GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001500-TA|BGIBMGA001500-PA|IPR002171|Ribosomal protein
L2, IPR008991|Translation protein SH3-like, IPR008994|Nucleic
acid-binding, OB-fold
         (280 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    25   1.8  
AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive ...    23   7.4  

>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
           protein.
          Length = 700

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 50  NLAGRDPETGRVVAXXXXXXXXHKYHWIDWYRVGPTEGPP 89
           N    D E  + +A        + +HW  W+ V P  GPP
Sbjct: 198 NYTATDAEPEQRMAFFREDIGVNLHHW-HWHLVYPASGPP 236


>AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR9 protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 6/45 (13%)

Query: 166 KEPGQGGLYIHAAGTSGTIVRKQDDRV--IVQMPSKRLFSFNQLC 208
           K PG GG Y    G  GT    Q D+V    Q P  +  S  Q C
Sbjct: 11  KHPGTGGGYNQGGGVKGT----QPDKVGTGTQNPLDKTVSVPQKC 51


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.138    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,073
Number of Sequences: 2123
Number of extensions: 13282
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 2
length of query: 280
length of database: 516,269
effective HSP length: 63
effective length of query: 217
effective length of database: 382,520
effective search space: 83006840
effective search space used: 83006840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)