Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001505-TA|BGIBMGA001505-PA|undefined
         (193 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X77794-1|CAA54821.1|  249|Homo sapiens cyclin G1 protein.              33   0.63 
U53328-1|AAB03903.1|  256|Homo sapiens cyclin G protein.               33   0.63 
U47413-1|AAC50688.1|  295|Homo sapiens cyclin G1 protein.              33   0.63 
L49504-1|AAC41977.1|  295|Homo sapiens cyclin G1 protein.              33   0.63 
D86077-1|BAA13007.1|  279|Homo sapiens cyclin G protein.               33   0.63 
D78341-1|BAA11353.1|  295|Homo sapiens cyclin G protein.               33   0.63 
BT007134-1|AAP35798.1|  295|Homo sapiens cyclin G1 protein.            33   0.63 
BC007093-1|AAH07093.1|  295|Homo sapiens cyclin G1 protein.            33   0.63 
BC000196-1|AAH00196.1|  295|Homo sapiens cyclin G1 protein.            33   0.63 
AY791292-1|AAV40836.1|  295|Homo sapiens cyclin G1 protein.            33   0.63 
AK000703-1|BAA91330.1|  993|Homo sapiens protein ( Homo sapiens ...    30   4.5  
AB046771-1|BAB13377.1| 1249|Homo sapiens KIAA1551 protein protein.     30   4.5  

>X77794-1|CAA54821.1|  249|Homo sapiens cyclin G1 protein.
          Length = 249

 Score = 33.1 bits (72), Expect = 0.63
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 8/57 (14%)

Query: 54  RMSSENFLEL-TQLAPCICIGVLS-------VLKILALTAKRQKIYELTQNLECLHK 102
           R +S NF  L  QL  C C  + S        L I+AL  + QK  ELT+ +ECL K
Sbjct: 127 RRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQK 183


>U53328-1|AAB03903.1|  256|Homo sapiens cyclin G protein.
          Length = 256

 Score = 33.1 bits (72), Expect = 0.63
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 8/57 (14%)

Query: 54  RMSSENFLEL-TQLAPCICIGVLS-------VLKILALTAKRQKIYELTQNLECLHK 102
           R +S NF  L  QL  C C  + S        L I+AL  + QK  ELT+ +ECL K
Sbjct: 127 RRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQK 183


>U47413-1|AAC50688.1|  295|Homo sapiens cyclin G1 protein.
          Length = 295

 Score = 33.1 bits (72), Expect = 0.63
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 8/57 (14%)

Query: 54  RMSSENFLEL-TQLAPCICIGVLS-------VLKILALTAKRQKIYELTQNLECLHK 102
           R +S NF  L  QL  C C  + S        L I+AL  + QK  ELT+ +ECL K
Sbjct: 173 RRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQK 229


>L49504-1|AAC41977.1|  295|Homo sapiens cyclin G1 protein.
          Length = 295

 Score = 33.1 bits (72), Expect = 0.63
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 8/57 (14%)

Query: 54  RMSSENFLEL-TQLAPCICIGVLS-------VLKILALTAKRQKIYELTQNLECLHK 102
           R +S NF  L  QL  C C  + S        L I+AL  + QK  ELT+ +ECL K
Sbjct: 173 RRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQK 229


>D86077-1|BAA13007.1|  279|Homo sapiens cyclin G protein.
          Length = 279

 Score = 33.1 bits (72), Expect = 0.63
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 8/57 (14%)

Query: 54  RMSSENFLEL-TQLAPCICIGVLS-------VLKILALTAKRQKIYELTQNLECLHK 102
           R +S NF  L  QL  C C  + S        L I+AL  + QK  ELT+ +ECL K
Sbjct: 173 RRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQK 229


>D78341-1|BAA11353.1|  295|Homo sapiens cyclin G protein.
          Length = 295

 Score = 33.1 bits (72), Expect = 0.63
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 8/57 (14%)

