Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001503-TA|BGIBMGA001503-
PA|IPR005135|Endonuclease/exonuclease/phosphatase
(534 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 43 6e-04
Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical pr... 33 0.38
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 33 0.38
AF063007-1|AAC16430.2| 730|Caenorhabditis elegans Hypothetical ... 33 0.66
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL032623-13|CAA21517.1| 147|Caenorhabditis elegans Hypothetical... 31 2.0
Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical pr... 30 3.5
U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical pr... 30 3.5
Z78062-2|CAB01499.2| 689|Caenorhabditis elegans Hypothetical pr... 30 4.7
AF026207-1|AAB71266.1| 522|Caenorhabditis elegans Hypothetical ... 30 4.7
AF024500-2|AAB70360.1| 467|Caenorhabditis elegans Hypothetical ... 30 4.7
Z92828-5|CAB07332.2| 586|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z75542-2|CAA99862.2| 712|Caenorhabditis elegans Hypothetical pr... 29 6.2
CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical ... 29 6.2
AY594354-1|AAT01444.1| 539|Caenorhabditis elegans cofactor-inde... 29 6.2
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 6.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 6.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 6.2
AF468834-1|AAL77082.1| 586|Caenorhabditis elegans PRY-1 protein. 29 6.2
AF043695-18|AAB97548.2| 710|Caenorhabditis elegans Hypothetical... 29 6.2
AF039713-12|AAO12419.1| 521|Caenorhabditis elegans Hypothetical... 29 6.2
AF039713-11|AAB96720.1| 539|Caenorhabditis elegans Hypothetical... 29 6.2
AB069909-1|BAB62876.1| 747|Caenorhabditis elegans junctophilin ... 29 6.2
Z81587-3|CAB04700.1| 362|Caenorhabditis elegans Hypothetical pr... 29 8.2
Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical pr... 29 8.2
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 29 8.2
U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical pr... 29 8.2
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 42.7 bits (96), Expect = 6e-04
Identities = 92/425 (21%), Positives = 174/425 (40%), Gaps = 41/425 (9%)
Query: 65 SLNFLYANVRSIVKPGKFDELKCVLKSIDKGVHVVLLTETWIKSENDAMKLHLPNYTHHY 124
++NF ANVR + K LK S D + ++LLTET++ + + + PN +
Sbjct: 316 NINFSLANVRGVSALPKIIMLKEFFASSD--IDILLLTETFLSNIVPSSLFNAPNMSFLR 373
Query: 125 SYRND-----IRGGGVSIYVHNNIKHSTTED-----KYSNGNNYLWVYLEQHG------- 167
RN + GGGV++ +H + + T D Y + + +
