SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001503-TA|BGIBMGA001503-
PA|IPR005135|Endonuclease/exonuclease/phosphatase
         (534 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    43   6e-04
Z95310-2|CAB08563.1|  394|Caenorhabditis elegans Hypothetical pr...    33   0.38 
Z83104-6|CAB05479.1|  394|Caenorhabditis elegans Hypothetical pr...    33   0.38 
AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical ...    33   0.38 
AF063007-1|AAC16430.2|  730|Caenorhabditis elegans Hypothetical ...    33   0.66 
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr...    31   1.5  
AL032623-13|CAA21517.1|  147|Caenorhabditis elegans Hypothetical...    31   2.0  
Z66561-4|CAA91457.2|  185|Caenorhabditis elegans Hypothetical pr...    30   3.5  
U80454-6|AAB37879.1|  786|Caenorhabditis elegans Hypothetical pr...    30   3.5  
Z78062-2|CAB01499.2|  689|Caenorhabditis elegans Hypothetical pr...    30   4.7  
AF026207-1|AAB71266.1|  522|Caenorhabditis elegans Hypothetical ...    30   4.7  
AF024500-2|AAB70360.1|  467|Caenorhabditis elegans Hypothetical ...    30   4.7  
Z92828-5|CAB07332.2|  586|Caenorhabditis elegans Hypothetical pr...    29   6.2  
Z75542-2|CAA99862.2|  712|Caenorhabditis elegans Hypothetical pr...    29   6.2  
CU457741-7|CAM36348.1|  710|Caenorhabditis elegans Hypothetical ...    29   6.2  
AY594354-1|AAT01444.1|  539|Caenorhabditis elegans cofactor-inde...    29   6.2  
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    29   6.2  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    29   6.2  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    29   6.2  
AF468834-1|AAL77082.1|  586|Caenorhabditis elegans PRY-1 protein.      29   6.2  
AF043695-18|AAB97548.2|  710|Caenorhabditis elegans Hypothetical...    29   6.2  
AF039713-12|AAO12419.1|  521|Caenorhabditis elegans Hypothetical...    29   6.2  
AF039713-11|AAB96720.1|  539|Caenorhabditis elegans Hypothetical...    29   6.2  
AB069909-1|BAB62876.1|  747|Caenorhabditis elegans junctophilin ...    29   6.2  
Z81587-3|CAB04700.1|  362|Caenorhabditis elegans Hypothetical pr...    29   8.2  
Z50756-1|CAA90637.2|  737|Caenorhabditis elegans Hypothetical pr...    29   8.2  
U41038-5|AAK29710.4|  519|Caenorhabditis elegans Hypothetical pr...    29   8.2  
U41007-3|AAA82267.1|  297|Caenorhabditis elegans Hypothetical pr...    29   8.2  

>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
           protein F21E9.1 protein.
          Length = 1170

 Score = 42.7 bits (96), Expect = 6e-04
 Identities = 92/425 (21%), Positives = 174/425 (40%), Gaps = 41/425 (9%)

Query: 65  SLNFLYANVRSIVKPGKFDELKCVLKSIDKGVHVVLLTETWIKSENDAMKLHLPNYTHHY 124
           ++NF  ANVR +    K   LK    S D  + ++LLTET++ +   +   + PN +   
Sbjct: 316 NINFSLANVRGVSALPKIIMLKEFFASSD--IDILLLTETFLSNIVPSSLFNAPNMSFLR 373

Query: 125 SYRND-----IRGGGVSIYVHNNIKHSTTED-----KYSNGNNYLWVYLEQHG------- 167
             RN      + GGGV++ +H +  + T  D      Y      +  +   +        
Sbjct: 374 LDRNPELHSKVSGGGVAV-MHKSSLNITLRDINFETHYPKHRCEILAFDIHNAEPASSAS 432

Query: 168 --LHVGVVYKPG--STNTEDFLIDYEQQLHDRNRTIIFGDFNLDLLQ-EDKQTKMYKQML 222
             L + ++Y+P   S +    LI + +     +RTI+ GD N   +      + ++    
Sbjct: 433 SPLSIFLIYRPPCCSVSENAALIAHLESYIPLSRTILAGDLNFPQINWSSANSSLHPFAS 492

