 564 CVGHDPEQSSPGFFSHTKRLKIRSFEKFSADV 595
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 55.6 bits (128), Expect = 8e-08
Identities = 68/308 (22%), Positives = 130/308 (42%), Gaps = 25/308 (8%)
Query: 60 ATCSVRVQVYDPVTKVVAKNISKFVEAAYGGC--FRADGRLLVAGIEEAAVKLFDVQSKN 117
+T V++++P T + I ++ YG C + + G + +++ D+ S
Sbjct: 423 STSHSEVKIWNPSTGSCLRTI----DSGYGLCSLIVPQNKYGIVGTKSGVLEIIDIGSAT 478
Query: 118 VLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEER---------IANFN--E 166
+ H G + + ++ S D V W+ +++ ++N +
Sbjct: 479 KVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMK 538
Query: 167 HTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV-NHGSPVESTLFLPSGGIF 225
D + A A SP + I ++ D TVK++ S + +++ H PV + + S G
Sbjct: 539 MNDDVLAVAISPDAKHIAVA-LLDSTVKVFYMDSLKFYLSLYGHKLPV-MCIDISSDGEL 596
Query: 226 ISAGGTE--IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVST 283
I G + +K+W + + G +I H +V ++ N L S DR VK +D
Sbjct: 597 IVTGSQDKNLKIWGL-DFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADK 655
Query: 284 FKVVHNIDFPNA-ILSMAISEHDDILTVGMMDGIISIRKR-EEPVRQSEKRKNLLKFIPD 341
F+ + ++ +A I +AIS D L G D + R EEP E+++ L+ + +
Sbjct: 656 FEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSEEPFFLEEEKEKRLEELFE 715
Query: 342 HTSQTKAD 349
AD
Sbjct: 716 SEIDNAAD 723
Score = 43.2 bits (97), Expect = 4e-04
Identities = 30/154 (19%), Positives = 71/154 (46%), Gaps = 4/154 (2%)
Query: 66 VQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGH 125
++++D N + A + G +L +G ++ + L+DV ++ L GH
Sbjct: 88 IRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGH 147
Query: 126 TGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIIL 185
V F K++S S DK + +WD+ T+ + + H + + P ++
Sbjct: 148 RDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDP-EERYVV 206
Query: 186 SGSYDHTVKLY---DCRSNETIMTVNHGSPVEST 216
+GS D ++ Y + SN ++++ ++ + ++++
Sbjct: 207 TGSADQELRFYAVKEYSSNGSLVSDSNANEIKAS 240
Score = 36.7 bits (81), Expect = 0.038
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 2/119 (1%)
Query: 98 LLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 157
L+ G + +++++D + F H G V + K + S S D + LWD+
Sbjct: 78 LVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVG 137
Query: 158 EERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN-HGSPVES 215
E + H D + ++S S D ++++D + + V+ H S V S
Sbjct: 138 ESGLFRLRGHRDQV-TDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWS 195
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 251 HHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTV 310
H V ++ L+ +N+ LMS S VKI++ ST + ID + S+ + ++ + V
Sbjct: 405 HRSDVRSVTLSEDNTLLMSTS-HSEVKIWNPSTGSCLRTIDSGYGLCSLIVPQNKYGI-V 462
Query: 311 GMMDGIISI 319
G G++ I
Sbjct: 463 GTKSGVLEI 471
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 54.8 bits (126), Expect = 1e-07
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW- 153
+G LV G + L++V + +L+ + GH V F+ D ++S S D S+ +W
Sbjct: 89 EGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWS 148
Query: 154 ------DISTEERIA----NFNEHTDYIRAGAASPISPD-IILSGSYDHTVKLYDCRSNE 202
D ++ NFNEHT + + +I+S S D T K++ +
Sbjct: 149 LIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGK 208
Query: 203 TIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVW-DIFN-----GGKLLSNISQHHKTVT 256
+ + S V + L L GG AG + K++ N G ++L ++S+ K +T
Sbjct: 209 LLKNIIFPS-VINALALDPGGCVFYAGARDSKIYIGAINATSEYGTQVLGSVSEKGKAIT 267
Query: 257 TLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNI 290
L ++ + L+S S D V ++D + + V +
Sbjct: 268 CLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTL 301
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 53.6 bits (123), Expect = 3e-07
Identities = 54/239 (22%), Positives = 108/239 (45%), Gaps = 22/239 (9%)
Query: 110 LFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTD 169
+F + K V F GH V ++K Q ++S S DK+V LWD+S++ + F+ H+D
Sbjct: 453 VFGLSEKPVCS-FVGHLDDVLDLSWSKSQ-HLLSSSMDKTVRLWDLSSKTCLKVFS-HSD 509
Query: 170 YIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSG-GIFISA 228
Y+ +P+ + +SGS D V+++ ++ + + V + + P G G + +
Sbjct: 510 YVTCIQFNPVDDNYFISGSLDAKVRIWSIPDHQVVDWNDLHEMVTAACYTPDGQGALVGS 569
Query: 229 GGTEIKVWDIFNGGKL-------LSNISQ--HHKTVTTLR-LASNNSRLMSASLDRHVKI 278
+++ + KL L N + HHK +T + +A ++S ++ S D ++
Sbjct: 570 YKGTCCLYNT-HDNKLQQRREINLKNRKKKTHHKKITGFQFVAGSSSEVLVTSADSRTRV 628
Query: 279 YD----VSTFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISIRKREEPVRQSEKRK 333
D V FK N N+ +S +++ + L D + + + R ++
Sbjct: 629 VDGVDLVHKFKGFRN---TNSQISASLTSNGKFLVSASEDSNVYVWNYDSDSRAGRSKR 684
Score = 45.2 bits (102), Expect = 1e-04
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 13/193 (6%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE 158
L++ + V+L+D+ SK L+VF+ F D IS S D V +W I +
Sbjct: 482 LLSSSMDKTVRLWDLSSKTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWSI-PD 540
Query: 159 ERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSN--ETIMTVNHGSPVEST 216
++ ++N+ + + A +P ++ GSY T LY+ N + +N + + T
Sbjct: 541 HQVVDWNDLHEMVTAACYTPDGQGALV-GSYKGTCCLYNTHDNKLQQRREINLKNRKKKT 599
Query: 217 LFLPSGGI-FISAGGTEIKVWDIFNGGKLLSNISQHHK--------TVTTLRLASNNSRL 267
G F++ +E+ V + +++ + HK + + L SN L
Sbjct: 600 HHKKITGFQFVAGSSSEVLVTSADSRTRVVDGVDLVHKFKGFRNTNSQISASLTSNGKFL 659
Query: 268 MSASLDRHVKIYD 280
+SAS D +V +++
Sbjct: 660 VSASEDSNVYVWN 672
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 53.6 bits (123), Expect = 3e-07
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 125 HTGPVHRTFFTKDQLKII-SYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
HT V + K+ I+ S S DK V +WD++T HT ++A A + +P++
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 184 ILSGSYDHTVKLYDCRS-NETIMTVNHGSPVESTLFLPSG--GIFISAGGTEIKVWDIFN 240
+LSGS+D TV L D R + + + S VES + P +S +K +D+
Sbjct: 292 LLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQ 351
Query: 241 GGKLLS------NISQHHKTVTTLRL-ASNNSRLMSASLDRHVKIYDVS 282
S I+ H + T++ S + L + S DR VK++D+S
Sbjct: 352 ASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLS 400
Score = 41.5 bits (93), Expect = 0.001
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 155 ISTEERIANF--NEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSP 212
IS E +F N H + + + + +P+++ +GS D TVKL+D +NE H
Sbjct: 354 ISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPN 413
Query: 213 VESTLFL---PSGGIFISAGGT--EIKVWD 237
F+ P ++ GG E+K+WD
Sbjct: 414 AGGLFFIAFSPDNPFLLAMGGVMGELKLWD 443
Score = 35.5 bits (78), Expect = 0.088
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 100 VAGIEEAAVKLFDVQSKNVLRV-----FT--GHTGPVHRTFFTKDQLKIISY-SDDKSVG 151
V +E+ VK FDV+ ++ FT GH + +++ S D++V
Sbjct: 336 VVSLEDGTVKGFDVRQASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVK 395
Query: 152 LWDISTEER--IANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNH 209
LWD+S E IA N + + A SP +P ++ G +KL+D S +T ++ +
Sbjct: 396 LWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWDTLS-DTNVSSRY 454
Query: 210 GS 211
GS
Sbjct: 455 GS 456
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 53.2 bits (122), Expect = 4e-07
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 16/218 (7%)
Query: 43 GAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAG 102
G + LD++P +A+ R+ V++ +T I F +G+ + G
Sbjct: 66 GKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACG 125
Query: 103 IEEAAVKLFDVQSKN-------VLRVFTGHTGPVHRT-FFTKDQLKIISYSDDKSVGLWD 154
++ +F + S V R+ TGH G V + + +I+ S D++ LWD
Sbjct: 126 GLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWD 185
Query: 155 ISTEERIANF-----NEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNH 209
++T + + F + HT + + + S +P+ +SGS D T +L+D R+ + H
Sbjct: 186 VTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFH 245
Query: 210 G--SPVESTLFLPSGGIF-ISAGGTEIKVWDIFNGGKL 244
G V + F P G F + +++DI G +L
Sbjct: 246 GHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQL 283
Score = 39.1 bits (87), Expect = 0.007
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 16/176 (9%)
Query: 120 RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPI 179
R GHTG V+ +T ++ +I+S S D + +W+ T ++ ++ A SP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP- 117
Query: 180 SPDIILSGSYDHTVKLYDCRS----NETI----MTVNHGSPVESTLFLPS--GGIFISAG 229
+ + G D ++ S + T+ M H V ++P+ + S+G
Sbjct: 118 NGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG 177
Query: 230 GTEIKVWDIFNGGK--LLSNISQHHKTVTTLRLA---SNNSRLMSASLDRHVKIYD 280
+WD+ G K + Q T L ++ SN + +S S D +++D
Sbjct: 178 DQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWD 233
Score = 38.3 bits (85), Expect = 0.012
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 100 VAGIEEAAVKLFDVQSKN-VLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE 158
++G ++ +L+D ++ + +R F GH G V+ F D + + SDD + L+DI T
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Query: 159 ERIANFNEHTD 169
++ + H D
Sbjct: 281 HQLQVYQPHGD 291
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVF----TGHTGPVHR-TFFTKDQLKIISYSD 146
F DG G ++ +L+D+++ + L+V+ G GPV F +L Y+
Sbjct: 256 FFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYAS 315
Query: 147 DKSVGLWD 154
+ + +WD
Sbjct: 316 NNTCYVWD 323
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 53.2 bits (122), Expect = 4e-07
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 16/218 (7%)
Query: 43 GAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAG 102
G + LD++P +A+ R+ V++ +T I F +G+ + G
Sbjct: 66 GKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACG 125
Query: 103 IEEAAVKLFDVQSKN-------VLRVFTGHTGPVHRT-FFTKDQLKIISYSDDKSVGLWD 154
++ +F + S V R+ TGH G V + + +I+ S D++ LWD
Sbjct: 126 GLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWD 185
Query: 155 ISTEERIANF-----NEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNH 209
++T + + F + HT + + + S +P+ +SGS D T +L+D R+ + H
Sbjct: 186 VTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFH 245
Query: 210 G--SPVESTLFLPSGGIF-ISAGGTEIKVWDIFNGGKL 244
G V + F P G F + +++DI G +L
Sbjct: 246 GHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQL 283
Score = 39.9 bits (89), Expect = 0.004
Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 100 VAGIEEAAVKLFDVQSKN-VLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE 158
++G ++ +L+D ++ + +R F GH G V+ F D + + SDD + L+DI T
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Query: 159 ERIANFNEHTDYIRAGAAS---PISPDIILSG-SYDHTVKLYDCRSNETIMTV-----NH 209
++ + H D S +S ++ +G + ++T ++D E ++ + +H
Sbjct: 281 HQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSH 340
Query: 210 GSPVESTLFLPSGGIFISAGG--TEIKVW 236
+ + S L L + G + G + +K+W
Sbjct: 341 RNRI-SCLGLSADGSALCTGSWDSNLKIW 368
Score = 39.1 bits (87), Expect = 0.007
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 16/176 (9%)
Query: 120 RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPI 179
R GHTG V+ +T ++ +I+S S D + +W+ T ++ ++ A SP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP- 117
Query: 180 SPDIILSGSYDHTVKLYDCRS----NETI----MTVNHGSPVESTLFLPS--GGIFISAG 229
+ + G D ++ S + T+ M H V ++P+ + S+G
Sbjct: 118 NGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG 177
Query: 230 GTEIKVWDIFNGGK--LLSNISQHHKTVTTLRLA---SNNSRLMSASLDRHVKIYD 280
+WD+ G K + Q T L ++ SN + +S S D +++D
Sbjct: 178 DQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWD 233
Score = 33.1 bits (72), Expect = 0.47
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVF----TGHTGPVHR-TFFTKDQLKIISYSD 146
F DG G ++ +L+D+++ + L+V+ G GPV F +L Y+
Sbjct: 256 FFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYAS 315
Query: 147 DKSVGLWDISTEERIANFNEHTDYIRAG-AASPISPD--IILSGSYDHTVKLY 196
+ + +WD E + + D R + +S D + +GS+D +K++
Sbjct: 316 NNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIW 368
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 52.4 bits (120), Expect = 7e-07
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 109 KLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHT 168
K+F + K + F GHTG V ++KD ++S S DK+V LW + + + + F H
Sbjct: 312 KVFRIMEKPLYE-FRGHTGEVLDISWSKDNY-LLSASMDKTVRLWKVGSNDCLGVF-AHN 368
Query: 169 DYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLP--SGGIFI 226
Y+ + +P++ + +SGS D V++++ + + + + + P GGI
Sbjct: 369 SYVTSVQFNPVNENYFMSGSIDGKVRIWNISGCSVVDWADLKDIISAVCYRPDGQGGIIG 428
Query: 227 SAGGT 231
S G+
Sbjct: 429 SLNGS 433
Score = 35.1 bits (77), Expect = 0.12
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 158 EERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTL 217
E+ + F HT + + S + +LS S D TV+L+ SN+ + H S V S
Sbjct: 318 EKPLYEFRGHTGEVLDISWS--KDNYLLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQ 375
Query: 218 FLPSGGIFISAGGTE--IKVWDI 238
F P + +G + +++W+I
Sbjct: 376 FNPVNENYFMSGSIDGKVRIWNI 398
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 52.4 bits (120), Expect = 7e-07
Identities = 46/224 (20%), Positives = 97/224 (43%), Gaps = 13/224 (5%)
Query: 122 FTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISP 181
F GH V ++K Q ++S S DK+V LW++S++ + F+ H+DY+ +P+
Sbjct: 509 FQGHVDDVLDLAWSKSQ-HLLSSSMDKTVRLWNLSSQTCLKVFS-HSDYVTCIQFNPVDD 566
Query: 182 DIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSG-GIFISAGGTEIKVWDIFN 240
+SGS D V+++ + + + V S + P G G+ + + +++ +
Sbjct: 567 RYFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKGSCRMYSASD 626
Query: 241 G---GKLLSNISQ-----HHKTVTTLR-LASNNSRLMSASLDRHVKIYD-VSTFKVVHNI 290
K N+ H K +T + + ++S ++ S D +++ D +
Sbjct: 627 NKLQQKSQINLQNKKKKAHQKKITGFQFVPGSSSEVLVTSSDSRIRVVDGTDLVNKLKGF 686
Query: 291 DFPNAILSMAISEHDDILTVGMMDGIISIRKREEPVRQSEKRKN 334
++ +S +I+ + D + I K E P + + N
Sbjct: 687 RNTSSQISASITADGKYVVSASEDSHVYIWKYESPASRPSRSNN 730
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 52.4 bits (120), Expect = 7e-07
Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 17/212 (8%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
+ +G LL + ++ L+ + L + GH G V ++D ++I+ S D++
Sbjct: 18 YNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAK 77
Query: 152 LWDISTEERIANFN-----EHTDYIRAGAASPISPDIILSGSYDHTVKLY-------DCR 199
LWD+ + + + F D+ + I+ D + + VK D
Sbjct: 78 LWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVKRIAEDPEEQDAE 137
Query: 200 SNETIMTVNHGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQ---HHKTV 255
S + + + ++ P +S G + I++WD GKLL + H K +
Sbjct: 138 SVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDA-ETGKLLKQSDEEVGHKKDI 196
Query: 256 TTLRLASNNSRLMSASLDRHVKIYDVSTFKVV 287
T+L A+++S ++ SLD+ K++D+ T ++
Sbjct: 197 TSLCKAADDSHFLTGSLDKTAKLWDMRTLTLL 228
Score = 41.5 bits (93), Expect = 0.001
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
GH P+ + ++ + S + D + LW ER+ + H + S S +
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 184 ILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLF 218
I +GS D T KL+D +S + + T +P S F
Sbjct: 68 I-TGSADQTAKLWDVKSGKELFTFKFNAPTRSVDF 101
Score = 35.9 bits (79), Expect = 0.066
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 141 IISYSDDKSVGLWDISTEERIANFNEHTDYIR--AGAASPISPDIILSGSYDHTVKLYDC 198
I+S +DK + +WD T + + +E + + L+GS D T KL+D
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Query: 199 RSNETIMTVNHGSPVESTLFLP 220
R+ + T PV + P
Sbjct: 223 RTLTLLKTYTTVVPVNAVSLSP 244
Score = 34.7 bits (76), Expect = 0.15
Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 5/143 (3%)
Query: 204 IMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASN 263
I+ H P+ + G + S + G+ L H+ V ++ +
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRD 63
Query: 264 NSRLMSASLDRHVKIYDVSTFKVVHNIDF--PNAILSMAISEHDDILTVG-MMD--GIIS 318
+SRL++ S D+ K++DV + K + F P + A+ + ++T +D I
Sbjct: 64 SSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIH 123
Query: 319 IRKREEPVRQSEKRKNLLKFIPD 341
+++ E + + L+ PD
Sbjct: 124 VKRIAEDPEEQDAESVLVLHCPD 146
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 52.4 bits (120), Expect = 7e-07
Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 17/212 (8%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
+ +G LL + ++ L+ + L + GH G V ++D ++I+ S D++
Sbjct: 18 YNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAK 77
Query: 152 LWDISTEERIANFN-----EHTDYIRAGAASPISPDIILSGSYDHTVKLY-------DCR 199
LWD+ + + + F D+ + I+ D + + VK D
Sbjct: 78 LWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVKRIAEDPEEQDAE 137
Query: 200 SNETIMTVNHGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQ---HHKTV 255
S + + + ++ P +S G + I++WD GKLL + H K +
Sbjct: 138 SVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDA-ETGKLLKQSDEEVGHKKDI 196
Query: 256 TTLRLASNNSRLMSASLDRHVKIYDVSTFKVV 287
T+L A+++S ++ SLD+ K++D+ T ++
Sbjct: 197 TSLCKAADDSHFLTGSLDKTAKLWDMRTLTLL 228
Score = 41.5 bits (93), Expect = 0.001
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
GH P+ + ++ + S + D + LW ER+ + H + S S +
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 184 ILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLF 218
I +GS D T KL+D +S + + T +P S F
Sbjct: 68 I-TGSADQTAKLWDVKSGKELFTFKFNAPTRSVDF 101
Score = 38.3 bits (85), Expect = 0.012
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 18/148 (12%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRVF---TGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 155
+V+G E+ ++++D ++ +L+ GH + D ++ S DK+ LWD+
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Query: 156 STEERIANFNEHTDYIRAGAASPISPDIILSGSYDHT-------------VKLYDCRSNE 202
T + + + A + SP+ ++L G D + K YD E
Sbjct: 223 RTLTLLKTYTTVVP-VNAVSLSPLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQE 281
Query: 203 TIMTV-NHGSPVESTLFLPSGGIFISAG 229
I V H P+ + F P G F S G
Sbjct: 282 EIGGVKGHFGPINALAFNPDGKSFSSGG 309
Score = 37.5 bits (83), Expect = 0.022
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 141 IISYSDDKSVGLWDISTEERIANFNEHTDYIR--AGAASPISPDIILSGSYDHTVKLYDC 198
I+S +DK + +WD T + + +E + + L+GS D T KL+D
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Query: 199 RSNETIMTVNHGSPVESTLFLPSGGIFISAGGTE 232
R+ + T PV + P + GG +
Sbjct: 223 RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
Score = 34.7 bits (76), Expect = 0.15
Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 5/143 (3%)
Query: 204 IMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASN 263
I+ H P+ + G + S + G+ L H+ V ++ +
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRD 63
Query: 264 NSRLMSASLDRHVKIYDVSTFKVVHNIDF--PNAILSMAISEHDDILTVG-MMD--GIIS 318
+SRL++ S D+ K++DV + K + F P + A+ + ++T +D I
Sbjct: 64 SSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIH 123
Query: 319 IRKREEPVRQSEKRKNLLKFIPD 341
+++ E + + L+ PD
Sbjct: 124 VKRIAEDPEEQDAESVLVLHCPD 146
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 52.4 bits (120), Expect = 7e-07
Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 17/212 (8%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
+ +G LL + ++ L+ + L + GH G V ++D ++I+ S D++
Sbjct: 18 YNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAK 77
Query: 152 LWDISTEERIANFN-----EHTDYIRAGAASPISPDIILSGSYDHTVKLY-------DCR 199
LWD+ + + + F D+ + I+ D + + VK D
Sbjct: 78 LWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVKRIAEDPEEQDAE 137
Query: 200 SNETIMTVNHGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQ---HHKTV 255
S + + + ++ P +S G + I++WD GKLL + H K +
Sbjct: 138 SVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDA-ETGKLLKQSDEEVGHKKDI 196
Query: 256 TTLRLASNNSRLMSASLDRHVKIYDVSTFKVV 287
T+L A+++S ++ SLD+ K++D+ T ++
Sbjct: 197 TSLCKAADDSHFLTGSLDKTAKLWDMRTLTLL 228
Score = 41.5 bits (93), Expect = 0.001
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
GH P+ + ++ + S + D + LW ER+ + H + S S +
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 184 ILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLF 218
I +GS D T KL+D +S + + T +P S F
Sbjct: 68 I-TGSADQTAKLWDVKSGKELFTFKFNAPTRSVDF 101
Score = 38.3 bits (85), Expect = 0.012
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 18/148 (12%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRVF---TGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 155
+V+G E+ ++++D ++ +L+ GH + D ++ S DK+ LWD+
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Query: 156 STEERIANFNEHTDYIRAGAASPISPDIILSGSYDHT-------------VKLYDCRSNE 202
T + + + A + SP+ ++L G D + K YD E
Sbjct: 223 RTLTLLKTYTTVVP-VNAVSLSPLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQE 281
Query: 203 TIMTV-NHGSPVESTLFLPSGGIFISAG 229
I V H P+ + F P G F S G
Sbjct: 282 EIGGVKGHFGPINALAFNPDGKSFSSGG 309
Score = 37.5 bits (83), Expect = 0.022
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 141 IISYSDDKSVGLWDISTEERIANFNEHTDYIR--AGAASPISPDIILSGSYDHTVKLYDC 198
I+S +DK + +WD T + + +E + + L+GS D T KL+D
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Query: 199 RSNETIMTVNHGSPVESTLFLPSGGIFISAGGTE 232
R+ + T PV + P + GG +
Sbjct: 223 RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
Score = 34.7 bits (76), Expect = 0.15
Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 5/143 (3%)
Query: 204 IMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASN 263
I+ H P+ + G + S + G+ L H+ V ++ +
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRD 63
Query: 264 NSRLMSASLDRHVKIYDVSTFKVVHNIDF--PNAILSMAISEHDDILTVG-MMD--GIIS 318
+SRL++ S D+ K++DV + K + F P + A+ + ++T +D I
Sbjct: 64 SSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIH 123
Query: 319 IRKREEPVRQSEKRKNLLKFIPD 341
+++ E + + L+ PD
Sbjct: 124 VKRIAEDPEEQDAESVLVLHCPD 146
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 52.0 bits (119), Expect = 9e-07
Identities = 51/228 (22%), Positives = 104/228 (45%), Gaps = 14/228 (6%)
Query: 66 VQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKN-VLRVFTG 124
VQV+D V+ + + E+ G + +L G + + DV+ ++ ++ + G
Sbjct: 176 VQVWDCVSNRHVRTLRGGHESRVGS-LAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVG 234