Sbjct: 374 LDRNPELHSKVSGGGVAV-MHKSSLNITLRDINFETHYPKHRCEILAFDIHNAEPASSAS 432
Query: 168 --LHVGVVYKPG--STNTEDFLIDYEQQLHDRNRTIIFGDFNLDLLQ-EDKQTKMYKQML 222
L + ++Y+P S + LI + + +RTI+ GD N + + ++
Sbjct: 433 SPLSIFLIYRPPCCSVSENAALIAHLESYIPLSRTILAGDLNFPQINWSSANSSLHPFAS 492
Query: 223 CENGYKILNKVEEEYCTRETSTTRTILDHVTTNLKNKNVHLAIVESCM-SDHKQIYVAIK 281
+ + KV+ + TR ++++ ILD V + +HL+ + + SDH + I
Sbjct: 493 FLSSINLSQKVQ--FPTRLSASSSNILDLVACSADISILHLSPQPALLNSDHLSVSFKIP 550
Query: 282 KQQVISKQRSKYEAIDYSSL--YKKFDSSKLDNSNYEYKHLEDVIKQNIRENTKTKSKIL 339
I + + S + YKK + L+ + + E ++++ E IL
Sbjct: 551 ILSPIDSPCPTSQDSNSSPMFDYKKCNFPLLNRARVNWD-FEFCSQKSVSEKFDRLLSIL 609
Query: 340 N-LPQQDWITKNIT--DGINRRNKLWYKLKKDPNNEDLKANFKTERNQVTRDIQSAKRKY 396
N L TK+I+ + + + KLK+ N + ++ + QS RK
Sbjct: 610 NNLLTLHCPTKSISVSKSPSPYHNIHRKLKRLRNKISKLILSRKCTFEIIKTAQSKYRKL 669
Query: 397 YLDAFNKCSKK------PKKMWSLINTLATNKLKKKCLLPKIHSTEGRIIQEDHICEYFN 450
Y + F K ++ ++ I L ++LK + L+P I I+ + E F
Sbjct: 670 YRN-FRKYVRRFENDIIANSNFTKIRRLINSRLKSQNLVPSIILDNKSIVNDSEKSEIFA 728
Query: 451 KFFST 455
K F++
Sbjct: 729 KIFAS 733
>Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 33.5 bits (73), Expect = 0.38
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 182 EDFLIDYEQQLHDRNRT-IIFGDFNLDLLQEDKQTKMYKQMLCENGYKILNKVEEEYCTR 240
E + Y+ QL DR+ T IF + D + + + +C+ + +E+ CT+
Sbjct: 126 ESLMRKYQSQLADRSTTTFIFNCASEDYICKSSGLCLKPNKICDGKFDCDGGDDEKNCTK 185
Query: 241 ETSTTRTILDHVTT 254
+TT TI + ++T
Sbjct: 186 SNATTTTISNSLST 199
>Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 33.5 bits (73), Expect = 0.38
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 182 EDFLIDYEQQLHDRNRT-IIFGDFNLDLLQEDKQTKMYKQMLCENGYKILNKVEEEYCTR 240
E + Y+ QL DR+ T IF + D + + + +C+ + +E+ CT+
Sbjct: 126 ESLMRKYQSQLADRSTTTFIFNCASEDYICKSSGLCLKPNKICDGKFDCDGGDDEKNCTK 185
Query: 241 ETSTTRTILDHVTT 254
+TT TI + ++T
Sbjct: 186 SNATTTTISNSLST 199
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 33.5 bits (73), Expect = 0.38
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 274 KQIYVAIKKQQVISKQRSKYEAIDY---SSLYKKFDSSKLDNSNYEYKHLEDVIKQNIRE 330
KQI VAI ++ + +QR K + +Y + ++ + K N E + ED K+N +E
Sbjct: 188 KQIPVAISTREELQQQRHKQQLEEYEKRKEILRREEEIKQQNQEREKQINEDFEKRN-QE 246
Query: 331 NTKTKSKILNLPQQDWITKNITDGINRR--NKLWYKLKKDPNNEDLKANFKTERNQVTRD 388
K + +I Q+ K I D +R KL + + N + K + R
Sbjct: 247 KLKREEEIKQQNQER--EKQINDDFEKRKLEKLQREKLFEKNKQAKLQREKAHQESERRK 304
Query: 389 IQSAKRK 395
++ KR+
Sbjct: 305 LEKLKRE 311
>AF063007-1|AAC16430.2| 730|Caenorhabditis elegans Hypothetical
protein R119.1 protein.
