Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001507-TA|BGIBMGA001507-PA|IPR000734|Lipase,
IPR013818|Lipase, N-terminal
(342 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 0.41
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 28 2.2
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 2.9
SPAC4F10.18 |||WD repeat protein, human NUP37 family|Schizosacch... 27 3.9
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 27 3.9
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 27 5.1
SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 5.1
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 26 6.8
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 26 8.9
SPBP23A10.16 |sdh4|tim18|TIM22 inner membrane protein import com... 26 8.9
>SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 30.3 bits (65), Expect = 0.41
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 103 NFNRNVPTVVVAHGWLSNQKTKLNGVLRDVYLKKSNVNVIILD 145
+F V VV +GW + K K + +LRD + KK+N+ +LD
Sbjct: 423 DFALKVVGAVVDYGW-TFPKPKFSDILRDYWGKKANLPTALLD 464
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 27.9 bits (59), Expect = 2.2
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 17 TSHVGIVTVASAVPVPQEEAKYSRYIQFPDGD-GILQNVDLEAKPNMQLLNEVERNPANN 75
T + IV+ S P + + S Q P+ D I N + N + N P ++
Sbjct: 287 TDSLSIVSNPSQTPAKFDSNRIS---QVPNSDYSIYSNFN-----NFPIANHAPSFPQSS 338
Query: 76 IYLLYTRRNPTSPQTLVMNNANSITSSNFNRNVPT 110
+ L + +PTS T N+A+S S+++ N T
Sbjct: 339 VKKLDSSFSPTSLPTFTTNSASSGLSTSYTNNNDT 373
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 27.5 bits (58), Expect = 2.9
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 4/94 (4%)
Query: 45 PDGDGILQNVDLEAKPNMQLLNEVERNPANNIYLLYTRRNPTSPQTLVMNNANSITSSNF 104
PDG+ L + A N+ + + P N+ Y R P P L N S
Sbjct: 288 PDGNNALPMDNTHA--NISYMQSSQSMPVNSYS--YDRYTPNQPSYLESKPGNHQPSYTS 343
Query: 105 NRNVPTVVVAHGWLSNQKTKLNGVLRDVYLKKSN 138
+ + + +SN T +NG+ + Y SN
Sbjct: 344 EQPMYSTASVPQQISNGPTAVNGLPMNSYTPHSN 377
>SPAC4F10.18 |||WD repeat protein, human NUP37
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 27.1 bits (57), Expect = 3.9
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 261 DFFPN-GGVSQPGCLLNVCNHNRAWEYFSATVSYNHLVGNQCDNTNQISSNN 311
+ PN G+S LL C H R +YF+ S + L+ Q NT + SN+
Sbjct: 302 NLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLI--QLINTYEKDSNS 351
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/62 (17%), Positives = 28/62 (45%)
Query: 45 PDGDGILQNVDLEAKPNMQLLNEVERNPANNIYLLYTRRNPTSPQTLVMNNANSITSSNF 104
P D + + L + + LNE+ N +L+ + + +++ + ++T +NF
Sbjct: 416 PSDDDFMHALSLSTNSDGETLNEINTNNPEREHLIVRLKVDSQKLKIIVEQSQTLTLNNF 475
Query: 105 NR 106
+
Sbjct: 476 QQ 477
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 118 LSNQKTKLNGVLRDVYLKKSNVNVIILDWRRLAIS 152
L++Q T + G + D+ L V++II +W A++
Sbjct: 302 LADQITFIRGKIEDISLPVGKVDIIISEWMGYALT 336
>SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 313
Score = 26.6 bits (56), Expect = 5.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 45 PDGDGILQNVDLEAKPNMQLLNEVERNPANNIYLLYTRRNPTSPQTLVM-----NNANSI 99
P G + + L + + L+N + + + Y R P+SP TL + N A I
Sbjct: 43 PFGFSSTKGIRLSSINSNDLVNTLSKGFNETSNMSYNRILPSSPPTLEIGEIDYNEALQI 102
Query: 100 TSSNFN-RNVPTVVVA 114
S++ N ++VPTV +A
Sbjct: 103 RSADENQQSVPTVSIA 118
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 26.2 bits (55), Expect = 6.8
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 15 KVTSHVGIVTVASAVPVPQEEAKYSRYIQFPDGDGILQNVDLEAKPNMQLLNEVERNPAN 74
K S G++ S+V P++ Y R ++ P I + VDL+ + E +P+
Sbjct: 902 KPNSQEGLILFESSVHKPEDTEFYVRRLRIPVSLNISKRVDLK---QWSAFMDTEGDPSY 958
Query: 75 NIYLLYTRRNPTSPQTLVMNNANS 98
+ LL + + P + + A++
Sbjct: 959 CLVLLNFYNHFSEPLFVTVKTAST 982
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 179 TGAPFNSMHLIGFSLGAHLVANAGRE 204
TG ++ +IG SLG H + N G+E
Sbjct: 105 TGVISGALVVIGTSLGGHELTNGGKE 130
>SPBP23A10.16 |sdh4|tim18|TIM22 inner membrane protein import
complex anchor subunit Tim18|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 186
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 96 ANSITSSNFNRNVPTVVVAHGWLSNQ--KTKLN-GVLR 130
AN++ + + N N PT + W +N +T+L G LR
Sbjct: 2 ANNVDTRSANTNSPTTTTSFSWFTNNMLQTRLGLGALR 39
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.135 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,587,551
Number of Sequences: 5004
Number of extensions: 66839
Number of successful extensions: 140
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 136
Number of HSP's gapped (non-prelim): 10
length of query: 342
length of database: 2,362,478
effective HSP length: 73
effective length of query: 269
effective length of database: 1,997,186
effective search space: 537243034
effective search space used: 537243034
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
- SilkBase 1999-2023 -