Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001504-TA|BGIBMGA001504-PA|IPR002557|Chitin binding
Peritrophin-A
(342 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 4e-14
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 5e-14
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 53 3e-07
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 3e-05
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 45 1e-04
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 42 0.001
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 40 0.002
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 40 0.002
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 36 0.036
SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 33 0.44
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 33 0.44
SB_725| Best HMM Match : Apolipoprotein (HMM E-Value=0.51) 32 0.59
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 29 4.1
SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19) 29 7.2
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 76.2 bits (179), Expect = 4e-14
Identities = 70/253 (27%), Positives = 91/253 (35%), Gaps = 21/253 (8%)
Query: 59 CTRFYKCAEGRPVAL-KCPPNLLFNPSNEQCDWPHNVECGDRTI-----PXXXXXXXXXX 112
C+RFY+C L +CP L ++ CDWP V+C DRT P
Sbjct: 1152 CSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWPRYVDC-DRTTSTPPTPTTKPECDLHC 1210
Query: 113 XXXXXXXXXXXXXXXXXHADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALI-C 171
+ T C EK + G C+RFY+C H L C
Sbjct: 1211 QTLSPDGSCTVAPGYAVVNGMCVDTYFCKEKPN-GHYADPRDCSRFYQCDAFHRAFLHRC 1269
Query: 172 PPNLLYNPNNEQCDWPHNVECGDRT--IPXXXXXXXXXXXXXXXXXXXXXXXXXXXHADP 229
P L ++ CDWP V+C DRT P P
Sbjct: 1270 PAGLKWSVKKTACDWPRYVDC-DRTTSTPPTPTPLTPTTKPACDLHCQTLNPDGSCTVAP 1328
Query: 230 --SLATEICAE----KD-SDGVLVAHEHCTRFYKCFDSHPVAL-ICPPNLLYNPNNEQCD 281
+ +C + KD G C+RFY+C SH L CP L ++ CD
Sbjct: 1329 GYEVVNGMCVDTTFCKDRPHGHYADPRDCSRFYQCDASHKTFLHRCPDGLKWSVKKTACD 1388
Query: 282 WPHNVECGDRTIP 294
P V+C DRTIP
Sbjct: 1389 LPLYVDC-DRTIP 1400
Score = 74.9 bits (176), Expect = 8e-14
Identities = 67/256 (26%), Positives = 93/256 (36%), Gaps = 26/256 (10%)
Query: 59 CTRFYKC-AEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDRT-IPXXXXXXXXXXXXXX 116
C+RFY+C A R +C P L ++ + CDWP NV+C +T P
Sbjct: 797 CSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNVDCDRKTPTPPSPTPPTTTPKPAC 856
Query: 117 XXXXXXXXXXXXXHADPS--------LATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVA 168
P + T C +K +G C++FY+C H
Sbjct: 857 DLHCQTLNPDGSCTVAPGYEVVNGMCVDTTFCKDK-PNGHYADPRDCSKFYQCDAFHRAF 915
Query: 169 L-ICPPNLLYNPNNEQCDWPHNVECGDRT--IPXXXXXXXXXXXXXXXXXXXXXXXXXXX 225
L CP L ++ CDWP V+C DRT P
Sbjct: 916 LHRCPAGLKWSVKKTACDWPRYVDC-DRTTSTPPTPTTHTPTIKPACDLHCQTLNLDGTC 974
Query: 226 HADPS--------LATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVAL-ICPPNLLYNPN 276
P+ + T C +K +G C+RFY+C H L CP L ++
Sbjct: 975 TVMPNYQVVNGMCVDTTFCKDK-PNGHYADPMDCSRFYQCDAFHRAFLHRCPAGLKWSVK 1033
Query: 277 NEQCDWPHNVECGDRT 292
CDWP V+C DRT
Sbjct: 1034 KTTCDWPRYVDC-DRT 1048
Score = 64.1 bits (149), Expect = 2e-10
Identities = 48/163 (29%), Positives = 62/163 (38%), Gaps = 11/163 (6%)
Query: 137 TEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALI-CPPNLLYNPNNEQCDWPHNVECGDR 195
T C +K + G C+RFY+C H L CP L ++ CDWP V+C DR
Sbjct: 1135 TTFCKDKPN-GHYADPRDCSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWPRYVDC-DR 1192
Query: 196 T-----IPXXXXXXXXXXXXXXXXXXXXXXXXXXXHADPSLATEICAEKDSDGVLVAHEH 250
T P + T C EK +G
Sbjct: 1193 TTSTPPTPTTKPECDLHCQTLSPDGSCTVAPGYAVVNGMCVDTYFCKEK-PNGHYADPRD 1251
Query: 251 CTRFYKCFDSHPVAL-ICPPNLLYNPNNEQCDWPHNVECGDRT 292
C+RFY+C H L CP L ++ CDWP V+C DRT