Query: 223 CENGYKILNKVEEEYCTRETSTTRTILDHVTTNLKNKNVHLAIVESCM-SDHKQIYVAIK 281
             +   +  KV+  + TR ++++  ILD V  +     +HL+   + + SDH  +   I 
Sbjct: 493 FLSSINLSQKVQ--FPTRLSASSSNILDLVACSADISILHLSPQPALLNSDHLSVSFKIP 550

Query: 282 KQQVISKQRSKYEAIDYSSL--YKKFDSSKLDNSNYEYKHLEDVIKQNIRENTKTKSKIL 339
               I       +  + S +  YKK +   L+ +   +   E   ++++ E       IL
Sbjct: 551 ILSPIDSPCPTSQDSNSSPMFDYKKCNFPLLNRARVNWD-FEFCSQKSVSEKFDRLLSIL 609

Query: 340 N-LPQQDWITKNIT--DGINRRNKLWYKLKKDPNNEDLKANFKTERNQVTRDIQSAKRKY 396
           N L      TK+I+     +  + +  KLK+  N        +    ++ +  QS  RK 
Sbjct: 610 NNLLTLHCPTKSISVSKSPSPYHNIHRKLKRLRNKISKLILSRKCTFEIIKTAQSKYRKL 669

Query: 397 YLDAFNKCSKK------PKKMWSLINTLATNKLKKKCLLPKIHSTEGRIIQEDHICEYFN 450
           Y + F K  ++          ++ I  L  ++LK + L+P I      I+ +    E F 
Sbjct: 670 YRN-FRKYVRRFENDIIANSNFTKIRRLINSRLKSQNLVPSIILDNKSIVNDSEKSEIFA 728

Query: 451 KFFST 455
           K F++
Sbjct: 729 KIFAS 733


>Z95310-2|CAB08563.1|  394|Caenorhabditis elegans Hypothetical
           protein F09B12.5 protein.
          Length = 394

 Score = 33.5 bits (73), Expect = 0.38
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 182 EDFLIDYEQQLHDRNRT-IIFGDFNLDLLQEDKQTKMYKQMLCENGYKILNKVEEEYCTR 240
           E  +  Y+ QL DR+ T  IF   + D + +     +    +C+  +      +E+ CT+
Sbjct: 126 ESLMRKYQSQLADRSTTTFIFNCASEDYICKSSGLCLKPNKICDGKFDCDGGDDEKNCTK 185

Query: 241 ETSTTRTILDHVTT 254
             +TT TI + ++T
Sbjct: 186 SNATTTTISNSLST 199


>Z83104-6|CAB05479.1|  394|Caenorhabditis elegans Hypothetical
           protein F09B12.5 protein.
          Length = 394

 Score = 33.5 bits (73), Expect = 0.38
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 182 EDFLIDYEQQLHDRNRT-IIFGDFNLDLLQEDKQTKMYKQMLCENGYKILNKVEEEYCTR 240
           E  +  Y+ QL DR+ T  IF   + D + +     +    +C+  +      +E+ CT+
Sbjct: 126 ESLMRKYQSQLADRSTTTFIFNCASEDYICKSSGLCLKPNKICDGKFDCDGGDDEKNCTK 185

Query: 241 ETSTTRTILDHVTT 254
             +TT TI + ++T
Sbjct: 186 SNATTTTISNSLST 199


>AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical
           protein Y40C7B.1 protein.
          Length = 916

 Score = 33.5 bits (73), Expect = 0.38
 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 8/127 (6%)

Query: 274 KQIYVAIKKQQVISKQRSKYEAIDY---SSLYKKFDSSKLDNSNYEYKHLEDVIKQNIRE 330
           KQI VAI  ++ + +QR K +  +Y     + ++ +  K  N   E +  ED  K+N +E
Sbjct: 188 KQIPVAISTREELQQQRHKQQLEEYEKRKEILRREEEIKQQNQEREKQINEDFEKRN-QE 246

Query: 331 NTKTKSKILNLPQQDWITKNITDGINRR--NKLWYKLKKDPNNEDLKANFKTERNQVTRD 388
             K + +I    Q+    K I D   +R   KL  +   + N +      K  +    R 
Sbjct: 247 KLKREEEIKQQNQER--EKQINDDFEKRKLEKLQREKLFEKNKQAKLQREKAHQESERRK 304

Query: 389 IQSAKRK 395
           ++  KR+
Sbjct: 305 LEKLKRE 311


>AF063007-1|AAC16430.2|  730|Caenorhabditis elegans Hypothetical
           protein R119.1 protein.
          Length = 730