Query: 54  RMSSENFLEL-TQLAPCICIGVLS-------VLKILALTAKRQKIYELTQNLECLHK 102
           R +S NF  L  QL  C C  + S        L I+AL  + QK  ELT+ +ECL K
Sbjct: 173 RRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQK 229


>BT007134-1|AAP35798.1|  295|Homo sapiens cyclin G1 protein.
          Length = 295

 Score = 33.1 bits (72), Expect = 0.63
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 8/57 (14%)

Query: 54  RMSSENFLEL-TQLAPCICIGVLS-------VLKILALTAKRQKIYELTQNLECLHK 102
           R +S NF  L  QL  C C  + S        L I+AL  + QK  ELT+ +ECL K
Sbjct: 173 RRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQK 229


>BC007093-1|AAH07093.1|  295|Homo sapiens cyclin G1 protein.
          Length = 295

 Score = 33.1 bits (72), Expect = 0.63
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 8/57 (14%)

Query: 54  RMSSENFLEL-TQLAPCICIGVLS-------VLKILALTAKRQKIYELTQNLECLHK 102
           R +S NF  L  QL  C C  + S        L I+AL  + QK  ELT+ +ECL K
Sbjct: 173 RRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQK 229


>BC000196-1|AAH00196.1|  295|Homo sapiens cyclin G1 protein.
          Length = 295

 Score = 33.1 bits (72), Expect = 0.63
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 8/57 (14%)

Query: 54  RMSSENFLEL-TQLAPCICIGVLS-------VLKILALTAKRQKIYELTQNLECLHK 102
           R +S NF  L  QL  C C  + S        L I+AL  + QK  ELT+ +ECL K
Sbjct: 173 RRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQK 229


>AY791292-1|AAV40836.1|  295|Homo sapiens cyclin G1 protein.
          Length = 295

 Score = 33.1 bits (72), Expect = 0.63
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 8/57 (14%)

Query: 54  RMSSENFLEL-TQLAPCICIGVLS-------VLKILALTAKRQKIYELTQNLECLHK 102
           R +S NF  L  QL  C C  + S        L I+AL  + QK  ELT+ +ECL K
Sbjct: 173 RRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQK 229


>AK000703-1|BAA91330.1|  993|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20696 fis, clone KAIA2488. ).
          Length = 993

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)

Query: 49  AFFGSRMSSENFLELTQLAPCICIGVLSVLKILALTAKRQKIYELTQNLECLHKIILNDT 108
           A   +++SSEN  ++ Q +P +C   +SV K ++    + KI    QN   L   +L+  
Sbjct: 235 AVLNTQLSSENVTKVEQNSPAVC-ETISVPKSMSTEEYKSKI----QNENMLLLALLSQA 289

Query: 109 RKTE 112
           RKT+
Sbjct: 290 RKTQ 293


>AB046771-1|BAB13377.1| 1249|Homo sapiens KIAA1551 protein protein.
          Length = 1249

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)

Query: 49  AFFGSRMSSENFLELTQLAPCICIGVLSVLKILALTAKRQKIYELTQNLECLHKIILNDT 108
           A   +++SSEN  ++ Q +P +C   +SV K ++    + KI    QN   L   +L+  
Sbjct: 371 AVLNTQLSSENVTKVEQNSPAVC-ETISVPKSMSTEEYKSKI----QNENMLLLALLSQA 425

Query: 109 RKTE 112
           RKT+
Sbjct: 426 RKTQ 429


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.328    0.142    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,174,544
Number of Sequences: 224733
Number of extensions: 736030
Number of successful extensions: 1637
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1627
Number of HSP's gapped (non-prelim): 12
length of query: 193
length of database: 73,234,838
effective HSP length: 86
effective length of query: 107
effective length of database: 53,907,800
effective search space: 5768134600
effective search space used: 5768134600
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 63 (29.5 bits)