Sbjct: 1252 CSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDC-DRT 1293
Score = 61.3 bits (142), Expect = 1e-09
Identities = 46/167 (27%), Positives = 63/167 (37%), Gaps = 14/167 (8%)
Query: 137 TEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALI-CPPNLLYNPNNEQCDWPHNVECGDR 195
T C +K + G C+RFY+C H L C P L ++ CDWP NV+C +
Sbjct: 780 TTFCKDKPN-GYYADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNVDCDRK 838
Query: 196 T-IPXXXXXXXXXXXXXXXXXXXXXXXXXXXHADPS--------LATEICAEKDSDGVLV 246
T P P + T C +K +G
Sbjct: 839 TPTPPSPTPPTTTPKPACDLHCQTLNPDGSCTVAPGYEVVNGMCVDTTFCKDK-PNGHYA 897
Query: 247 AHEHCTRFYKCFDSHPVAL-ICPPNLLYNPNNEQCDWPHNVECGDRT 292
C++FY+C H L CP L ++ CDWP V+C DRT
Sbjct: 898 DPRDCSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDC-DRT 943
Score = 46.8 bits (106), Expect = 3e-05
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 233 TEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALI-CPPNLLYNPNNEQCDWPHNVECGDR 291
T C +K + G C+RFY+C H L C P L ++ CDWP NV+C DR
Sbjct: 780 TTFCKDKPN-GYYADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNVDC-DR 837
Query: 292 TIP 294
P
Sbjct: 838 KTP 840
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 155 CTRFYKCFDSHPVALI-CPPNLLYNPNNEQCDWPHNVECGDRTIP 198
C +FY C+ S L CP LL++ + CD+PH V+C T P
Sbjct: 582 CAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYPHLVDCSRPTTP 626
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 251 CTRFYKCFDSHPVALI-CPPNLLYNPNNEQCDWPHNVECGDRTIP 294
C +FY C+ S L CP LL++ + CD+PH V+C T P
Sbjct: 582 CAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYPHLVDCSRPTTP 626
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 46 RIGSD-GILVAHEHCTRFYKC-AEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDRTIP 102
R+G G + C +FY C + +CP LL++ + CD+PH V+C T P
Sbjct: 568 RLGKPRGYYADPKDCAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYPHLVDCSRPTTP 626
Score = 38.3 bits (85), Expect = 0.009
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 137 TEICAEKDSDGVLVAHEHCTRFYKCFDSHPVAL-ICPPNLLYNPNNEQCDWPHNVEC 192
T C +K SD +C+R Y+C H L CP L +N CD P NV C
Sbjct: 1451 TSFCKDKTSD-YYHDPRNCSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHPVNVNC 1506
Score = 38.3 bits (85), Expect = 0.009
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 233 TEICAEKDSDGVLVAHEHCTRFYKCFDSHPVAL-ICPPNLLYNPNNEQCDWPHNVEC 288
T C +K SD +C+R Y+C H L CP L +N CD P NV C
Sbjct: 1451 TSFCKDKTSD-YYHDPRNCSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHPVNVNC 1506
Score = 33.9 bits (74), Expect = 0.19
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 58 HCTRFYKCAEGRPVALK-CPPNLLFNPSNEQCDWPHNVEC 96
+C+R Y+C LK CP L +N CD P NV C
Sbjct: 1467 NCSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHPVNVNC 1506
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 75.8 bits (178), Expect = 5e-14
Identities = 58/248 (23%), Positives = 86/248 (34%), Gaps = 40/248 (16%)
Query: 49 SDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDRTIPXXXXXX 108
SDG + C F C+ + CP NL FNP+ + CD P NV+CG P
Sbjct: 447 SDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKHCDNPENVQCGPTRPPTPKVPP 506
Query: 109 XXXXXXXXXXXXXXXXXXXXXHADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVA 168
P + C K +G +C F C + +
Sbjct: 507 TTKA--------------------PFTKSPFCVGK-QNGKYADANNCNGFVMCSNGYIYY 545
Query: 169 LICPPNLLYNPNNEQCDWPHNVECGDRTIPXXXXXXXXXXXXXXXXXXXXXXXXXXXHAD 228
+ CP NL Y+P +C+W V+CG R
Sbjct: 546 MDCPSNLRYDPAKGRCEWADTVDCGQRP-----------------TISPHPPKPTTMPPQ 588
Query: 229 PSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVEC 288
P+ E+ +G +C F C + + CP NL ++ +C+WP+ V C
Sbjct: 589 PTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKVNC 648