Query: 125 HTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS------TEERIANFNEHTDYIRAGAASP 178
HT V +++ K+ S +D V +WD S T + + F EHT +RA A P
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCP 294
Query: 179 ISPDIILSGS--YDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGG---TEI 233
++ +G D + ++ + + +V GS V S L+ S +SA G ++
Sbjct: 295 FQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQL 354
Query: 234 KVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDV 281
+W + K ++ ++ H V + + + + SA+ D +++++V
Sbjct: 355 TLWKYPSMVK-MAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 401
Score = 29.9 bits (64), Expect = 4.4
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 7/135 (5%)
Query: 108 VKLFDVQSKNVLRVFT--GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFN 165
V L+D S ++ T GPV +T+D L + D+ V +WD + +
Sbjct: 132 VYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLR 191
Query: 166 EHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIM--TVNHGSPVESTLFLPSGG 223
+ R G+ + + I+ +G D + D R +I+ V H V + SG
Sbjct: 192 GGHE-SRVGSLA-WNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGK 249
Query: 224 IFISAGGTE-IKVWD 237
S G + +WD
Sbjct: 250 KLASGGNDNVVHIWD 264
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 52.0 bits (119), Expect = 9e-07
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 16/213 (7%)
Query: 48 LDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAA 107
LD++P +A+ R+ V++ +T I F +G+ + G ++
Sbjct: 9 LDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSV 68
Query: 108 VKLFDVQSKN-------VLRVFTGHTGPVHRT-FFTKDQLKIISYSDDKSVGLWDISTEE 159
+F + S V R+ TGH G V + + +I+ S D++ LWD++T
Sbjct: 69 CSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGL 128
Query: 160 RIANF-----NEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHG--SP 212
+ + F + HT + + + S +P+ +SGS D T +L+D R+ + HG
Sbjct: 129 KTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGD 188
Query: 213 VESTLFLPSGGIF-ISAGGTEIKVWDIFNGGKL 244
V + F P G F + +++DI G +L
Sbjct: 189 VNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQL 221
Score = 39.9 bits (89), Expect = 0.004
Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 100 VAGIEEAAVKLFDVQSKN-VLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE 158
++G ++ +L+D ++ + +R F GH G V+ F D + + SDD + L+DI T
Sbjct: 159 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 218
Query: 159 ERIANFNEHTDYIRAGAAS---PISPDIILSG-SYDHTVKLYDCRSNETIMTV-----NH 209
++ + H D S +S ++ +G + ++T ++D E ++ + +H
Sbjct: 219 HQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSH 278
Query: 210 GSPVESTLFLPSGGIFISAGG--TEIKVW 236
+ + S L L + G + G + +K+W
Sbjct: 279 RNRI-SCLGLSADGSALCTGSWDSNLKIW 306
Score = 33.1 bits (72), Expect = 0.47
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVF----TGHTGPVHR-TFFTKDQLKIISYSD 146
F DG G ++ +L+D+++ + L+V+ G GPV F +L Y+
Sbjct: 194 FFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYAS 253
Query: 147 DKSVGLWDISTEERIANFNEHTDYIRAG-AASPISPD--IILSGSYDHTVKLY 196
+ + +WD E + + D R + +S D + +GS+D +K++
Sbjct: 254 NNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIW 306
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 52.0 bits (119), Expect = 9e-07
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 86 AAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYS 145
A Y F GR ++ G ++ VK++ +++ L GH G + + + + S S
Sbjct: 307 AVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASAS 366
Query: 146 DDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI--ILSGSYDHTVKLYDCRSNET 203
+D + +W + I+ HT + A A SP + +LS S D T +++D R ++
Sbjct: 367 NDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQW 426
Query: 204 IMTVNHGSPVES 215
+ + SP ++
Sbjct: 427 LPRIYVPSPSDA 438
Score = 37.1 bits (82), Expect = 0.029
Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 8/156 (5%)
Query: 89 GGCFRADGRL--LVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSD 146
GG FR R +++ A VQ ++ GH V+ F + +I+ SD
Sbjct: 266 GGGFRKHHRAPSILSACHAIAKPSTMVQKMQNIKKLRGHRNAVYCAIFDRSGRYVITGSD 325
Query: 147 DKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMT 206
D+ V +W + T +A+ H I A S + ++ S S D ++++ I
Sbjct: 326 DRLVKIWSMETALCLASCRGHEGDITDLAVSS-NNALVASASNDFVIRVWRLPDGMPISV 384
Query: 207 V-NHGSPVESTLFLPSGG----IFISAGGTEIKVWD 237
+ H V + F P + S+ ++WD
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 209 HGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRL 267
H + V +F SG I+ +K+W + L++ H +T L ++SNN+ +
Sbjct: 304 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSM-ETALCLASCRGHEGDITDLAVSSNNALV 362
Query: 268 MSASLDRHVKIY 279
SAS D ++++
Sbjct: 363 ASASNDFVIRVW 374
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 51.6 bits (118), Expect = 1e-06
Identities = 52/237 (21%), Positives = 108/237 (45%), Gaps = 23/237 (9%)
Query: 72 VTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDV-----------QSKNVLR 120
+ K +K +S+ F DG G + ++KLF+V Q++ ++R
Sbjct: 19 IPKHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIR 78
Query: 121 VFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS--TEERIANFNEHTDYIRAGAASP 178
F H P++ F +IS + D + +D S T +R + T +R+ + P
Sbjct: 79 TFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHP 138
Query: 179 ISPDIILSGSYDHTV-KLYDCRSNETIMTVNH-----GSPVESTLFLPSGGIFISAG-GT 231
S + +L+G+ DH + LYD + + + N + + +G I+I+A
Sbjct: 139 -SGEFLLAGT-DHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDG 196
Query: 232 EIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSR-LMSASLDRHVKIYDVSTFKVV 287
I+++D + + S + H K+ T + + + R ++S+ D VK++++ + ++V
Sbjct: 197 AIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMV 253
Score = 42.7 bits (96), Expect = 6e-04
Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 7/152 (4%)
Query: 92 FRADGRLLVAGIEEAAVKLFD-VQSKNVLRVFTGH-TGPVHRTFFTKDQLKIISYSDDKS 149
+ + G + + ++ A++LFD V +K V + H V FTKDQ ++S D +
Sbjct: 182 YSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDST 241
Query: 150 VGLWDISTEERIANF-NEHTDYIRAGAASPISPDIILS-GSYDHTVKLYDCRSNETI--M 205
V LW+I + + + +R+ A + + ++S + V +D R+ + +
Sbjct: 242 VKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKW 301
Query: 206 TVNHGSPVESTLFLPSGGIFISAG-GTEIKVW 236
NH P +F++ G I+ W
Sbjct: 302 PSNHNGAPRWIEHSPVESVFVTCGIDRSIRFW 333
Score = 39.5 bits (88), Expect = 0.005
Identities = 50/251 (19%), Positives = 96/251 (38%), Gaps = 14/251 (5%)
Query: 45 IDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGG---CFRADGRLLVA 101
I+ LDF P ++ ++ +D +K AK K + + F G L+A
Sbjct: 87 INDLDFHPRSTILISSAKDNCIKFFD-FSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLA 145
Query: 102 GIEEAAVKLFDVQSKNVLRVF----TGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 157
G + L+DV + +G +G +++ ++ I+ S D ++ L+D +
Sbjct: 146 GTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVS 205
Query: 158 EERIANF-NEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVE-- 214
+ + + N H A +LS D TVKL++ S + V+
Sbjct: 206 AKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLR 265
Query: 215 -STLFLPSGGIFISA--GGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSAS 271
+F + IS E+ WD K+ S H+ + + S ++
Sbjct: 266 SQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCG 325
Query: 272 LDRHVKIYDVS 282
+DR ++ + S
Sbjct: 326 IDRSIRFWKES 336
Score = 31.5 bits (68), Expect = 1.4
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 15/153 (9%)
Query: 165 NEHTDYIRAGAASPISPDIILSGSYDHTVKLY-----------DCRSNETIMTV-NHGSP 212
+EH +R SP +G D ++KL+ D ++ I T +H P
Sbjct: 28 SEHKSVVRCARFSPDGM-FFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEP 86
Query: 213 VESTLFLPSGGIFISAGGTE-IKVWDIFNG-GKLLSNISQHHKTVTTLRLASNNSRLMSA 270
+ F P I IS+ IK +D K + Q V ++ + L++
Sbjct: 87 INDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAG 146
Query: 271 SLDRHVKIYDVSTFKVVHNIDFPNAILSMAISE 303
+ +YDV+T++ +FP++ +S AI++
Sbjct: 147 TDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQ 179
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 51.6 bits (118), Expect = 1e-06
Identities = 52/237 (21%), Positives = 108/237 (45%), Gaps = 23/237 (9%)
Query: 72 VTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDV-----------QSKNVLR 120
+ K +K +S+ F DG G + ++KLF+V Q++ ++R
Sbjct: 111 IPKHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIR 170
Query: 121 VFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS--TEERIANFNEHTDYIRAGAASP 178
F H P++ F +IS + D + +D S T +R + T +R+ + P
Sbjct: 171 TFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHP 230
Query: 179 ISPDIILSGSYDHTV-KLYDCRSNETIMTVNH-----GSPVESTLFLPSGGIFISAG-GT 231
S + +L+G+ DH + LYD + + + N + + +G I+I+A
Sbjct: 231 -SGEFLLAGT-DHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDG 288
Query: 232 EIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSR-LMSASLDRHVKIYDVSTFKVV 287
I+++D + + S + H K+ T + + + R ++S+ D VK++++ + ++V
Sbjct: 289 AIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMV 345
Score = 42.7 bits (96), Expect = 6e-04
Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 7/152 (4%)
Query: 92 FRADGRLLVAGIEEAAVKLFD-VQSKNVLRVFTGH-TGPVHRTFFTKDQLKIISYSDDKS 149
+ + G + + ++ A++LFD V +K V + H V FTKDQ ++S D +
Sbjct: 274 YSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDST 333
Query: 150 VGLWDISTEERIANF-NEHTDYIRAGAASPISPDIILS-GSYDHTVKLYDCRSNETI--M 205
V LW+I + + + +R+ A + + ++S + V +D R+ + +
Sbjct: 334 VKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKW 393
Query: 206 TVNHGSPVESTLFLPSGGIFISAG-GTEIKVW 236
NH P +F++ G I+ W
Sbjct: 394 PSNHNGAPRWIEHSPVESVFVTCGIDRSIRFW 425
Score = 39.5 bits (88), Expect = 0.005
Identities = 50/251 (19%), Positives = 96/251 (38%), Gaps = 14/251 (5%)
Query: 45 IDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGG---CFRADGRLLVA 101
I+ LDF P ++ ++ +D +K AK K + + F G L+A
Sbjct: 179 INDLDFHPRSTILISSAKDNCIKFFD-FSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLA 237
Query: 102 GIEEAAVKLFDVQSKNVLRVF----TGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 157
G + L+DV + +G +G +++ ++ I+ S D ++ L+D +
Sbjct: 238 GTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVS 297
Query: 158 EERIANF-NEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVE-- 214
+ + + N H A +LS D TVKL++ S + V+
Sbjct: 298 AKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLR 357
Query: 215 -STLFLPSGGIFISA--GGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSAS 271
+F + IS E+ WD K+ S H+ + + S ++
Sbjct: 358 SQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCG 417
Query: 272 LDRHVKIYDVS 282
+DR ++ + S
Sbjct: 418 IDRSIRFWKES 428
Score = 31.9 bits (69), Expect = 1.1
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 15/176 (8%)
Query: 142 ISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLY----- 196
I +S + + G + +EH +R SP +G D ++KL+
Sbjct: 97 IDFSVNHAKGSSKTIPKHESKTLSEHKSVVRCARFSPDGM-FFATGGADTSIKLFEVPKV 155
Query: 197 ------DCRSNETIMTV-NHGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNG-GKLLSN 247
D ++ I T +H P+ F P I IS+ IK +D K
Sbjct: 156 KQMISGDTQARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFK 215
Query: 248 ISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISE 303
+ Q V ++ + L++ + +YDV+T++ +FP++ +S AI++
Sbjct: 216 VFQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQ 271
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 51.2 bits (117), Expect = 2e-06
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 108 VKLFDVQSKNV---LRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANF 164
++LFD++S N +R F HT V F + S S+D SV +WD+ E F
Sbjct: 63 IRLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREF 122
Query: 165 NEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSN--ETIMTVNHGSPVESTLFLPSG 222
+ + P ++I SG + ++++D R++ + G+P+ S + G
Sbjct: 123 RSVSP-VNTVVLHPNQTELI-SGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDG 180
Query: 223 GIFISAG--GTEIKVW------DIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDR 274
+ ++A GT VW + L + H+ + L+ N L +AS D+
Sbjct: 181 TMVVAANDRGT-CYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDK 239
Query: 275 HVKIYDVSTFKV 286
VKI+++ FK+
Sbjct: 240 TVKIWNLDGFKL 251
Score = 38.3 bits (85), Expect = 0.012
Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
Query: 180 SPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFL-PSGGIFISAGGTEIKVWDI 238
SP + + S+D T++L+ R+ + + + L L P G ++A I+++D+
Sbjct: 9 SPVYLATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVAACNPHIRLFDL 68
Query: 239 --FNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAI 296
+N + N H K V + + S S D VKI+D+ + + +
Sbjct: 69 RSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSPV 128
Query: 297 LSMAISEHDDILTVGMMDGIISI 319
++ + + L G +G I +
Sbjct: 129 NTVVLHPNQTELISGDQNGNIRV 151
Score = 29.9 bits (64), Expect = 4.4
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 56 YYFAATCSVRVQV-YDPVTKVVAKNISKFVEAAYGGCFRADG-RLLVAGIEEAAVKLFDV 113
Y + + C + ++P+ K+ A N S ++ C + G + L + VK++++
Sbjct: 193 YVWRSLCERQTMTEFEPLHKLQAHN-SHILK-----CLLSPGNKYLATASSDKTVKIWNL 246
Query: 114 QSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEH 167
+ +V TGH V F+ D +++ S D + LW + + + H
Sbjct: 247 DGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAH 300
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 51.2 bits (117), Expect = 2e-06
Identities = 59/298 (19%), Positives = 127/298 (42%), Gaps = 19/298 (6%)
Query: 109 KLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHT 168
K F ++ ++ GHTG V ++ L ++S S DK+V LW ++ + F+ H
Sbjct: 256 KAFHIEETPFQELY-GHTGDVLDLAWSDSNL-LLSASKDKTVRLWRTGCDQCLHVFH-HN 312
Query: 169 DYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISA 228
+Y+ +P++ + SGS D +++ + + + + + P+G F+
Sbjct: 313 NYVTCVEFNPVNKNNFASGSIDGKARIWGLSEERVVAWTDVRDSISAISYQPNGNGFVVG 372
Query: 229 GGT-EIKVWDIFNGGKLLSN--ISQHHKTVTTLRLASNNS-RLMSASLDRHVKIYDVSTF 284
T + + I + ++ + + +T + +S +++ +S D V+I+D +
Sbjct: 373 CITGNCRFYQILDNDVIMDEQILIRGRNRITAVEFCPGSSEKILVSSEDSKVRIFDKT-- 430
Query: 285 KVVHNIDFPN-----AILSMAISEHDDILTVGMMDGIISIRKREEPVRQSEKRKNLLKFI 339
+++H P+ + S S IL+V G+ P R+ K ++
Sbjct: 431 QMIHKFKAPSNFGRQSSASFVSSTGKHILSVRRGVGVYLWNNDAFPSRKGAKSSRSFEYF 490
Query: 340 PDHTSQTKADTVEVANEVKINK-KQKLPDCDVLIRKMQFSKALTVVLRPYISVKYPEK 396
H+ A E K++K + ++RK+Q S L+ R ++ +PE+
Sbjct: 491 --HSPGVSAVAAWTQPETKVSKVAGDDEESRRVMRKIQSSGRLSRSCR--VTATWPEE 544
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 50.8 bits (116), Expect = 2e-06
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 100 VAGIEEAAVKLFDVQSKNVLRVFTG-HTGPVHRTFFTKDQLKII-SYSDDKSVGLWDIST 157
+ GIEE V K + G HT V + K+ I+ S S DK V +WD++T
Sbjct: 238 LGGIEEMIVSKKKKSKKQKPKFKEGSHTESVLGLAWNKEFRNILASASADKKVKVWDVAT 297
Query: 158 EERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCR 199
HT ++A A + +P+++LSGS+D TV + D R
Sbjct: 298 GTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVMKDGR 339
Score = 35.5 bits (78), Expect = 0.088
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 180 SPDIILSGSYDHTVKLYDCRSNETIMTVNH---GSPVESTLFLPSGGIFISAGGT--EIK 234
+P+++ +GS D +VKL+D +NE H V S F ++ GG+ E+
Sbjct: 416 TPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGELH 475
Query: 235 VWD 237
VWD
Sbjct: 476 VWD 478
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 50.8 bits (116), Expect = 2e-06
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 115 SKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIAN-FNEHTDYIRA 173
+ ++LR+ TGH G + R ++ D KI+S SDD+S +W+I ++E + H+ +R
Sbjct: 225 ASHMLRL-TGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHS--VRV 281
Query: 174 GAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNH-GSPVESTLFLPSGGIFISAG-GT 231
IS +I++ D T +++ + + H G + L+ P+ + ++AG +
Sbjct: 282 WDCC-ISDSLIVTAGEDCTCRVWGVDGTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDS 340
Query: 232 EIKVWDIFNGG 242
IKV + N G
Sbjct: 341 AIKVHQLHNRG 351
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 50.8 bits (116), Expect = 2e-06
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 115 SKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIAN-FNEHTDYIRA 173
+ ++LR+ TGH G + R ++ D KI+S SDD+S +W+I ++E + H+ +R
Sbjct: 225 ASHMLRL-TGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHS--VRV 281
Query: 174 GAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNH-GSPVESTLFLPSGGIFISAG-GT 231
IS +I++ D T +++ + + H G + L+ P+ + ++AG +
Sbjct: 282 WDCC-ISDSLIVTAGEDCTCRVWGVDGTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDS 340
Query: 232 EIKVWDIFNGG 242
IKV + N G
Sbjct: 341 AIKVHQLHNRG 351
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 50.8 bits (116), Expect = 2e-06
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 13/190 (6%)
Query: 108 VKLFDVQSKNVLRVFT--GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFN 165
++LFDV S + V T HT V F D + S S+D +V +WD+ +
Sbjct: 58 IRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEY- 116
Query: 166 EHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETI--MTVNHGSPVESTLFLPSGG 223
E + P ++I SG + ++++D R+N + + V S + G
Sbjct: 117 ESVAAVNTVVLHPNQTELI-SGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGT 175
Query: 224 IFISAGGT-EIKVWDIFNGGKLLSNISQHHKT------VTTLRLASNNSRLMSASLDRHV 276
+ ++A VW + G + ++ HK + L+ N L +AS D+ V
Sbjct: 176 MVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTV 235
Query: 277 KIYDVSTFKV 286
KI++V FK+
Sbjct: 236 KIWNVDGFKL 245
Score = 37.5 bits (83), Expect = 0.022
Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 3/142 (2%)
Query: 181 PDIILS-GSYDHTVKLYDCRSNETIMTVNH-GSPVESTLFLPSGGIFISAGGTEIKVWDI 238
P +IL+ SYDHT++ ++ + T+ + S V P +A I+++D+
Sbjct: 4 PSVILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPHIRLFDV 63
Query: 239 -FNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAIL 297
N + + H V + + + S S D VKI+D+ + A+
Sbjct: 64 NSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAAVN 123
Query: 298 SMAISEHDDILTVGMMDGIISI 319
++ + + L G +G I +
Sbjct: 124 TVVLHPNQTELISGDQNGNIRV 145
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 97 RLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS 156
+ L + VK+++V + +V TGH V F+ D +++ S D + LW +
Sbjct: 224 KYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMP 283
Query: 157 TEERIANFNEH 167
+ + + H
Sbjct: 284 AGKEVKVYQGH 294
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 50.8 bits (116), Expect = 2e-06
Identities = 45/224 (20%), Positives = 100/224 (44%), Gaps = 8/224 (3%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F DG+LL + + V ++++++ V H + F + ++ + S DK++
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 575
Query: 152 LWDISTEER-IANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHG 210
+WD S + + H + + P +++ S ++ ++ +D N + + G
Sbjct: 576 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI--NASCVRAVKG 633
Query: 211 SPVESTLFLPSGGIFISAGG-TEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMS 269
+ + F P G F++A + ++DI N K ++ H V ++ + N + S
Sbjct: 634 ASTQ-VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 692
Query: 270 ASLDRHVKIYDVSTFKVVHNI-DFPNAILSMAI-SEHDDILTVG 311
S D VK++ +S+ +H + + N S+ + D+L +G
Sbjct: 693 VSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIG 735
Score = 48.4 bits (110), Expect = 1e-05
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 25 HDIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFV 84
+DI +W + + GA + F P + AA V ++D NI K
Sbjct: 616 NDIRFWD-INASCVRAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH 674
Query: 85 EA-AYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIIS 143
+ + C+ +G L VA + E AVKL+ + S + + + H F ++
Sbjct: 675 SSNVHSVCWSPNGEL-VASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLV 733
Query: 144 YSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLY 196
+++ LW+ + E + H I A A SP S ++ S S+D +VK++
Sbjct: 734 IGGYQAIELWN-TMENKCMTVAGHECVISALAQSP-STGVVASASHDKSVKIW 784
Score = 45.2 bits (102), Expect = 1e-04
Identities = 36/143 (25%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 140 KIISYSDDKSVGLWDISTEERIAN-FNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDC 198
+ ++ + + +V ++DI + N F H+ + + SP + +++ S S D VKL+
Sbjct: 646 QFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSP-NGELVASVSED-AVKLWSL 703
Query: 199 RSNETIMTV-NHGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTVT 256
S + I + N G+ S +F PS + GG + I++W+ K ++ ++ H ++
Sbjct: 704 SSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMEN-KCMT-VAGHECVIS 761
Query: 257 TLRLASNNSRLMSASLDRHVKIY 279
L + + + SAS D+ VKI+
Sbjct: 762 ALAQSPSTGVVASASHDKSVKIW 784
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 50.8 bits (116), Expect = 2e-06
Identities = 45/224 (20%), Positives = 100/224 (44%), Gaps = 8/224 (3%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F DG+LL + + V ++++++ V H + F + ++ + S DK++
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 152 LWDISTEER-IANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHG 210
+WD S + + H + + P +++ S ++ ++ +D N + + G
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI--NASCVRAVKG 635
Query: 211 SPVESTLFLPSGGIFISAGG-TEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMS 269
+ + F P G F++A + ++DI N K ++ H V ++ + N + S
Sbjct: 636 ASTQ-VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 270 ASLDRHVKIYDVSTFKVVHNI-DFPNAILSMAI-SEHDDILTVG 311
S D VK++ +S+ +H + + N S+ + D+L +G
Sbjct: 695 VSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIG 737
Score = 48.4 bits (110), Expect = 1e-05
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 25 HDIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFV 84
+DI +W + + GA + F P + AA V ++D NI K
Sbjct: 618 NDIRFWD-INASCVRAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH 676
Query: 85 EA-AYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIIS 143
+ + C+ +G L VA + E AVKL+ + S + + + H F ++
Sbjct: 677 SSNVHSVCWSPNGEL-VASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLV 735