Length = 730
Score = 32.7 bits (71), Expect = 0.66
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 297 DYSSLYKKFDSSKLDNS-NYEYKHLEDVIKQNIRENTKTKSKILNLPQQDWITKNITDGI 355
D++ +Y+ F+ LDN EY+ ++N+ ++ KT S I+ + + ++ K+ITD +
Sbjct: 539 DWNDIYQNFNRF-LDNLVPLEYRLYSPPKRENLTDHVKTISMIITMKKPNFKVKSITDLL 597
Query: 356 N 356
N
Sbjct: 598 N 598
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 31.5 bits (68), Expect = 1.5
Identities = 39/218 (17%), Positives = 90/218 (41%), Gaps = 14/218 (6%)
Query: 141 NNIKHSTTEDKYSNGNNYLW-VYLEQHGLHVGVVYKPGSTNTEDFLIDYEQQLHDRNRTI 199
NN H + + + N + + E+ LH +V K G E +I+ +++ + I
Sbjct: 40 NNESHEDLKKRVLDAENIIQDLRSERDALHETLVDKAGLN--ESVIIEQSKRVSTQETRI 97
Query: 200 IFGDFNLDLLQEDKQTKMYKQMLCENGYKILNKVEEEYCTRETSTTRTILDHVTTNLKNK 259
D NL L++D + + + +N L ++E++ + T L++
Sbjct: 98 YRRDVNL--LEDDLKHHQSQIRILQNKCSTL-EMEKQTLQETIQRAQDDKKETETELESS 154
Query: 260 NVHLAIVESCMSDHKQIYVAIKKQQVISKQRSKYEAIDYSSLYKKFDSSKLDNSNYEYKH 319
L ++E +S K + + ++ + + ++ +KL +N E K
Sbjct: 155 RSRLHVLEKELS--------AKANDIFMVTKDLHDKNEELTSFRMEYVTKLSEANREKKA 206
Query: 320 LEDVIKQNIRENTKTKSKILNLPQQDWITKNITDGINR 357
LE+ +++ + + K L L ++ T+N+ + +
Sbjct: 207 LEEKLEKYKNDMKENDRKSLELNKEQVTTQNVLSEVRQ 244
>AL032623-13|CAA21517.1| 147|Caenorhabditis elegans Hypothetical
protein Y43F8B.12 protein.
Length = 147
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 315 YEYKHLEDVIKQNIRENTKTKSKILNLPQQDWITKNITDGINRRNKLWYKLKKDPNNEDL 374
YE K+++ +KQNI ++ + I+ D I N+ + + KL K NE
Sbjct: 78 YELKNMKKKLKQNILKSVSEMNNIIKKADIDMINNNLKPFLKQMEKLPTKKTVTIGNESF 137
Query: 375 KAN 377
+ N
Sbjct: 138 EYN 140
>Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical
protein F08G12.5 protein.
Length = 185
Score = 30.3 bits (65), Expect = 3.5
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 367 KDPNNEDLKANFKTERNQVTRDIQSAKRKYYLDAFNKCSKKPKK-MWSLINTL-ATN-KL 423
++PN +R +++ IQ+ K LD+ N+ S++ +K + NTL A+N +L
Sbjct: 78 REPNRNSFHCPICRKRVSMSKVIQNYTLKNVLDSINELSREEEKSRRAYDNTLDASNEQL 137
Query: 424 KKKCL-LPKIHSTEGRIIQEDHICEYFN 450
+ KC+ L + + R I E EY+N
Sbjct: 138 RVKCIDLERKADSLKREINEMRRKEYYN 165
>U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical
protein T16A1.2 protein.
Length = 786
Score = 30.3 bits (65), Expect = 3.5
Identities = 43/196 (21%), Positives = 81/196 (41%), Gaps = 19/196 (9%)
Query: 341 LPQQDWITKNITDGINRRNKLWYKLKKDPNNEDLKANFKTERNQVTRDIQSAKRKYYLDA 400
LPQ+ + I IN +N + K+ +D+ N ++ +++ I S + + +
Sbjct: 386 LPQKLHLIGYIVQVINNKNGILDKI------DDISDNNSSDFKKISGLIMSLRHHFEILK 439
Query: 401 FNKCSKKPKKMWSLINTLA--TNKLKKKCLLPKIH-----STEGRIIQEDHICEYFNKFF 453
K+ +M N + + K K LL + S E I E +
Sbjct: 440 SGDMKKEITEMMKYQNAIPEIVSGTKGKSLLSWLKCQNNFSMESVDSAAKLIVEMSGTVY 499
Query: 454 STVGTTLADKIPQKFHGNHTHILPNNSV---TNVVLQNLNLCTPDEIEKHIDNLDPNTST 510
TVGTT+ D + +F T + + + ++L+ + T ++ +H+ NLD + T
Sbjct: 500 ETVGTTIYDTVEDRFDEVSTVVETTSGIVKNVRLLLKEIKNQTTTDL-RHLKNLDKYSKT 558
Query: 511 GIDGISAKTLKCLKNA 526
G + K L +K A
Sbjct: 559 --FGEAVKALVSIKKA 572
>Z78062-2|CAB01499.2| 689|Caenorhabditis elegans Hypothetical
protein F16D3.2 protein.
