SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001499-TA|BGIBMGA001499-PA|undefined
         (295 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi...    34   0.028
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p...    31   0.26 
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa...    30   0.34 
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||...    30   0.34 
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc...    30   0.46 
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|...    29   1.1  
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo...    29   1.1  
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo...    29   1.1  
SPBC577.15c |||NASP family histone binding protein|Schizosacchar...    29   1.1  
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom...    28   1.4  
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc...    27   2.4  
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos...    27   2.4  
SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces ...    27   2.4  
SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe...    27   2.4  
SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces pomb...    27   3.2  
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc...    27   3.2  
SPCC31H12.03c |||transcriptional regulator|Schizosaccharomyces p...    27   3.2  
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces...    27   3.2  
SPCC645.13 |||transcription elongation regulator|Schizosaccharom...    27   3.2  
SPBC3B9.14c |mrpl3||mitochondrial ribosomal protein subunit L3|S...    26   5.6  
SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces pomb...    26   5.6  
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M...    26   5.6  
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc...    26   5.6  
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po...    26   7.4  
SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyce...    26   7.4  
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|...    26   7.4  
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p...    26   7.4  
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy...    26   7.4  
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1...    26   7.4  
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb...    25   9.8  
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo...    25   9.8  
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1...    25   9.8  
SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 2||...    25   9.8  
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos...    25   9.8  
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom...    25   9.8  

>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 374

 Score = 33.9 bits (74), Expect = 0.028
 Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 7/138 (5%)

Query: 112 GKLQYPRYMT-KGFVDNTVNSILESREYVSLLTAVRNSRFVALDVAELVNESPGQNIENE 170
           G L +  Y+T  G +  TV+S       VS  T+  +S   +   +     SP  +  + 
Sbjct: 109 GDLYWSVYLTGNGVLQTTVSS-----SSVSSTTSSSSSSSPSSS-STTTTTSPSSSSSSS 162

Query: 171 GILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNELTWACE 230
               + S+    + ++SS  ++S ++S SS+   S S  SS S +VP    ++    +  
Sbjct: 163 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSS 222

Query: 231 DPQKMSQFSLFPDSSISY 248
                S  S  P SS S+
Sbjct: 223 SSSSSSSSSSRPSSSSSF 240


>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 932

 Score = 30.7 bits (66), Expect = 0.26
 Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 9/67 (13%)

Query: 92  ESVITDSEKSLLTPSTSVSNGKLQYPRYMTKGFVDNTVNSILESREYVSLL---TAVRN- 147
           E ++ +   SL+  STS+SN   + PRY T     N V+S+   ++YV  +   T+ +N 
Sbjct: 563 EGLLKNYYSSLIDSSTSISNINFEAPRYKT-----NIVHSLNNEQKYVLEVKNGTSEKNP 617

Query: 148 SRFVALD 154
           +R VAL+
Sbjct: 618 TRIVALE 624


>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1628

 Score = 30.3 bits (65), Expect = 0.34
 Identities = 19/67 (28%), Positives = 29/67 (43%)

Query: 168  ENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNELTW 227
            +N  I  A  ++G    N S D +   +   +SN R   S   SPS    E+E  N    
Sbjct: 1534 QNNAISRAGRSNGSNRGNDSRDADGRRSTHYASNKRPRSSDSQSPSNLREEDERENSRRR 1593

Query: 228  ACEDPQK 234
            A +D ++
Sbjct: 1594 ARQDDRR 1600


>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 3971

 Score = 30.3 bits (65), Expect = 0.34
 Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 12/158 (7%)

Query: 93   SVITDSEKSLLTPSTSVSNGKLQYPRYMTKGFVDNTVNSILESREYVSLLTAVRNSRFVA 152
            S I+D+ KS  T + S S+G+  +  + T   + NTV+         S  ++   S    
Sbjct: 3690 SSISDT-KSPATVTISSSSGQFTHSTFSTGSTMHNTVSHA------TSTSSSFTTSHLPT 3742