Query: 144 YSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLY 196
+++ LW+ + E + H I A A SP S ++ S S+D +VK++
Sbjct: 736 IGGYQAIELWN-TMENKCMTVAGHECVISALAQSP-STGVVASASHDKSVKIW 786
Score = 45.2 bits (102), Expect = 1e-04
Identities = 36/143 (25%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 140 KIISYSDDKSVGLWDISTEERIAN-FNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDC 198
+ ++ + + +V ++DI + N F H+ + + SP + +++ S S D VKL+
Sbjct: 648 QFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSP-NGELVASVSED-AVKLWSL 705
Query: 199 RSNETIMTV-NHGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTVT 256
S + I + N G+ S +F PS + GG + I++W+ K ++ ++ H ++
Sbjct: 706 SSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMEN-KCMT-VAGHECVIS 763
Query: 257 TLRLASNNSRLMSASLDRHVKIY 279
L + + + SAS D+ VKI+
Sbjct: 764 ALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 50.8 bits (116), Expect = 2e-06
Identities = 45/224 (20%), Positives = 100/224 (44%), Gaps = 8/224 (3%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F DG+LL + + V ++++++ V H + F + ++ + S DK++
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 152 LWDISTEER-IANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHG 210
+WD S + + H + + P +++ S ++ ++ +D N + + G
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI--NASCVRAVKG 635
Query: 211 SPVESTLFLPSGGIFISAGG-TEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMS 269
+ + F P G F++A + ++DI N K ++ H V ++ + N + S
Sbjct: 636 ASTQ-VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 270 ASLDRHVKIYDVSTFKVVHNI-DFPNAILSMAI-SEHDDILTVG 311
S D VK++ +S+ +H + + N S+ + D+L +G
Sbjct: 695 VSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIG 737
Score = 48.4 bits (110), Expect = 1e-05
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 25 HDIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFV 84
+DI +W + + GA + F P + AA V ++D NI K
Sbjct: 618 NDIRFWD-INASCVRAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH 676
Query: 85 EA-AYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIIS 143
+ + C+ +G L VA + E AVKL+ + S + + + H F ++
Sbjct: 677 SSNVHSVCWSPNGEL-VASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLV 735
Query: 144 YSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLY 196
+++ LW+ + E + H I A A SP S ++ S S+D +VK++
Sbjct: 736 IGGYQAIELWN-TMENKCMTVAGHECVISALAQSP-STGVVASASHDKSVKIW 786
Score = 45.2 bits (102), Expect = 1e-04
Identities = 36/143 (25%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 140 KIISYSDDKSVGLWDISTEERIAN-FNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDC 198
+ ++ + + +V ++DI + N F H+ + + SP + +++ S S D VKL+
Sbjct: 648 QFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSP-NGELVASVSED-AVKLWSL 705
Query: 199 RSNETIMTV-NHGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTVT 256
S + I + N G+ S +F PS + GG + I++W+ K ++ ++ H ++
Sbjct: 706 SSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMEN-KCMT-VAGHECVIS 763
Query: 257 TLRLASNNSRLMSASLDRHVKIY 279
L + + + SAS D+ VKI+
Sbjct: 764 ALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 50.8 bits (116), Expect = 2e-06
Identities = 45/224 (20%), Positives = 100/224 (44%), Gaps = 8/224 (3%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F DG+LL + + V ++++++ V H + F + ++ + S DK++
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 152 LWDISTEER-IANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHG 210
+WD S + + H + + P +++ S ++ ++ +D N + + G
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI--NASCVRAVKG 635
Query: 211 SPVESTLFLPSGGIFISAGG-TEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMS 269
+ + F P G F++A + ++DI N K ++ H V ++ + N + S
Sbjct: 636 ASTQ-VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 270 ASLDRHVKIYDVSTFKVVHNI-DFPNAILSMAI-SEHDDILTVG 311
S D VK++ +S+ +H + + N S+ + D+L +G
Sbjct: 695 VSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIG 737
Score = 48.4 bits (110), Expect = 1e-05
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 25 HDIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFV 84
+DI +W + + GA + F P + AA V ++D NI K
Sbjct: 618 NDIRFWD-INASCVRAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH 676
Query: 85 EA-AYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIIS 143
+ + C+ +G L VA + E AVKL+ + S + + + H F ++
Sbjct: 677 SSNVHSVCWSPNGEL-VASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLV 735
Query: 144 YSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLY 196
+++ LW+ + E + H I A A SP S ++ S S+D +VK++
Sbjct: 736 IGGYQAIELWN-TMENKCMTVAGHECVISALAQSP-STGVVASASHDKSVKIW 786
Score = 45.2 bits (102), Expect = 1e-04
Identities = 36/143 (25%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 140 KIISYSDDKSVGLWDISTEERIAN-FNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDC 198
+ ++ + + +V ++DI + N F H+ + + SP + +++ S S D VKL+
Sbjct: 648 QFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSP-NGELVASVSED-AVKLWSL 705
Query: 199 RSNETIMTV-NHGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTVT 256
S + I + N G+ S +F PS + GG + I++W+ K ++ ++ H ++
Sbjct: 706 SSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMEN-KCMT-VAGHECVIS 763
Query: 257 TLRLASNNSRLMSASLDRHVKIY 279
L + + + SAS D+ VKI+
Sbjct: 764 ALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 50.8 bits (116), Expect = 2e-06
Identities = 45/224 (20%), Positives = 100/224 (44%), Gaps = 8/224 (3%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F DG+LL + + V ++++++ V H + F + ++ + S DK++
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 152 LWDISTEER-IANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHG 210
+WD S + + H + + P +++ S ++ ++ +D N + + G
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI--NASCVRAVKG 635
Query: 211 SPVESTLFLPSGGIFISAGG-TEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMS 269
+ + F P G F++A + ++DI N K ++ H V ++ + N + S
Sbjct: 636 ASTQ-VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 270 ASLDRHVKIYDVSTFKVVHNI-DFPNAILSMAI-SEHDDILTVG 311
S D VK++ +S+ +H + + N S+ + D+L +G
Sbjct: 695 VSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIG 737
Score = 48.4 bits (110), Expect = 1e-05
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 25 HDIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFV 84
+DI +W + + GA + F P + AA V ++D NI K
Sbjct: 618 NDIRFWD-INASCVRAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH 676
Query: 85 EA-AYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIIS 143
+ + C+ +G L VA + E AVKL+ + S + + + H F ++
Sbjct: 677 SSNVHSVCWSPNGEL-VASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLV 735
Query: 144 YSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLY 196
+++ LW+ + E + H I A A SP S ++ S S+D +VK++
Sbjct: 736 IGGYQAIELWN-TMENKCMTVAGHECVISALAQSP-STGVVASASHDKSVKIW 786
Score = 45.2 bits (102), Expect = 1e-04
Identities = 36/143 (25%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 140 KIISYSDDKSVGLWDISTEERIAN-FNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDC 198
+ ++ + + +V ++DI + N F H+ + + SP + +++ S S D VKL+
Sbjct: 648 QFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSP-NGELVASVSED-AVKLWSL 705
Query: 199 RSNETIMTV-NHGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTVT 256
S + I + N G+ S +F PS + GG + I++W+ K ++ ++ H ++
Sbjct: 706 SSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMEN-KCMT-VAGHECVIS 763
Query: 257 TLRLASNNSRLMSASLDRHVKIY 279
L + + + SAS D+ VKI+
Sbjct: 764 ALAQSPSTGVVASASHDKSVKIW 786
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 49.6 bits (113), Expect = 5e-06
Identities = 39/188 (20%), Positives = 81/188 (43%), Gaps = 3/188 (1%)
Query: 97 RLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS 156
R + +G VK++D+Q K ++ GHT + + + S S + + +++
Sbjct: 106 RYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLA 165
Query: 157 TEERIANFNE-HTDYIRAGAASPISPDIILSGSYDHTVKLYDC--RSNETIMTVNHGSPV 213
+ R + + +R S S ++++ D TV L+D RS + H +P
Sbjct: 166 SGARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPT 225
Query: 214 ESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLD 273
F PS I++ G + K++ +G + S+ + ++L N L++ + +
Sbjct: 226 AGVCFSPSNEKIIASVGMDKKLYTYDSGSRRSSSCIAYEAPFSSLAFGDNGYILVAGTSN 285
Query: 274 RHVKIYDV 281
V YD+
Sbjct: 286 GRVVFYDI 293
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 49.6 bits (113), Expect = 5e-06
Identities = 41/212 (19%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
+ +G LL + ++ ++ + L + GH+G V ++D ++I+ S D++
Sbjct: 45 YNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAK 104
Query: 152 LWDISTEERIANFN-----EHTDYIRAGAASPISPD-IILSGSYDHTVKLYDCRSNE--- 202
LWD+ + + + F D+ + I+ D + + S H ++ + ++
Sbjct: 105 LWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTSSAIHVKRIAEDPEDQVGD 164
Query: 203 ---TIMTVNHGSPVESTLFLPSGGIFISAG-GTEIKVWDIFNGGKLLSNISQ---HHKTV 255
+ + + + ++ P +S G I++WD GKLL + H + +
Sbjct: 165 SVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDA-ETGKLLKQSDEEVGHKEAI 223
Query: 256 TTLRLASNNSRLMSASLDRHVKIYDVSTFKVV 287
T+L A+++S ++ S D+ K++D+ T ++
Sbjct: 224 TSLCKAADDSHFLTGSHDKTAKLWDMRTLTLI 255
Score = 46.8 bits (106), Expect = 4e-05
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 67 QVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVF---T 123
QV D V + + + K + A G + +V+G E+AA++++D ++ +L+
Sbjct: 161 QVGDSVLVLQSPDGKKKINRAVWGPLN---QTIVSGGEDAAIRIWDAETGKLLKQSDEEV 217
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
GH + D ++ S DK+ LWD+ T I + + A A SP+ +
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTTVVP-VNAVAMSPLLNHV 276
Query: 184 ILSGSYDHT-------------VKLYDCRSNETIMTV-NHGSPVESTLFLPSGGIFISAG 229
+L G D + K YD E I V H P+ + F P G F S G
Sbjct: 277 VLGGGQDASAVTTTDHRAGKFEAKFYDTILQEEIGGVKGHFGPINALAFSPDGKSFSSGG 336
Score = 42.3 bits (95), Expect = 8e-04
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
GH P+ + ++ + S + D + +W ER+ + H+ + S S +
Sbjct: 35 GHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRL 94
Query: 184 ILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLF 218
I +GS D T KL+D +S + + T G+P S F
Sbjct: 95 I-TGSADQTAKLWDVKSGKELFTFKFGAPARSVDF 128
Score = 39.5 bits (88), Expect = 0.005
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 141 IISYSDDKSVGLWDISTEERIANFNEHTDYIRA--GAASPISPDIILSGSYDHTVKLYDC 198
I+S +D ++ +WD T + + +E + A L+GS+D T KL+D
Sbjct: 190 IVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDM 249
Query: 199 RSNETIMTVNHGSPVESTLFLPSGGIFISAGGTE 232
R+ I T PV + P + GG +
Sbjct: 250 RTLTLIKTYTTVVPVNAVAMSPLLNHVVLGGGQD 283
Score = 35.9 bits (79), Expect = 0.066
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Query: 204 IMTVNHGSPVESTLFLPSGGIFISAGGTEIK-VWDIFNGGKLLSNISQHHKTVTTLRLAS 262
I+ H P+ + +G + S VW NG +L H V ++
Sbjct: 31 ILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERL-GTYRGHSGAVWCCDISR 89
Query: 263 NNSRLMSASLDRHVKIYDVSTFKVVHNIDF--PNAILSMAISEHDDILT----VGMMDGI 316
++SRL++ S D+ K++DV + K + F P + ++ +H ++T VG I
Sbjct: 90 DSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTSSAI 149
Query: 317 ISIRKREEPVRQ 328
R E+P Q
Sbjct: 150 HVKRIAEDPEDQ 161
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 49.6 bits (113), Expect = 5e-06
Identities = 28/117 (23%), Positives = 54/117 (46%)
Query: 48 LDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAA 107
+DFS + + +++++ T V + + F DG L++ +
Sbjct: 269 IDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQT 328
Query: 108 VKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANF 164
++ ++S +L+ F GHT V+ FT D +II+ S D +V +WD T + + F
Sbjct: 329 ARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTF 385
Score = 42.3 bits (95), Expect = 8e-04
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 182 DIILSGSYDHTVKLYDCRSNETIMTVN-HGSPVESTLFLPSGGIFISAGGTEIKVWDIFN 240
+++ SGS D +K++ R+ I + H V S F G +S +
Sbjct: 276 EMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLK 335
Query: 241 GGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVST 283
GKLL H V S+ SR+++AS D VK++D T
Sbjct: 336 SGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKT 378
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 49.2 bits (112), Expect = 7e-06
Identities = 49/229 (21%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 66 VQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKN-VLRVFTG 124
VQ++D V+ + + E+ G + +L G + + DV+ ++ ++ + G
Sbjct: 158 VQLWDCVSNRQVRTLRGGHESRVGS-LAWNNHILTTGGMDGKIVNNDVRIRSSIVETYLG 216
Query: 125 HTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS-------TEERIANFNEHTDYIRAGAAS 177
HT V +++ K+ S +D V +WD T + + F EHT +RA A
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWC 276
Query: 178 PISPDIILSGS--YDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGG---TE 232
P ++ +G D +K ++ + + +V GS V S L+ S +S+ G +
Sbjct: 277 PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSKSERELLSSHGFTQNQ 336
Query: 233 IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDV 281
+ +W + K ++ ++ H V + + + + SA+ D +++++V
Sbjct: 337 LTLWKYPSMVK-MAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 384
Score = 32.3 bits (70), Expect = 0.82
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Query: 108 VKLFDVQSKNVLRVFT--GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFN 165
V L+D S + ++ T GPV +T+D L + D+ V LWD + ++
Sbjct: 114 VYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLR 173
Query: 166 EHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVE-STLFLPSGGI 224
+ R G+ + + I+ +G D + D R +I+ G E L G
Sbjct: 174 GGHE-SRVGSLA-WNNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGK 231
Query: 225 FISAGGTE--IKVWD 237
+++GG + + +WD
Sbjct: 232 KLASGGNDNVVHIWD 246
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 49.2 bits (112), Expect = 7e-06
Identities = 29/109 (26%), Positives = 48/109 (44%)
Query: 134 FTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTV 193
F+ D + S D +V + D T + + H P +I+ SGS DH V
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEV 170
Query: 194 KLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGG 242
+L++ ++ E I T + P+ S F G + A G ++ +W GG
Sbjct: 171 RLWNAKTGECIRTHDFYRPIASIAFHAGGELLAVASGHKLHIWHYNKGG 219
Score = 36.3 bits (80), Expect = 0.050
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGH-TGPVHRTFFTKDQLKIISYSDDKSV 150
F +DGR L + + VK+ D ++ L++ TGH P F + + S S D V
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEV 170
Query: 151 GLWDISTEERI 161
LW+ T E I
Sbjct: 171 RLWNAKTGECI 181
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 49.2 bits (112), Expect = 7e-06
Identities = 29/109 (26%), Positives = 48/109 (44%)
Query: 134 FTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTV 193
F+ D + S D +V + D T + + H P +I+ SGS DH V
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEV 170
Query: 194 KLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGG 242
+L++ ++ E I T + P+ S F G + A G ++ +W GG
Sbjct: 171 RLWNAKTGECIRTHDFYRPIASIAFHAGGELLAVASGHKLHIWHYNKGG 219
Score = 36.3 bits (80), Expect = 0.050
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGH-TGPVHRTFFTKDQLKIISYSDDKSV 150
F +DGR L + + VK+ D ++ L++ TGH P F + + S S D V
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEV 170
Query: 151 GLWDISTEERI 161
LW+ T E I
Sbjct: 171 RLWNAKTGECI 181
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 48.8 bits (111), Expect = 9e-06
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Query: 60 ATCSVRVQVYDPVTKVV-AKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNV 118
A C V + V K+ K + A Y GR ++ G ++ VK++ + +
Sbjct: 220 AACYVIAKPSSMVQKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYC 279
Query: 119 LRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASP 178
L GH G + + + + I S S+D + +W + ++ HT + A A SP
Sbjct: 280 LASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSP 339
Query: 179 I--SPDIILSGSYDHTVKLYDCR 199
SP +LS S D T +++D R
Sbjct: 340 RPGSPYQLLSSSDDGTCRIWDAR 362
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 219 LPSGGIFISAGGTE--IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHV 276
L G ++ G + +KVW + + L++ H +T L ++SNN + SAS D +
Sbjct: 253 LDRSGRYVITGSDDRLVKVWSM-DTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVI 311
Query: 277 KIY 279
+++
Sbjct: 312 RVW 314
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 48.0 bits (109), Expect = 2e-05
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 10/197 (5%)
Query: 96 GRLLVAGIEEAAVKLFDVQSKNVLR--VFTGHTGPVHRTFFT---KDQLKIISYSDDKSV 150
G + G E++++++D+ N + V G F T +++ + S S+DK V
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRNIVASGSEDKKV 239
Query: 151 GLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRS-NETIMTVNH 209
+WD++T + H + A A + +P+++LSGS D TV L D R + + + +
Sbjct: 240 KVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPSNSGLKWST 299
Query: 210 GSPVESTLFLPSG--GIFISAGGTEIKVWDIFNGGKLLS-NISQHHKTVTTLRLASNNSR 266
+ VE + P +S +K +D S I H V+++ +
Sbjct: 300 EAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSEVSSISYNIHAPN 359
Query: 267 LM-SASLDRHVKIYDVS 282
L+ + S D VK++D+S
Sbjct: 360 LLATGSADESVKLWDLS 376
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 48.0 bits (109), Expect = 2e-05
Identities = 40/194 (20%), Positives = 80/194 (41%), Gaps = 6/194 (3%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVG 151
F +DG++L + + L+ + HT + F+ QL++ + S DK+V
Sbjct: 659 FSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVR 718
Query: 152 LWDISTE-ERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHG 210
+WD + + F H+ + + PI D+I S D+ ++ + + G
Sbjct: 719 VWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYKGG 778
Query: 211 SPVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMS 269
S F P G +++A + V D+ + ++ H + ++ + L S
Sbjct: 779 S--TQIRFQPRVGKYLAASSANLVNVLDV-ETQAIRHSLQGHANPINSVCWDPSGDFLAS 835
Query: 270 ASLDRHVKIYDVST 283
S D VK++ + T
Sbjct: 836 VSEDM-VKVWTLGT 848
Score = 41.1 bits (92), Expect = 0.002
Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 15/225 (6%)
Query: 105 EAAVKLFDVQSKNV-LRVFTGHTGPVHRTFF--TKDQLKIISYSDDKSVGLWDISTEERI 161
+ V+++D +K LR F GH+ V F KD L I S +D + W I+
Sbjct: 714 DKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDL-ICSCDNDNEIRYWSINNGSCT 772
Query: 162 ANFNEHTDYIRAGAASPISPDI--ILSGSYDHTVKLYDCRSNETIMTVN-HGSPVESTLF 218
+ + IR P + L+ S + V + D + ++ H +P+ S +
Sbjct: 773 RVYKGGSTQIR------FQPRVGKYLAASSANLVNVLDVETQAIRHSLQGHANPINSVCW 826
Query: 219 LPSGGIFISAGGTEIKVWDIFNG--GKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHV 276
PSG S +KVW + G G+ + +S + + L+ + +
Sbjct: 827 DPSGDFLASVSEDMVKVWTLGTGSEGECVHELSCNGNKFQSCVFHPAYPSLLVIGCYQSL 886
Query: 277 KIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISIRK 321
+++++S K + I S+A+S ++ D ++ + K
Sbjct: 887 ELWNMSENKTMTLPAHEGLITSLAVSTATGLVASASHDKLVKLWK 931
Score = 29.9 bits (64), Expect = 4.4
Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 6/157 (3%)
Query: 43 GAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAG 102
G + F P Y AA+ + V V D T+ + ++ C+ G L A
Sbjct: 777 GGSTQIRFQPRVGKYLAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFL-AS 835
Query: 103 IEEAAVKLFDV---QSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEE 159
+ E VK++ + + + + F ++ +S+ LW++S E
Sbjct: 836 VSEDMVKVWTLGTGSEGECVHELSCNGNKFQSCVFHPAYPSLLVIGCYQSLELWNMS-EN 894
Query: 160 RIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLY 196
+ H I + A S + ++ S S+D VKL+
Sbjct: 895 KTMTLPAHEGLITSLAVS-TATGLVASASHDKLVKLW 930
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 46.8 bits (106), Expect = 4e-05
Identities = 35/198 (17%), Positives = 90/198 (45%), Gaps = 7/198 (3%)
Query: 90 GCFRADGRLLVAGIEEAAVKLFDVQ-SKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDK 148
G + R+L +G + + D++ + + GH V ++ D ++ S +D
Sbjct: 261 GVLAWNSRILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDN 320
Query: 149 SVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILS--GSYDHTVKLYDCRSNETIMT 206
+ +W+ +++ I EHT ++A SP ++ S G+ D ++ ++ + + +
Sbjct: 321 QLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNS 380
Query: 207 VNHGSPVESTLFLPSGGIFISAGG---TEIKVWDIFNGGKLLSNISQHHKTVTTLRLASN 263
++ GS V + + + +S G +I +W + K ++ ++ H V L + +
Sbjct: 381 IDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSK-VATLTGHSMRVLYLATSPD 439
Query: 264 NSRLMSASLDRHVKIYDV 281
+++ + D ++ ++V
Sbjct: 440 GQTIVTGAGDETLRFWNV 457
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 46.4 bits (105), Expect = 5e-05
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 99 LVAGIEEAAVKLFDV------QSKNVLRVFTGHTGPVHRT-FFTKDQLKIISYSDDKSVG 151
L++G ++A + L+D+ +S + ++F H G V + + + S DD+ +
Sbjct: 194 LLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
Query: 152 LWDI---STEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV- 207
+WD+ S + + + H+ + A +P + ++ +GS D TVKL+D R T +
Sbjct: 254 IWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTF 313
Query: 208 -NHGSPVESTLFLPSGGIFISAG--GTEIKVWDI 238
+H V + P +++ G + VWD+
Sbjct: 314 DSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 46.4 bits (105), Expect = 5e-05
Identities = 40/179 (22%), Positives = 81/179 (45%), Gaps = 11/179 (6%)
Query: 109 KLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHT 168
K+F + S+ F GHTG + +++ ++S S D++V LW + + + H
Sbjct: 347 KVFSI-SETPQHEFRGHTGEILDLSWSEKGF-LLSSSVDETVRLWRVGSSDECIRVFSHK 404
Query: 169 DYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSG-GIFIS 227
++ A +P+ + +SGS D V+++D + + V + + P G G +
Sbjct: 405 SFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQFRVVDYTDIRQIVTALCYRPDGKGAVVG 464
Query: 228 AGGTEIKVWDIF-NGGKLLSNISQH------HKTVTTLRLASNNS-RLMSASLDRHVKI 278
+ E + + N +L +IS H +K +T + +S ++M S D ++I
Sbjct: 465 SMTGECRFYHTTDNQLQLDRDISLHGKKKVPNKRITGFQFFPGDSDKVMVTSADSQIRI 523
Score = 37.1 bits (82), Expect = 0.029