Query: 289 GDR--TIP 294
R T+P
Sbjct: 649 KSRPTTVP 656
Score = 65.7 bits (153), Expect = 5e-11
Identities = 42/152 (27%), Positives = 59/152 (38%), Gaps = 22/152 (14%)
Query: 140 CAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECGDRTIPX 199
CAE+ SDG + C F C + + CP NL +NP + CD P NV+CG P
Sbjct: 443 CAER-SDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKHCDNPENVQCGPTRPPT 501
Query: 200 XXXXXXXXXXXXXXXXXXXXXXXXXXHADPSLATEICAEKDSDGVLVAHEHCTRFYKCFD 259
P + C K +G +C F C +
Sbjct: 502 PKVPPTTKA--------------------PFTKSPFCVGK-QNGKYADANNCNGFVMCSN 540
Query: 260 SHPVALICPPNLLYNPNNEQCDWPHNVECGDR 291
+ + CP NL Y+P +C+W V+CG R
Sbjct: 541 GYIYYMDCPSNLRYDPAKGRCEWADTVDCGQR 572
Score = 48.8 bits (111), Expect = 6e-06
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 236 CAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECGDRTIP 294
CAE+ SDG + C F C + + CP NL +NP + CD P NV+CG P
Sbjct: 443 CAER-SDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKHCDNPENVQCGPTRPP 500
Score = 44.0 bits (99), Expect = 2e-04
Identities = 34/137 (24%), Positives = 52/137 (37%), Gaps = 26/137 (18%)
Query: 58 HCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDR--TIPXXXXXXXXXXXXX 115
+C F C+ G CP NL F+ +C+WP+ V C R T+P
Sbjct: 610 NCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKVNCKSRPTTVPYVTKPT------- 662
Query: 116 XXXXXXXXXXXXXXHADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNL 175
PS +E C +K+ +G +C + C + C L
Sbjct: 663 ----------------PPSGNSEFC-KKNGNGRYRDPHNCLGYIVCRGGNIYFRNCRRGL 705
Query: 176 LYNPNNEQCDWPHNVEC 192
+N ++CD P NV+C
Sbjct: 706 RFNGVTKRCDLPRNVKC 722
Score = 42.7 bits (96), Expect = 4e-04
Identities = 36/151 (23%), Positives = 57/151 (37%), Gaps = 27/151 (17%)
Query: 140 CAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECGDR--TI 197
C EK +G +C F C + + CP NL ++ +C+WP+ V C R T+
Sbjct: 597 CEEK-KNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKVNCKSRPTTV 655
Query: 198 PXXXXXXXXXXXXXXXXXXXXXXXXXXXHADPSLATEICAEKDSDGVLVAHEHCTRFYKC 257
P PS +E C +K+ +G +C + C
Sbjct: 656 PYVTKPT-----------------------PPSGNSEFC-KKNGNGRYRDPHNCLGYIVC 691
Query: 258 FDSHPVALICPPNLLYNPNNEQCDWPHNVEC 288
+ C L +N ++CD P NV+C
Sbjct: 692 RGGNIYFRNCRRGLRFNGVTKRCDLPRNVKC 722
Score = 35.9 bits (79), Expect = 0.048
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 50 DGILVAHEHCTRFYKCAEGRPVALK-CPPNLLFNPSNEQCDWPHNV 94
DG +C + C+ G +A + CP L FN + CD+P NV
Sbjct: 321 DGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNV 366
Score = 34.3 bits (75), Expect = 0.15
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 41 TEICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVEC 96
+E C + G+ H +C + C G C L FN ++CD P NV+C
Sbjct: 668 SEFCKKNGNGRYRDPH-NCLGYIVCRGGNIYFRNCRRGLRFNGVTKRCDLPRNVKC 722
Score = 33.5 bits (73), Expect = 0.25
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 133 PSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVA-LICPPNLLYNPNNEQCDWPHNV 190
P + + C E+ DG +C + C + +A CP L +N CD+P NV
Sbjct: 309 PLVDSNFCTERQ-DGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNV 366
Score = 33.5 bits (73), Expect = 0.25
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 229 PSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVA-LICPPNLLYNPNNEQCDWPHNV 286
P + + C E+ DG +C + C + +A CP L +N CD+P NV
Sbjct: 309 PLVDSNFCTERQ-DGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNV 366
Score = 31.9 bits (69), Expect = 0.78
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 230 SLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECG 289
S + C EK SDG +C F C + H + CP ++P ++C+ + +C