Query: 153  LDVAELVNESPGQNIENEGIL-MAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESS 211
              +A   + S      + G+  ++  +  L    +SS      ++S    +  +PSR +S
Sbjct: 3743 NTLASTFDNSQSIFSSSSGVPGLSTKSSSLGKIGSSSISLTLSSSSIRDAELPTPSRMTS 3802

Query: 212  PSL--TVPENEESNELTWACEDPQKMSQFSLFPDSSIS 247
            PSL  T+P++   +E   +  +P  +S   L  DS+I+
Sbjct: 3803 PSLSETIPQSSSISEA--STSNPNILSSTVLSFDSTIT 3838


>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1428

 Score = 29.9 bits (64), Expect = 0.46
 Identities = 13/46 (28%), Positives = 28/46 (60%)

Query: 165 QNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRES 210
           Q +ENE I+  I  +G+Q  + S+D ++ ++ + S ++  SP  ++
Sbjct: 364 QKLENERIVEEIKKNGIQEDSQSTDDSSKDDDNNSESNDMSPHNDA 409


>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 699

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 6/131 (4%)

Query: 85  NQDFNTIESVITDSEKSLLTPSTSVSNGKL-QYPRYMTKGFVDNTVNSILE--SREYVSL 141
           + D  T ES I++S+ + L+ S  V   K         KGF+    N++    +    S 
Sbjct: 189 HSDSKTYESPISNSQAASLSDSDMVQQIKNGSKTSLFKKGFLFKKNNAMQNRTTSNIKSN 248

Query: 142 LTAVRNSRFVALDVAE--LVNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCS 199
            +A+  ++   L+      +NE+  Q+ +NE +   +  H       + + N   N S S
Sbjct: 249 ASAIEKNKETILNALNNSTLNENGHQDTQNEVLRDIVLEHPTAKAQDTGESNKDNNTSTS 308

Query: 200 SNDRHSPSRES 210
            + +  P R S
Sbjct: 309 KHKKR-PKRLS 318


>SPCC1739.11c |cdc11||SIN component scaffold protein
           Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1045

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 182 QNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNELTWACEDP 232
           Q+   S+ ++  +N   +SN   S S  SSPSL  P N    +L     DP
Sbjct: 170 QSNTRSNSVHEKQNTDHASNASSSSSVVSSPSLK-PNNTSPLKLFQGASDP 219


>SPBC215.01 ||SPBC3B9.20|GTPase activating
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 834

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 177 SAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEE 221
           +A+G  NQNT+S+I  SE  +      +S   E      V EN++
Sbjct: 778 TANGTSNQNTTSEITTSETTATEKTPSNSSDTEDDVG-DVVENDK 821


>SPBC577.15c |||NASP family histone binding
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 396

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 11/108 (10%)

Query: 144 AVRNSRFV--ALDVAELVNESPGQNIENEGI-LMAISAHGLQNQNTSSDINNSENASCSS 200
           A+ NS+ +  AL   E V+++     E E I     S   ++N+ T     N EN+S + 
Sbjct: 88  AIENSQVLGNALGAKESVSQATESFEEPEAIGSFTFSGQKIENKYTV----NEENSSIAH 143

Query: 201 NDRHSPSRESSPSLTVPENEESN-ELTWACEDPQKMSQ---FSLFPDS 244
            ++ S  +E++ +    E +E +  + W   D  ++ Q      +PDS
Sbjct: 144 PEKESEEKETNEASPASEEDEDDFNVAWEVLDLTRVMQSKAVDAYPDS 191


>SPCC132.01c ||SPCC1322.17c|DUF814 family
           protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1021

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 14/65 (21%), Positives = 31/65 (47%)

Query: 147 NSRFVALDVAELVNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSP 206
           +S+  + D + +   +    IE +G+   ISA  +++Q+ +S+  N +  S    D    
Sbjct: 840 SSQIPSNDSSNVQTPTAESEIEEDGVSEPISAEVIEDQSRNSEAENEKGLSTEQRDEKKH 899