 Score = 32.7 bits (71), Expect = 0.66
 Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 2/61 (3%)

Query: 297 DYSSLYKKFDSSKLDNS-NYEYKHLEDVIKQNIRENTKTKSKILNLPQQDWITKNITDGI 355
           D++ +Y+ F+   LDN    EY+      ++N+ ++ KT S I+ + + ++  K+ITD +
Sbjct: 539 DWNDIYQNFNRF-LDNLVPLEYRLYSPPKRENLTDHVKTISMIITMKKPNFKVKSITDLL 597

Query: 356 N 356
           N
Sbjct: 598 N 598


>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
           protein F59A6.5 protein.
          Length = 1286

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 39/218 (17%), Positives = 90/218 (41%), Gaps = 14/218 (6%)

Query: 141 NNIKHSTTEDKYSNGNNYLW-VYLEQHGLHVGVVYKPGSTNTEDFLIDYEQQLHDRNRTI 199
           NN  H   + +  +  N +  +  E+  LH  +V K G    E  +I+  +++  +   I
Sbjct: 40  NNESHEDLKKRVLDAENIIQDLRSERDALHETLVDKAGLN--ESVIIEQSKRVSTQETRI 97

Query: 200 IFGDFNLDLLQEDKQTKMYKQMLCENGYKILNKVEEEYCTRETSTTRTILDHVTTNLKNK 259
              D NL  L++D +    +  + +N    L ++E++         +       T L++ 
Sbjct: 98  YRRDVNL--LEDDLKHHQSQIRILQNKCSTL-EMEKQTLQETIQRAQDDKKETETELESS 154

Query: 260 NVHLAIVESCMSDHKQIYVAIKKQQVISKQRSKYEAIDYSSLYKKFDSSKLDNSNYEYKH 319
              L ++E  +S         K   +    +  ++  +  + ++    +KL  +N E K 
Sbjct: 155 RSRLHVLEKELS--------AKANDIFMVTKDLHDKNEELTSFRMEYVTKLSEANREKKA 206

Query: 320 LEDVIKQNIRENTKTKSKILNLPQQDWITKNITDGINR 357
           LE+ +++   +  +   K L L ++   T+N+   + +
Sbjct: 207 LEEKLEKYKNDMKENDRKSLELNKEQVTTQNVLSEVRQ 244


>AL032623-13|CAA21517.1|  147|Caenorhabditis elegans Hypothetical
           protein Y43F8B.12 protein.
          Length = 147

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 17/63 (26%), Positives = 29/63 (46%)

Query: 315 YEYKHLEDVIKQNIRENTKTKSKILNLPQQDWITKNITDGINRRNKLWYKLKKDPNNEDL 374
           YE K+++  +KQNI ++    + I+     D I  N+   + +  KL  K      NE  
Sbjct: 78  YELKNMKKKLKQNILKSVSEMNNIIKKADIDMINNNLKPFLKQMEKLPTKKTVTIGNESF 137

Query: 375 KAN 377
           + N
Sbjct: 138 EYN 140


>Z66561-4|CAA91457.2|  185|Caenorhabditis elegans Hypothetical
           protein F08G12.5 protein.
          Length = 185

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 4/88 (4%)

Query: 367 KDPNNEDLKANFKTERNQVTRDIQSAKRKYYLDAFNKCSKKPKK-MWSLINTL-ATN-KL 423
           ++PN          +R  +++ IQ+   K  LD+ N+ S++ +K   +  NTL A+N +L
Sbjct: 78  REPNRNSFHCPICRKRVSMSKVIQNYTLKNVLDSINELSREEEKSRRAYDNTLDASNEQL 137

Query: 424 KKKCL-LPKIHSTEGRIIQEDHICEYFN 450
           + KC+ L +   +  R I E    EY+N
Sbjct: 138 RVKCIDLERKADSLKREINEMRRKEYYN 165


>U80454-6|AAB37879.1|  786|Caenorhabditis elegans Hypothetical
           protein T16A1.2 protein.
          Length = 786

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 43/196 (21%), Positives = 81/196 (41%), Gaps = 19/196 (9%)