Sbjct: 372 SSGSGFCHEK-SDGNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAKKRCE---DYDCS 427
Query: 290 DRTI 293
R +
Sbjct: 428 GRDV 431
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 50 DGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDR 99
DG V +C F KC+ CP NL FN DW + G+R
Sbjct: 736 DGDYVDAVNCNGFIKCSNQLTYYFDCPSNLRFNIKK---DWAEYNKTGER 782
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Query: 142 EKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECGDR 195
E DG V +C F KC + CP NL +N DW + G+R
Sbjct: 732 EGRKDGDYVDAVNCNGFIKCSNQLTYYFDCPSNLRFNIKK---DWAEYNKTGER 782
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Query: 238 EKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECGDR 291
E DG V +C F KC + CP NL +N DW + G+R
Sbjct: 732 EGRKDGDYVDAVNCNGFIKCSNQLTYYFDCPSNLRFNIKK---DWAEYNKTGER 782
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 53.2 bits (122), Expect = 3e-07
Identities = 27/67 (40%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 30 TKGVNFESGKATEICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCD 89
T+G S K C R G DGI E+C F C G CPP L+FN CD
Sbjct: 444 TEGTPKYSNKDGMFCERNG-DGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCD 502
Query: 90 WPHNVEC 96
W H V+C
Sbjct: 503 WSHEVKC 509
Score = 46.8 bits (106), Expect = 3e-05
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 142 EKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVEC 192
E++ DG+ E+C F C CPP L++N + CDW H V+C
Sbjct: 459 ERNGDGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEVKC 509
Score = 46.8 bits (106), Expect = 3e-05
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 238 EKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVEC 288
E++ DG+ E+C F C CPP L++N + CDW H V+C
Sbjct: 459 ERNGDGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEVKC 509
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 138 EICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVEC 192
+ C K ++ C F C + + CP LLYN +QCDWP NV+C
Sbjct: 74 DFCKYKPDGEYRDPYDACRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNVDC 128
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 234 EICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVEC 288
+ C K ++ C F C + + CP LLYN +QCDWP NV+C
Sbjct: 74 DFCKYKPDGEYRDPYDACRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNVDC 128
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 56 HEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVEC 96
++ C F C CP LL+N +QCDWP NV+C
Sbjct: 88 YDACRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNVDC 128
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 44.8 bits (101), Expect = 1e-04
Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 9/154 (5%)
Query: 138 EICAEKDSDGVLVAHEHCTRFYKCFDSHPVA-LICPPNLLYNPNNEQCDWPHNVECGDRT 196
+ C E+D+ G V + C+++Y+C D H C L ++ CD +V+C +
Sbjct: 20 DYCKERDA-GCYVDLKDCSKYYQCDDFHKTHHRTCSEQLKWSAVKNICDHAADVDCDRKP 78
Query: 197 I-PXXXXXXXXXXXXXXXXXXXXXXXXXXXHADPSLATEICAEKDSDGVLVAHEHCTRFY 255
+ P D + + +G +C+RFY
Sbjct: 79 LKPRCDLHCQEKGLDGSCTVMPNWRIEKGMCVDNNYCLLL-----PNGHYHDPRNCSRFY 133
Query: 256 KCFDSHPVAL-ICPPNLLYNPNNEQCDWPHNVEC 288
+C H L CP L ++ CDWP V+C
Sbjct: 134 QCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 167
Score = 38.3 bits (85), Expect = 0.009
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 58 HCTRFYKCAEGRPVAL-KCPPNLLFNPSNEQCDWPHNVEC 96
+C+RFY+C L CP L ++ + CDWP V+C
Sbjct: 128 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 167
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 14 VALSNASVIKENTNKATKGVNFESGKAT-----EICARIGSDGILVAHEHCTRFYKCAEG 68
V S +V N+ + N GKAT + CA +DG + C+ +Y+C +G
Sbjct: 193 VQFSGLTVGDPNSIRCFGQGNIPPGKATPAEDEKFCAG-KTDGTYADPKDCSAYYQCKKG 251