Length = 689
Score = 29.9 bits (64), Expect = 4.7
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 268 SCMSDHKQIYVAIKKQQVISKQRSKYEAI--DYSSLYKKFDSSKLDNSNYEYKHL--EDV 323
S +SD+ Q + + + +++RS+ +A D + L ++F+SS ++ + + DV
Sbjct: 259 SNISDYSQ-FSSDTNAESNTERRSRPDASSPDLADLARRFNSSSINVQPQPLESVASSDV 317
Query: 324 IKQNIRENTKTKSKILNLPQQDWITKNITDGINRRNKLWYKLKKDPNNEDLKANFK 379
+ + I + + K LN ++ + +N+ D I R+NK+ K ED + K
Sbjct: 318 LSKKIAKAVRKIMKKLNEGEKLSL-ENLFDEIERKNKILIPGKNGKEKEDFLKDLK 372
>AF026207-1|AAB71266.1| 522|Caenorhabditis elegans Hypothetical
protein H42K12.3 protein.
Length = 522
Score = 29.9 bits (64), Expect = 4.7
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 234 EEEYCTRETSTTRTILDHVTTNLK-----NKNVHLAIVESCMSDHKQIYVAIKKQQVISK 288
EEE T E TT T + TT ++H I + + + Y +KKQ+ + K
Sbjct: 291 EEEVTTTEAPTTTTTTEEPTTEASAPKRIKAHLHKKIKKHPKNFGSKTYEILKKQETVKK 350
Query: 289 QRSKYEAIDYSSLYK-KFDSSK 309
+ ++ I+ + + DSS+
Sbjct: 351 SKIEFPEIEEQEITEDSADSSR 372
>AF024500-2|AAB70360.1| 467|Caenorhabditis elegans Hypothetical
protein K06H6.4 protein.
Length = 467
Score = 29.9 bits (64), Expect = 4.7
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 317 YKHLEDVIKQNIRENTKTKSKILNLPQQDWITKNITDGINRRNKLWYKLKKDPNNEDLK 375
Y+ +E + E + LP + WI KN+T+ I R KL Y + E +K
Sbjct: 387 YRSVEQRVFPGALERMMKHAPFNILPVEQWIEKNLTENILSRVKLVYDIVDVTCEEKMK 445
>Z92828-5|CAB07332.2| 586|Caenorhabditis elegans Hypothetical
protein C37A5.9 protein.
Length = 586
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/76 (19%), Positives = 36/76 (47%)
Query: 265 IVESCMSDHKQIYVAIKKQQVISKQRSKYEAIDYSSLYKKFDSSKLDNSNYEYKHLEDVI 324
++E + ++ AI+ + ++ + ++ S+Y KF SS+ N KH I
Sbjct: 28 LIEYSSPQYLDLFFAIRAYERMALEGKPEKSQLSKSIYSKFLSSRTGNCEAIPKHFRAPI 87
Query: 325 KQNIRENTKTKSKILN 340
+ +R T+ + ++ +
Sbjct: 88 GEKLRHGTELEDRVFS 103
>Z75542-2|CAA99862.2| 712|Caenorhabditis elegans Hypothetical
protein F55D12.2 protein.
