GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001506-TA|BGIBMGA001506-PA|IPR013818|Lipase, N-terminal,
IPR000734|Lipase, IPR002035|von Willebrand factor, type A
         (293 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              27   0.15 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   4.2  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   4.2  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   4.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.6  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 186 GLDPAGPLWNTNSNRLRP-GDGVYV--EAIHTDGSTSGLGI 223
           G  P G LWN N+ RL P  D  Y   E I  +G  S L I
Sbjct: 802 GEKPIGILWNMNNKRLDPKSDSRYTIREEILANGVLSDLSI 842



 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 254  GNYLLLRLHTTTWSALNATIWHKLRLTLAVEDALTWAMT 292
            GN+++L L   TW  L  T  +     +A  +  T  +T
Sbjct: 1517 GNFVVLDLVPATWYHLRVTAHNNAGFAVAEYEFATLTVT 1555


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 16/47 (34%), Positives = 23/47 (48%)

Query: 238 NSQPGCSTSLCTTIELGNYLLLRLHTTTWSALNATIWHKLRLTLAVE 284
           N+QP CS  L T     + LL ++      A+NAT       +LAV+
Sbjct: 145 NTQPMCSPKLLTFDLTTSQLLKQVEIPHDVAVNATTGKGRLSSLAVQ 191


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 16/47 (34%), Positives = 23/47 (48%)

Query: 238 NSQPGCSTSLCTTIELGNYLLLRLHTTTWSALNATIWHKLRLTLAVE 284
           N+QP CS  L T     + LL ++      A+NAT       +LAV+
Sbjct: 145 NTQPMCSPKLLTFDLTTSQLLKQVEIPHDVAVNATTGKGRLSSLAVQ 191


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 16/47 (34%), Positives = 23/47 (48%)

Query: 238 NSQPGCSTSLCTTIELGNYLLLRLHTTTWSALNATIWHKLRLTLAVE 284
           N+QP CS  L T     + LL ++      A+NAT       +LAV+
Sbjct: 145 NTQPMCSPKLLTFDLTTSQLLKQVEIPHDVAVNATTGKGRLSSLAVQ 191


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/24 (41%), Positives = 11/24 (45%)

Query: 82  TVVIVHGWLSTRNTEPNPTIRNAF 105
           T  IV  WL   N+  NP I   F
Sbjct: 657 TAFIVTSWLGYMNSFVNPVIYTVF 680


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.134    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,940
Number of Sequences: 429
Number of extensions: 2970
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 6
length of query: 293
length of database: 140,377
effective HSP length: 57
effective length of query: 236
effective length of database: 115,924
effective search space: 27358064
effective search space used: 27358064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)