Identities = 51/264 (19%), Positives = 100/264 (37%), Gaps = 24/264 (9%)
Query: 75 VVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFF 134
V+ + K E G R+ R + ++ + ++ S V + F+ H G + F
Sbjct: 206 VLTHVLDKTEECTDGESTRSSIRRQLTRVQSFKKQFKELSSLCVGQEFSAHDGSIVVMKF 265
Query: 135 TKDQLKIISYSDDKSVGLWDISTEER------IANFNEHTDYIRAGAASPISPDIILSGS 188
+ D + S +D V +W+I +ER +A + Y S I P +
Sbjct: 266 SHDGKYLASAGEDCVVRVWNIIEDERRDNEFEVAESDSSCVYFGMNDKSQIEPLKTENEK 325
Query: 189 YDHTVKLYDCRSNETIMTV----------------NHGSPVESTLFLPSGGIFISAGGTE 232
+ + L +S T + H + + G + S+
Sbjct: 326 IEKSRGLLRKKSESTCAVLPSKVFSISETPQHEFRGHTGEILDLSWSEKGFLLSSSVDET 385
Query: 233 IKVWDIFNGGKLLSNISQHHKTVTTLRLAS-NNSRLMSASLDRHVKIYDVSTFKVVHNID 291
+++W + + + + + H VT + +++ +S S+D V+I+DVS F+VV D
Sbjct: 386 VRLWRVGSSDECI-RVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQFRVVDYTD 444
Query: 292 FPNAILSMAISEHDDILTVGMMDG 315
+ ++ VG M G
Sbjct: 445 IRQIVTALCYRPDGKGAVVGSMTG 468
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 46.4 bits (105), Expect = 5e-05
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 11/145 (7%)
Query: 140 KIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCR 199
+I S + D V +WD++ + + EH + + S P ++ SGS D T
Sbjct: 598 QIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGT------- 650
Query: 200 SNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKV--WDIFNGGKLLSNISQHHKTVTT 257
+I T+ + V F G ++ G + KV +D+ N L + H KTV+
Sbjct: 651 -GVSIGTIKTKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSY 709
Query: 258 LRLASNNSRLMSASLDRHVKIYDVS 282
++ ++S L+S+S D +K++D+S
Sbjct: 710 VKFV-DSSTLVSSSTDNTLKLWDLS 733
Score = 35.5 bits (78), Expect = 0.088
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 96 GRLLVAGIEEAAVKLFDVQSKNV-LRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
GR L G + V +D+++ + L GH+ V F D ++S S D ++ LWD
Sbjct: 673 GRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFV-DSSTLVSSSTDNTLKLWD 731
Query: 155 IS------TEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLY 196
+S E + +F HT+ ++ +S I +GS + V +Y
Sbjct: 732 LSMSASGINESPLHSFTGHTN-LKNFVGLSVSDGYIATGSETNEVFVY 778
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 46.4 bits (105), Expect = 5e-05
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
Query: 134 FTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTV 193
+ K+ L Y D V +WD T + + + EH + SP P +SGS D +V
Sbjct: 776 YIKNYLASTDY--DGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSV 833
Query: 194 KLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKV--WDIFNGGKLLSNISQH 251
KL+ ++ T+ + V F ++ G + KV +D+ ++ H
Sbjct: 834 KLWSINEKRSLGTIWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGH 893
Query: 252 HKTVTTLRLASNNSRLMSASLDRHVKIYDVS 282
K V+ ++ + + ++SAS D +K+++++
Sbjct: 894 EKAVSYVKFMDSET-IVSASTDNSLKLWNLN 923
Score = 41.5 bits (93), Expect = 0.001
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 4/137 (2%)
Query: 105 EAAVKLFDVQSKNVLRVFTGHTGPVHRTFFT-KDQLKIISYSDDKSVGLWDISTEERIAN 163
+ V+++D + +T H F+ D K +S SDD SV LW I+ + +
Sbjct: 787 DGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGT 846
Query: 164 FNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNET--IMTVNHGSPVESTLFLPS 221
+ + S S ++ GS D+ V YD R +T H V F+ S
Sbjct: 847 IWSPAN-VCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDS 905
Query: 222 GGIFISAGGTEIKVWDI 238
I ++ +K+W++
Sbjct: 906 ETIVSASTDNSLKLWNL 922
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 46.0 bits (104), Expect = 6e-05
Identities = 48/229 (20%), Positives = 103/229 (44%), Gaps = 15/229 (6%)
Query: 66 VQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKN-VLRVFTG 124
VQ++D V+ + + E+ G + +L G + + DV+ ++ ++ + G
Sbjct: 189 VQLWDFVSNRQVRTLIGGHESRVGS-LAWNNHILTTGGMDGKIVNNDVRIRSSIVGTYLG 247
Query: 125 HTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS-------TEERIANFNEHTDYIRAGAAS 177
HT V +++ K+ S + V +WD T + + F EHT +RA A
Sbjct: 248 HTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWC 307
Query: 178 PISPDIILSGS--YDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGG---TE 232
P ++ +G D +K ++ + + +V GS V S L+ +S+ G +
Sbjct: 308 PFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQRERELLSSHGFTQNQ 367
Query: 233 IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDV 281
+ +W + K ++ ++ H V + + N + SA+ D ++++++V
Sbjct: 368 LTLWKYPSMSK-MAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 415
Score = 29.1 bits (62), Expect = 7.6
Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 9/136 (6%)
Query: 108 VKLFDVQSKNVLRVFT--GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIAN-F 164
V L+D S + + T GPV +T+D L + D+ V LWD + ++
Sbjct: 145 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLI 204
Query: 165 NEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIM--TVNHGSPVESTLFLPSG 222
H R G+ + + I+ +G D + D R +I+ + H V + SG
Sbjct: 205 GGHES--RVGSLA-WNNHILTTGGMDGKIVNNDVRIRSSIVGTYLGHTEEVCGLKWSESG 261
Query: 223 GIFISAGG-TEIKVWD 237
S G + +WD
Sbjct: 262 KKLASGGNYNVVHIWD 277
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 46.0 bits (104), Expect = 6e-05
Identities = 52/245 (21%), Positives = 107/245 (43%), Gaps = 9/245 (3%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFT-GHTGPVHRTFFTKDQLKIISYSDDKSVGLW 153
D ++L G EE ++ +DV S + + ++ G P+ ++ Q II+ D+S+ +W
Sbjct: 331 DRQVLTCGAEEV-IRRWDVDSGDCVHMYEKGGISPISCGWYPDGQ-GIIAGMTDRSICMW 388
Query: 154 DISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPV 213
D+ E+ + T + + A ++S D + L+D + +
Sbjct: 389 DLDGREKECWKGQRTQKV-SDIAMTDDGKWLVSVCKDSVISLFDREATVERLIEEEDMIT 447
Query: 214 ESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSR---LMSA 270
+L + I ++ EI++W+I K++S H ++ +R + + S
Sbjct: 448 SFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASG 507
Query: 271 SLDRHVKIYDVSTFKVVHNI-DFPNAILSMAISEHD-DILTVGMMDGIISIRKREEPVRQ 328
S D V I+ ST K++ + A+ ++ S + +L DG I I + +Q
Sbjct: 508 SEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDRINQQ 567
Query: 329 SEKRK 333
++K+K
Sbjct: 568 NQKKK 572
Score = 40.7 bits (91), Expect = 0.002
Identities = 39/199 (19%), Positives = 85/199 (42%), Gaps = 6/199 (3%)
Query: 120 RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPI 179
++ HT V F+ + + S S D++ +W+IS + I+ + + + A
Sbjct: 268 QILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILW 327
Query: 180 SPD--IILSGSYDHTVKLYDCRSNETIMTVNHG--SPVESTLFLPSGGIFISAGGTEIKV 235
SPD +L+ + ++ +D S + + G SP+ + GI I +
Sbjct: 328 SPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICM 387
Query: 236 WDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNA 295
WD+ +G + Q + V+ + + + L+S D + ++D V I+ +
Sbjct: 388 WDL-DGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREA-TVERLIEEEDM 445
Query: 296 ILSMAISEHDDILTVGMMD 314
I S ++S + + V +++
Sbjct: 446 ITSFSLSNDNKYILVNLLN 464
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 46.0 bits (104), Expect = 6e-05
Identities = 40/175 (22%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 115 SKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAG 174
S+ L F GH G + +++ ++S S D++V LW + +E + F H +++
Sbjct: 311 SEKPLHEFKGHIGEILDLSWSEKGY-LLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCV 368
Query: 175 AASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSG-GIFISAGGTEI 233
A +P+ + +SGS D V+++D + + V + + P G I +
Sbjct: 369 AFNPVDDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNC 428
Query: 234 KVWDIF-NGGKLLSNISQH-HKTVTTLRLA--------SNNSRLMSASLDRHVKI 278
+ + IF N ++ I+ H K V + R++ S++ ++M S D ++I
Sbjct: 429 RFYHIFENQLQMDQEINVHGKKKVASKRISGLQYLPSDSDSDKVMVTSADSQIRI 483
Score = 41.5 bits (93), Expect = 0.001
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 19/200 (9%)
Query: 96 GRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 155
G LL + ++E V+L+ V LR FT + F D IS S D V +WD+
Sbjct: 334 GYLLSSSVDET-VRLWRVGCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV 392
Query: 156 STEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIM--TVN-HGSP 212
T R+ ++ + D + A P + ++ GS + Y N+ M +N HG
Sbjct: 393 -TRCRVVDYTDIRDIVTAVCYRPDAKGAVI-GSMTGNCRFYHIFENQLQMDQEINVHGKK 450
Query: 213 ------VESTLFLPSGG----IFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLAS 262
+ +LPS + +++ ++I+ I G ++ + T+ S
Sbjct: 451 KVASKRISGLQYLPSDSDSDKVMVTSADSQIR---IICGEDVICKLKASSLRTTSASFIS 507
Query: 263 NNSRLMSASLDRHVKIYDVS 282
+ ++S S D ++ ++ S
Sbjct: 508 DGKHIISTSEDSYINVWSYS 527
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 100 VAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEE 159
VA ++ + ++ S + + F+ H G + F+ D I S +D V +W I+ EE
Sbjct: 192 VARVQTHKKQFKELSSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEE 251
Query: 160 R 160
R
Sbjct: 252 R 252
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 46.0 bits (104), Expect = 6e-05
Identities = 40/175 (22%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 115 SKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAG 174
S+ L F GH G + +++ ++S S D++V LW + +E + F H +++
Sbjct: 311 SEKPLHEFKGHIGEILDLSWSEKGY-LLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCV 368
Query: 175 AASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSG-GIFISAGGTEI 233
A +P+ + +SGS D V+++D + + V + + P G I +
Sbjct: 369 AFNPVDDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNC 428
Query: 234 KVWDIF-NGGKLLSNISQH-HKTVTTLRLA--------SNNSRLMSASLDRHVKI 278
+ + IF N ++ I+ H K V + R++ S++ ++M S D ++I
Sbjct: 429 RFYHIFENQLQMDQEINVHGKKKVASKRISGLQYLPSDSDSDKVMVTSADSQIRI 483
Score = 41.5 bits (93), Expect = 0.001
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 19/200 (9%)
Query: 96 GRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 155
G LL + ++E V+L+ V LR FT + F D IS S D V +WD+
Sbjct: 334 GYLLSSSVDET-VRLWRVGCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV 392
Query: 156 STEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIM--TVN-HGSP 212
T R+ ++ + D + A P + ++ GS + Y N+ M +N HG
Sbjct: 393 -TRCRVVDYTDIRDIVTAVCYRPDAKGAVI-GSMTGNCRFYHIFENQLQMDQEINVHGKK 450
Query: 213 ------VESTLFLPSGG----IFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLAS 262
+ +LPS + +++ ++I+ I G ++ + T+ S
Sbjct: 451 KVASKRISGLQYLPSDSDSDKVMVTSADSQIR---IICGEDVICKLKASSLRTTSASFIS 507
Query: 263 NNSRLMSASLDRHVKIYDVS 282
+ ++S S D ++ ++ S
Sbjct: 508 DGKHIISTSEDSYINVWSYS 527
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 100 VAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEE 159
VA ++ + ++ S + + F+ H G + F+ D I S +D V +W I+ EE
Sbjct: 192 VARVQTHKKQFKELSSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEE 251
Query: 160 R 160
R
Sbjct: 252 R 252
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 45.2 bits (102), Expect = 1e-04
Identities = 52/232 (22%), Positives = 96/232 (41%), Gaps = 34/232 (14%)
Query: 79 NISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQ 138
NI++F F G LL A ++ +KL + +++RV GH GPV F +
Sbjct: 99 NITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNG 158
Query: 139 LKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDC 198
+ S +V W++ + + +F ++PD +G
Sbjct: 159 ELLASIDTTGTVLCWEL--QNGVVSF----------TLKGVAPD---TG----------- 192
Query: 199 RSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTL 258
N +I+ + SP TL +P G+ ++ ++D F G KL + H + + L
Sbjct: 193 -FNTSIVNIPRWSPDGRTLAVP--GL-----RNDVVMYDRFTGEKLFALRGDHLEAICYL 244
Query: 259 RLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTV 310
A N + ++ LD+ V ++DV + + F I M+ + + L+V
Sbjct: 245 TWAPNGKYIATSGLDKQVLLWDVDKKQDIDRHKFEERICCMSWKPNGNALSV 296
Score = 43.2 bits (97), Expect = 4e-04
Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Query: 141 IISYSDDKSVGLWD-ISTEERIANF-NEHTDYIRAGAASPISPDIILSGSYDHTVKLYDC 198
+ S S D S+ + D +ST H D + + A S S ++ SGS DH VKLY
Sbjct: 33 VTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLALSNDST-LLASGSIDHCVKLYKF 91
Query: 199 RSNETIMTVNHGS-PVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTVT 256
S E + + P+ F SG + +AG E IK+ + F+ G ++ + H VT
Sbjct: 92 PSGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTFD-GSIVRVLKGHKGPVT 150
Query: 257 TLRLASNNSRLMS 269
L N L S
Sbjct: 151 GLDFHPNGELLAS 163
Score = 33.1 bits (72), Expect = 0.47
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 227 SAGGTEIKVWDIFNGGKLLSNISQHHKT-VTTLRLASNNSRLMSASLDRHVKIYDVSTFK 285
S+ I V D + L I +HH+ VT+L L+++++ L S S+D VK+Y + +
Sbjct: 36 SSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGE 95
Query: 286 VVHNI 290
NI
Sbjct: 96 FQTNI 100
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 45.2 bits (102), Expect = 1e-04
Identities = 41/203 (20%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLR-VFTGHTGPVHRTFFTKDQLKIISYSDDKSV 150
+ +G + +G V+++ + +VL+ F G + ++ D ++I++ D K
Sbjct: 64 YSPNGEWIASGDVSGTVRIWGAYNDHVLKNEFKVLAGRIDDLQWSADGMRIVASGDGKGK 123
Query: 151 GL-----WDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNE-TI 204
L WD + + F+ H+ + + A P P I++ D V Y+ + +
Sbjct: 124 SLVRAFMWDSGSN--VGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEGPPFKFKL 181
Query: 205 MTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGG--KLLSNISQ---HHKTVTTLR 259
+ H + V F P G FI+ + + I++G ++L +S H ++ +
Sbjct: 182 SSREHSNFVNCVRFAPDGSKFITVSSDKKGI--IYDGKTCEILGELSSDDGHKGSIYAVS 239
Query: 260 LASNNSRLMSASLDRHVKIYDVS 282
+ + ++++ S D+ KI+D+S
Sbjct: 240 WSPDGKQVLTVSADKSAKIWDIS 262
Score = 37.5 bits (83), Expect = 0.022
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 171 IRAGAASPISPDIILSGSYDHTVKLYDCRSN---ETIMTVNHGSPVESTLFLPSGGIFIS 227
+ A A +P + ++ G D + LY + E + H + + P +F S
Sbjct: 450 VTALAVTPDGTEAVIGGQ-DGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLSMFAS 508
Query: 228 AG-GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDV 281
A E VWD + L N+ H + L + N++ + + SLD V +Y+V
Sbjct: 509 ADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEV 563
Score = 33.5 bits (73), Expect = 0.35
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 74 KVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFT---GHTGPVH 130
K+ ++ S FV F DG + + ++D ++ +L + GH G ++
Sbjct: 180 KLSSREHSNFVNCVR---FAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIY 236
Query: 131 RTFFTKDQLKIISYSDDKSVGLWDIS 156
++ D ++++ S DKS +WDIS
Sbjct: 237 AVSWSPDGKQVLTVSADKSAKIWDIS 262
Score = 29.1 bits (62), Expect = 7.6
Identities = 25/126 (19%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 37 VLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGC--FRA 94
VL + GAI + +SP + +A + V+D V++ + K + +A C +
Sbjct: 486 VLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREM-KLKNMLYHSARINCLAWSP 544
Query: 95 DGRLLVAGIEEAAVKLFDVQ--SKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGL 152
+ ++ G + V +++V + + + + H G V+ F D ++S +D + +
Sbjct: 545 NSTMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFADDS-HVVSSGEDACIRV 603
Query: 153 WDISTE 158
W + +
Sbjct: 604 WSFTPQ 609
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 44.8 bits (101), Expect = 1e-04
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 5/134 (3%)
Query: 98 LLVAGIEEAAVKLFDVQS--KNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 155
L AG++ AV +++V S K +R F H PV ++K L ++S D + L+D+
Sbjct: 176 LASAGLD-GAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDV 234
Query: 156 STEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMT-VNHGSPVE 214
+F E + + P + ++ LSG +++L+D R+N+ + V P+
Sbjct: 235 ERGVETQSFKE-DEVVGVVKFHPDNCNVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPIL 293
Query: 215 STLFLPSGGIFISA 228
F+ G FIS+
Sbjct: 294 DVEFIAGGKQFISS 307
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 98 LLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSD-------DKSV 150
+ ++G + +++L+D+++ + + GP+ F + IS SD + +V
Sbjct: 261 VFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAV 320
Query: 151 GLWDISTEERIAN 163
+WDIS E ++N
Sbjct: 321 IVWDISREVPLSN 333
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 44.4 bits (100), Expect = 2e-04
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTE 158
+++ + ++L DV+ V++ + D+ + D +WD+
Sbjct: 279 VISSSYDGLIRLMDVEKSVFDLVYSTDEAIFSLSQRPNDEQSLYFGQDYGVFNVWDLRAG 338
Query: 159 ERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSN-----ETIMTVNHGSPV 213
+ + ++ H I + +P +P ++ + S D T L+D RS +T+ TVNH V
Sbjct: 339 KSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLSTVNHSRAV 398
Query: 214 ESTLFLPSG 222
S F PSG
Sbjct: 399 HSAYFSPSG 407
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 44.0 bits (99), Expect = 3e-04
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 98 LLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKII-SYSDD--------- 147
+++AG ++KL+D+Q + + H+ TF DQL + + S D
Sbjct: 502 MVIAGSANGSLKLYDIQKASSTVTTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLASGYS 561
Query: 148 KSVGLWDISTEERIANF-NEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCR 199
K V L+DI R+ F N H ++I S SP + + S+D VKL+D R
Sbjct: 562 KDVALYDIGRGTRLQVFANMHQEHINVVKFSNHSPFLFATSSFDKDVKLWDLR 614
Score = 37.9 bits (84), Expect = 0.016
Identities = 25/116 (21%), Positives = 64/116 (55%), Gaps = 13/116 (11%)
Query: 179 ISPDIILSGSYDHTVKLYDC-RSNETIMTVNHGS----------PVESTLFLPSGGIFIS 227
I P ++++GS + ++KLYD +++ T+ T +H + + S + +F++
Sbjct: 498 IYPSMVIAGSANGSLKLYDIQKASSTVTTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLA 557
Query: 228 AG-GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLM-SASLDRHVKIYDV 281
+G ++ ++DI G +L + H + + ++ ++++ L ++S D+ VK++D+
Sbjct: 558 SGYSKDVALYDIGRGTRLQVFANMHQEHINVVKFSNHSPFLFATSSFDKDVKLWDL 613
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 43.6 bits (98), Expect = 3e-04
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Query: 120 RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS----TEERIANFNEHTDYIRAGA 175
R + GH VH + + K+ S S D++ +W+I ++ + HTD +
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLC 73
Query: 176 ASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSG-GIFISAGGTEIK 234
P D++ + S D +V+L+D RS + V + + P G + + E+
Sbjct: 74 WDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGTHVAVGNRDDELT 133
Query: 235 VWDI 238
+ D+
Sbjct: 134 ILDV 137
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 96 GRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 155
GR G ++ V L+D+ LR FT PV F I S S+D + + ++
Sbjct: 203 GRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASEDLFIDIANV 262
Query: 156 ST 157
T
Sbjct: 263 QT 264
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 43.6 bits (98), Expect = 3e-04
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 140 KIISYSDDKSVGLWDISTEERIANFNEHTDYI---RAGAASP----ISPDIILSGSYDHT 192
++ + S+D V LW+ +T E +A + + D I R G + I D + + DH
Sbjct: 50 RLYTGSNDGVVRLWNANTLETLAEASSNGDVITGERGGGGAVKSLVILADKLFTAHQDHK 109
Query: 193 VKLYDCRSNETIMTVNHGSPVESTLFLPS-GGIFISAGGTEIKVWDIFNGGKLLSNISQH 251
++++ + N+ + G +P+ F + +V +I K ++ H
Sbjct: 110 IRVW--KINDVVEEDVGGKKYMHLATMPTISDRFAKCLMPKNQV-EIRRHKK--ASWVHH 164
Query: 252 HKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNID--FPNAILSMAISEHDDILT 309
V+ L L+ + + L S S DR +KI+ + FK + + +AI ++A+SE+ DI T
Sbjct: 165 VDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIYT 224
Query: 310 VGMMDGIISI-RKREEPVRQSEKRK-NLLKFIPDHTSQTKA 348
G D I + RK +KRK +L+ + +H S A
Sbjct: 225 -GSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINA 264
Score = 42.3 bits (95), Expect = 8e-04
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 16/172 (9%)
Query: 125 HTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANF-NEHTDYIRAGAASPISPDI 183
H V ++D + S S D+++ +W + + + +F N H D I A A S
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD-- 221
Query: 184 ILSGSYDHTVKLYDCRSNE---------TIMTV--NHGSPVESTLFLPSGGIFISAGGTE 232
I +GS D +K++ NE +++ + H S + + + G + +GG++
Sbjct: 222 IYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSD 281
Query: 233 --IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVS 282
I VW+ +GG ++ T + L LA + L S S D+ V+++ S
Sbjct: 282 GSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDILCSGSADKTVRLWKCS 333
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 43.6 bits (98), Expect = 3e-04
Identities = 33/124 (26%), Positives = 66/124 (53%), Gaps = 15/124 (12%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLR-VFTGHTGPVHRTFF---TKDQLKIISYSDD 147
+ ++G LL++G ++ + +++ S+ +L + TGHT + T F T D+L ++S + D
Sbjct: 58 WNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDEL-VVSGAGD 116
Query: 148 KSVGLWDIST-------EERI---ANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYD 197
V L++ S + I A + HT ++ A P +P+++ S S D T++ +D
Sbjct: 117 AEVRLFNTSRLSGRAEDDNAIIPSALYQCHTRRVKKLAVEPGNPNVVWSASEDGTLRQHD 176
Query: 198 CRSN 201
R +
Sbjct: 177 FRES 180
Score = 35.1 bits (77), Expect = 0.12
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNE-HTDYIRAGAASP-ISP 181
GH G V+ + + +IS SDD + +W+ S+ + + + + HT I P S
Sbjct: 48 GHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSD 107
Query: 182 DIILSGSYDHTVKLYD 197
++++SG+ D V+L++
Sbjct: 108 ELVVSGAGDAEVRLFN 123
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 43.2 bits (97), Expect = 4e-04
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRV--FTGHTGPVHRTFFTKDQLKII-SYSDDKSVGLWDI 155
+V G+ + + + N+ V + GH + F + ++ + SDD WDI
Sbjct: 134 IVVGLSDGSASVVSFTDSNLETVQEWKGHDFELWTASFDLNNPNLVYTGSDDCKFSCWDI 193
Query: 156 S---TEERI-ANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRS-----NETIMT 206
+ R+ N HT + +++P P I +GSYD T++++D RS NET +
Sbjct: 194 RDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVWDTRSVSRPLNET--S 251
Query: 207 VNHGSPVESTLFLPS-GGIFISA----GGTEIKVWDIFNGGKLLSNISQHH 252
V+ G V PS G+ ++A G KV D G++L + ++HH
Sbjct: 252 VSLGGGVWRIKHHPSLSGVVLAACMHNGFALAKVSD--GKGEVLESYNKHH 300
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 43.2 bits (97), Expect = 4e-04
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 19/225 (8%)