Query: 69 RPVALKCPPNLLFNPSNEQCDWPHNVEC 96
R CP L FN + CD P V C
Sbjct: 252 RSFKKFCPDGLKFNALIKSCDEPSKVNC 279
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 131 ADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV 190
A P+ + CA K +DG + C+ +Y+C CP L +N + CD P V
Sbjct: 219 ATPAEDEKFCAGK-TDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIKSCDEPSKV 277
Query: 191 EC 192
C
Sbjct: 278 NC 279
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 227 ADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNV 286
A P+ + CA K +DG + C+ +Y+C CP L +N + CD P V
Sbjct: 219 ATPAEDEKFCAGK-TDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIKSCDEPSKV 277
Query: 287 EC 288
C
Sbjct: 278 NC 279
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 34 NFESGKATEICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHN 93
N S + IC +DG + C + C+ G + CP L +N + CDWP N
Sbjct: 76 NLFSVNLSTICKN-RADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFN 134
Query: 94 VEC 96
C
Sbjct: 135 APC 137
Score = 38.3 bits (85), Expect = 0.009
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 139 ICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVEC 192
IC + +DG + C + C + + CP L +N + CDWP N C
Sbjct: 85 ICKNR-ADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPC 137
Score = 38.3 bits (85), Expect = 0.009
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 235 ICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVEC 288
IC + +DG + C + C + + CP L +N + CDWP N C
Sbjct: 85 ICKNR-ADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPC 137
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 37 SGKATEICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVEC 96
+G+ C + ++G E+C + C+ +CP L +N + + CDWP N C
Sbjct: 55 NGEVNSFCKK-RANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPC 113
Query: 97 GDR 99
++
Sbjct: 114 EEK 116
Score = 37.5 bits (83), Expect = 0.016
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 142 EKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECGDR 195
+K ++G E+C + C + CP L +N + CDWP N C ++
Sbjct: 63 KKRANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPCEEK 116
Score = 37.5 bits (83), Expect = 0.016
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 238 EKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECGDR 291
+K ++G E+C + C + CP L +N + CDWP N C ++
Sbjct: 63 KKRANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPCEEK 116
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 154 HCTRFYKCFDSHPVAL-ICPPNLLYNPNNEQCDWPHNVEC 192
+C+RFY+C H L CP L ++ CDWP V+C
Sbjct: 35 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 74
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 250 HCTRFYKCFDSHPVAL-ICPPNLLYNPNNEQCDWPHNVEC 288
+C+RFY+C H L CP L ++ CDWP V+C
Sbjct: 35 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 74
Score = 38.3 bits (85), Expect = 0.009
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 58 HCTRFYKCAEGRPVAL-KCPPNLLFNPSNEQCDWPHNVEC 96
+C+RFY+C L CP L ++ + CDWP V+C
Sbjct: 35 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 74
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 36.3 bits (80), Expect = 0.036
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 134 SLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVEC 192
S+ ++CA+K L C +Y C V C P +++P C+W +C
Sbjct: 16 SVHADLCADKPHGAYLPDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKC 74
Score = 36.3 bits (80), Expect = 0.036
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 230 SLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVEC 288
S+ ++CA+K L C +Y C V C P +++P C+W +C
Sbjct: 16 SVHADLCADKPHGAYLPDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKC 74
