Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001499-TA|BGIBMGA001499-PA|undefined
(295 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 38 0.013
03_06_0448 - 34005581-34005655,34005735-34005830,34006669-340076... 32 0.63
02_05_1053 - 33778057-33778278,33778454-33778546,33778628-337787... 32 0.63
09_04_0507 + 18194320-18195081 30 1.9
08_01_0621 - 5426210-5427787 30 1.9
08_02_1531 + 27674064-27674771 30 2.5
04_04_0092 - 22759791-22760676,22761446-22761813,22762202-227622... 30 2.5
03_06_0507 + 34404843-34404968,34405091-34405151,34405260-344052... 30 2.5
06_03_1180 + 28218386-28218649,28218725-28219202,28219309-282196... 29 3.4
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 29 3.4
03_06_0337 + 33224333-33224479,33224603-33224663,33224740-332247... 29 3.4
02_01_0348 - 2506007-2506909,2507003-2508120,2508230-2508883,250... 29 3.4
01_06_0554 + 30179641-30179658,30179725-30180126,30180580-301808... 29 3.4
01_01_0469 - 3456067-3456123,3456414-3456565,3456649-3456779,345... 29 3.4
12_02_0770 - 23007202-23007333,23007475-23007555,23007642-230077... 29 4.4
06_01_0861 + 6527279-6527582,6527619-6527719,6527817-6528042,652... 29 5.9
07_03_1769 + 29377784-29377878,29377993-29378180,29378340-293784... 28 7.8
01_01_1206 - 9702128-9702184,9702272-9702323,9702410-9702471,970... 28 7.8
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 37.5 bits (83), Expect = 0.013
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 153 LDVAELVNESPGQNI--ENEGILMAISAHGLQNQNTSSD---INNSENASCSSNDR--HS 205
LDV+ +V ES G+NI E E +A+ H Q++NT+ + ++E S S
Sbjct: 2390 LDVSSVVTESEGENINKETEDHKLALPVHPTQDENTTEQGFGLEDTEKESMSPEKALPAE 2449
Query: 206 PSRESSPSLTVPENEESN---ELTWACEDPQKMSQFSLFPDSS 245
P + +T ++EE EL A E+ K ++ P SS
Sbjct: 2450 PEEQEENQVTKEQDEEDRHDAELGDAHEEDHKEAEQDYLPVSS 2492
>03_06_0448 - 34005581-34005655,34005735-34005830,34006669-34007616,
34007684-34007851,34007908-34008099,34008164-34008346,
34008414-34008590,34008667-34012074
Length = 1748
Score = 31.9 bits (69), Expect = 0.63
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 125 VDNTVNSILESREYVSLLT-AVRNSRFVALDVAELVNE-SPGQNIENEGILM------AI 176
+D+ V S ++ E + T ++N + LD E+ E +PG IEN + +
Sbjct: 1164 LDSGVKSDIDIMEIETQATEGIQNQETMELDKQEMEEEQNPGTTIENNKMKIPEEDASTF 1223
Query: 177 SAHGLQNQNTSSDINNSENASCSSNDRHSPSRE 209
S +Q S+D+N E + + ND H +E
Sbjct: 1224 SCGEIQTDPHSTDVNEVEFTTGTQNDEHLDIKE 1256
>02_05_1053 -
33778057-33778278,33778454-33778546,33778628-33778700,
33779130-33779204,33779768-33779829,33780282-33780341,
33780469-33780508,33780766-33781043
Length = 300
Score = 31.9 bits (69), Expect = 0.63
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Query: 133 LESREYVSLLTAVRNSRFVALDVAELVNESPGQNIENEGILMAISAHGLQNQNTSSDINN 192
L+ RE + A+ R DV E+ E +N + I + + + + Q ++N
Sbjct: 203 LKGRENLYKKQAIELLRRFQNDVGEMATEE-SKNFQERNIYLVLVPNKIAIQKEQDELNK 261
Query: 193 SENASCSSNDRHSPSRESSPSLTVPENEESNE 224
+ A S+ ES P PE + E
Sbjct: 262 KDTAIEDSDQSDDQPEESEPVPAQPEESKETE 293
>09_04_0507 + 18194320-18195081
Length = 253
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 206 PSRESSPSLTVPENEESNELTWACEDPQKMSQFS 239