Query: 107 AVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLK-IISYSDDKSVGLWDISTEERIANFN 165
A KL + ++ + GH V + LK I S S D + LWDIS+ + F
Sbjct: 37 AAKLEKIFARPFVGAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFP 96
Query: 166 EHTDYIRAGAASPISPDIILSGSYDHTVKLYD----CRSNETIMTVNHGSPVESTLFLPS 221
H +R G + ++++S D TV+L++ + +I + N P + ++ +
Sbjct: 97 GHQGAVR-GLTASTDGNVLVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWKNA 155
Query: 222 ---------GGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASL 272
G +F +A G ++ +W+ N + + + +V ++R L++ S
Sbjct: 156 FWAVDHQFEGDLFATA-GAQLDIWN-HNRSQPVQSFQWGTDSVISVRFNPGEPNLLATSA 213
Query: 273 -DRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDI-LTVGMMDG 315
DR + IYD+ I S+A + + + LT DG
Sbjct: 214 SDRSITIYDLRLSSAARKIIMMTKTNSIAWNPMEPMNLTAANEDG 258
Score = 33.9 bits (74), Expect = 0.27
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTK---DQLKIISYSDDK 148
F GR V G + +V++F + ++ HT + R F K D +IS SDD
Sbjct: 287 FSPTGREFVTGSYDRSVRIFPYNGGHSREIY--HTKRMQRVFCVKYSCDATYVISGSDDT 344
Query: 149 SVGLWDISTEERI 161
++ LW E++
Sbjct: 345 NLRLWKAKASEQL 357
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 43.2 bits (97), Expect = 4e-04
Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 250 QHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILT 309
+H V+ L L + L S S D+ +K++ +S K + +I+ + ++ +S DD++
Sbjct: 243 RHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDDLVF 302
Query: 310 VGMMDGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKADTVEVANEV 357
G DG + + KRE V+ E + L++ + + A V + + V
Sbjct: 303 TGSADGTLKVWKRE--VQGKEMKHVLVQVLMKQENAVTALAVNLTDAV 348
Score = 32.3 bits (70), Expect = 0.82
Identities = 27/136 (19%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 197 DCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTV 255
+ R + ++ + H V G+ S + +KVW + + K L +I H V
Sbjct: 232 EVRRRKNVLKIRHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRL-SDSKCLESIEAHDDAV 290
Query: 256 TTLRLASNNSRLMSASLDRHVKIY--DVSTFKVVHNI-----DFPNAILSMAISEHDDIL 308
T+ ++ + + + S D +K++ +V ++ H + NA+ ++A++ D ++
Sbjct: 291 NTV-VSGFDDLVFTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVV 349
Query: 309 TVGMMDGIISIRKREE 324
G DG ++ +R++
Sbjct: 350 YCGSSDGTVNFWERQK 365
Score = 32.3 bits (70), Expect = 0.82
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 116 KNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGA 175
KNVL++ H V +D + S S DK++ +W +S + + + H D +
Sbjct: 237 KNVLKI--RHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVV 294
Query: 176 ASPISPDIILSGSYDHTVKLY 196
+ D++ +GS D T+K++
Sbjct: 295 SG--FDDLVFTGSADGTLKVW 313
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 42.7 bits (96), Expect = 6e-04
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 182 DIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTE--IKVWDIF 239
D+I S S+DH+V+ +D + + + + G + + I+AGG++ ++VWD
Sbjct: 284 DVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSDPILRVWDPR 343
Query: 240 NGGKL--LSNISQHHKTVTTLRL-ASNNSRLMSASLDRHVKIYDVSTFKVV-HNIDFP 293
G + S H ++ + S+ L+SAS D + ++D+ T + H FP
Sbjct: 344 KPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAVMTKHTHSFP 401
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 42.7 bits (96), Expect = 6e-04
Identities = 36/198 (18%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 90 GCFRADGRLLVAGIEEAAVKLFDVQSK-NVLRVFTGHTGPVHRTFFTKDQLKIISYSDDK 148
G +L +G + ++ D++++ + + GH + ++ D ++ S +D
Sbjct: 255 GALAWSSSVLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDN 314
Query: 149 SVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILS--GSYDHTVKLYDCRSNETIMT 206
+ +W+ + + + F EH ++A A SP ++ S G+ D ++ ++ +N +
Sbjct: 315 KLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNC 374
Query: 207 VNHGSPVESTLFLPSGGIFISAGG---TEIKVWDIFNGGKLLSNISQHHKTVTTLRLASN 263
V+ S V + ++ + +S G +I VW K L+ ++ H V L ++ +
Sbjct: 375 VDTNSQVCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSK-LATLTGHSYRVLYLAVSPD 433
Query: 264 NSRLMSASLDRHVKIYDV 281
+++ + D ++ ++V
Sbjct: 434 GQTIVTGAGDETLRFWNV 451
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 42.3 bits (95), Expect = 8e-04
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 173 AGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFIS-AGGT 231
AGA I +I SG + V +S+ T HG V + F PSG + S A G
Sbjct: 31 AGADYDIKLWLINSGQAEKKVPSVSYQSSLTY----HGCAVNTIRFSPSGELLASGADGG 86
Query: 232 EIKVWDIF-----NGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKV 286
E+ +W + K+ ++S H K V L+ + +++ L+S S+D I+DV+ V
Sbjct: 87 ELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSV 146
Query: 287 VHNID 291
+D
Sbjct: 147 HQILD 151
Score = 32.7 bits (71), Expect = 0.62
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 92 FRADGRLLVAGIEEAAVKLFDV------QSKNVLRVFTGHTGPVHRTFFTKDQLKIISYS 145
F G LL +G + + ++ + QS V + + H V ++ D +IS S
Sbjct: 72 FSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGS 131
Query: 146 DDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLY 196
D S +WD++ + H Y++ A P++ + S S D T ++Y
Sbjct: 132 VDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA-KYVASLSSDRTCRIY 181
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 42.3 bits (95), Expect = 8e-04
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 173 AGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFIS-AGGT 231
AGA I +I SG + V +S+ T HG V + F PSG + S A G
Sbjct: 31 AGADYDIKLWLINSGQAEKKVPSVSYQSSLTY----HGCAVNTIRFSPSGELLASGADGG 86
Query: 232 EIKVWDIF-----NGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKV 286
E+ +W + K+ ++S H K V L+ + +++ L+S S+D I+DV+ V
Sbjct: 87 ELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSV 146
Query: 287 VHNID 291
+D
Sbjct: 147 HQILD 151
Score = 32.7 bits (71), Expect = 0.62
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 92 FRADGRLLVAGIEEAAVKLFDV------QSKNVLRVFTGHTGPVHRTFFTKDQLKIISYS 145
F G LL +G + + ++ + QS V + + H V ++ D +IS S
Sbjct: 72 FSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGS 131
Query: 146 DDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLY 196
D S +WD++ + H Y++ A P++ + S S D T ++Y
Sbjct: 132 VDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA-KYVASLSSDRTCRIY 181
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 42.3 bits (95), Expect = 8e-04
Identities = 36/200 (18%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Query: 98 LLVAGIEEAAVKLFDVQ-SKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS 156
+L +G + ++ D++ ++ + GH V ++ D ++ S +D + +W+
Sbjct: 306 VLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQH 365
Query: 157 TEERIANFNEHTDYIRAGAASPISPDIILS--GSYDHTVKLYDCRSNETIMTVNHGSPVE 214
+ + + ++EHT ++A A SP ++ S G+ D ++ ++ +N + +++ S V
Sbjct: 366 STQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVC 425
Query: 215 STLFLPSGGIFISAGG---TEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSAS 271
+ + + +S G +I VW K ++ ++ H V L ++ + +++ +
Sbjct: 426 NLAWSKNVNELVSTHGYSQNQIIVWKYPTMSK-IATLTGHTYRVLYLAVSPDGQTIVTGA 484
Query: 272 LDRHVKIYDVSTFKVVHNID 291
D ++ ++V N D
Sbjct: 485 GDETLRFWNVFPSPKSQNTD 504
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 42.3 bits (95), Expect = 8e-04
Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 2/143 (1%)
Query: 94 ADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 153
+DGR L G + V ++DV+++ ++ F GH V F ++ S S D++V +W
Sbjct: 232 SDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVW 291
Query: 154 DISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPV 213
++ + I + H I A + + L+ D T+ + + ++ S +
Sbjct: 292 NVEDKAFITENHGHQGEIL--AIDALRKERALTVGRDRTMLYHKVPESTRMIYRAPASSL 349
Query: 214 ESTLFLPSGGIFISAGGTEIKVW 236
ES F+ + + +W
Sbjct: 350 ESCCFISDNEYLSGSDNGTVALW 372
Score = 38.7 bits (86), Expect = 0.009
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Query: 208 NHGSPVESTLFLPSGGIFISAGGTE--IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNS 265
NH S L + S G +++ GG + + +WD+ + + H TV+ L S
Sbjct: 220 NH-SRESLALAVSSDGRYLATGGVDRHVHIWDV-RTREHVQAFPGHRNTVSCLCFRYGTS 277
Query: 266 RLMSASLDRHVKIYDVSTFK-VVHNIDFPNAILSMAISEHDDILTVG 311
L S S DR VK+++V + N IL++ + LTVG
Sbjct: 278 ELYSGSFDRTVKVWNVEDKAFITENHGHQGEILAIDALRKERALTVG 324
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 226 ISAGGTEIKVW---DIF--NGGKLLSNISQHHKTVT-TLRLASNNSRLMSASLDRHVKIY 279
+S+G T+ +W +I +G KL +++H + L ++S+ L + +DRHV I+
Sbjct: 190 VSSGKTDKYIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVHIW 249
Query: 280 DVST 283
DV T
Sbjct: 250 DVRT 253
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 246 SNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFK 285
S I +H ++V ++ L+ ++SR SAS D + +DVS+ K
Sbjct: 155 SVIVKHRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGK 194
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 42.3 bits (95), Expect = 8e-04
Identities = 57/252 (22%), Positives = 100/252 (39%), Gaps = 26/252 (10%)
Query: 98 LLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI-- 155
L+ G E + + + V++ H V T D + + S D +V +WDI
Sbjct: 1018 LVSCGNWENSFHVISLTDGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDILR 1077
Query: 156 --STEERIANFNEHT---DYIRAGAASPI---------------SPDIILSGSYDHTVKL 195
+ E+R+ N + D + A A S I DI++SGS D T
Sbjct: 1078 MRTPEKRVRNTHAEVLRKDIVIADAPSHILCGHDDIITCLYVSTDLDIVISGSKDGTCVF 1137
Query: 196 YDCRSNETIMTVNH--GSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHK 253
+ R I ++ H GS V S L G + G ++ + GK L++ S+ +
Sbjct: 1138 HTLREGRYIRSLKHPSGSAV-SKLAASHHGRIVLYGDDDLSLHLYSINGKHLAS-SESNG 1195
Query: 254 TVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMM 313
+ L L+ L+SA + + ++T +VV + I++ ++ G
Sbjct: 1196 RINCLELSKCGEFLVSAGDQGQIIVRSMNTLEVVKRYNGAGKIITSLTVTQEECFLAGTK 1255
Query: 314 DGIISIRKREEP 325
DG + + E P
Sbjct: 1256 DGALLVYSIENP 1267
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 41.9 bits (94), Expect = 0.001
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 11/179 (6%)
Query: 87 AYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRV-FTGHTGPVHRTFFTKDQLKIISYS 145
A G ++G + G+ A +K F+VQ+ L + G G V+ L + +
Sbjct: 173 AEAGSLISEGPWVFLGLPNA-IKAFNVQTSQDLHLQAAGVVGQVNAMTIANGML--FAGT 229
Query: 146 DDKSVGLWDISTEERIANFNEHTDYI-RAGAAS--PISPDIILSGSYDHTVKLYDCRSNE 202
S+ +W +T+ F T +G + + ++ SGS D T+K++D + +
Sbjct: 230 SSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKMWDLNTLQ 289
Query: 203 TIMTV-NHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGG--KLLSNISQHHKTVTTL 258
IMT+ H V S L I S GT IKVW G K++ Q +V L
Sbjct: 290 CIMTLKQHTGTVTSLLCWDKCLISSSLDGT-IKVWAYSENGILKVVQTRRQEQSSVHAL 347
Score = 38.3 bits (85), Expect = 0.012
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 236 WDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNA 295
W F G +++++ H+K + + L + +L S S+D ++++D ++ + VH+I+ +A
Sbjct: 115 WSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINL-DA 173
Query: 296 ILSMAISE 303
ISE
Sbjct: 174 EAGSLISE 181
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 41.9 bits (94), Expect = 0.001
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Query: 182 DIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTE--IKVWDIF 239
D+I S S+DH+V+ +D + + + + G + + I+AGG++ ++VWD
Sbjct: 284 DVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSDPILRVWDPR 343
Query: 240 NGGKL--LSNISQHHKTVTTLRL-ASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPN 294
G + S H ++ + S+ L+SAS D + ++D+ T + ID N
Sbjct: 344 KPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHN 401
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 41.9 bits (94), Expect = 0.001
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 112 DVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEE-----RIANFNE 166
D +S +VLR GH V + + + DKSV +W+I EE IA
Sbjct: 81 DSESVSVLR---GHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTG 137
Query: 167 HTDYIRAGAASPISPDIILSGSYDHTVKL---------YDCRSNETIMTVNHGSPVESTL 217
H++ ++ P + D++ S SYD+T+K+ Y+C + + H S V S
Sbjct: 138 HSEDVKMVLWHP-TMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSIS 196
Query: 218 FLPSGGIFIS-AGGTEIKVW 236
F +G ++ + +K+W
Sbjct: 197 FNAAGDKMVTCSDDLAVKIW 216
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 41.9 bits (94), Expect = 0.001
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
G++ + F+ D ++++ S D S+ ++D+ HT + + S ++
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 184 ILSGSYDHTVKLYD--C---RSNETIMTVNHGSPVESTLFLPS---GGIFISAGGTE-IK 234
ILSGS D+ K++D C R + V H +E F+ S G FIS G + IK
Sbjct: 287 ILSGSDDNLCKVWDRRCFIGRDKPAGVLVGH---LEGVTFIDSRGDGRYFISNGKDQTIK 343
Query: 235 VWDI 238
+WDI
Sbjct: 344 LWDI 347
Score = 40.3 bits (90), Expect = 0.003
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLK-IISYSDDKSV 150
F DGR +VAG + ++ ++D+++ V HT V+ F + I+S SDD
Sbjct: 237 FSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLC 296
Query: 151 GLWD----ISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMT 206
+WD I ++ H + + S +S D T+KL+D R +
Sbjct: 297 KVWDRRCFIGRDKPAGVLVGHLEGV-TFIDSRGDGRYFISNGKDQTIKLWDIRKMSSSAP 355
Query: 207 VNH 209
H
Sbjct: 356 ARH 358
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 41.5 bits (93), Expect = 0.001
Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 99 LVAGIEEAAVKLFDVQSK------NVLRVFTGHTGPVHRT-FFTKDQLKIISYSDDKSVG 151
L++G ++ + L+DV + N + V+ GH + + K++ S DD +
Sbjct: 185 LLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLV 244
Query: 152 LWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTV--NH 209
+WD+ T + H I + +P + ++ + S D TV L+D R + V H
Sbjct: 245 IWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKH 304
Query: 210 GSPVESTLFLPSGGIFISAGGTE--IKVWDI 238
V + P+ +++ G + + VWDI
Sbjct: 305 EGEVFQVEWDPNHETVLASSGEDRRLMVWDI 335
Score = 32.3 bits (70), Expect = 0.82
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 11/117 (9%)
Query: 175 AASPISPDIILSGSYDHTVKLYDCRSNETIMTVN-------HGSPVESTLF-LPSGGIFI 226
A S +LSGS D + L+D + T +N H S +E + + + IF
Sbjct: 176 AWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFG 235
Query: 227 SAG-GTEIKVWDIFNGGKLLSNISQHHKTVTTLRL-ASNNSRLMSASLDRHVKIYDV 281
SAG ++ +WD+ ++ + H + + L N L +AS D V ++D+
Sbjct: 236 SAGDDCQLVIWDL-RTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDL 291
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 41.5 bits (93), Expect = 0.001
Identities = 34/187 (18%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 145 SDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETI 204
SD K++ +W E ++F ++ ++A ++ D I +G D ++++ S E+
Sbjct: 115 SDSKNIRVWKNHVE--FSSFKSNSGLVKAIV---LAGDKIFTGHQDGKIRVWKAASKESN 169
Query: 205 MTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNIS-QHHKTVTTLRLASN 263
+ G+ +P+ +I ++ + + + +H ++ L L+ +
Sbjct: 170 VHRRVGT-------MPNLLDYIRNSIVPSSYFNFTRRNRSSAALGFRHLDAISCLALSED 222
Query: 264 NSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISIRKRE 323
L S S D+ K++ VS + V +++ ++ +S D ++ G DG + + +RE
Sbjct: 223 KRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDGLVFTGSADGTVKVWRRE 282
Query: 324 EPVRQSE 330
+ + ++
Sbjct: 283 DQAKDTK 289
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 125 HTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDII 184
H + ++D+ + S S DK+ +W +S + + N H D + A + ++
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSG--FDGLV 267
Query: 185 LSGSYDHTVKLY 196
+GS D TVK++
Sbjct: 268 FTGSADGTVKVW 279
Score = 30.3 bits (65), Expect = 3.3
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 91 CFRADGRLLVAGIEEAAVKLF---DVQSKNV-LRVFTGHTGPVHRTFFTKDQLKI----- 141
C A G L+ +G + ++++ + ++V L V TGH GPV +DQ +
Sbjct: 348 CLVAAGNLMFSGSADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVERDQESVSGERR 407
Query: 142 -ISYSD--DKSVGLWDIS 156
I YS D+SV +W +S
Sbjct: 408 WIVYSGSLDRSVKMWRVS 425
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 41.1 bits (92), Expect = 0.002
Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 90 GCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKS 149
GC ++G L+ G+ VK +++++ N + +G G V+ D L + + D S
Sbjct: 196 GCVLSEGPWLLVGMPNL-VKAWNIET-NADQSLSGPVGQVYSLVVGTDLL--FAGTQDGS 251
Query: 150 VGLWDISTEERIANFNEH-TDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN 208
+ W + + T + A + + + SGS D T+K++ + + I T+
Sbjct: 252 ILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLT 311
Query: 209 HGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNIS--QHHKTVTTLRLASNNSR 266
S V +L + + +K+W GG L + + H + + ++
Sbjct: 312 DHSSVVMSLICWDQFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVLALCGVHDAEAK 371
Query: 267 --LMSASLDRHVKIYDVSTF 284
L+ A D +++YD+ +F
Sbjct: 372 PVLLCACNDNTLRLYDLPSF 391
Score = 32.3 bits (70), Expect = 0.82
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 173 AGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTE 232
+G A P D + +GS D T++++DC S + + G + L S G ++ G
Sbjct: 155 SGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEIGCVL---SEGPWLLVGMPN 211
Query: 233 -IKVWDI 238
+K W+I
Sbjct: 212 LVKAWNI 218
Score = 29.1 bits (62), Expect = 7.6
Identities = 16/74 (21%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 246 SNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHD 305
++++ H V TL + +N RL S S+D+ +K++ + + + + ++++ M++ D
Sbjct: 268 ASLTGHTLAVVTLYVGAN--RLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVV-MSLICWD 324
Query: 306 DILTVGMMDGIISI 319
L +D + I
Sbjct: 325 QFLLSCSLDNTVKI 338
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 41.1 bits (92), Expect = 0.002
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 90 GCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYS---- 145
G R D LLV E+ +++LFD+ + L++ R FT +I S
Sbjct: 31 GFHRTDD-LLVTSSEDDSLRLFDIANAKQLKITYHKKHGTDRVCFTHHPSSLICSSRYNL 89
Query: 146 DDKSVGLWDIST-EERIAN-FNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNET 203
+ L +S + RI F H D + + SPI+ D +SGS D +V+L+D R N
Sbjct: 90 ESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPIN-DSFMSGSLDRSVRLWDLRVN-A 147
Query: 204 IMTVNHGSPVESTLFLPSGGIF-ISAGGTEIKVWD 237
+ H + + G +F I+ G +K++D
Sbjct: 148 CQGILHLRGRPAVAYDQQGLVFAIAMEGGAVKLFD 182
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 41.1 bits (92), Expect = 0.002
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 249 SQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDIL 308
++H+ V++L L L S+S D +K++ ++ K + +I + ++ +S DD++
Sbjct: 232 TKHNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDDLV 291
Query: 309 TVGMMDGIISIRKRE 323
G DG + + KRE
Sbjct: 292 FTGSADGTVKVWKRE 306
Score = 38.3 bits (85), Expect = 0.012
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 197 DCRSNETIMTVNHGSPVES-TLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTV 255
+ R N + H V S +L + G ++ S+ T IKVW I + K L +I H +
Sbjct: 222 EVRRNRNSVKTKHNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADS-KCLESIHAHDDAI 280
Query: 256 TTLRLASNNSRLMSASLDRHVKIY--DVSTFKVVHNI-----DFPNAILSMAISEHDDIL 308
++ ++ + + + S D VK++ ++ H + NA+ ++A+ I+
Sbjct: 281 NSV-MSGFDDLVFTGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIV 339
Query: 309 TVGMMDGIISIRKREE 324
G DG+++ +R +
Sbjct: 340 YCGSSDGLVNYWERSK 355
Score = 29.5 bits (63), Expect = 5.8
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 116 KNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGA 175
+N V T H V + + S S D ++ +W I+ + + + + H D I +
Sbjct: 225 RNRNSVKTKHNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVM 284
Query: 176 ASPISPDIILSGSYDHTVKLY 196
+ D++ +GS D TVK++
Sbjct: 285 SG--FDDLVFTGSADGTVKVW 303
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 91 CFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFT-KD-----QLKIISY 144
CF G LL+AG + V ++D+Q ++ +V T HT PV FF +D Q K+I+
Sbjct: 485 CFNQIGSLLLAGYGDGHVTVWDMQRASIAKVITEHTAPVVYAFFLGRDSQGSRQFKVIT- 543
Query: 145 SDDKSV 150
SD K V
Sbjct: 544 SDTKGV 549
>At1g08190.1 68414.m00905 vacuolar assembly protein, putative
(VPS41) 99.8% identical to Vacuolar assembly protein
VPS41 homolog (SP:P93043) [Arabidopsis thaliana];
similar to vacuolar assembly protein vps41 GI:1835787
from [Lycopersicon esculentum]
Length = 980
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Query: 79 NISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQ 138
N+ + C R++ G + V++ D+ N ++ F HT PV+ F +
Sbjct: 52 NVPALLSNDAASCIAVAARMIALGTHDGTVRILDLLG-NQVKEFRAHTAPVNDINFDTEG 110
Query: 139 LKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPD 182
I S SDD SV + + T++ F DY R A + PD
Sbjct: 111 EYIGSCSDDGSVVINSLFTDDEKMKF----DYHRPMKAISLDPD 150
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 40.7 bits (91), Expect = 0.002
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 183 IILSGSYDHTVKLYDCRSNETIMTVN--HGSPVESTLFLPSGGIFISAGGTEIKVWDIFN 240
++ +G+ D T+++++ S +T++ + H S V+S F SG +S G +VWD+
Sbjct: 156 VLATGAEDGTLRVFEWPSMKTLLNESKTHAS-VKSLTFSESGKFLVSLGAPLCRVWDVNA 214
Query: 241 GGKLLSNISQHHKTVTTLRLASNNS----RLMSASLDRHVKI--YDVSTFKVVHN--IDF 292
+ S + + + R + +NS ++A+ R I +D ++++ + I
Sbjct: 215 SAAIASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKR 274
Query: 293 PNAILSMAISEHDDILTVGMMDG-IISIRKREEPVRQSEKRKNL-----LKFIPD 341
N+I + +S +L VG ++G ++ I + Q K+ +L L F PD
Sbjct: 275 NNSISAFNVSADGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPD 329
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 40.7 bits (91), Expect = 0.002
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 183 IILSGSYDHTVKLYDCRSNETIMTVN--HGSPVESTLFLPSGGIFISAGGTEIKVWDIFN 240
++ +G+ D T+++++ S +T++ + H S V+S F SG +S G +VWD+
Sbjct: 156 VLATGAEDGTLRVFEWPSMKTLLNESKTHAS-VKSLTFSESGKFLVSLGAPLCRVWDVNA 214
Query: 241 GGKLLSNISQHHKTVTTLRLASNNS----RLMSASLDRHVKI--YDVSTFKVVHN--IDF 292
+ S + + + R + +NS ++A+ R I +D ++++ + I
Sbjct: 215 SAAIASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKR 274
Query: 293 PNAILSMAISEHDDILTVGMMDG-IISIRKREEPVRQSEKRKNL-----LKFIPD 341
N+I + +S +L VG ++G ++ I + Q K+ +L L F PD
Sbjct: 275 NNSISAFNVSADGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPD 329