Query: 207 SRESS 211
           ++  S
Sbjct: 900 AKVES 904


>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1085

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 187 SSDINNSENASCSSNDRHSPSRESSP 212
           SS ++NS N   + N RHS SR +SP
Sbjct: 859 SSLLSNSNNFGLNPNARHSLSRANSP 884


>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
           Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 953

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 38/175 (21%), Positives = 78/175 (44%), Gaps = 15/175 (8%)

Query: 52  EESTVPGPXXXXXXXXXDIETKQNLEILGDYFLNQDFNTIESVITDSEKSLLTPSTSVSN 111
           E   +P P          + +KQNL +  D    Q+ +T +    D++ S L  +  ++ 
Sbjct: 536 ENRFLPKPSPKPSEFSSSVGSKQNLSM--DIPSVQNVSTKQKSTNDTDNSKLKINKPLTG 593

Query: 112 GKLQYPRYMTKGFVDNTVNSILESREYVSLLTAVRNSRFVA-LDVAELVNESPGQNIENE 170
           G    P    +  ++++V +   ++E+V      R  R +  ++V+   ++  G +I  E
Sbjct: 594 GYAPLPSRPNR--MNHSVLNEKSNKEFV------RGPRVLPPIEVSS--SKMAGLDIRKE 643

Query: 171 GILMAI-SAHGLQNQNTSSDINNSENASCSS-NDRHSPSRESSPSLTVPENEESN 223
               A+ SA     ++ SS++ N +  S +  N      RE+ P L + +N +S+
Sbjct: 644 PFTPAVPSAKSGLKKDQSSEVANKDVVSKNKDNIAILADREARPQLLLDDNNDSS 698


>SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 305

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 183 NQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNELTWACEDPQ 233
           +Q  SS  NN E+AS   +  H+P++    +  VP    S  L+     PQ
Sbjct: 161 SQERSSSYNNFEDASSPQSSYHTPTKRRKNA--VPRKSSSPPLSSTKHAPQ 209


>SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 520

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 176 ISAHGLQNQNTSSD-INNSENASCSSNDRHSPSRESSPSLTVPENEES--NELTWACEDP 232
           IS   ++N +  SD +N       + ++ +  S+ S+P + + E E +  +E     E+ 
Sbjct: 191 ISDSSIKNNSIHSDEVNPEVRPDLTPSNENEESKRSAPEIALKEKESTSQDESNREAEEA 250

Query: 233 QKMSQFSLFPDSSISYQ 249
              + +S FP SS+  Q
Sbjct: 251 PISTNYS-FPSSSLEDQ 266


>SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 406

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 159 VNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPE 218
           +N +  +++ N+ I   I  + LQ + T+SD N  +  S + ++  +P  E  PS     
Sbjct: 35  LNSNSSKSLNNDRISRTIE-NSLQKE-TNSD-NKIKKLSKTKSNPTNPKSEEDPSQICQS 91

Query: 219 NEESNELT 226
            +ESN +T
Sbjct: 92  FDESNIIT 99


>SPBC1734.01c ||SPBC337.17c|RNA-binding
          protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 682

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 26 RPLKKARFAWQVKGKYHLKNENSDSSEEST 55
          RPL + +   ++   Y L+NE S SS ES+
Sbjct: 70 RPLNQDKATKEIDRLYELENEGSSSSSESS 99


>SPCC31H12.03c |||transcriptional regulator|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 245

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 14/135 (10%)

Query: 92  ESVITDSEKSLLTPSTSVSNGKLQYPRYMTKGFVDNTVNSILESREYVSLLTAVRNSRF- 150
           ES+I  S+++   P TS    + Q     +K  V N V+S   ++E   L+   R  RF 
Sbjct: 102 ESII--SKETSQAPETSTGAEEHQETTEESKQSVSNEVSSPDVAKEQEKLIQ--RAKRFG 157

Query: 151 VALDVAELVNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRES 210
           + +D  ++   +        GI   +++   +N N       S+N    SN R     ++
Sbjct: 158 IPVDDEQIKKAARAARF---GIQQPLASSNNKNHN------QSKNPQNRSNSRSKQRNKN 208

