Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001508-TA|BGIBMGA001508-PA|IPR000734|Lipase,
IPR013818|Lipase, N-terminal
(329 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0224 - 5984128-5984923,5985667-5986718,5986800-5987776,598... 33 0.24
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 31 1.3
12_02_0996 - 25115643-25115708,25115869-25116107,25116484-251165... 30 3.0
11_06_0426 - 23372520-23372624,23372709-23372914,23373516-23373600 29 3.9
09_01_0055 - 907719-907748,907757-907824,908972-909098 29 5.2
08_02_0096 - 12296913-12296951,12297205-12297282,12297335-122973... 29 5.2
01_06_0161 + 27108920-27109279,27109479-27109598,27110301-271104... 29 6.8
02_04_0555 - 23840634-23841035,23841388-23841501,23841742-238418... 28 9.0
>09_02_0224 - 5984128-5984923,5985667-5986718,5986800-5987776,
5988427-5989228,5990966-5991016,5992391-5993464,
5994458-5994706
Length = 1666
Score = 33.5 bits (73), Expect = 0.24
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 148 ATAARGVPAVGRGLG--QFLTFLNRVTGAPFNTMH---LVGFSLGAHLVGNAGRLDPAGP 202
AT +G P VG L QF F+ N + + GAHL +AG L PA
Sbjct: 1201 ATPPKGGPLVGGSLPCPQFRPFIMEHVAQGLNALEPSFMNATQAGAHLNSSAGTLQPA-- 1258
Query: 203 LWNTNSNRLNARDGV 217
N+NR+NA G+
Sbjct: 1259 ---PNANRVNATQGI 1270
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/21 (66%), Positives = 16/21 (76%)
Query: 220 EAIHTDGSTTGLGIGSAVANA 240
EAI TDGS+T G GS+V NA
Sbjct: 346 EAIGTDGSSTSCGTGSSVTNA 366
>12_02_0996 -
25115643-25115708,25115869-25116107,25116484-25116577,
25116726-25116864,25116960-25117081,25117261-25117491,
25117583-25117644,25118335-25118461,25118890-25119183,
25119266-25119622
Length = 576
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 262 RAWELFASTVTRNHLVGNQCSNMLQVSSNSCRGNRLNMGNDDLRKSGQIRTLQSEHRPEI 321
RA + AS ++ H G Q S++S R + N N L++ G+ R +QSE + ++
Sbjct: 500 RARQNAASQQSQLHEKGRQIDRSAVHSNHSYRKEQDNYSNPQLQEKGKCRKVQSEQQVKL 559
>11_06_0426 - 23372520-23372624,23372709-23372914,23373516-23373600
Length = 131
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 155 PAVGRGLGQFLTFLNRVTGAPFNTMHLVGFSLGAHLVGNAGRLDPAGPL 203
P G G G +L+R+ F+T +V S G LV N G PA L
Sbjct: 60 PGGGTGAGAADVWLSRLAMVSFSTAVVVEVSTGEGLVANLGVATPAPTL 108
>09_01_0055 - 907719-907748,907757-907824,908972-909098
Length = 74
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 44 LHTVDLEATPDYELLDEINRNPANNQYLLFTRRNRRSSQTLTINNANSVTRSNFNANNPT 103
+HT + Y +L + NP NQ LF + S +L + N++ N ++
Sbjct: 8 VHTASSKQAGPY-MLHYYSHNPQENQNKLFATKISTSLTSLLVEVENNLRPRNNCGDSDV 66
Query: 104 VVIAHGWL 111
+++ HG L
Sbjct: 67 LLVEHGLL 74
>08_02_0096 -
12296913-12296951,12297205-12297282,12297335-12297345,
12298140-12299044,12299074-12299243
Length = 400
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 97 FNANNPTVVIAHGWLSNQNTDINPTIRDAY 126
F N +I + W +N + I+P IRD Y
Sbjct: 220 FTLRNENAIIKYNWAANCLSKIDPPIRDVY 249
>01_06_0161 +
27108920-27109279,27109479-27109598,27110301-27110438,
27110680-27110784,27110883-27111051,27111507-27111583,
27111796-27111840,27111984-27112022,27112374-27112457,
27112846-27112884,27112963-27113025,27113109-27113238,
27113319-27113374
Length = 474
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 18 AVPVQEDSFRKGNYPRYIEMPDGDGNLHTVDLEATPDYELLDEINRNPANNQY 70
AV V E +F KG E+ DG G + TV TP+++ +IN N Y
Sbjct: 403 AVLVGEKTFGKGLIQSVFELHDGSGIVVTVGKYVTPNHK---DINGNGIEPDY 452
>02_04_0555 -
23840634-23841035,23841388-23841501,23841742-23841844,
23842415-23842467,23842544-23842644,23842702-23842879,
23842998-23843120,23843515-23843656,23843854-23843959,
23844236-23844305,23844430-23844588,23845229-23845329,
23845410-23845503
Length = 581
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 293 RGNRLNMGN--DD---LRKSGQIRTLQSEHRPEISLLSYRI 328
RGN++ +GN D L K+GQ L ++H+P + L RI
Sbjct: 244 RGNQITVGNVGDSRCVLSKNGQAIDLSTDHKPNVPLERQRI 284
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,386,804
Number of Sequences: 37544
Number of extensions: 461925
Number of successful extensions: 956
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 952
Number of HSP's gapped (non-prelim): 8
length of query: 329
length of database: 14,793,348
effective HSP length: 82
effective length of query: 247
effective length of database: 11,714,740
effective search space: 2893540780
effective search space used: 2893540780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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