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 40.7 bits (91), Expect = 0.002
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 10/171 (5%)
Query: 184 ILSGSYDHTVKLYDCRSNET--IMTVN-HGSPVESTLFLPSG-GIFISAGGTEIKVWDIF 239
+L+ + DHTV L+D + T ++T++ PV S + P G + + +E+++WD
Sbjct: 153 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 212
Query: 240 NGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNI--DFPNAIL 297
+ +L + H V + LA NN L + +D + DV + +
Sbjct: 213 SNRQLRTLKGGHQSRVGS--LAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVC 270
Query: 298 SMAISEHDDILTVGMMDGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKA 348
+ S L G D ++ I R V S L + +HTS KA
Sbjct: 271 GLKWSGSGQQLASGGNDNVVHIWDRS--VASSNSTTQWLHRLEEHTSAVKA 319
Score = 30.7 bits (66), Expect = 2.5
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 18/189 (9%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFT-GHTGPVHRTFFTKDQLKIISYSDDKSVGLW 153
DGR + G+ + V+L+D S LR GH V + L + D +
Sbjct: 193 DGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHIL--TTGGMDGLIINN 250
Query: 154 DISTEERIA-NFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYD---CRSNETIMTVN- 208
D+ I + HT + G S + SG D+ V ++D SN T ++
Sbjct: 251 DVRIRSPIVETYRGHTQEV-CGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHR 309
Query: 209 ---HGSPVESTLFLPSGGIFISAGG----TEIKVWDIFNGGKLLSNISQHHKTVTTLRLA 261
H S V++ + P ++ GG IK W+ G L N V +L +
Sbjct: 310 LEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACL--NSVDTGSQVCSLLWS 367
Query: 262 SNNSRLMSA 270
N L+S+
Sbjct: 368 KNERELLSS 376
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 40.7 bits (91), Expect = 0.002
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 10/171 (5%)
Query: 184 ILSGSYDHTVKLYDCRSNET--IMTVN-HGSPVESTLFLPSG-GIFISAGGTEIKVWDIF 239
+L+ + DHTV L+D + T ++T++ PV S + P G + + +E+++WD
Sbjct: 143 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 202
Query: 240 NGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNI--DFPNAIL 297
+ +L + H V + LA NN L + +D + DV + +
Sbjct: 203 SNRQLRTLKGGHQSRVGS--LAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVC 260
Query: 298 SMAISEHDDILTVGMMDGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKA 348
+ S L G D ++ I R V S L + +HTS KA
Sbjct: 261 GLKWSGSGQQLASGGNDNVVHIWDRS--VASSNSTTQWLHRLEEHTSAVKA 309
Score = 30.7 bits (66), Expect = 2.5
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 18/189 (9%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFT-GHTGPVHRTFFTKDQLKIISYSDDKSVGLW 153
DGR + G+ + V+L+D S LR GH V + L + D +
Sbjct: 183 DGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHIL--TTGGMDGLIINN 240
Query: 154 DISTEERIA-NFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYD---CRSNETIMTVN- 208
D+ I + HT + G S + SG D+ V ++D SN T ++
Sbjct: 241 DVRIRSPIVETYRGHTQEV-CGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHR 299
Query: 209 ---HGSPVESTLFLPSGGIFISAGG----TEIKVWDIFNGGKLLSNISQHHKTVTTLRLA 261
H S V++ + P ++ GG IK W+ G L N V +L +
Sbjct: 300 LEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACL--NSVDTGSQVCSLLWS 357
Query: 262 SNNSRLMSA 270
N L+S+
Sbjct: 358 KNERELLSS 366
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 250 QHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILT 309
+H+ V+ L L L S S D+ +K++ +S K + +I + ++ + DD+L
Sbjct: 247 RHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDDLLF 306
Query: 310 VGMMDGIISIRKRE 323
G DG + + KRE
Sbjct: 307 TGSADGTLKVWKRE 320
Score = 33.5 bits (73), Expect = 0.35
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 116 KNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGA 175
KNVL++ H V ++ + S S DK++ +W +S + + + H D I A
Sbjct: 241 KNVLKI--RHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVA 298
Query: 176 ASPISPDIILSGSYDHTVKLY 196
A D++ +GS D T+K++
Sbjct: 299 AG--FDDLLFTGSADGTLKVW 317
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 40.3 bits (90), Expect = 0.003
Identities = 52/260 (20%), Positives = 106/260 (40%), Gaps = 23/260 (8%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRV---FTGHTGPVHRTFFT--KDQLKIISYSDDKS 149
DG L V+L+ +R H G V+ F+ QL + + DDK+
Sbjct: 428 DGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKT 487
Query: 150 VGLWDISTEERIANFNEHTDYIRAGAAS-PISPDIILSGSYDHTVK--LYDCRSNETIMT 206
+ +WD +T + F H + + + I S + D +K LYD +
Sbjct: 488 IKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYDNMGSR---- 543
Query: 207 VNHGSPVE--STLFLPSGGIFISAGGTE------IKVWDIFNGGKLLSNISQHHKTVTTL 258
V++ +P +T+ + G + + GT I W+ G + H +++ +
Sbjct: 544 VDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVV 603
Query: 259 RLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILS---MAISEHDDILTVGMMDG 315
+ + +R ++A D +K +D+ T +++ ID + + + ++ +L V D
Sbjct: 604 QFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLAVSANDN 663
Query: 316 IISIRKREEPVRQSEKRKNL 335
+I + + +R +NL
Sbjct: 664 MIKVMANSDGLRLLHTVENL 683
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 40.3 bits (90), Expect = 0.003
Identities = 52/260 (20%), Positives = 106/260 (40%), Gaps = 23/260 (8%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRV---FTGHTGPVHRTFFT--KDQLKIISYSDDKS 149
DG L V+L+ +R H G V+ F+ QL + + DDK+
Sbjct: 428 DGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKT 487
Query: 150 VGLWDISTEERIANFNEHTDYIRAGAAS-PISPDIILSGSYDHTVK--LYDCRSNETIMT 206
+ +WD +T + F H + + + I S + D +K LYD +
Sbjct: 488 IKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYDNMGSR---- 543
Query: 207 VNHGSPVE--STLFLPSGGIFISAGGTE------IKVWDIFNGGKLLSNISQHHKTVTTL 258
V++ +P +T+ + G + + GT I W+ G + H +++ +
Sbjct: 544 VDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVV 603
Query: 259 RLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILS---MAISEHDDILTVGMMDG 315
+ + +R ++A D +K +D+ T +++ ID + + + ++ +L V D
Sbjct: 604 QFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLAVSANDN 663
Query: 316 IISIRKREEPVRQSEKRKNL 335
+I + + +R +NL
Sbjct: 664 MIKVMANSDGLRLLHTVENL 683
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 40.3 bits (90), Expect = 0.003
Identities = 35/167 (20%), Positives = 74/167 (44%), Gaps = 4/167 (2%)
Query: 159 ERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLF 218
+R+ N D + SP S +++++ S+D ++LYD S+ + +N + + F
Sbjct: 4 DRLEFENPIEDAVSRLRFSPQSNNLLVA-SWDSYLRLYDVESSSLSLELNSQAALLDCCF 62
Query: 219 LPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKI 278
F S I+ +D+ N G + I +H T++ + ++S D +K
Sbjct: 63 ENESTSFTSGSDGFIRRYDL-NAG-TVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKF 120
Query: 279 YDV-STFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISIRKREE 324
+D +V + D A+ + +S ++ ++ V I +R +E
Sbjct: 121 WDTRQRESLVFSTDAGGAVGCVTVSGNNLVVCVDASMHIYDLRNLDE 167
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 40.3 bits (90), Expect = 0.003
Identities = 35/167 (20%), Positives = 74/167 (44%), Gaps = 4/167 (2%)
Query: 159 ERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLF 218
+R+ N D + SP S +++++ S+D ++LYD S+ + +N + + F
Sbjct: 4 DRLEFENPIEDAVSRLRFSPQSNNLLVA-SWDSYLRLYDVESSSLSLELNSQAALLDCCF 62
Query: 219 LPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKI 278
F S I+ +D+ N G + I +H T++ + ++S D +K
Sbjct: 63 ENESTSFTSGSDGFIRRYDL-NAG-TVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKF 120
Query: 279 YDV-STFKVVHNIDFPNAILSMAISEHDDILTVGMMDGIISIRKREE 324
+D +V + D A+ + +S ++ ++ V I +R +E
Sbjct: 121 WDTRQRESLVFSTDAGGAVGCVTVSGNNLVVCVDASMHIYDLRNLDE 167
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 40.3 bits (90), Expect = 0.003
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 250 QHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILT 309
+H V+ L LA + L SAS DR VK++ + K + +I + ++ +++ + ++
Sbjct: 133 KHSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVN-SVTTAESLVF 191
Query: 310 VGMMDGIISIRKRE 323
G DG + + KRE
Sbjct: 192 TGSADGTVKVWKRE 205
Score = 34.7 bits (76), Expect = 0.15
Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 15/245 (6%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVF-TGHTGP-VHRTFFTKDQLKIISYSDDKS 149
F+++ L+ A + K+F +RV+ T P V+ + LK + S K
Sbjct: 58 FKSNSGLVKAIVISREAKVFTGHQDGKIRVWKTSSKNPRVYTRAGSLPALKDVLKSSVKP 117
Query: 150 VGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVN- 208
++ R A + +H+D + + + ++ S S+D TVK++ + I ++
Sbjct: 118 SNYVEVR-RCRTALWIKHSDAVSCLSLAE-DQGLLYSASWDRTVKVWRIHDLKCIESIKA 175
Query: 209 HGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGK-----LLSNISQHHKTVTTLRLASN 263
H V S S SA GT +KVW GK L + + VT L ++
Sbjct: 176 HDDAVNSVTTAESLVFTGSADGT-VKVWKREIRGKRTAHSLFQTLLKQESAVTA--LVTS 232
Query: 264 NSRLMSASLDRHVKIYDVSTFKVVHNIDF--PNAILSMAISEHDDILTVGMMDGIISIRK 321
+ + S S D V +++ K++ + + + + + I+ +L G D I + +
Sbjct: 233 HMAVYSGSSDGAVNFWEMGDKKLLKHCEVFKKHRLAVLCIAAAGKLLFSGAADKKICVWR 292
Query: 322 REEPV 326
RE V
Sbjct: 293 REGKV 297
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 91 CFRADGRLLVAGIEEAAVKLFDVQSK--NVLRVFTGHTGPV 129
C A G+LL +G + + ++ + K + V TGHTGPV
Sbjct: 271 CIAAAGKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPV 311
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 39.5 bits (88), Expect = 0.005
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 184 ILSGSYDHTVKLYDCRSNETIMTVN---HGSPVESTLFLPSGGIFISAGGTEIKVWDI-F 239
+++ S D +++LYD S + T+N +G + P+ I+ S G + + +
Sbjct: 48 MVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSL 107
Query: 240 NGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYD 280
+ K L HH V +L L S +S SLDR V ++D
Sbjct: 108 HDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 148
Score = 36.3 bits (80), Expect = 0.050
Identities = 41/198 (20%), Positives = 83/198 (41%), Gaps = 14/198 (7%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSD----D 147
F +V ++ +++L+DV S L+ V FT +I YS D
Sbjct: 41 FHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVI-YSSRNGWD 99
Query: 148 KSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSN--ETIM 205
S+ L + + + F H D + + + +SGS D TV L+D R + ++
Sbjct: 100 DSLRLLSLHDNKYLRYFKGHHDRV-VSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLL 158
Query: 206 TVNHGSPVESTLFLPSGGIFISAGGTEIKVWD--IFNGGKL-LSNISQHHKTVTTLRLAS 262
V G P + + G IF A G I+++D ++ G + ++ ++ ++
Sbjct: 159 RV-QGRP--AAAYDDQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSN 215
Query: 263 NNSRLMSASLDRHVKIYD 280
+ ++ ++D + + D
Sbjct: 216 DGRLMLLTTMDGFIHVLD 233
Score = 29.1 bits (62), Expect = 7.6
Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 4/129 (3%)
Query: 113 VQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIR 172
+QS VF + + F K +++ SDD S+ L+D+++ + N +
Sbjct: 20 IQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVD 79
Query: 173 AGAASPISPDIILS--GSYDHTVKLYDCRSNETIMTV-NHGSPVESTLFLPSGGIFISAG 229
+ +I S +D +++L N+ + H V S G FIS
Sbjct: 80 LVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGS 139
Query: 230 -GTEIKVWD 237
+ +WD
Sbjct: 140 LDRTVLLWD 148
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 39.5 bits (88), Expect = 0.005
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 184 ILSGSYDHTVKLYDCRSNETIMTVN---HGSPVESTLFLPSGGIFISAGGTEIKVWDI-F 239
+++ S D +++LYD S + T+N +G + P+ I+ S G + + +
Sbjct: 45 MVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSL 104
Query: 240 NGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYD 280
+ K L HH V +L L S +S SLDR V ++D
Sbjct: 105 HDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 145
Score = 36.3 bits (80), Expect = 0.050
Identities = 41/198 (20%), Positives = 83/198 (41%), Gaps = 14/198 (7%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSD----D 147
F +V ++ +++L+DV S L+ V FT +I YS D
Sbjct: 38 FHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVI-YSSRNGWD 96
Query: 148 KSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSN--ETIM 205
S+ L + + + F H D + + + +SGS D TV L+D R + ++
Sbjct: 97 DSLRLLSLHDNKYLRYFKGHHDRV-VSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLL 155
Query: 206 TVNHGSPVESTLFLPSGGIFISAGGTEIKVWD--IFNGGKL-LSNISQHHKTVTTLRLAS 262
V G P + + G IF A G I+++D ++ G + ++ ++ ++
Sbjct: 156 RV-QGRP--AAAYDDQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSN 212
Query: 263 NNSRLMSASLDRHVKIYD 280
+ ++ ++D + + D
Sbjct: 213 DGRLMLLTTMDGFIHVLD 230
Score = 29.1 bits (62), Expect = 7.6
Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 4/129 (3%)
Query: 113 VQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIR 172
+QS VF + + F K +++ SDD S+ L+D+++ + N +
Sbjct: 17 IQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVD 76
Query: 173 AGAASPISPDIILS--GSYDHTVKLYDCRSNETIMTV-NHGSPVESTLFLPSGGIFISAG 229
+ +I S +D +++L N+ + H V S G FIS
Sbjct: 77 LVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGS 136
Query: 230 -GTEIKVWD 237
+ +WD
Sbjct: 137 LDRTVLLWD 145
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 39.5 bits (88), Expect = 0.005
Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 68 VYDPVTKVVAKNISKFVEAAYGGC--FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGH 125
+ DP+ + I +++E C F G LL AG + ++D +++ + + +
Sbjct: 5 IIDPLQGDFPEVIEEYLEHGVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDN 64
Query: 126 --TGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIA 162
+ + ++K +++ + DKS+ LWD+ST E+IA
Sbjct: 65 DCSAAITSVSWSKYGHRLLVSAADKSLTLWDVSTGEKIA 103
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 39.5 bits (88), Expect = 0.005
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 141 IISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRS 200
+ + + D WD+ + + F H+DY+ S S IL+GS D T +++DC++
Sbjct: 174 VFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHT-VVSRSSASQILTGSEDGTARIWDCKT 232
Query: 201 NETIMTV 207
+ + +
Sbjct: 233 GKCVKVI 239
Score = 36.3 bits (80), Expect = 0.050
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 221 SGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYD 280
SG +F +AG + WD+ GK+ H + T+ S+ S++++ S D +I+D
Sbjct: 171 SGSVFTAAGDSCAYCWDV-ESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWD 229
Query: 281 VSTFKVV 287
T K V
Sbjct: 230 CKTGKCV 236
Score = 34.7 bits (76), Expect = 0.15
Identities = 20/110 (18%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 111 FDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEE--RIANFNEHT 168
+DV+S + F GH+ +H +I++ S+D + +WD T + ++ +
Sbjct: 186 WDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKK 245
Query: 169 DYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLF 218
+R + + + L + L++ ++E + T+ + V+ +F
Sbjct: 246 SRLRVSSMALDGSESWLVCGQGKNLALWNLPASECVQTIPIPAHVQDVMF 295
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 39.5 bits (88), Expect = 0.005
Identities = 32/145 (22%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Query: 183 IILSGSYDHTVKLYDCRSNETIMTVNHG-SPVESTLFLPSGGIFISAGGTEIKVWDIFNG 241
++ +G+ D T++++ S T++ + S V+ F SG +S GG +VWD+
Sbjct: 167 VLAAGAEDGTLRVFKWPSMNTLLNESQAHSSVKCLTFSESGQFLVSLGGPVCRVWDVNAS 226
Query: 242 GKLLSNISQHHKTVTTLRL----ASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFP---N 294
+ S + + + R A N ++A+ +R I T P N
Sbjct: 227 AAVASLSKEKDEMFASCRFSVDSAGNEVLYIAANTERGGSIITCDTKLWKRKWSKPIKKN 286
Query: 295 AILSMAISEHDDILTVGMMDGIISI 319
+I + +S +L +G ++G + I
Sbjct: 287 SISAFNVSADGKLLAIGTLEGDVLI 311
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 39.1 bits (87), Expect = 0.007
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 5/147 (3%)
Query: 100 VAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEE 159
+A + V+ FD++ ++++F + PV+ + + D + DD L D S +
Sbjct: 252 MASNNDCGVRDFDMERYKLVQLFR-YLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQ 310
Query: 160 RIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGS--PVESTL 217
I H DY A A P + +G+ D T +++D R + V G+ V S
Sbjct: 311 TIGTLKGHLDYSFASAWHP-NGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIR 369
Query: 218 FLPSGGIFISAGGTE-IKVWDIFNGGK 243
F G A + + ++D +G K
Sbjct: 370 FTSDGRYVAMAEPADFVHIYDTKSGYK 396
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 39.1 bits (87), Expect = 0.007
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 5/147 (3%)
Query: 100 VAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEE 159
+A + V+ FD++ ++++F + PV+ + + D + DD L D S +
Sbjct: 246 MASNNDCGVRDFDMERYKLVQLFR-YLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQ 304
Query: 160 RIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGS--PVESTL 217
I H DY A A P + +G+ D T +++D R + V G+ V S
Sbjct: 305 TIGTLKGHLDYSFASAWHP-NGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIR 363
Query: 218 FLPSGGIFISAGGTE-IKVWDIFNGGK 243
F G A + + ++D +G K
Sbjct: 364 FTSDGRYVAMAEPADFVHIYDTKSGYK 390
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 39.1 bits (87), Expect = 0.007
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKII-SYSDDKSV 150
F DGR L + + VK+ D ++ N L+V TGH F +I+ S S D V
Sbjct: 114 FSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEV 173
Query: 151 GLWDISTEERI 161
LW+ +T E I
Sbjct: 174 RLWNTTTSECI 184
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 39.1 bits (87), Expect = 0.007
Identities = 34/166 (20%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
GH + + K+ S S D ++ +WD ++ + + + N ++A A S IS
Sbjct: 185 GHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSIN-----LQAEAGSLISEGP 239
Query: 184 ILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGG- 242
+ + VK ++ ++++ + V + + +G +F I VW +
Sbjct: 240 WVFLGLPNAVKAFNVQNSKDVHLEGVVGQVHA-MTAANGMLFAGTSSGSILVWKATDSES 298
Query: 243 ---KLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFK 285
K L+++ HH T + L S S+D+ +K++D++T +
Sbjct: 299 DPFKYLTSLEGHHSGEVTCFVVGGEV-LYSGSVDKTIKVWDLNTLQ 343
Score = 35.9 bits (79), Expect = 0.066
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 125 HTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPD-I 183
H+G V T F + S S DK++ +WD++T + +H + S + D
Sbjct: 311 HSGEV--TCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTV----TSLLCWDKC 364
Query: 184 ILSGSYDHTVKLYDCRSNETIMTV 207
++S S D T+KL+ C NE++ V
Sbjct: 365 LISSSLDGTIKLWACSENESLKVV 388
Score = 34.3 bits (75), Expect = 0.20
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 87 AYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSD 146
A G ++G + G+ A VK F+VQ+ + + G G VH T + + +
Sbjct: 229 AEAGSLISEGPWVFLGLPNA-VKAFNVQNSKDVHL-EGVVGQVHA--MTAANGMLFAGTS 284
Query: 147 DKSVGLWDISTEERIA-NFNEHTDYIRAGAAS--PISPDIILSGSYDHTVKLYDCRSNET 203
S+ +W + E + + +G + + +++ SGS D T+K++D + +
Sbjct: 285 SGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNTLQC 344
Query: 204 IMTV-NHGSPVESTLFLPSGGIFISAGGTEIKVW 236
MT+ H V S L I S GT IK+W
Sbjct: 345 RMTLKQHIGTVTSLLCWDKCLISSSLDGT-IKLW 377
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/80 (22%), Positives = 39/80 (48%)
Query: 120 RVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPI 179
R + H + + K +++ S D+++ +WD+ + HT +++ + P
Sbjct: 122 RDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPT 181
Query: 180 SPDIILSGSYDHTVKLYDCR 199
+ D+++SGS D L+D R
Sbjct: 182 NSDLLVSGSRDGCFALWDLR 201
Score = 31.9 bits (69), Expect = 1.1
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 93 RADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHR--TFFTKDQLKIISYSDDKSV 150
+ D LL A ++ +K++DV+ V GHTG V + T L ++S S D
Sbjct: 138 KGDSCLLTASGDQT-IKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDL-LVSGSRDGCF 195
Query: 151 GLWDI---STEERIANFNEHTDYIRAGAASPISPDI 183
LWD+ S+ + T ++ SP+S I
Sbjct: 196 ALWDLRCKSSSHKEEFCINSTGMVKGAHLSPLSKRI 231
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 38.7 bits (86), Expect = 0.009
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 127 GPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILS 186
GPV R F K+ + S + + D++ +A+ +P + ++
Sbjct: 198 GPVARLRFLKNHFLLASVNMSGQLHYQDVTHGGMVASIRTGKGRTDVMEVNPYN-SVVGL 256
Query: 187 GSYDHTVKLYDCRSNETIMTVN-HGSPVESTLFLPSGGIFISAG-GTEIKVWDIFNGGKL 244
G TV ++ S ++ + H PV S F P+G + ++G +IK+WD+ ++
Sbjct: 257 GHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEV 316
Query: 245 LSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHN 289
+ S H KT L+ + L++A V+I S+ HN
Sbjct: 317 QTIHSFHAKT-----LSFSQKGLLAAGTGSFVQILGDSSGGSSHN 356
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 38.3 bits (85), Expect = 0.012
Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 13/174 (7%)
Query: 125 HTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNE-HTDYIRAGAASPISPD- 182
H G V+ F D ++S SDD+ V LWD T +F+ H + I P S D
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDR 113
Query: 183 IILSGSYDHTV---KLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTE--IKVWD 237
I++ + D V K+ + ET + H PV P G + +K +D
Sbjct: 114 TIVTSAADKQVRYSKILESGQVETSLLGKHQGPVHKLAVEPGSPFSFYTCGEDGAVKHFD 173
Query: 238 IFN--GGKLLSNISQHHKTVTTLRLAS----NNSRLMSASLDRHVKIYDVSTFK 285
+ L + V L + N L A +D + ++YD+ +++
Sbjct: 174 LRTRVATNLFTCKEAKFNLVVYLHAIAVDPRNPGLLAVAGMDEYARVYDIRSYR 227
Score = 38.3 bits (85), Expect = 0.012
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVF-TGHTGPVHRTFFT--KDQLKIISYSDDK 148
F ADG +L++G ++ V L+D Q+ +V F +GH + + F D I++ + DK
Sbjct: 63 FNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADK 122
Query: 149 SVGLWDI--STEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRS 200
V I S + + +H + A P SP + D VK +D R+
Sbjct: 123 QVRYSKILESGQVETSLLGKHQGPVHKLAVEPGSPFSFYTCGEDGAVKHFDLRT 176
Score = 31.1 bits (67), Expect = 1.9
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 11/131 (8%)
Query: 94 ADGRLLVAGIEEAAVKLFDV-QSKNVLRVFTG-HTGPVHRTFFTKDQ-LKIISYSDDKSV 150
+D R +V + V+ + +S V G H GPVH+ + +D +V
Sbjct: 110 SDDRTIVTSAADKQVRYSKILESGQVETSLLGKHQGPVHKLAVEPGSPFSFYTCGEDGAV 169
Query: 151 GLWDISTEE-------RIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNET 203
+D+ T + A FN Y+ A A P +P ++ D ++YD RS +
Sbjct: 170 KHFDLRTRVATNLFTCKEAKFNLVV-YLHAIAVDPRNPGLLAVAGMDEYARVYDIRSYRS 228
