GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001499-TA|BGIBMGA001499-PA|undefined
         (295 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    29   0.055
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    29   0.055
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    29   0.055
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    27   0.13 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    27   0.13 
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    21   8.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.3  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 28.7 bits (61), Expect = 0.055
 Identities = 18/51 (35%), Positives = 24/51 (47%)

Query: 176 ISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNELT 226
           IS+    N NT S  NN+ N + +SN   S    S     + E+  SNE T
Sbjct: 121 ISSTRGNNNNTPSATNNNTNFNNNSNGASSVGSSSPFDKLIEEDSRSNEDT 171


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 0.055
 Identities = 18/51 (35%), Positives = 24/51 (47%)

Query: 176 ISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNELT 226
           IS+    N NT S  NN+ N + +SN   S    S     + E+  SNE T
Sbjct: 69  ISSTRGNNNNTPSATNNNTNFNNNSNGASSVGSSSPFDKLIEEDSRSNEDT 119


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 28.7 bits (61), Expect = 0.055
 Identities = 18/51 (35%), Positives = 24/51 (47%)

Query: 176 ISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNELT 226
           IS+    N NT S  NN+ N + +SN   S    S     + E+  SNE T
Sbjct: 252 ISSTRGNNNNTPSATNNNTNFNNNSNGASSVGSSSPFDKLIEEDSRSNEDT 302


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 130 NSILESREYVSLLTAVRNSRFVALDVAELVNESPGQNIENEGILMAISAHGLQNQNTSS 188
           N I E +++ S  +     R   LD+  L  +S G NI++EGI   +     +  +T+S
Sbjct: 247 NVIAERKKHFSSSSYSSRKRLAMLDLL-LKYKSEGANIDDEGIREEVDTFMFEGHDTTS 304


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 130 NSILESREYVSLLTAVRNSRFVALDVAELVNESPGQNIENEGILMAISAHGLQNQNTSS 188
           N I E +++ S  +     R   LD+  L  +S G NI++EGI   +     +  +T+S
Sbjct: 247 NVIAERKKHFSSSSYSSRKRLAMLDLL-LKYKSEGANIDDEGIREEVDTFMFEGHDTTS 304


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 266 LGDNHFEFLDAAIMFAIQSKGLTTLGSEYG 295
           +GD   EF D  +      +GLT + + YG
Sbjct: 37  IGDVDLEFWDLDLNAQNHPRGLTIIQNGYG 66


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query: 29  KKARFAWQVKGKYHLKNE 46
           K A F  ++  KY LKNE
Sbjct: 347 KTATFVHEIWNKYALKNE 364


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query: 29  KKARFAWQVKGKYHLKNE 46
           K A F  ++  KY LKNE
Sbjct: 303 KTATFVHEIWNKYALKNE 320


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.307    0.125    0.346 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,824
Number of Sequences: 317
Number of extensions: 2554
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 8
length of query: 295
length of database: 114,650
effective HSP length: 56
effective length of query: 239
effective length of database: 96,898
effective search space: 23158622
effective search space used: 23158622
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 43 (21.4 bits)