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 42 EICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVEC 96
++CA L C +Y C G+ V C P +++P C+W +C
Sbjct: 20 DLCADKPHGAYLPDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKC 74
>SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 64
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 138 EICAEKDSDGVLVAHEHCTRFYKCFDSHPV-ALICPPNLLYNPNNEQCDWPHNVEC 192
+ C E+D+ G V + C+++Y+C D H C L ++ CD +V+C
Sbjct: 2 DFCKERDA-GCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDC 56
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 234 EICAEKDSDGVLVAHEHCTRFYKCFDSHPV-ALICPPNLLYNPNNEQCDWPHNVEC 288
+ C E+D+ G V + C+++Y+C D H C L ++ CD +V+C
Sbjct: 2 DFCKERDA-GCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDC 56
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 138 EICAEKDSDGVLVAHEHCTRFYKCFDSHPV-ALICPPNLLYNPNNEQCDWPHNVEC 192
+ C E+D+ G V + C+++Y+C D H C L ++ CD +V+C
Sbjct: 69 DFCKERDA-GCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDC 123
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 234 EICAEKDSDGVLVAHEHCTRFYKCFDSHPV-ALICPPNLLYNPNNEQCDWPHNVEC 288
+ C E+D+ G V + C+++Y+C D H C L ++ CD +V+C
Sbjct: 69 DFCKERDA-GCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDC 123
>SB_725| Best HMM Match : Apolipoprotein (HMM E-Value=0.51)
Length = 567
Score = 32.3 bits (70), Expect = 0.59
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 132 DPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQC 184
D L + +K+SD E T +KCF S P ++C L P E C
Sbjct: 252 DDGLVAIVVKKKESDVRQQQQEFVTALHKCFGSKPTVMVCVDGL--KPLPEDC 302
Score = 32.3 bits (70), Expect = 0.59
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 228 DPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQC 280
D L + +K+SD E T +KCF S P ++C L P E C
Sbjct: 252 DDGLVAIVVKKKESDVRQQQQEFVTALHKCFGSKPTVMVCVDGL--KPLPEDC 302
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 46 RIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWP 91
++ + G+ ++ ++F C G +C L+FNP + C+ P
Sbjct: 8 KVKTSGVYADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQP 53
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 135 LATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWP 187
L++ C K S GV ++ ++F C++ C L++NP + C+ P
Sbjct: 2 LSSNFCKVKTS-GVYADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQP 53
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 231 LATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWP 283
L++ C K S GV ++ ++F C++ C L++NP + C+ P
Sbjct: 2 LSSNFCKVKTS-GVYADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQP 53
>SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19)
Length = 2253
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 132 DPSLATEICAEKDSDGVLVAHEHCT 156
+ ++ ++ AEKD +G+L AHE CT
Sbjct: 1723 EENIDKKMMAEKDDNGILRAHEVCT 1747
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 228 DPSLATEICAEKDSDGVLVAHEHCT 252
+ ++ ++ AEKD +G+L AHE CT
Sbjct: 1723 EENIDKKMMAEKDDNGILRAHEVCT 1747
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.136 0.454
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,636,906
Number of Sequences: 59808
Number of extensions: 377339
Number of successful extensions: 681
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 591
Number of HSP's gapped (non-prelim): 86
length of query: 342
length of database: 16,821,457
effective HSP length: 83
effective length of query: 259
effective length of database: 11,857,393
effective search space: 3071064787
effective search space used: 3071064787
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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