Query: 341 LPQQDWITKNITDGINRRNKLWYKLKKDPNNEDLKANFKTERNQVTRDIQSAKRKYYLDA 400
           LPQ+  +   I   IN +N +  K+      +D+  N  ++  +++  I S +  + +  
Sbjct: 386 LPQKLHLIGYIVQVINNKNGILDKI------DDISDNNSSDFKKISGLIMSLRHHFEILK 439

Query: 401 FNKCSKKPKKMWSLINTLA--TNKLKKKCLLPKIH-----STEGRIIQEDHICEYFNKFF 453
                K+  +M    N +    +  K K LL  +      S E        I E     +
Sbjct: 440 SGDMKKEITEMMKYQNAIPEIVSGTKGKSLLSWLKCQNNFSMESVDSAAKLIVEMSGTVY 499

Query: 454 STVGTTLADKIPQKFHGNHTHILPNNSV---TNVVLQNLNLCTPDEIEKHIDNLDPNTST 510
            TVGTT+ D +  +F    T +   + +     ++L+ +   T  ++ +H+ NLD  + T
Sbjct: 500 ETVGTTIYDTVEDRFDEVSTVVETTSGIVKNVRLLLKEIKNQTTTDL-RHLKNLDKYSKT 558

Query: 511 GIDGISAKTLKCLKNA 526
              G + K L  +K A
Sbjct: 559 --FGEAVKALVSIKKA 572


>Z78062-2|CAB01499.2|  689|Caenorhabditis elegans Hypothetical
           protein F16D3.2 protein.
          Length = 689

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 6/116 (5%)

Query: 268 SCMSDHKQIYVAIKKQQVISKQRSKYEAI--DYSSLYKKFDSSKLDNSNYEYKHL--EDV 323
           S +SD+ Q + +    +  +++RS+ +A   D + L ++F+SS ++      + +   DV
Sbjct: 259 SNISDYSQ-FSSDTNAESNTERRSRPDASSPDLADLARRFNSSSINVQPQPLESVASSDV 317

Query: 324 IKQNIRENTKTKSKILNLPQQDWITKNITDGINRRNKLWYKLKKDPNNEDLKANFK 379
           + + I +  +   K LN  ++  + +N+ D I R+NK+    K     ED   + K
Sbjct: 318 LSKKIAKAVRKIMKKLNEGEKLSL-ENLFDEIERKNKILIPGKNGKEKEDFLKDLK 372


>AF026207-1|AAB71266.1|  522|Caenorhabditis elegans Hypothetical
           protein H42K12.3 protein.
          Length = 522

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 6/82 (7%)

Query: 234 EEEYCTRETSTTRTILDHVTTNLK-----NKNVHLAIVESCMSDHKQIYVAIKKQQVISK 288
           EEE  T E  TT T  +  TT          ++H  I +   +   + Y  +KKQ+ + K
Sbjct: 291 EEEVTTTEAPTTTTTTEEPTTEASAPKRIKAHLHKKIKKHPKNFGSKTYEILKKQETVKK 350

Query: 289 QRSKYEAIDYSSLYK-KFDSSK 309
            + ++  I+   + +   DSS+
Sbjct: 351 SKIEFPEIEEQEITEDSADSSR 372


>AF024500-2|AAB70360.1|  467|Caenorhabditis elegans Hypothetical
           protein K06H6.4 protein.
          Length = 467

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 17/59 (28%), Positives = 26/59 (44%)

Query: 317 YKHLEDVIKQNIRENTKTKSKILNLPQQDWITKNITDGINRRNKLWYKLKKDPNNEDLK 375
           Y+ +E  +     E     +    LP + WI KN+T+ I  R KL Y +      E +K
Sbjct: 387 YRSVEQRVFPGALERMMKHAPFNILPVEQWIEKNLTENILSRVKLVYDIVDVTCEEKMK 445


>Z92828-5|CAB07332.2|  586|Caenorhabditis elegans Hypothetical
           protein C37A5.9 protein.
          Length = 586

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 15/76 (19%), Positives = 36/76 (47%)

Query: 265 IVESCMSDHKQIYVAIKKQQVISKQRSKYEAIDYSSLYKKFDSSKLDNSNYEYKHLEDVI 324
           ++E     +  ++ AI+  + ++ +    ++    S+Y KF SS+  N     KH    I
Sbjct: 28  LIEYSSPQYLDLFFAIRAYERMALEGKPEKSQLSKSIYSKFLSSRTGNCEAIPKHFRAPI 87

