Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001500-TA|BGIBMGA001500-PA|IPR002171|Ribosomal protein
L2, IPR008991|Translation protein SH3-like, IPR008994|Nucleic
acid-binding, OB-fold
(280 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 217 3e-56
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 217 3e-56
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 204 2e-52
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 194 4e-49
AB051617-1|BAB54945.1| 56|Homo sapiens mitochondrial ribosomal... 56 1e-07
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 46 1e-04
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 46 1e-04
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 46 1e-04
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 46 1e-04
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 46 1e-04
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 46 1e-04
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 46 1e-04
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 46 1e-04
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 46 2e-04
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 40 0.013
BC035314-1|AAH35314.1| 306|Homo sapiens brix domain containing ... 33 1.1
AL357515-8|CAH73396.1| 208|Homo sapiens brix domain containing ... 33 1.1
AL357515-7|CAH73395.1| 214|Homo sapiens brix domain containing ... 33 1.1
AL357515-6|CAH73394.1| 306|Homo sapiens brix domain containing ... 33 1.1
AK024740-1|BAB14983.1| 253|Homo sapiens protein ( Homo sapiens ... 33 1.1
AB209096-1|BAD92333.1| 580|Homo sapiens G protein-coupled recep... 31 5.9
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 217 bits (531), Expect = 3e-56
Identities = 109/224 (48%), Positives = 144/224 (64%), Gaps = 3/224 (1%)
Query: 40 QYTVKPLEVTNLAGRDPETGRVVAXXXXXXXXHKYHWIDWYRVGP--TEGPPQEEKVIQI 97
+YT+ P+++ GRD TGR+ +Y ID+ R P T+ P EEKVIQ+
Sbjct: 71 KYTITPVKMRKSGGRD-HTGRIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKVIQV 129
Query: 98 IEDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLPRIPVRANEGDAYVLGALPI 157
D CR+A +ALVA G + ++I+ATENM+AGD I S + R+ V A EGDA+ LGALP+
Sbjct: 130 RYDPCRSADIALVAGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPV 189
Query: 158 GTIVHCVEKEPGQGGLYIHAAGTSGTIVRKQDDRVIVQMPSKRLFSFNQLCMAVVGRLSN 217
GT+++ VE EPG+G YI AAGT G ++RK + I+Q+PSKR + C+A VGR+SN
Sbjct: 190 GTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCVATVGRVSN 249
Query: 218 VLHGSTPIGSPQRNRWLGNRPRSGLWQRKSGRHGRKIKPPKPVK 261
V H IG RNRWLG RP SG W RK G GRKI+P P+K
Sbjct: 250 VDHNKRVIGKAGRNRWLGKRPNSGRWHRKGGWAGRKIRPLPPMK 293
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 217 bits (531), Expect = 3e-56
Identities = 109/224 (48%), Positives = 144/224 (64%), Gaps = 3/224 (1%)
Query: 40 QYTVKPLEVTNLAGRDPETGRVVAXXXXXXXXHKYHWIDWYRVGP--TEGPPQEEKVIQI 97
+YT+ P+++ GRD TGR+ +Y ID+ R P T+ P EEKVIQ+
Sbjct: 71 KYTITPVKMRKSGGRD-HTGRIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKVIQV 129
Query: 98 IEDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLPRIPVRANEGDAYVLGALPI 157
D CR+A +ALVA G + ++I+ATENM+AGD I S + R+ V A EGDA+ LGALP+
Sbjct: 130 RYDPCRSADIALVAGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPV 189
Query: 158 GTIVHCVEKEPGQGGLYIHAAGTSGTIVRKQDDRVIVQMPSKRLFSFNQLCMAVVGRLSN 217
GT+++ VE EPG+G YI AAGT G ++RK + I+Q+PSKR + C+A VGR+SN
Sbjct: 190 GTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCVATVGRVSN 249
Query: 218 VLHGSTPIGSPQRNRWLGNRPRSGLWQRKSGRHGRKIKPPKPVK 261
V H IG RNRWLG RP SG W RK G GRKI+P P+K
Sbjct: 250 VDHNKRVIGKAGRNRWLGKRPNSGRWHRKGGWAGRKIRPLPPMK 293
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6. ).
