Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001501-TA|BGIBMGA001501-PA|IPR001377|Ribosomal protein
S6e
         (253 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    24   4.9  
AF457564-1|AAL68794.1|   91|Anopheles gambiae hypothetical prote...    24   4.9  

>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 114 VRKGAQEIPGLTDGTVPRRLGPKRASKIRKLFNLSK 149
           V  GAQ++ G   G  P  + PK    IR     SK
Sbjct: 199 VYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSK 234


>AF457564-1|AAL68794.1|   91|Anopheles gambiae hypothetical protein
           17 protein.
          Length = 91

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 109 LALVIVRKGAQEIPGLTDGTVPRRLGPKRAS 139
           L L I   GA  +PG T  T+  R   KRA+
Sbjct: 34  LLLFIAPTGADPLPGQTQRTLGYRGNDKRAT 64


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.135    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,725
Number of Sequences: 2123
Number of extensions: 7303
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 2
length of query: 253
length of database: 516,269
effective HSP length: 63
effective length of query: 190
effective length of database: 382,520
effective search space: 72678800
effective search space used: 72678800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)