Query: 325 KQNIRENTKTKSKILN 340
            + +R  T+ + ++ +
Sbjct: 88  GEKLRHGTELEDRVFS 103


>Z75542-2|CAA99862.2|  712|Caenorhabditis elegans Hypothetical
           protein F55D12.2 protein.
          Length = 712

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 6/138 (4%)

Query: 219 KQMLCENGYKILNKVEEEYCTRETSTTRTILDHVTTNLKNKNVHLAIVESCMSDHKQIYV 278
           KQ+L        + ++E           T    +   ++N    L +VES M+ H+Q+  
Sbjct: 502 KQLLSMAKNSERSAMKESSTDERKEKLETAWKELNLAIQNNEQRLKVVESFMATHRQMME 561

Query: 279 AIKKQQVISKQRSKYEAIDYSSLYKKFDSSKLDNSNYEYKHLEDVIKQNIRENTKTKSKI 338
            + + +   ++R +      +S+    +  +L N   E  ++ +++   I  +  T    
Sbjct: 562 RVNEIEKSLRERLRVSG-KLNSIVLSTERKRLKNDIEELSNIGNMLSAQINADHAT---- 616

Query: 339 LNLPQQDWITKNITDGIN 356
             L  +    K I+D IN
Sbjct: 617 -TLQDRQTAVKQISDKIN 633


>CU457741-7|CAM36348.1|  710|Caenorhabditis elegans Hypothetical
           protein C42C1.7 protein.
          Length = 710

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)

Query: 366 KKDPNNEDLKANFKTERNQVTRDIQSAKRK-YYLDAFNKCSKKPKKMWS--LINTLATNK 422
           +K+  N +  + +K  RNQ+ + I + K+K + LDAF + + +     +  L N +  N+
Sbjct: 568 EKNDTNLEKDSTYKEMRNQMNQFIPNIKKKLFVLDAFPRTNNQYTLQLAKDLKNGIDINE 627

Query: 423 LKKKCLLP 430
           + KK + P
Sbjct: 628 IHKKIVQP 635


>AY594354-1|AAT01444.1|  539|Caenorhabditis elegans
           cofactor-independent phosphoglyceratemutase protein.
          Length = 539

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 6/46 (13%)

Query: 130 IRGGGVSIYVHNN-IKHSTTE--DKYSNGNNYLWVYLEQHGLHVGV 172
           I G GVS   + N I ++ T   DK  +GN   W  +E HGLHVG+
Sbjct: 36  IDGWGVSEDPYGNAILNAQTPVMDKLCSGN---WAQIEAHGLHVGL 78


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 10/148 (6%)

Query: 281  KKQQVISKQRSKYEAIDYSSLYKKFDSSKLDNSNYEYKHLEDVIKQNIRENTKTKSKI-- 338
            K+++   KQ+ + E     S  +K   SKL+      +  E+   +  +E T+  SK   
Sbjct: 9358 KQKETDEKQKLEAEIAGKKSTEQK---SKLEAEAKLKRAAEEDAAKKQKEKTEAASKKAA 9414

Query: 339  ---LNLPQQDWITKNI-TDGINRRNKLWYKLKKDPNNEDLKANFKTERNQVTRDIQSAKR 394
               L L +Q  I K    D + ++N+L  + K +   +      K E     +  Q+A+ 
Sbjct: 9415 AEKLELEKQAQINKAAEADAVKKQNELDEQNKLEATKKLAAEKLKLEEQSAAKSKQAAEE 9474

Query: 395  KYYLDAFNKCSKKPKKMWSLINTLATNK 422
            +  LDA  K +K  +K   L     +NK
Sbjct: 9475 QAKLDAQTK-AKAAEKQTGLEKDEKSNK 9501


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
            protein.
          Length = 18519

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 10/148 (6%)

Query: 281  KKQQVISKQRSKYEAIDYSSLYKKFDSSKLDNSNYEYKHLEDVIKQNIRENTKTKSKI-- 338
            K+++   KQ+ + E     S  +K   SKL+      +  E+   +  +E T+  SK   
Sbjct: 9378 KQKETDEKQKLEAEIAGKKSTEQK---SKLEAEAKLKRAAEEDAAKKQKEKTEAASKKAA 9434