Length = 712
Score = 29.5 bits (63), Expect = 6.2
Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 6/138 (4%)
Query: 219 KQMLCENGYKILNKVEEEYCTRETSTTRTILDHVTTNLKNKNVHLAIVESCMSDHKQIYV 278
KQ+L + ++E T + ++N L +VES M+ H+Q+
Sbjct: 502 KQLLSMAKNSERSAMKESSTDERKEKLETAWKELNLAIQNNEQRLKVVESFMATHRQMME 561
Query: 279 AIKKQQVISKQRSKYEAIDYSSLYKKFDSSKLDNSNYEYKHLEDVIKQNIRENTKTKSKI 338
+ + + ++R + +S+ + +L N E ++ +++ I + T
Sbjct: 562 RVNEIEKSLRERLRVSG-KLNSIVLSTERKRLKNDIEELSNIGNMLSAQINADHAT---- 616
Query: 339 LNLPQQDWITKNITDGIN 356
L + K I+D IN
Sbjct: 617 -TLQDRQTAVKQISDKIN 633
>CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical
protein C42C1.7 protein.
Length = 710
Score = 29.5 bits (63), Expect = 6.2
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 366 KKDPNNEDLKANFKTERNQVTRDIQSAKRK-YYLDAFNKCSKKPKKMWS--LINTLATNK 422
+K+ N + + +K RNQ+ + I + K+K + LDAF + + + + L N + N+
Sbjct: 568 EKNDTNLEKDSTYKEMRNQMNQFIPNIKKKLFVLDAFPRTNNQYTLQLAKDLKNGIDINE 627
Query: 423 LKKKCLLP 430
+ KK + P
Sbjct: 628 IHKKIVQP 635
>AY594354-1|AAT01444.1| 539|Caenorhabditis elegans
cofactor-independent phosphoglyceratemutase protein.
Length = 539
Score = 29.5 bits (63), Expect = 6.2
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 130 IRGGGVSIYVHNN-IKHSTTE--DKYSNGNNYLWVYLEQHGLHVGV 172
I G GVS + N I ++ T DK +GN W +E HGLHVG+
Sbjct: 36 IDGWGVSEDPYGNAILNAQTPVMDKLCSGN---WAQIEAHGLHVGL 78
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.5 bits (63), Expect = 6.2
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 281 KKQQVISKQRSKYEAIDYSSLYKKFDSSKLDNSNYEYKHLEDVIKQNIRENTKTKSKI-- 338
K+++ KQ+ + E S +K SKL+ + E+ + +E T+ SK
Sbjct: 9358 KQKETDEKQKLEAEIAGKKSTEQK---SKLEAEAKLKRAAEEDAAKKQKEKTEAASKKAA 9414
Query: 339 ---LNLPQQDWITKNI-TDGINRRNKLWYKLKKDPNNEDLKANFKTERNQVTRDIQSAKR 394
L L +Q I K D + ++N+L + K + + K E + Q+A+
Sbjct: 9415 AEKLELEKQAQINKAAEADAVKKQNELDEQNKLEATKKLAAEKLKLEEQSAAKSKQAAEE 9474
Query: 395 KYYLDAFNKCSKKPKKMWSLINTLATNK 422
+ LDA K +K +K L +NK
Sbjct: 9475 QAKLDAQTK-AKAAEKQTGLEKDEKSNK 9501
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 6.2
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 281 KKQQVISKQRSKYEAIDYSSLYKKFDSSKLDNSNYEYKHLEDVIKQNIRENTKTKSKI-- 338
K+++ KQ+ + E S +K SKL+ + E+ + +E T+ SK
Sbjct: 9378 KQKETDEKQKLEAEIAGKKSTEQK---SKLEAEAKLKRAAEEDAAKKQKEKTEAASKKAA 9434
Query: 339 ---LNLPQQDWITKNI-TDGINRRNKLWYKLKKDPNNEDLKANFKTERNQVTRDIQSAKR 394
L L +Q I K D + ++N+L + K + + K E + Q+A+