Query: 204 IMTVNHGSPVE 214
N P++
Sbjct: 229 EGWYNFTQPID 239
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 38.3 bits (85), Expect = 0.012
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 182 DIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNG 241
D +L S+D +V+LYD + HG V F F T+++ D FN
Sbjct: 29 DHLLVSSWDKSVRLYDANGDLMRGEFKHGGAVLDCCFHDDSSGFSVCADTKVRRID-FNA 87
Query: 242 GKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYD 280
GK + H K V + + ++++ S D+ +K +D
Sbjct: 88 GK-EDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWD 125
Score = 29.5 bits (63), Expect = 5.8
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 190 DHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNG-GKLLSN 247
D V+ D + + + H PV + + G I+ + IK WD G +
Sbjct: 77 DTKVRRIDFNAGKEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTERTQ 136
Query: 248 ISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDV 281
I + + L+ +RL+ A+ RHV IYD+
Sbjct: 137 IGTYMQPERVNSLSLVGNRLVVATAGRHVNIYDL 170
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 38.3 bits (85), Expect = 0.012
Identities = 51/260 (19%), Positives = 106/260 (40%), Gaps = 23/260 (8%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRV---FTGHTGPVHRTFFT--KDQLKIISYSDDKS 149
DG L V+L+ +R H G V+ F+ QL +I+ DDK+
Sbjct: 428 DGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKT 487
Query: 150 VGLWDISTEERIANFNEHTDYIRAGAAS-PISPDIILSGSYDHTVK--LYDCRSNETIMT 206
+ +WD +T + F H + + + I S + D +K LYD +
Sbjct: 488 IKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNMGSR---- 543
Query: 207 VNHGSPVE--STLFLPSGGIFISAGGTE------IKVWDIFNGGKLLSNISQHHKTVTTL 258
V++ +P +T+ + G + + GT I W+ G + H +++ +
Sbjct: 544 VDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVV 603
Query: 259 RLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILS---MAISEHDDILTVGMMDG 315
+ + +R ++A D +K +D+ +++ ID + + + ++ +L V +
Sbjct: 604 QFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGLQASPRIRFNKEGSLLAVSGNEN 663
Query: 316 IISIRKREEPVRQSEKRKNL 335
+I I + +R +N+
Sbjct: 664 VIKIMANSDGLRLLHTFENI 683
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 38.3 bits (85), Expect = 0.012
Identities = 51/260 (19%), Positives = 106/260 (40%), Gaps = 23/260 (8%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRV---FTGHTGPVHRTFFT--KDQLKIISYSDDKS 149
DG L V+L+ +R H G V+ F+ QL +I+ DDK+
Sbjct: 428 DGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKT 487
Query: 150 VGLWDISTEERIANFNEHTDYIRAGAAS-PISPDIILSGSYDHTVK--LYDCRSNETIMT 206
+ +WD +T + F H + + + I S + D +K LYD +
Sbjct: 488 IKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNMGSR---- 543
Query: 207 VNHGSPVE--STLFLPSGGIFISAGGTE------IKVWDIFNGGKLLSNISQHHKTVTTL 258
V++ +P +T+ + G + + GT I W+ G + H +++ +
Sbjct: 544 VDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVV 603
Query: 259 RLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILS---MAISEHDDILTVGMMDG 315
+ + +R ++A D +K +D+ +++ ID + + + ++ +L V +
Sbjct: 604 QFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGLQASPRIRFNKEGSLLAVSGNEN 663
Query: 316 IISIRKREEPVRQSEKRKNL 335
+I I + +R +N+
Sbjct: 664 VIKIMANSDGLRLLHTFENI 683
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 37.9 bits (84), Expect = 0.016
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 177 SPISPDIILSGSYDHTVKLYDCRS---NETIMTVNHGSPVESTLFLPSGG--IFISAGGT 231
+P+ P+++LS DH +++D R ++ + H V S F PS G I +
Sbjct: 321 NPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKILTTCQDN 380
Query: 232 EIKVWDIFNG 241
I++WD G
Sbjct: 381 RIRIWDSIFG 390
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 37.9 bits (84), Expect = 0.016
Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 13/172 (7%)
Query: 69 YDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGP 128
+DP ++ ++ V + Y G R L +G + ++K++ + + ++ T HT
Sbjct: 257 FDPAASLLGHTLA--VVSLYVGANR-----LYSGAMDNSIKVWSLDNLQCIQTLTEHTSV 309
Query: 129 VHRTFFTKDQLKIISYSDDKSVGLWDIST----EERIANFNEHTDYIRAGAASPISPDII 184
V + DQ ++S S D +V +W + E + E+ G + ++
Sbjct: 310 V-MSLICWDQF-LLSCSLDNTVKIWAATEGGNLEVTYTHKEEYGVLALCGVHDAEAKPVL 367
Query: 185 LSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVW 236
L D+++ LYD S + + S P G F G ++KVW
Sbjct: 368 LCSCNDNSLHLYDLPSFTERGKILAKQEIRSIQIGPGGIFFTGDGSGQVKVW 419
Score = 35.9 bits (79), Expect = 0.066
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 174 GAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTE- 232
G A P D + + S D TV+++DC S + +N G V + S G ++ G
Sbjct: 149 GIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCII---SEGPWLLVGMPNL 205
Query: 233 IKVWDIFNGGKLLSN 247
+K W+I N L N
Sbjct: 206 VKAWNIQNNADLSLN 220
Score = 34.7 bits (76), Expect = 0.15
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 236 WDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVST 283
W + LL+ + H K VT + L S + +L +AS D V+I+D ++
Sbjct: 128 WSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCAS 175
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 37.9 bits (84), Expect = 0.016
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 250 QHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILT 309
+H V+ L L L SAS DR +K++ ++ K + +I + ++ +S + I+
Sbjct: 204 KHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEAIVF 263
Query: 310 VGMMDGIISIRKREE 324
G DG + KR++
Sbjct: 264 SGSADGTVKAWKRDQ 278
Score = 34.7 bits (76), Expect = 0.15
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 197 DCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTV 255
+ + + T + + H V G+ SA IKVW I + K L +I H V
Sbjct: 193 EVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADS-KCLESIPAHDDAV 251
Query: 256 TTLRLASNNSRLMSASLDRHVKIY--DVSTFKVVHNI-----DFPNAILSMAISEHDDIL 308
++ +++ + + S S D VK + D H + +A+ ++A+S++ +
Sbjct: 252 NSV-VSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAV 310
Query: 309 TVGMMDGIISIRKREE 324
G DG+++ +RE+
Sbjct: 311 YFGSSDGLVNFWEREK 326
Score = 30.7 bits (66), Expect = 2.5
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
Query: 91 CFRADGRLLVAGIEEAAVKLF--DVQSKNVLRVFTGHTGPV-------HRTFFTKDQLKI 141
C G L+ +G + + ++ D L V TGHTGPV R + K
Sbjct: 343 CLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERRDKKW 402
Query: 142 ISYSD--DKSVGLWDIS 156
I YS DKSV +W +S
Sbjct: 403 IVYSGSLDKSVKVWGVS 419
Score = 29.9 bits (64), Expect = 4.4
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 125 HTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDII 184
H V +Q + S S D+++ +W I+ + + + H D + + ++ + I+
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVST--TEAIV 262
Query: 185 LSGSYDHTVKLY 196
SGS D TVK +
Sbjct: 263 FSGSADGTVKAW 274
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 37.5 bits (83), Expect = 0.022
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 13/164 (7%)
Query: 182 DIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDI-FN 240
D +L S+D V+LYD +N HG V F F + G + KV I FN
Sbjct: 30 DHLLVSSWDKRVRLYDVSTNSLKGEFLHGGAVLDCCFHDDFSGF--SVGADYKVRRIVFN 87
Query: 241 GGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDF-----PNA 295
GK + H K V + + ++++ S D+ VK +D P
Sbjct: 88 VGK-EDILGTHDKAVRCVEYSYAAGQVITGSWDKTVKCWDPRGASGPERTQVGTYLQPER 146
Query: 296 ILSMAISEHDDIL-TVGMMDGIISIRKREEPVRQSEKRKNLLKF 338
+ SM++ H ++ T G I +R +P ++R++ LK+
Sbjct: 147 VYSMSLVGHRLVVATAGRHVNIYDLRNMSQP---EQRRESSLKY 187
Score = 34.3 bits (75), Expect = 0.20
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 255 VTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDD 306
++ LR ++N+ L+ +S D+ V++YDVST + A+L HDD
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEFLHGGAVLDCCF--HDD 69
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 37.5 bits (83), Expect = 0.022
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 4/125 (3%)
Query: 37 VLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGG-CFRAD 95
VL K GA+ + +SP + + + V+D TK V N F A + +
Sbjct: 351 VLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPN 410
Query: 96 GRLLVAGIEEAAVKLFDVQSKNVLRVF--TGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 153
+++ G + V +++V R+ H G V+ F D + S +D SV LW
Sbjct: 411 NKMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAVAFI-DDCTVASSGEDASVRLW 469
Query: 154 DISTE 158
I +
Sbjct: 470 HIEPQ 474
Score = 37.1 bits (82), Expect = 0.029
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 26/168 (15%)
Query: 125 HTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERI---ANFNEHTDYIRAGAASPISP 181
H+ V+ ++ D K I+ S DK ++D T +++ A+ + H I A + SP S
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 182 DIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGG---------------IFI 226
+L+ S D + K+++ + TI GS +++ F+ SGG I +
Sbjct: 110 R-VLTVSADKSAKVWEVAEDGTI-----GSVIKTLSFMESGGAEDMLVGCLWQNDHLITV 163
Query: 227 SAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLR-LASNNSRLMSASLD 273
S GGT + ++ + K +S H K VT+L L N ++S S D
Sbjct: 164 SLGGT-MSLFSADDMDKPPLLLSGHIKNVTSLAVLGENQKTILSCSYD 210
Score = 35.9 bits (79), Expect = 0.066
Identities = 15/72 (20%), Positives = 36/72 (50%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDI 183
GH G ++ ++ D ++++ S DKS +W+++ + I + + ++ +G A +
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGC 153
Query: 184 ILSGSYDHTVKL 195
+ + TV L
Sbjct: 154 LWQNDHLITVSL 165
Score = 35.9 bits (79), Expect = 0.066
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 173 AGAASPISPD--IILSGSYDHTVKLY----DCRSNETIMTVNHGSPVESTLFLPSGGIFI 226
A AAS ISPD + G D + +Y D E + H + + P +F
Sbjct: 313 AVAASVISPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFA 372
Query: 227 SAGGT-EIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDV 281
S E VWD L+N+ H + +L + NN + + S+D V +Y+V
Sbjct: 373 SGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCVIVYEV 428
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 37.1 bits (82), Expect = 0.029
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 95 DGRLLVAGIEEAAVKLFDVQS--KNVLRVFTGHTGP---VHRTFFTKDQLKIISYSDDKS 149
DG+ + + + L+D+ K L+ F+GH + F D I S S+D
Sbjct: 408 DGKFFIVNLSCQEIHLWDLAGEWKQPLK-FSGHRQSKYVIRSCFGGLDSSFIASGSEDSQ 466
Query: 150 VGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLY 196
V +W++ + + + H+ + + +P +P ++ S S D T++++
Sbjct: 467 VYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 37.1 bits (82), Expect = 0.029
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 251 HHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNID--FPNAILSMAISEHDDIL 308
H V++L L+ + S L SAS DR KI+ S FK + +I+ +AI ++ +S+ D +
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSK-DGFV 249
Query: 309 TVGMMDGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKA 348
G D I + ++ +K+ +L+ + H S A
Sbjct: 250 YTGSADKKIKVWNKK------DKKHSLVATLTKHLSAVNA 283
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 37.1 bits (82), Expect = 0.029
Identities = 29/133 (21%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 165 NEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLF--LPSG 222
N H I + PI + ++GS+DH VK++D +++ ++ V T +
Sbjct: 100 NGHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMS 159
Query: 223 GIFISAG--GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNS-RLMSASLDRHVKIY 279
I+AG ++++ DI +G +S H V ++ ++++ L + D ++ +
Sbjct: 160 HTLIAAGTDDVQVRLCDIASGA-FSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFW 218
Query: 280 DV---STFKVVHN 289
D+ F+V+ N
Sbjct: 219 DIRRAGCFRVLDN 231
Score = 32.3 bits (70), Expect = 0.82
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLK---IISYSDDKSVG 151
D + + G + VK++D + V+ F G V+RT + + I + +DD V
Sbjct: 115 DTGMFITGSFDHYVKVWDTNTSQVVVDFK-MPGKVYRTAMSSMAMSHTLIAAGTDDVQVR 173
Query: 152 LWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCR 199
L DI++ + H D + + S S ++ +G D ++ +D R
Sbjct: 174 LCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIR 221
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 36.7 bits (81), Expect = 0.038
Identities = 57/284 (20%), Positives = 109/284 (38%), Gaps = 26/284 (9%)
Query: 60 ATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVL 119
ATC+V +Q A S++ A + DG LL + V ++ L
Sbjct: 404 ATCTVNLQ---------ASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDL 454
Query: 120 R---VFTGHTGPVHRTFFTK--DQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAG 174
R H G V+ F++ QL +++ +DK++ +WD T ++ F H + +
Sbjct: 455 RNHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
Query: 175 AA-SPISPDIILSGSYDHTVK--LYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGT 231
+ I S + D +K LYD + G S + G S G +
Sbjct: 515 CPHQKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDA-PGRSCTSMAYCADGTRLFSCGTS 573
Query: 232 E-----IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKV 286
+ I W+ G + + ++V ++ + ++ + A + VK +D+ + +
Sbjct: 574 KEGESFIVEWNESEGAVKRTYLGLGKRSVGVVQFDTMKNKFLVAGDEFQVKFWDMDSVDL 633
Query: 287 VHNIDFPNAILS---MAISEHDDILTVGMMDGIISIRKREEPVR 327
+ + + S + I++ +L V D I I E R
Sbjct: 634 LSSTAAEGGLPSSPCLRINKEGTLLAVSTTDNGIKILANAEGSR 677
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 36.7 bits (81), Expect = 0.038
Identities = 57/284 (20%), Positives = 109/284 (38%), Gaps = 26/284 (9%)
Query: 60 ATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVL 119
ATC+V +Q A S++ A + DG LL + V ++ L
Sbjct: 404 ATCTVNLQ---------ASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDL 454
Query: 120 R---VFTGHTGPVHRTFFTK--DQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAG 174
R H G V+ F++ QL +++ +DK++ +WD T ++ F H + +
Sbjct: 455 RNHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
Query: 175 AA-SPISPDIILSGSYDHTVK--LYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGT 231
+ I S + D +K LYD + G S + G S G +
Sbjct: 515 CPHQKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDA-PGRSCTSMAYCADGTRLFSCGTS 573
Query: 232 E-----IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKV 286
+ I W+ G + + ++V ++ + ++ + A + VK +D+ + +
Sbjct: 574 KEGESFIVEWNESEGAVKRTYLGLGKRSVGVVQFDTMKNKFLVAGDEFQVKFWDMDSVDL 633
Query: 287 VHNIDFPNAILS---MAISEHDDILTVGMMDGIISIRKREEPVR 327
+ + + S + I++ +L V D I I E R
Sbjct: 634 LSSTAAEGGLPSSPCLRINKEGTLLAVSTTDNGIKILANAEGSR 677
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 36.7 bits (81), Expect = 0.038
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 101 AGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEER 160
A + V+ FD++ ++ F PV+ T + D + D+ L D +T +
Sbjct: 251 ASNNDCGVRDFDMERYQLVNQFR-FPWPVNHTSLSPDGKLLTIVGDNPESLLVDPNTGKT 309
Query: 161 IANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGS--PVESTLF 218
+A + H D+ A A P +G+ D T +++D R+ + V G+ + S +
Sbjct: 310 LATLSGHLDFSFASAWHP-DGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIRY 368
Query: 219 LPSGGIFISAGGTE-IKVWDIFNG 241
G A + + V+D+ NG
Sbjct: 369 TSDGKYMAMAEPADFVHVYDVSNG 392
Score = 30.3 bits (65), Expect = 3.3
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 70 DPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQ--SKNVLRVFTGHTG 127
DP T +S ++ ++ + DG G ++ +++D++ SK+V V G+ G
Sbjct: 303 DPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSV-AVLRGNLG 361
Query: 128 PVHRTFFTKDQLKIISYSDDKSVGLWDIS----TEERIANFNE 166
+ +T D + V ++D+S TE+ I F E
Sbjct: 362 AIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFGE 404
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 36.3 bits (80), Expect = 0.050
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 121 VFTGHTGPVHRTFFTKDQLK-IISYSDDKSVGLWDISTEERIANFNE--HTDYIRAGAAS 177
++ GH V F + S DD + LWD T A E H + +
Sbjct: 276 IYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWN 335
Query: 178 PISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPV 213
P ++IL+GS D+TV+++D R N T V GSPV
Sbjct: 336 PHDNNLILTGSADNTVRVFD-RRNLTSNGV--GSPV 368
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 36.3 bits (80), Expect = 0.050
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 121 VFTGHTGPVHRTFFTKDQLK-IISYSDDKSVGLWDISTEERIANFNE--HTDYIRAGAAS 177
V+ GH V F+ + S DD + LWD T E H + +
Sbjct: 287 VYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWN 346
Query: 178 PISPDIILSGSYDHTVKLYDCRSNETIMTVNH-GSPV 213
P ++IL+GS D+TV+L+D R +T N GSP+
Sbjct: 347 PHDDNLILTGSADNTVRLFDRRK----LTANGVGSPI 379
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 36.3 bits (80), Expect = 0.050
Identities = 21/112 (18%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Query: 105 EAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANF 164
++ +++D+++ + +F GH V F+ + + S +D +WD+ + +
Sbjct: 151 DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYII 210
Query: 165 NEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMT-VNHGSPVES 215
H + + P + + S+D V ++ R + + V H S V S
Sbjct: 211 PAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVAS 262
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 36.3 bits (80), Expect = 0.050
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 227 SAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDV 281
SA EI +W++ K + + H TVT L + +++ L+S S DRH ++ +
Sbjct: 623 SASMAEIWLWEV-GTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSI 676
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 36.3 bits (80), Expect = 0.050
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 22/199 (11%)
Query: 141 IISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRS 200
I S S DK++ +W S + H D + A A S + + +GS D ++++ +
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVS--TNGTVYTGSADRRIRVWAKPT 265
Query: 201 NETIMTV-----NHGSPVESTLFLPSGGIFISAG-GTEIKVW---DIFNGGKLLSNISQH 251
E T+ H S V + G + S I VW D N + + H
Sbjct: 266 GEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGH 325
Query: 252 HKTVTTLRLASNNSRLMSASLDRHVKIY------DVSTFKVVHNIDFP-NAILSMAISEH 304
K + L L + + L+S S DR V+I+ S +V+ P ++ ++ E
Sbjct: 326 DKAI--LSLFNVSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKEL 383
Query: 305 DDILTV--GMMDGIISIRK 321
DD++++ G +DG + K
Sbjct: 384 DDVVSIISGSLDGEVKCWK 402
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 35.9 bits (79), Expect = 0.066
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 92 FRADGR-LLVAGIEEAAVKLFDVQSK-NVLRVFTGHTGPV-HRTFF--TKDQLK--IISY 144
F +GR +L +G + +++FDV K + +R+ HT + H T + D +++
Sbjct: 487 FACNGRKMLTSGADR--LQMFDVNRKASSVRLSPSHTQTLSHGTIYDVAVDPTSGLVVTV 544
Query: 145 SDDKSVGLWDISTEERIANF---NEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSN 201
DK + ++DI + + + +F +H D ++ P ++ S S + T+ D +
Sbjct: 545 GQDKKINIFDIESGKLVRSFKQDRDHGDPVKV-ILDPSCNYLVCSYS-NRTICFVDFVTG 602
Query: 202 ETI-MTVNHGSPVESTLFLPSGGIFIS-AGGTEIKVWDI 238
E + HG V +FLP IS A I VW +
Sbjct: 603 ELVAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVWKL 641
Score = 34.3 bits (75), Expect = 0.20
Identities = 20/113 (17%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 183 IILSGSYDHTVKLYDCRSN-ETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNG 241
++ SG + +YD + N + + +V + V S F +G +++G ++++D+
Sbjct: 451 LLASGGKGRAIHIYDVKRNFDPVGSVCGSAAVTSVKFACNGRKMLTSGADRLQMFDVNRK 510
Query: 242 GKLLSNISQH-----HKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHN 289
+ H H T+ + + + +++ D+ + I+D+ + K+V +
Sbjct: 511 ASSVRLSPSHTQTLSHGTIYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRS 563
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 35.9 bits (79), Expect = 0.066
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 198 CRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTT 257
C+S+ T++ H S S + A + V + +L ++ H K VT
Sbjct: 171 CKSSVTVLKFGHMS---------SDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTD 221
Query: 258 LRLASNNSRLMSASLDRHVKIYDVS 282
+SNN + S+SLD+ ++++++S
Sbjct: 222 FDFSSNNQYIASSSLDKTIRVWELS 246
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 113 VQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIS 156
++ +VL+ TGH+ V F+ + I S S DK++ +W++S
Sbjct: 203 LEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELS 246
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 35.5 bits (78), Expect = 0.088
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVH--RTFFTKDQLKIISYSDDKSVGLWDIS 156
+ AG + +++ DV S+ + + GH V+ RT K QL +I+ S D+SV LW++
Sbjct: 101 VAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQL-VITASKDESVRLWNVE 159
Query: 157 T 157
T
Sbjct: 160 T 160
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 35.5 bits (78), Expect = 0.088
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 4/136 (2%)
Query: 69 YDPVTKVVA-KNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQS-KNVLRVFTGHT 126
YD + +V + + E+ F DG+ +V + ++ DV++ V + H
Sbjct: 35 YDSDSSLVRERKVRAHKESCRAVRFIDDGQRIVTASADCSILATDVETGAQVAHLENAHE 94
Query: 127 GPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILS 186
V+ T + I S D V +WD FN H DYI + S ++++
Sbjct: 95 DAVN-TLINVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVT 153
Query: 187 GSYDHTVKLYDCRSNE 202
S D T+ + + R+++
Sbjct: 154 -SGDGTLSVCNLRTSK 168
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 35.5 bits (78), Expect = 0.088
Identities = 23/106 (21%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 185 LSGSYDHTVKLYDCRSNET-IMTVN-HGSPVESTLFLPSGG-IFISAGGTEIKVWDIFNG 241
++G+ H V+LYD + +++ + + + S P G I++ ++ +DI G
Sbjct: 232 VTGTKSHQVRLYDISTQRRPVLSFDFRETAITSIAEDPDGHTIYVGNASADLASFDIRTG 291
Query: 242 GKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVV 287
L S + + ++ ++ + + S LDR++++YDV T +++
Sbjct: 292 KLLGSFLGKCSGSIRSVVRHPQHQVIASCGLDRYLRVYDVKTRQLI 337
Score = 29.5 bits (63), Expect = 5.8
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 116 KNVLRVFTGHTGPVHRTFFTKDQ-LKIISYSDDKSVGLWDISTEER-IANFNEHTDYIRA 173
KN L +FT T TF +KD K ++ + V L+DIST+ R + +F+ I +
Sbjct: 206 KNNLGIFTP-TWFTSATFLSKDDHRKFVTGTKSHQVRLYDISTQRRPVLSFDFRETAITS 264
Query: 174 GAASPISPDIILSGSYDHTVKLYDCRSNETIMTV--NHGSPVESTLFLPSGGIFISAG-G 230
A P I + G+ + +D R+ + + + + S + P + S G
Sbjct: 265 IAEDPDGHTIYV-GNASADLASFDIRTGKLLGSFLGKCSGSIRSVVRHPQHQVIASCGLD 323