Length = 302
Score = 204 bits (499), Expect = 2e-52
Identities = 106/224 (47%), Positives = 141/224 (62%), Gaps = 6/224 (2%)
Query: 40 QYTVKPLEVTNLAGRDPETGRVVAXXXXXXXXHKYHWIDWYRVGP--TEGPPQEEKVIQI 97
+YT+ P+++ GRD TGR+ +Y ID+ R P T+ P EEKVIQ+
Sbjct: 71 KYTITPVKMRKSGGRD-HTGRIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKVIQV 129
Query: 98 IEDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLPRIPVRANEGDAYVLGALPI 157
D + +ALVA G + ++I+ATENM+AGD I S + R+ V A EGDA+ LGALP+
Sbjct: 130 RYD---PSDIALVAGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPV 186
Query: 158 GTIVHCVEKEPGQGGLYIHAAGTSGTIVRKQDDRVIVQMPSKRLFSFNQLCMAVVGRLSN 217
GT+++ VE EPG+G YI AAGT G ++RK + I+Q+PSKR + C+A VGR+SN
Sbjct: 187 GTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCVATVGRVSN 246
Query: 218 VLHGSTPIGSPQRNRWLGNRPRSGLWQRKSGRHGRKIKPPKPVK 261
V H IG RNRWLG RP SG W RK G GRKI+P P+K
Sbjct: 247 VDHNKRVIGKAGRNRWLGKRPNSGRWHRKGGWAGRKIRPLPPMK 290
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 194 bits (472), Expect = 4e-49
Identities = 98/204 (48%), Positives = 131/204 (64%), Gaps = 3/204 (1%)
Query: 40 QYTVKPLEVTNLAGRDPETGRVVAXXXXXXXXHKYHWIDWYRVGP--TEGPPQEEKVIQI 97
+YT+ P+++ GRD TGR+ +Y ID+ R P T+ P EEKVIQ+
Sbjct: 71 KYTITPVKMRKSGGRD-HTGRIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKVIQV 129
Query: 98 IEDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLPRIPVRANEGDAYVLGALPI 157
D CR+A +ALVA G + ++I+ATENM+AGD I S + R+ V A EGDA+ LGALP+
Sbjct: 130 RYDPCRSADIALVAGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPV 189
Query: 158 GTIVHCVEKEPGQGGLYIHAAGTSGTIVRKQDDRVIVQMPSKRLFSFNQLCMAVVGRLSN 217
GT+++ VE EPG+G YI AAGT G ++RK + I+Q+PSKR + C+A VGR+SN
Sbjct: 190 GTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGHSIIQLPSKRQMQVLETCVATVGRVSN 249
Query: 218 VLHGSTPIGSPQRNRWLGNRPRSG 241
V H IG RNRWLG RP SG
Sbjct: 250 VDHNKRVIGKAGRNRWLGKRPNSG 273
>AB051617-1|BAB54945.1| 56|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 56
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/42 (57%), Positives = 26/42 (61%)
Query: 220 HGSTPIGSPQRNRWLGNRPRSGLWQRKSGRHGRKIKPPKPVK 261
H IG RNRWLG RP SG W RK G GRKI+P P+K
Sbjct: 3 HNKRVIGKAGRNRWLGKRPNSGRWHRKGGWAGRKIRPLPPMK 44
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 46.4 bits (105), Expect = 1e-04
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 94 VIQIIEDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 152
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPV 104
Query: 153 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 210
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 211 VVG 213
VVG
Sbjct: 165 VVG 167
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 46.4 bits (105), Expect = 1e-04
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 94 VIQIIEDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 152
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPV 104
Query: 153 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 210
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 211 VVG 213
VVG
Sbjct: 165 VVG 167
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 46.4 bits (105), Expect = 1e-04
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 94 VIQIIEDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 152
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPV 104
Query: 153 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 210
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 211 VVG 213
VVG
Sbjct: 165 VVG 167
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 94 VIQIIEDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 152
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 153 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 210
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 211 VVG 213
VVG
Sbjct: 165 VVG 167
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 94 VIQIIEDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 152
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 153 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 210
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 211 VVG 213
VVG
Sbjct: 165 VVG 167
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 94 VIQIIEDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 152
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 153 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 210
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 211 VVG 213
VVG
Sbjct: 165 VVG 167
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 94 VIQIIEDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 152
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 153 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 210
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 211 VVG 213
VVG
Sbjct: 165 VVG 167
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 94 VIQIIEDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 152
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 153 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 210
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 211 VVG 213
VVG
Sbjct: 165 VVG 167
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 45.6 bits (103), Expect = 2e-04
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 97 IIEDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVLGAL 155
II D R A +A V D ++ TE A + I T + + N G+ +G +
Sbjct: 2 IIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTM 61
Query: 156 PIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMAVVG 213
P GTIV C+E++PG G A+G T++ + + V++PS + AVVG
Sbjct: 62 PEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVG 121
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 39.5 bits (88), Expect = 0.013
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 94 VIQIIEDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 152
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 41 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 100
Query: 153 GALPIGTIVHCVEKEPGQGGLYIHAAG 179
G +P GTIV C+E++PG G A+G
Sbjct: 101 GTMPEGTIVCCLEEKPGDRGKLARASG 127
>BC035314-1|AAH35314.1| 306|Homo sapiens brix domain containing 1
protein.
Length = 306
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 99 EDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLPR 139
+ GCRT + L +G L +L ++ + D+ K S K+P+
Sbjct: 204 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 244
>AL357515-8|CAH73396.1| 208|Homo sapiens brix domain containing 1
protein.
Length = 208
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 99 EDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLPR 139
+ GCRT + L +G L +L ++ + D+ K S K+P+
Sbjct: 165 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 205
>AL357515-7|CAH73395.1| 214|Homo sapiens brix domain containing 1
protein.
Length = 214
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 99 EDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLPR 139
+ GCRT + L +G L +L ++ + D+ K S K+P+
Sbjct: 171 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 211
>AL357515-6|CAH73394.1| 306|Homo sapiens brix domain containing 1
protein.
Length = 306
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 99 EDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLPR 139
+ GCRT + L +G L +L ++ + D+ K S K+P+
Sbjct: 204 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 244
>AK024740-1|BAB14983.1| 253|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21087 fis, clone CAS03323. ).
Length = 253
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 99 EDGCRTAHVALVAVGDQLKYILATENMKAGDIIKTSCKLPR 139
+ GCRT + L +G L +L ++ + D+ K S K+P+
Sbjct: 204 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 244
>AB209096-1|BAD92333.1| 580|Homo sapiens G protein-coupled receptor
61 variant protein.
Length = 580
Score = 30.7 bits (66), Expect = 5.9
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 173 LYIHAAGTSGTIVRKQDDRVIVQMPSKRLFSFNQLCMAVVGRLSNVLHGSTPIGSPQRNR 232
L + A + T +K D+ +I+Q+P L + L + + GS +GSP + R
Sbjct: 50 LAVTKADPAATSGQKGDELLILQLPGLALCTQTNLPKRLQWEVPPTKPGSLGLGSPSQGR 109
Query: 233 W--LGNRP 238
W +G+ P
Sbjct: 110 WTRMGDGP 117
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.138 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,844,764
Number of Sequences: 224733
Number of extensions: 2045542
Number of successful extensions: 4168
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4142
Number of HSP's gapped (non-prelim): 21
length of query: 280
length of database: 73,234,838
effective HSP length: 89
effective length of query: 191
effective length of database: 53,233,601
effective search space: 10167617791
effective search space used: 10167617791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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