Query: 211 SPSLTVPENEESNEL 225
           +P  + P   +SN L
Sbjct: 209 APPKSAPSKRKSNIL 223


>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 491

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 42/188 (22%), Positives = 74/188 (39%), Gaps = 11/188 (5%)

Query: 44  KNENSDSSEESTVPGPXXXXXXXXXDIETKQNLEILGDYFLNQDFNTIES---VITDSEK 100
           KN++S+    +++            + ET  N +I+     +Q+   IE    V   +  
Sbjct: 32  KNKDSEKRINNSIAESEQVVDSALSNPETNANEDIIAPQLPSQNSEIIEKNSPVNKLNSS 91

Query: 101 SLLTPSTSVSNGKLQYPRYMTKGFVDNTVNSILESREYVSLLTAVRNSRFV----ALDVA 156
           + LT     S  KL+   +      +  V +  E +E  SL+ +V  +  +    A+   
Sbjct: 92  TSLTTHQLASLPKLEVTDHDNVSEAETVVLNEDEEKE-TSLVGSVSVTEDLGDSSAIGRT 150

Query: 157 ELVNESPGQNIENEGILMAISAHGLQNQNTSSD-INNSENASCSSNDRHSPSRESSPSLT 215
            LVN S    +EN   +  +S    ++   S +   N  N    +N  H+   E S    
Sbjct: 151 ILVNNSVEPQMENTANITIVSPSLKESDFESEEKATNDNNGLIETN--HNSKLEESSEHE 208

Query: 216 VPENEESN 223
             E+EESN
Sbjct: 209 EEEDEESN 216


>SPCC645.13 |||transcription elongation
           regulator|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 721

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 7/70 (10%)

Query: 154 DVAELVNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPS 213
           DV+  V  SP ++ E++          L   N  ++ NN EN   SS+ + + ++ES   
Sbjct: 71  DVSSQVQNSPNKDEEHQ-------TADLLASNEGNEKNNEENNVVSSDSKEAITKESGAE 123

Query: 214 LTVPENEESN 223
           L   E   +N
Sbjct: 124 LESSEPASTN 133


>SPBC3B9.14c |mrpl3||mitochondrial ribosomal protein subunit
           L3|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 326

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 76  LEILGDYFLNQDFNTIESVITDSEKS-LLTPSTSVSNGKLQYPR 118
           L ILG  +L+Q FN  +  I D   S  L P T +   +LQ+PR
Sbjct: 178 LAILGGVYLHQGFNDTKKFINDHILSKQLDPRTML---QLQWPR 218


>SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 695

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 182 QNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNELTWACEDPQKMSQFSLF 241
           Q+ ++SSD  N   +S S+ND       +  +  VPE +++++L     + +K+   S F
Sbjct: 31  QDSSSSSDSPNFFPSS-STNDHQERDTINDTNFVVPEKQKTSKLALLAAERKKL--HSSF 87

Query: 242 PDS 244
           P +
Sbjct: 88  PST 90


>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 500

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 6/89 (6%)

Query: 160 NESPGQNIENEGILMAISAHGLQNQNTSSDINNSENAS---CSSNDRHSPSRESSPSLTV 216
           +ES   + E+E       +   +++++SS+ ++SE+       + ++   S ESS S   
Sbjct: 87  SESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSS--- 143

Query: 217 PENEESNELTWACEDPQKMSQFSLFPDSS 245
            E+EE  E     E+ ++ S  S    SS
Sbjct: 144 SESEEEEEAVVKIEEKKESSSDSSSESSS 172


>SPAC29B12.07 |sec16||multidomain vesicle coat component
           Sec16|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1995

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 192 NSENASCSSNDRHSPSRESSPSLTVPENEES 222
           NS   S  S  +  PS + S S+TV +N++S
Sbjct: 474 NSNTGSQPSETQSKPSIDPSESITVTDNQDS 504


>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 658

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 41/203 (20%), Positives = 74/203 (36%), Gaps = 12/203 (5%)

Query: 10  SSCTGQENGDGSTDSERPLKKARFAW-QVKGKYHLKNENSDSSEESTVPGPXXXXXXXXX 68
           S+     + DGS+     +     A+ Q+    +  N NS  + +S+  G          
Sbjct: 347 SNANSSNSNDGSSSKSLDVGSFVNAFKQLNVNDNSSNNNSSGNTDSSTIGYAAVFAAAGK 406

Query: 69  DIETKQNLEILGDYFLNQDFNTIESVITDSEKSLLTPSTSVSNGKLQYPRYMTKGFVDNT 128
                      G+    +  N   S++    K+L+   T+ S  + Q       G   N+
Sbjct: 407 FFSQHSCDLASGNKSAQEGQNQFLSMVESEAKNLMN-KTNYSANQSQ------NGNSQNS 459

Query: 129 VNSILESREYVSLLTAVRNSRFVALDVAELVNESPGQNIENEGILMAISAHGLQNQNTSS 188
            N + ++ +    L   RN          L N + G +    G L A +  GL      S
Sbjct: 460 GNPVSQAIDLAKSLFQNRNLLTKLAQSGVLTNAAQGSS----GGLSAAAVSGLIGSFMGS 515

Query: 189 DINNSENASCSSNDRHSPSRESS 211
             NNS +++ +SN  ++ S  S+
Sbjct: 516 SSNNSNSSNNNSNTSNNNSNTSN 538


>SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 579

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 9/43 (20%), Positives = 25/43 (58%)

Query: 95  ITDSEKSLLTPSTSVSNGKLQYPRYMTKGFVDNTVNSILESRE 137
           +++++K  ++  ++V +G++ +     KGF  N ++    +RE
Sbjct: 22  VSEAKKDYISQESTVLSGQVDFVEPEHKGFFQNLIDGFKPARE 64


>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 841

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 183 NQNTSSDINNSENASCSS--NDRHSPSRESSPSLTVPENEESN 223
           NQ TS+  +N++  S +   ND  +    + PS+ +P +E  N
Sbjct: 610 NQATSTSSSNTQEISYTGTLNDNINEGLSTFPSIDIPASEADN 652


>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 275

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 14/65 (21%), Positives = 26/65 (40%)

Query: 169 NEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNELTWA 228
           NE     +      N N + ++NN E    + + +  P  E+S        +   E++ A
Sbjct: 202 NEKSGTEVEQQSAPNSNGNEEVNNLEPVGQNESKQEPPKEENSNVSQEQPEQAQPEVSAA 261

Query: 229 CEDPQ 233
            E P+
Sbjct: 262 SEQPE 266


>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 355

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 165 QNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNE 224
           +++  EG L   +++  Q+Q+ + D N+S+  SCS+    S  R  +P         +NE
Sbjct: 209 ESLRREGYL---NSNKKQSQSPNGDYNSSDE-SCSNKTVASSQRRGTPGSNNVHTASNNE 264


>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1841

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%)

Query: 139  VSLLT-AVRNSRFVALDVAELVNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENAS 197
            V+LLT  + N    +    E  N  P + +EN  +   I  +   N++TS+   N ENA+
Sbjct: 1629 VNLLTPTISNGTRASKHANEKENTFP-RGVENNLVAPMIPNNTELNEDTSAVSRNLENAT 1687

Query: 198  CSSNDRHSPSRESSPSLTVPENEESNEL 225
                +    +   S +   P N + N +
Sbjct: 1688 NDLKETFPTTTTISTARAKPGNNDINTI 1715


>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1018

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 9/159 (5%)

Query: 72  TKQNLEILGDYFLNQDFNTIESVITDSEKSLLTPSTSVSNGKLQYPRYMTKGFVDNTVNS 131
           TK NL    +  L++    + S  +D+  SLL  +T+VS+   ++ ++++      T  S
Sbjct: 248 TKDNLTNNPEISLDEPIKALPSTTSDAPSSLL--NTNVSSSPSKFRKFLSSVIPAKTDLS 305