Sbjct: 9435 AEKLELEKQAQINKAAEADAVKKQNELDEQNKLEATKKLAAEKLKLEEQSAAKSKQAAEE 9494
Query: 395 KYYLDAFNKCSKKPKKMWSLINTLATNK 422
+ LDA K +K +K L +NK
Sbjct: 9495 QAKLDAQTK-AKAAEKQTGLEKDEKSNK 9521
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 6.2
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 281 KKQQVISKQRSKYEAIDYSSLYKKFDSSKLDNSNYEYKHLEDVIKQNIRENTKTKSKI-- 338
K+++ KQ+ + E S +K SKL+ + E+ + +E T+ SK
Sbjct: 9378 KQKETDEKQKLEAEIAGKKSTEQK---SKLEAEAKLKRAAEEDAAKKQKEKTEAASKKAA 9434
Query: 339 ---LNLPQQDWITKNI-TDGINRRNKLWYKLKKDPNNEDLKANFKTERNQVTRDIQSAKR 394
L L +Q I K D + ++N+L + K + + K E + Q+A+
Sbjct: 9435 AEKLELEKQAQINKAAEADAVKKQNELDEQNKLEATKKLAAEKLKLEEQSAAKSKQAAEE 9494
Query: 395 KYYLDAFNKCSKKPKKMWSLINTLATNK 422
+ LDA K +K +K L +NK
Sbjct: 9495 QAKLDAQTK-AKAAEKQTGLEKDEKSNK 9521
>AF468834-1|AAL77082.1| 586|Caenorhabditis elegans PRY-1 protein.
Length = 586
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/76 (19%), Positives = 36/76 (47%)
Query: 265 IVESCMSDHKQIYVAIKKQQVISKQRSKYEAIDYSSLYKKFDSSKLDNSNYEYKHLEDVI 324
++E + ++ AI+ + ++ + ++ S+Y KF SS+ N KH I
Sbjct: 28 LIEYSSPQYLDLFFAIRAYERMALEGKPEKSQLSKSIYSKFLSSRTGNCEAIPKHFRAPI 87
Query: 325 KQNIRENTKTKSKILN 340
+ +R T+ + ++ +
Sbjct: 88 GEKLRHGTELEDRVFS 103
>AF043695-18|AAB97548.2| 710|Caenorhabditis elegans Hypothetical
protein C42C1.7 protein.
Length = 710
Score = 29.5 bits (63), Expect = 6.2
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 366 KKDPNNEDLKANFKTERNQVTRDIQSAKRK-YYLDAFNKCSKKPKKMWS--LINTLATNK 422
+K+ N + + +K RNQ+ + I + K+K + LDAF + + + + L N + N+
Sbjct: 568 EKNDTNLEKDSTYKEMRNQMNQFIPNIKKKLFVLDAFPRTNNQYTLQLAKDLKNGIDINE 627
Query: 423 LKKKCLLP 430
+ KK + P
Sbjct: 628 IHKKIVQP 635
>AF039713-12|AAO12419.1| 521|Caenorhabditis elegans Hypothetical
protein F57B10.3b protein.
Length = 521
Score = 29.5 bits (63), Expect = 6.2
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 130 IRGGGVSIYVHNN-IKHSTTE--DKYSNGNNYLWVYLEQHGLHVGV 172
I G GVS + N I ++ T DK +GN W +E HGLHVG+
Sbjct: 18 IDGWGVSEDPYGNAILNAQTPVMDKLCSGN---WAQIEAHGLHVGL 60
>AF039713-11|AAB96720.1| 539|Caenorhabditis elegans Hypothetical
protein F57B10.3a protein.
Length = 539
Score = 29.5 bits (63), Expect = 6.2
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 130 IRGGGVSIYVHNN-IKHSTTE--DKYSNGNNYLWVYLEQHGLHVGV 172
I G GVS + N I ++ T DK +GN W +E HGLHVG+
Sbjct: 36 IDGWGVSEDPYGNAILNAQTPVMDKLCSGN---WAQIEAHGLHVGL 78
>AB069909-1|BAB62876.1| 747|Caenorhabditis elegans junctophilin
protein.