Query: 231 TEIKVWDI 238
++V+D+
Sbjct: 324 RYLRVYDV 331
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 184 ILSGSYDHTVKLYDCRS-NETIMTV-----NHGSPVESTLFLPSGGIFIS-AGGTEIKVW 236
+LSGSYD+TV++YD + N + + + G V S + P+ G F+ G + K++
Sbjct: 192 VLSGSYDYTVRMYDFQGMNSRLQSFRQIEPSEGHQVRSVSWSPTSGQFLCVTGSAQAKIF 251
Query: 237 D 237
D
Sbjct: 252 D 252
Score = 29.9 bits (64), Expect = 4.4
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 104 EEAAVKLFDVQS----KNVLRVFTGHTG--PVHRTFFTKDQLKIISYSDDKSVGLWDIS- 156
E+ +++++DV + V++ G PV + +D +I D S+ +W +
Sbjct: 299 EDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWSLKP 358
Query: 157 ---TEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSP 212
+ I HTD I + S I+LS S+D ++K++D R + + V G P
Sbjct: 359 GWGSRPDIYVGKAHTDDITSVKFSS-DGRILLSRSFDGSLKVWDLRQMKEALKVFEGLP 416
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 34.7 bits (76), Expect = 0.15
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 91 CFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYS-DDKS 149
C DG++LV + +K F+ ++ FTGH G V FT+D ++S + ++
Sbjct: 165 CVSPDGKILVTASTQ--LKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKYVLSSAVGERY 222
Query: 150 VGLW 153
+ +W
Sbjct: 223 IAVW 226
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 34.7 bits (76), Expect = 0.15
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 92 FRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSV 150
F A+G +L++G ++ V L+D Q NV F H+G + F Q K + +SDD+++
Sbjct: 67 FNAEGDVLISGSDDRRVVLWDWQLGNVKLSF--HSGHANNVF----QAKFMPFSDDRTI 119
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 34.3 bits (75), Expect = 0.20
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 96 GRLLVAGIEEAAVKLFDVQSK-NVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
G + G + ++D++ + L V GHT V F D I++ S D S+ WD
Sbjct: 225 GSSIAVGCADRNAYVYDIRRLVDPLIVLDGHTKTVTYARFM-DSHTIVTGSTDGSLKQWD 283
Query: 155 ISTEERIAN-FNEHTDYIR-AGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHG 210
I R+ + H + G + +++SGS ++ V +YD R E + G
Sbjct: 284 IDNGRRVVRTYRGHVNSRNFVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPVWVCGLG 341
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 34.3 bits (75), Expect = 0.20
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 14/183 (7%)
Query: 105 EAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD-ISTEERIAN 163
E VK D+ K GH G V+ F ++S SDD+ + LW+ +S +++
Sbjct: 39 EGRVKKLDLYGK-----LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSY 93
Query: 164 FNEHTDYIRAGAASPISPD--IILSGSYDHTVKLYDCRSN---ETIMTVNHGSPVESTLF 218
+ H + + P + D II SG+ D V+L N ET H V
Sbjct: 94 PSGHCENVFQTKFIPFTDDRTIITSGA-DGQVRLGQILENGKVETKRLGRHHGRVYKLAV 152
Query: 219 LPSG-GIFISAGGTE-IKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHV 276
LP +F S G ++ +DI + + S +S+ RL S ++D
Sbjct: 153 LPGDPNVFYSCGEDGFVQHFDIRSNSATMVLYSSPFTQGCRRHHSSSRIRLNSIAIDPRN 212
Query: 277 KIY 279
Y
Sbjct: 213 SYY 215
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 34.3 bits (75), Expect = 0.20
Identities = 25/122 (20%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 165 NEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLF--LPSG 222
N H I + PI + ++GS+DH +K++D + + ++ V T +
Sbjct: 100 NGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMS 159
Query: 223 GIFISAG--GTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNS-RLMSASLDRHVKIY 279
I+AG ++++ DI +G +S H V ++ ++++ L + D ++ +
Sbjct: 160 HTLIAAGTEDVQVRLCDIASGA-FSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFW 218
Query: 280 DV 281
D+
Sbjct: 219 DI 220
Score = 34.3 bits (75), Expect = 0.20
Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 4/140 (2%)
Query: 101 AGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI-STEE 159
A +E++ K + L T H G V T D + ++S D + LWDI S
Sbjct: 287 ASVEKSRQKRIHPGMLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRN 346
Query: 160 RIANFNEHTDYIRAGAASPISPD-IILSGSYDHTVKLYDCRSNE-TIMTVNHGSPVESTL 217
+ NF G S D ++ TVK + S T+M H V +
Sbjct: 347 TLVNFETGRIQTNKGIQLDTSDDPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVNTCC 406
Query: 218 FLPSG-GIFISAGGTEIKVW 236
F + ++ S +I VW
Sbjct: 407 FNSNDQELYTSGSDRQILVW 426
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 34.3 bits (75), Expect = 0.20
Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 82 KFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNV-----LRVFTGHTGPVHRTFFT- 135
+F A+G L+ G+ + + L++ S +R + H GPV F
Sbjct: 66 RFNRLAWGSYGSGSDGLIAGGLVDGNIGLWNPISSESGEIAHVRDLSKHKGPVRGLEFNV 125
Query: 136 KDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPIS-----PDIILSGSYD 190
K ++ S +DD +V +WD++ + +++ + T S +S ++ S S++
Sbjct: 126 KSPNQLASGADDGTVCIWDLANPSKPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHN 185
Query: 191 HTVKLYDCRSNETIMT 206
T ++D +NE I+T
Sbjct: 186 GTTVIWDV-NNEKIIT 200
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 33.9 bits (74), Expect = 0.27
Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 25/180 (13%)
Query: 94 ADGRLLVAGIEEAAVKLFDVQSKNVLRV---------------FTGHTGPVHRTFFTKDQ 138
+DGR L G + V L+D++++ ++V FTGH G V F +
Sbjct: 216 SDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCAFTGHCGIVSSLCFREGT 275
Query: 139 LKIISYSDDKSVGLWDISTEERIAN-FNEHTDYIRAGAASPISPDIILSGSYDHTVKLYD 197
++ S S D ++ +W+ I + F ++ + A + + +LS D T++LY
Sbjct: 276 AELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDA---LGRERVLSVGRDRTMQLYK 332
Query: 198 C-----RSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHH 252
S I + S E F+ S + I +W I + + HH
Sbjct: 333 VGIVVPESTRLIYRASE-SNFECCCFVNSDEFLSGSDNGSIALWSILKKKPVFIVNNAHH 391
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 33.9 bits (74), Expect = 0.27
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 98 LLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLK------IISYSDDKSVG 151
+L++G + ++++D++S NV+ + H PV + + K +S DD V
Sbjct: 551 VLISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILSPAPTKRPWSKCFLSVGDDSCVA 610
Query: 152 LWDISTEERIANFNEHTDY 170
L + T F H +Y
Sbjct: 611 LSSLETLRVERMFPGHPNY 629
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 33.5 bits (73), Expect = 0.35
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 91 CFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGH 125
C+R DG+ + G+E+ + L DV++ +LR H
Sbjct: 71 CWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPH 105
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 33.5 bits (73), Expect = 0.35
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 94 ADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLW 153
+DG ++ G + ++KL L GH PV + D +++ S D +V LW
Sbjct: 2636 SDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLW 2695
Query: 154 DI 155
I
Sbjct: 2696 RI 2697
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 33.1 bits (72), Expect = 0.47
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFT---GHTGPVHRTFFTKD--QLKIISYSDDKS 149
DG + + ++L+ N LR T H G V+ F QL +I+ DDK
Sbjct: 418 DGNFIGVAFTKHLIQLYAFSGPNDLRQHTEIDAHVGAVNDLAFANPNRQLCVITCGDDKL 477
Query: 150 VGLWDIS 156
+ +WD+S
Sbjct: 478 IKVWDVS 484
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/66 (21%), Positives = 30/66 (45%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWD 154
D ++ G+E++ + +++V+ V GH + F+ ++S D + W
Sbjct: 873 DNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWS 932
Query: 155 ISTEER 160
I T E+
Sbjct: 933 IDTWEK 938
>At4g31160.1 68417.m04423 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343
Length = 1846
Score = 32.7 bits (71), Expect = 0.62
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVH--RTFFTKDQLKIISYSDDKSVGLWDIS 156
+ G +K+F+ S ++L +GH PV + + ++D ++S S V LWD S
Sbjct: 1444 IAVGSHAGEIKIFEASSGSMLESVSGHQAPVTLVQPYVSRDTQLLLS-SSSSDVQLWDAS 1502
Query: 157 T 157
+
Sbjct: 1503 S 1503
>At4g14310.2 68417.m02205 peroxisomal membrane protein-related
contains weak similarity to Peroxisomal membrane protein
2 (22 kDa peroxisomal membrane protein)
(Swiss-Prot:P42925) [Mus musculus]
Length = 965
Score = 32.7 bits (71), Expect = 0.62
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 178 PISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPV-----ESTLFLPSGGIFISAGGTE 232
P P I +GS+ VK++D R E IM +PV S L + G + A
Sbjct: 683 PCGPLIASTGSFQSIVKVFDIRDGEQIMKWGVQNPVSALDYSSPLQWRNRGKLVIAETEA 742
Query: 233 IKVWDI 238
I VWD+
Sbjct: 743 ISVWDV 748
>At4g14310.1 68417.m02204 peroxisomal membrane protein-related
contains weak similarity to Peroxisomal membrane protein
2 (22 kDa peroxisomal membrane protein)
(Swiss-Prot:P42925) [Mus musculus]
Length = 1087
Score = 32.7 bits (71), Expect = 0.62
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 178 PISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPV-----ESTLFLPSGGIFISAGGTE 232
P P I +GS+ VK++D R E IM +PV S L + G + A
Sbjct: 656 PCGPLIASTGSFQSIVKVFDIRDGEQIMKWGVQNPVSALDYSSPLQWRNRGKLVIAETEA 715
Query: 233 IKVWDI 238
I VWD+
Sbjct: 716 ISVWDV 721
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 32.7 bits (71), Expect = 0.62
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 124 GHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI---STEERIANFNEHTDYIRAGAASPIS 180
GH V + + + S DKSV +W++ + + A HT ++ P +
Sbjct: 116 GHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHP-T 174
Query: 181 PDIILSGSYDHTVKLY----DCRSNETIMTV-----NHGSPVESTLFLPSGGIFIS-AGG 230
D++ S SYD+T+K++ D + + T+ H S V S F +G ++ +
Sbjct: 175 MDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDD 234
Query: 231 TEIKVW 236
+K+W
Sbjct: 235 LTLKIW 240
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 32.7 bits (71), Expect = 0.62
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 125 HTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDII 184
H PV + + D + S DK +W + + + H I A A P +++
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIP-GMNLL 129
Query: 185 LSGSYDHTVKLYDCRSNETIMT 206
+GS+D T+K +D R + T
Sbjct: 130 ATGSWDKTLKYWDTRQQNPVHT 151
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 32.3 bits (70), Expect = 0.82
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 99 LVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDI 155
+ AG +LFD++ + + H G V + + L ++S S DK++ +WD+
Sbjct: 427 IAAGFSSGQCRLFDLRENGFISSWRAHDGYVTKLVAPESHL-LVSSSLDKTLRIWDL 482
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 32.3 bits (70), Expect = 0.82
Identities = 16/80 (20%), Positives = 35/80 (43%)
Query: 76 VAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFT 135
+ K I+ G R DG++ + +++++ + N L + H + ++
Sbjct: 300 IRKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYS 359
Query: 136 KDQLKIISYSDDKSVGLWDI 155
D + S S+D +V LW +
Sbjct: 360 PDCELMASASEDATVALWKL 379
>At2g39640.1 68415.m04860 glycosyl hydrolase family 17 protein
Length = 549
Score = 32.3 bits (70), Expect = 0.82
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 182 DIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNG 241
D I + + +VK+YD +N I+ GS + T+ +P+G I + W N
Sbjct: 48 DFIKTKTTFDSVKIYD--ANPDILRAFAGSEINITIMVPNGNIPAMVNVANARQWVAANV 105
Query: 242 GKLLSNISQHHKTVTTLRLASNNSRLMS 269
I + V LASN++ L+S
Sbjct: 106 LPFQQQIKFKYVCVGNEILASNDNNLIS 133
>At4g15740.1 68417.m02396 C2 domain-containing protein similar to
cold-regulated gene SRC2 [Glycine max] GI:2055230;
contains Pfam profile PF00168: C2 domain
Length = 468
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 138 QLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVK--L 195
+LKI+S SD + D + + N T + A +PI D + +++HTVK +
Sbjct: 42 ELKIVSASDVNHIDATDKMDVYAVVSINGDTTQQKQAAKTPIDYDGGSNPTWNHTVKFSV 101
Query: 196 YDCRSNETIMTV 207
+ +NE ++T+
Sbjct: 102 NEREANEGLLTI 113
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 112 DVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYI 171
DV++ + GHT V ++ D + S S D +V +W++ T H +
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLV 163
Query: 172 RAGAASPISPDIILSGSYDHTVKLY 196
+ PI I S S D TV ++
Sbjct: 164 KGVTWDPIG-SFIASQSDDKTVIIW 187
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 31.5 bits (68), Expect = 1.4
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 114 QSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRA 173
QS V + + H V ++ D +IS S D S +WD++ + H Y++
Sbjct: 41 QSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQG 100
Query: 174 GAASPISPDIILSGSYDHTVKLY 196
A P++ + S S D T ++Y
Sbjct: 101 VAWDPLA-KYVASLSSDRTCRIY 122
Score = 29.5 bits (63), Expect = 5.8
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 228 AGGTEIKVWDIF-----NGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVS 282
A G E+ +W + K+ ++S H K V L+ + +++ L+S S+D I+DV+
Sbjct: 24 ADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVN 83
Query: 283 TFKVVHNID 291
V +D
Sbjct: 84 KGSVHQILD 92
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/104 (20%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 68 VYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGIEEAAVKLFDVQS-KNVLRVFTGHT 126
+ DP T + +S ++ ++ + DG G ++ +++D+++ + V G+
Sbjct: 303 IVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNL 362
Query: 127 GPVHRTFFTKDQLKIISYSDDKSVGLWDIS----TEERIANFNE 166
G + +T D + V ++D+S TE+ I F E
Sbjct: 363 GAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFGE 406
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 31.5 bits (68), Expect = 1.4
Identities = 38/144 (26%), Positives = 57/144 (39%), Gaps = 11/144 (7%)
Query: 151 GLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSN----ETIMT 206
G + + + NF+ H D A SP + +LSG + L++ S + I
Sbjct: 206 GTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPF 265
Query: 207 VNHGSPVESTLFLPS-GGIFISAG-GTEIKVWDIFNGGKLLSNISQHHKTVTTL---RLA 261
H + VE + P+ +F S + VWDI G + H+ V + RLA
Sbjct: 266 AGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLA 325
Query: 262 SNNSRLMSASLDRHVKIYDVSTFK 285
S L S S D I D+ K
Sbjct: 326 S--CMLASGSDDGTFSIRDLRLIK 347
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/61 (21%), Positives = 32/61 (52%)
Query: 184 ILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGK 243
+ +GS D+T+K + + + T++ V STL + +G ++ + +++W + +
Sbjct: 600 VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNGVLYSGSWDGTVRLWSLSDNSL 659
Query: 244 L 244
L
Sbjct: 660 L 660
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 31.1 bits (67), Expect = 1.9
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 95 DGRLLVAGIEEAAVKLFDV-----QSKNVLRV---FTGHTGPVHRTFFTKDQLKIISYSD 146
DGR++V G E+ V ++ V + LR+ HT V ++ + I S SD
Sbjct: 3285 DGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIASSSD 3344
Query: 147 DKSVGLWDIST 157
D +V +WD+S+
Sbjct: 3345 DCTVIIWDLSS 3355
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 31.1 bits (67), Expect = 1.9
Identities = 30/152 (19%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 141 IISYSDDKSVGLWDIST--EERIAN----FNEHTDYIRAGAASPISPDIILSGSYDHTVK 194
++S S D+ + LWD+S ++++ N + H I + + ++ S D +
Sbjct: 184 LLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLV 243
Query: 195 LYDCRSNETIMTVN-HGSPVESTLFLPSGGIFISAGGTE--IKVWDIFNGGKLLSNISQH 251
++D R+N+ V H V F P ++ ++ + ++D+ L +S H
Sbjct: 244 IWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSH 303
Query: 252 HKTVTTLRLASNNSRLMSAS-LDRHVKIYDVS 282
V + N+ ++++S DR + ++D++
Sbjct: 304 EGEVFQVEWDPNHETVLASSGEDRRLMVWDLN 335
>At1g01510.1 68414.m00067 C-terminal binding protein (ANGUSTIFOLIA)
nearly identical to C-terminal binding protein
ANGUSTIFOLIA [Arabidopsis thaliana] GI:15408535;
contains Pfam profile PF02826: D-isomer specific
2-hydroxyacid dehydrogenase, NAD binding domain
Length = 636
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 141 IISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRS 200
II+Y + +VGL + ++ N +++ A + + L GS D +L +CR+
Sbjct: 553 IIAYRNKDTVGLRSFAAGGKLLQINRRMEFVFASHSFDVWESWSLEGSLDE-CRLVNCRN 611
Query: 201 NETIMTV 207
+ ++ V
Sbjct: 612 SSAVLDV 618
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 242 GKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYD 280
G L++++ +H V + +S++S +SAS D VK++D
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/119 (17%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 43 GAIDYLDFSPVEPYYFAATCSVRVQVYDPVT-KVVAKNISKFVEAAYGGCFRADGRLLVA 101
G++ + S + Y +A C +V +++ +T KV+ + + + D ++
Sbjct: 832 GSVPCIALSKNDSYVMSA-CGGKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAI 890
Query: 102 GIEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEER 160
G+E++++ +++V+ V GH + F+ ++S D + W + E+
Sbjct: 891 GMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFWTADSWEK 949
Score = 29.1 bits (62), Expect = 7.6
Identities = 36/199 (18%), Positives = 79/199 (39%), Gaps = 14/199 (7%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKNVLR--VFTGHTGPVHRTFFT--KDQLKIISYSDDKSV 150
DG LL + + ++ Q ++ + H G V+ F Q+ +++ DDK +
Sbjct: 420 DGNLLGVSFTKHLIHVYAYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLI 479
Query: 151 GLWDISTEERIANFNEHTDYIRAGAA-SPISPDIILSGSYDHTVK--LYDCRSNETIMTV 207
+WD+S +++ F H + + + I S + D +K LYD +
Sbjct: 480 KVWDLS-GKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIKAWLYD-NVGSRVDYD 537
Query: 208 NHGSPVESTLFLPSGGIFISAGGTE-----IKVWDIFNGGKLLSNISQHHKTVTTLRLAS 262
G + L+ G S G ++ + W+ G + + K+ ++ +
Sbjct: 538 APGQWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNESEGALKRTYLGFRKKSAGVVQFDT 597
Query: 263 NNSRLMSASLDRHVKIYDV 281
+R ++ D +K +++
Sbjct: 598 TRNRFLAVGEDNQIKFWNM 616
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 30.7 bits (66), Expect = 2.5
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 6/102 (5%)
Query: 242 GKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAI 301
GK + N +T A S L S S + + ++D+ F+ V + P + + I
Sbjct: 419 GKTMENEMATSVQKSTSCFAVKGSYLFSTSGGK-IAVFDLKNFEKVASFGSPTPMATYFI 477
Query: 302 SEHDDILTVGMMDGII-----SIRKREEPVRQSEKRKNLLKF 338
D+L VG+ DG I S RK +E + +++ L F
Sbjct: 478 FIPGDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAF 519
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 166 EHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIF 225
EH D I A + II SGS+D T+K++ + + ++ + L G ++
Sbjct: 172 EHADSISCLA---VHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLVAGDGRVY 228
Query: 226 ISAGGTEIKVW 236
++ ++K+W
Sbjct: 229 SASADGKVKIW 239
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 30.3 bits (65), Expect = 3.3
Identities = 20/92 (21%), Positives = 41/92 (44%)
Query: 43 GAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAG 102
GAI+ + FS Y ++++D T+ + + + A + DG+ L+ G
Sbjct: 304 GAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTG 363
Query: 103 IEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFF 134
E+ V+++ ++ + V+ GH V F
Sbjct: 364 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 30.3 bits (65), Expect = 3.3
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 99 LVAGIEEAAVKLFDVQS-KNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDIST 157
+V + ++ DV++ V + H V+ T + I S D V +WD
Sbjct: 9 IVTASADCSILATDVETGAQVAHLENAHEDAVN-TLINVTETTIASGDDKGCVKIWDTRQ 67
Query: 158 EERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNE 202
FN H DYI + S ++++ S D T+ + + R+++
Sbjct: 68 RSCSHEFNAHEDYISGMTFASDSMKLVVT-SGDGTLSVCNLRTSK 111
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 30.3 bits (65), Expect = 3.3
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 183 IILSGSYDHTVKLYDCRSNETIMTV-NHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNG 241
+I SGS D TV ++D S + + + P+ + G ++A GT + VW I
Sbjct: 3394 MIASGSDDCTVIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTAAGTVLAVWSINGD 3453
Query: 242 GKLLSNISQ 250
++N SQ
Sbjct: 3454 CLAVANTSQ 3462
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 95 DGRLLVAGIEEAAVKLFDVQSKN--------VLRVFTGHTGPVHRTFFTKDQLKIISYSD 146
DGR++V G E+ V ++ V + + HT V ++ + I S SD
Sbjct: 3341 DGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSD 3400
Query: 147 DKSVGLWDIST 157
D +V +WD+S+
Sbjct: 3401 DCTVIIWDLSS 3411
>At4g07340.1 68417.m01128 replication protein-related contains
similarity to Xenopus laevis replication protein A1
(SW:RFA1_XENLA); contains non-consensus (GC) donor
splice site at intron 3
Length = 434
Score = 29.9 bits (64), Expect = 4.4
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 115 SKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAG 174
SK + + + G H + D + I +++ S G + IS+ FN +TD I+
Sbjct: 18 SKMQIPIRKHYIGKFHMSLKVGDWMIIDTFTLSPSYGKYKISSLSYRMGFNHNTDVIK-- 75
Query: 175 AASPISPDIILSGSYDHTVK 194
P+S + L +Y VK
Sbjct: 76 -CDPVSDSVFLDLAYFEGVK 94
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 29.1 bits (62), Expect = 7.6
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 95 DGRLLVAGIEEAAVKLFDV------QSKNVLRVFT--GHTGPVHRTFFTKDQLKIISYSD 146
+GR L A A VK++++ K V RV GH V F+ + +II+ S
Sbjct: 250 NGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASK 309
Query: 147 DKSVGLWDIS 156
D S+ +W+I+
Sbjct: 310 DGSIRVWNIN 319
>At2g03610.1 68415.m00321 F-box family protein contains F-box domain
Pfam:PF00646
Length = 216
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 260 LASNNSRLMSASLDRHVKIYDVS 282
+A NS+L +LD H+KIYD S
Sbjct: 76 MAYKNSKLYLYTLDHHIKIYDFS 98
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.136 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,631,891
Number of Sequences: 28952
Number of extensions: 481107
Number of successful extensions: 2218
Number of sequences better than 10.0: 216
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 1306
Number of HSP's gapped (non-prelim): 680
length of query: 527
length of database: 12,070,560
effective HSP length: 84
effective length of query: 443
effective length of database: 9,638,592
effective search space: 4269896256
effective search space used: 4269896256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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