Query: 339  ---LNLPQQDWITKNI-TDGINRRNKLWYKLKKDPNNEDLKANFKTERNQVTRDIQSAKR 394
               L L +Q  I K    D + ++N+L  + K +   +      K E     +  Q+A+ 
Sbjct: 9435 AEKLELEKQAQINKAAEADAVKKQNELDEQNKLEATKKLAAEKLKLEEQSAAKSKQAAEE 9494

Query: 395  KYYLDAFNKCSKKPKKMWSLINTLATNK 422
            +  LDA  K +K  +K   L     +NK
Sbjct: 9495 QAKLDAQTK-AKAAEKQTGLEKDEKSNK 9521


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
            protein.
          Length = 18534

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 10/148 (6%)

Query: 281  KKQQVISKQRSKYEAIDYSSLYKKFDSSKLDNSNYEYKHLEDVIKQNIRENTKTKSKI-- 338
            K+++   KQ+ + E     S  +K   SKL+      +  E+   +  +E T+  SK   
Sbjct: 9378 KQKETDEKQKLEAEIAGKKSTEQK---SKLEAEAKLKRAAEEDAAKKQKEKTEAASKKAA 9434

Query: 339  ---LNLPQQDWITKNI-TDGINRRNKLWYKLKKDPNNEDLKANFKTERNQVTRDIQSAKR 394
               L L +Q  I K    D + ++N+L  + K +   +      K E     +  Q+A+ 
Sbjct: 9435 AEKLELEKQAQINKAAEADAVKKQNELDEQNKLEATKKLAAEKLKLEEQSAAKSKQAAEE 9494

Query: 395  KYYLDAFNKCSKKPKKMWSLINTLATNK 422
            +  LDA  K +K  +K   L     +NK
Sbjct: 9495 QAKLDAQTK-AKAAEKQTGLEKDEKSNK 9521


>AF468834-1|AAL77082.1|  586|Caenorhabditis elegans PRY-1 protein.
          Length = 586

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 15/76 (19%), Positives = 36/76 (47%)

Query: 265 IVESCMSDHKQIYVAIKKQQVISKQRSKYEAIDYSSLYKKFDSSKLDNSNYEYKHLEDVI 324
           ++E     +  ++ AI+  + ++ +    ++    S+Y KF SS+  N     KH    I
Sbjct: 28  LIEYSSPQYLDLFFAIRAYERMALEGKPEKSQLSKSIYSKFLSSRTGNCEAIPKHFRAPI 87

Query: 325 KQNIRENTKTKSKILN 340
            + +R  T+ + ++ +
Sbjct: 88  GEKLRHGTELEDRVFS 103


>AF043695-18|AAB97548.2|  710|Caenorhabditis elegans Hypothetical
           protein C42C1.7 protein.
          Length = 710

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)

Query: 366 KKDPNNEDLKANFKTERNQVTRDIQSAKRK-YYLDAFNKCSKKPKKMWS--LINTLATNK 422
           +K+  N +  + +K  RNQ+ + I + K+K + LDAF + + +     +  L N +  N+
Sbjct: 568 EKNDTNLEKDSTYKEMRNQMNQFIPNIKKKLFVLDAFPRTNNQYTLQLAKDLKNGIDINE 627

Query: 423 LKKKCLLP 430
           + KK + P
Sbjct: 628 IHKKIVQP 635


>AF039713-12|AAO12419.1|  521|Caenorhabditis elegans Hypothetical
           protein F57B10.3b protein.
          Length = 521

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 6/46 (13%)

Query: 130 IRGGGVSIYVHNN-IKHSTTE--DKYSNGNNYLWVYLEQHGLHVGV 172
           I G GVS   + N I ++ T   DK  +GN   W  +E HGLHVG+
Sbjct: 18  IDGWGVSEDPYGNAILNAQTPVMDKLCSGN---WAQIEAHGLHVGL 60


>AF039713-11|AAB96720.1|  539|Caenorhabditis elegans Hypothetical
           protein F57B10.3a protein.
          Length = 539

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 6/46 (13%)

Query: 130 IRGGGVSIYVHNN-IKHSTTE--DKYSNGNNYLWVYLEQHGLHVGV 172
           I G GVS   + N I ++ T   DK  +GN   W  +E HGLHVG+
Sbjct: 36  IDGWGVSEDPYGNAILNAQTPVMDKLCSGN---WAQIEAHGLHVGL 78


>AB069909-1|BAB62876.1|  747|Caenorhabditis elegans junctophilin
           protein.
          Length = 747

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 12/70 (17%)