Length = 747
Score = 29.5 bits (63), Expect = 6.2
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 12/70 (17%)
Query: 450 NKFFSTVGTTLADKIPQKFHGNHTHILPNNSVTNVVLQ--------NLNLCTP----DEI 497
+ F T+ +A+ + H H++PN++ +V N L TP D +
Sbjct: 459 HSFEQTLSVDMAEDMTPPSKAYHNHVMPNSNTNHVNFMPQYGYSDPNSQLQTPINSQDLL 518
Query: 498 EKHIDNLDPN 507
+ HI NLDP+
Sbjct: 519 QPHIPNLDPS 528
>Z81587-3|CAB04700.1| 362|Caenorhabditis elegans Hypothetical
protein T06G6.4 protein.
Length = 362
Score = 29.1 bits (62), Expect = 8.2
Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 231 NKVEEEYCTRETSTTRTILDHVTTNLKNKNVHLAIVESCMSDHKQIYVAIKKQQVISKQR 290
+K E+ + S T +LD +T +L++K L I++ +SD Q + S +
Sbjct: 131 SKETEDKLRVDLSKTIGVLDFLTRDLESKGKSLEILQKKVSDLTQRNDTVGFTSYFSYE- 189
Query: 291 SKYEAIDYSSLYKKFDSSKLDNSNYEYK---------HLEDVIKQNIRE-NTKTKSKILN 340
KY + + K+ + ++ E ++ED ++ I++ + LN
Sbjct: 190 -KYSCVFNKKIAKQKEKGEMKKQIQELTEKVEKKGAGNIEDQLQAKIKDLEDVLRQMTLN 248
Query: 341 LPQQDWITKNITDGINRRNK 360
L ++ +K D ++RR+K
Sbjct: 249 LTKEQAKSKATCDKLHRRSK 268
>Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical
protein T08D10.2 protein.
Length = 737
Score = 29.1 bits (62), Expect = 8.2
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 293 YEAIDYSSL--YKKFDSSKLDNSNYEYKHLEDVIKQNIRENTKTKSKILNLPQQD 345
+ I+ S+L Y F K+ N N E KHL +V+K N + K+ N P D
Sbjct: 312 FNMIERSTLLSYYNFAKEKV-NLNAERKHLYEVLKTNRLTALLAEQKLKNTPPSD 365
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 29.1 bits (62), Expect = 8.2
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 308 SKLDNSNYEYKHLEDVIKQNIRENTKTKSKILNLPQQDWITKNITDGINRRNKLWYKLKK 367
SKL Y Y LE + E K ++ LN+ Q + K++ R+ L +L+K
Sbjct: 156 SKLQQIEYSYARLEKEYEYLANERKKQENLELNVIIQ--LEKSVKKLTIERDDLQMRLEK 213
Query: 368 DPNNEDLKANFKTERNQVTRDIQSAK--RKYYLDAFNKCSKKPKKMWSLINTLATN---- 421
+ AN Q +++ + K +K ++A N+ ++ + +++ N
Sbjct: 214 ASTEPTMVANLMLNEIQQRQELFACKERQKMEIEAQNQTLEEQRNHIAMLEKALANSQER 273
Query: 422 --KLKKKC 427
K +KKC
Sbjct: 274 LAKREKKC 281
>U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical
protein C33H5.8 protein.
Length = 297
Score = 29.1 bits (62), Expect = 8.2
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 357 RRNKLWYKLKKDPNNEDLKANFKTERNQVTRDIQSAKRKYYLDAFNKCSK 406
R K +K DPN E + K ++N D+ S +R YL + K +K
Sbjct: 96 RDMKTCFKYSNDPNMERQANDLKGKKNVQVIDLPSIERDEYLQSDEKFTK 145
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.132 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,419,421
Number of Sequences: 27539
Number of extensions: 662847
Number of successful extensions: 2122
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2111
Number of HSP's gapped (non-prelim): 33
length of query: 534
length of database: 12,573,161
effective HSP length: 85
effective length of query: 449
effective length of database: 10,232,346
effective search space: 4594323354
effective search space used: 4594323354
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -