Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001499-TA|BGIBMGA001499-PA|undefined
         (295 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       28   0.11 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    27   0.15 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    26   0.46 
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    25   1.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   4.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.9  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 199 SSNDRHSPSRESSPSLTVPENEESNELTWACED 231
           ++ND  S  +++S S T+ E+E ++E  W C D
Sbjct: 38  NNNDDWSVGKKNSNSGTINESEFNDENYWQCND 70


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 8/61 (13%)

Query: 193 SENASCSSNDRHSPS--RESSPSLTVPE-----NEESNELTWAC-EDPQKMSQFSLFPDS 244
           S+  S S  DR SPS  R  SPSL   +     N+E ++    C +D +K++Q  +  D+
Sbjct: 25  SKRFSSSIVDRRSPSSSRSPSPSLLTSQPHQDHNKEKSKNNHHCNQDTEKLNQLEIESDN 84

Query: 245 S 245
           S
Sbjct: 85  S 85


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 165 QNIENEGILMAISAHGLQNQNTSSDINNSENASCSSND 202
           QN E E  +   ++  L NQ  S +  N+EN SC+ +D
Sbjct: 161 QNKEEEQTINRKNSDYLDNQEVSME--NTENKSCTDSD 196


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 7/60 (11%)

Query: 147 NSRFVALDVAELV-NESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHS 205
           N R +  +V EL+ N     N +N+ I          NQN ++  NN +NA+   N+  +
Sbjct: 397 NFRILGANVKELIRNTHCVNNNQNDNI------QNTNNQNDNNQKNNKKNANNQKNNNQN 450


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 161 ESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCS 199
           +S    +EN   ++   A    N +TSS+ +  E A+ S
Sbjct: 733 DSLSPRVENRSAIVHSEASANANSSTSSEESREEKATTS 771


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 187 SSDINNSENASCSSNDRHSPSRESSPSLTVPENEE 221
           + D   S ++  + N+R +P   + PSL   E  E
Sbjct: 247 ADDAEESVSSETNHNERSTPRSHAKPSLIDDEPTE 281


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 158 LVNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSN 201
           +V E+  +N  N  I    +     N N +++ NN+ N   + N
Sbjct: 214 VVLETCQRNSNNSTITAGNANTNASNNNNNNNNNNNNNNGANDN 257


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.307    0.125    0.346 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,967
Number of Sequences: 429
Number of extensions: 3188
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 7
length of query: 295
length of database: 140,377
effective HSP length: 57
effective length of query: 238
effective length of database: 115,924
effective search space: 27589912
effective search space used: 27589912
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 43 (21.4 bits)