Query: 450 NKFFSTVGTTLADKIPQKFHGNHTHILPNNSVTNVVLQ--------NLNLCTP----DEI 497
           + F  T+   +A+ +       H H++PN++  +V           N  L TP    D +
Sbjct: 459 HSFEQTLSVDMAEDMTPPSKAYHNHVMPNSNTNHVNFMPQYGYSDPNSQLQTPINSQDLL 518

Query: 498 EKHIDNLDPN 507
           + HI NLDP+
Sbjct: 519 QPHIPNLDPS 528


>Z81587-3|CAB04700.1|  362|Caenorhabditis elegans Hypothetical
           protein T06G6.4 protein.
          Length = 362

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 12/140 (8%)

Query: 231 NKVEEEYCTRETSTTRTILDHVTTNLKNKNVHLAIVESCMSDHKQIYVAIKKQQVISKQR 290
           +K  E+    + S T  +LD +T +L++K   L I++  +SD  Q    +      S + 
Sbjct: 131 SKETEDKLRVDLSKTIGVLDFLTRDLESKGKSLEILQKKVSDLTQRNDTVGFTSYFSYE- 189

Query: 291 SKYEAIDYSSLYKKFDSSKLDNSNYEYK---------HLEDVIKQNIRE-NTKTKSKILN 340
            KY  +    + K+ +  ++     E           ++ED ++  I++     +   LN
Sbjct: 190 -KYSCVFNKKIAKQKEKGEMKKQIQELTEKVEKKGAGNIEDQLQAKIKDLEDVLRQMTLN 248

Query: 341 LPQQDWITKNITDGINRRNK 360
           L ++   +K   D ++RR+K
Sbjct: 249 LTKEQAKSKATCDKLHRRSK 268


>Z50756-1|CAA90637.2|  737|Caenorhabditis elegans Hypothetical
           protein T08D10.2 protein.
          Length = 737

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 293 YEAIDYSSL--YKKFDSSKLDNSNYEYKHLEDVIKQNIRENTKTKSKILNLPQQD 345
           +  I+ S+L  Y  F   K+ N N E KHL +V+K N       + K+ N P  D
Sbjct: 312 FNMIERSTLLSYYNFAKEKV-NLNAERKHLYEVLKTNRLTALLAEQKLKNTPPSD 365


>U41038-5|AAK29710.4|  519|Caenorhabditis elegans Hypothetical
           protein F59C12.3 protein.
          Length = 519

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 10/128 (7%)

Query: 308 SKLDNSNYEYKHLEDVIKQNIRENTKTKSKILNLPQQDWITKNITDGINRRNKLWYKLKK 367
           SKL    Y Y  LE   +    E  K ++  LN+  Q  + K++      R+ L  +L+K
Sbjct: 156 SKLQQIEYSYARLEKEYEYLANERKKQENLELNVIIQ--LEKSVKKLTIERDDLQMRLEK 213

Query: 368 DPNNEDLKANFKTERNQVTRDIQSAK--RKYYLDAFNKCSKKPKKMWSLINTLATN---- 421
                 + AN      Q  +++ + K  +K  ++A N+  ++ +   +++     N    
Sbjct: 214 ASTEPTMVANLMLNEIQQRQELFACKERQKMEIEAQNQTLEEQRNHIAMLEKALANSQER 273

Query: 422 --KLKKKC 427
             K +KKC
Sbjct: 274 LAKREKKC 281


>U41007-3|AAA82267.1|  297|Caenorhabditis elegans Hypothetical
           protein C33H5.8 protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 16/50 (32%), Positives = 24/50 (48%)

Query: 357 RRNKLWYKLKKDPNNEDLKANFKTERNQVTRDIQSAKRKYYLDAFNKCSK 406
           R  K  +K   DPN E    + K ++N    D+ S +R  YL +  K +K
Sbjct: 96  RDMKTCFKYSNDPNMERQANDLKGKKNVQVIDLPSIERDEYLQSDEKFTK 145


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.316    0.132    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,419,421
Number of Sequences: 27539
Number of extensions: 662847
Number of successful extensions: 2122
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2111
Number of HSP's gapped (non-prelim): 33
length of query: 534
length of database: 12,573,161
effective HSP length: 85
effective length of query: 449
effective length of database: 10,232,346
effective search space: 4594323354
effective search space used: 4594323354
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)

- SilkBase 1999-2023 -