GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001505-TA|BGIBMGA001505-PA|undefined
         (193 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    27   0.37 
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    27   0.37 
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    27   0.49 
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    25   1.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   1.5  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   6.0  

>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 27.1 bits (57), Expect = 0.37
 Identities = 9/21 (42%), Positives = 15/21 (71%)

Query: 153 SSRIAEAAFLCKWYEMDQKSK 173
           SS + EAA+ C WY+  +++K
Sbjct: 411 SSSVMEAAYSCHWYDGSEEAK 431


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 27.1 bits (57), Expect = 0.37
 Identities = 9/21 (42%), Positives = 15/21 (71%)

Query: 153 SSRIAEAAFLCKWYEMDQKSK 173
           SS + EAA+ C WY+  +++K
Sbjct: 411 SSSVMEAAYSCHWYDGSEEAK 431


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 26.6 bits (56), Expect = 0.49
 Identities = 14/40 (35%), Positives = 23/40 (57%)

Query: 65  QLAPCICIGVLSVLKILALTAKRQKIYELTQNLECLHKII 104
           +L PCI + +LS+  I AL   +Q+  +LT     L +I+
Sbjct: 257 KLIPCIALTILSLRLIGALLEAKQRRSQLTGTATGLKQIV 296


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 8/21 (38%), Positives = 15/21 (71%)

Query: 153 SSRIAEAAFLCKWYEMDQKSK 173
           SS + +AA+ C WY+  +++K
Sbjct: 264 SSSVMKAAYSCHWYDGSEEAK 284


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 45  IEEIAFFGSRMSSENFLELTQLAPCICIGVLSVLKILALTAKRQKIYELTQNLECLHKII 104
           ++ IAFF +R SS +  + T+ A C         ++ AL + R       + L C ++ +
Sbjct: 29  LQSIAFFSTRRSSAHCTQQTRQASCSDNAAQLTYRLPAL-SNRHNDNATAEYLSCYYQNV 87

Query: 105 LNDTRKTE 112
                KT+
Sbjct: 88  RGLRTKTK 95


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 8/93 (8%)

Query: 60  FLELTQLAPCICIGVLSVLKILALTAKRQKI-------YELTQNLECLHKIILNDTRKTE 112
           F  +  + PC+ I  LSVL     +   +KI         LT     L +II   +    
Sbjct: 241 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVP 300

Query: 113 LVRKNLVLIKFITKYFFVLNAVLIFVYNFSSPV 145
           L+ K L+    +     V+   ++ V NF SPV
Sbjct: 301 LLGKYLLFTMMLVTLSVVVTIAVLNV-NFRSPV 332


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.328    0.142    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,476
Number of Sequences: 2123
Number of extensions: 5096
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 6
length of query: 193
length of database: 516,269
effective HSP length: 61
effective length of query: 132
effective length of database: 386,766
effective search space: 51053112
effective search space used: 51053112
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 46 (22.6 bits)