Query: 132 ILESREYVSLLTAVRNSRFVALDVA---ELVNESPGQ---NIENEGILMAISAHGLQNQN 185
             ES    + L+    +R  +  VA   E V  S  +   ++ENE +    +      + 
Sbjct: 306 AKESLTSSTRLSTSYKTRKRSSGVAFSSETVTSSSKERKRSVENEMLKPHPTIFESPPEI 365

Query: 186 TSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNE 224
           TS D +N+  A   +    S + E  P  + P ++  ++
Sbjct: 366 TSFDKSNAVEAEALTAKLKS-NEERLPVSSQPGSDAKSQ 403


>SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1309

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 13/52 (25%), Positives = 32/52 (61%), Gaps = 2/52 (3%)

Query: 73   KQNLEILGDYFLNQDFNTIESVITDSEKSLLTPSTSVSNGKL--QYPRYMTK 122
            ++N+E + +     +F+++ S +T+SE+ ++   +++SN  L  +  R +TK
Sbjct: 1191 RRNVEFVNERVPTPEFSSLLSSLTNSEREVIRLVSNLSNHVLTNESARQLTK 1242


>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 857

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 182 QNQNTSSDINNSENASCSSNDRHSPSRESSPSLT 215
           Q  NT+S++    NAS S   R   S+E+ P  T
Sbjct: 210 QTANTTSNLRVPVNASWSDAGRKEKSQENKPKPT 243


>SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 230

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 6/112 (5%)

Query: 139 VSLLTAVRNSRFVALDVAELVNESPGQNIE-NEGILMAISAHGLQNQNTSSDINNSENAS 197
           +S+ TA+    ++ +D A     +P  ++  N G L  +     +  +TSS  ++S ++ 
Sbjct: 9   ISIFTAIS---YLVVDGATPRTFAPSASVSINYGTLSTVFPSLYRRASTSS--SSSSSSI 63

Query: 198 CSSNDRHSPSRESSPSLTVPENEESNELTWACEDPQKMSQFSLFPDSSISYQ 249
            +S+D    +  SSPS T   +     +  A +        S   ++SI  Q
Sbjct: 64  STSHDSQPSTSSSSPSSTSTSSSSGTSVITASDVSASNEIISSSTNNSIHQQ 115


>SPBC11B10.05c |rsp1||random septum position protein
           Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 494

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 10/129 (7%)

Query: 97  DSEKSLLTPSTSVSNGKLQ---YPRYMTKGFV-DNTVNSILESREYVSLLTAVRNSRFVA 152
           +S K + T  + +S+G L     P +   G+  +N V+ I  S  +         ++F A
Sbjct: 156 NSFKEVSTSKSYISSGYLHPKTSPIFKKNGYATENVVDPISSSPRF----KGPNYNKFNA 211

Query: 153 LDVAELVNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSP 212
               E + E          I   ++++G++N + +   ++  ++S S+N+R   + E S 
Sbjct: 212 KLYLESLREKRRTYTPLSEISNGLNSNGVENSSITK--SSPRSSSSSNNERFKDTSEESI 269

Query: 213 SLTVPENEE 221
             T P   E
Sbjct: 270 IFTSPNTPE 278


>SPBC16C6.06 |pep1|vps10|sorting receptor for
           CPY|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1466

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 14/50 (28%), Positives = 25/50 (50%)

Query: 150 FVALDVAELVNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCS 199
           F   +  E++N+  G  IE+E +++A+      + +    IN    ASCS
Sbjct: 891 FFEYEQDEILNDVVGFMIEDEYVIVAVQDEEGTSLSLDVSINGLNFASCS 940


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.307    0.125    0.346 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,294,214
Number of Sequences: 5004
Number of extensions: 53346
Number of successful extensions: 224
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 204
Number of HSP's gapped (non-prelim): 40
length of query: 295
length of database: 2,362,478
effective HSP length: 72
effective length of query: 223
effective length of database: 2,002,190
effective search space: 446488370
effective search space used: 446488370
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 53 (25.4 bits)

- SilkBase 1999-2023 -