PS +SP + E+ ES E WA E P +S+ S
Sbjct: 32 PSPAASPESSEAESPESEESEWAAEGPGMLSEAS 65
>08_01_0621 - 5426210-5427787
Length = 525
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 182 QNQNTSSDINNSENA--SCSSNDRHSPSRESSPSLTVPENEESN 223
++Q TS+ +N+SE + S S++ S + S S++V E+EES+
Sbjct: 470 RDQPTSASVNDSEESDLSTSASVNESDESDQSSSISVNESEESD 513
>08_02_1531 + 27674064-27674771
Length = 235
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 69 DIETKQNLEILG-DYFLNQDFNTIESVITDSEKSLLTPSTSVSNGKLQ-YPRYMTKG--F 124
D E + +LE+L +N+ F ++S+I D + SL +V K+Q Y R + K
Sbjct: 74 DREMEYSLELLDLCNTMNEVFTELKSIIQDLQVSLRKGDDAVVQAKIQSYIRLVKKAKKH 133
Query: 125 VDNTVNSILESREYVSLLTAVRNSRFVALDVAE 157
TV + +E ++ + N+R + + E
Sbjct: 134 SKKTVKKVASDKEDSKMVKLLSNAREITTSLFE 166
>04_04_0092 -
22759791-22760676,22761446-22761813,22762202-22762207,
22763365-22763603,22764808-22765339
Length = 676
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 103 LTPSTSVSNGKLQYPRYMTKGFVDNTVNSILESREYVSLLTAVRNSRFVALDVAELVNES 162
+TP ++ GKL R + G V SI+ES +SL + S +AL+ E ++
Sbjct: 503 VTPPRPLTIGKLHNSRSRSAGNTTEAVQSIIESHA-ISLHCRISKSMCIALNFVESWLQN 561
Query: 163 PGQNIENEGIL-MAISAH 179
+ + N +L +++ H
Sbjct: 562 TAKKLCNGQLLNLSVGIH 579
>03_06_0507 +
34404843-34404968,34405091-34405151,34405260-34405296,
34405365-34405386,34405861-34405957,34406037-34406180,
34407034-34407173,34408205-34408255,34408347-34408429,
34408515-34408590,34408646-34408760,34409080-34409575,
34409682-34409895,34410000-34410070,34410527-34410695,
34410787-34410916,34411330-34411742,34411839-34412039
Length = 881
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 2 NITKASEESSCTGQENGDGSTD-------SERPLKKARFAWQVKGKYHLKNENSDSSEES 54
N+ K+SE++ +G E D TD SE+ K+ V L+N + EE+
Sbjct: 370 NLIKSSEKAEPSGNEGSDVDTDTETEQDTSEKKQKQTHLPASVPAADKLENSKRVAEEEN 429
Query: 55 TVP 57
T+P
Sbjct: 430 TLP 432
>06_03_1180 +
28218386-28218649,28218725-28219202,28219309-28219697,
28219785-28220426,28220466-28221368
Length = 891
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 182 QNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNE 224
+ +N SSD ++S N+S S N S + S +L + +EE +E
Sbjct: 347 EEENDSSDDSDSSNSS-SDNSSDSSESDDSKTLVIDSDEELDE 388
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 5 KASEESSCTGQENGDGSTDSERPLKKARFAWQVKGKYHLKNENSDSSEEST 55
K EESS + + + +DS+ P K A + K K ++ D SE+S+
Sbjct: 276 KKEEESSDSSDSDSESESDSDEPAKPTIPAKRPLTKDTKKGQSKDESEDSS 326
>03_06_0337 +
33224333-33224479,33224603-33224663,33224740-33224776,
33225237-33225367,33225447-33225590,33225686-33225776,
33225973-33226106,33226234-33226373,33227328-33227426,
33227520-33227602,33227690-33227744,33227826-33227937,
33228274-33228766,33228881-33229094,33229203-33229273,
33229733-33229901,33229991-33230120,33230556-33230968,
33231059-33231262
Length = 975
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 2 NITKASEESSCTGQENGDGSTD-------SERPLKKARFAWQVKGKYHLKNENSDSSEES 54
N+ K+SE + +G E D TD SE+ K+ V L+N + EE+
Sbjct: 463 NLIKSSERAEPSGNEGSDIDTDTETEQDTSEKKQKQTHLPTSVPAADKLENSKRVAQEEN 522
Query: 55 TVP 57
T+P
Sbjct: 523 TLP 525
>02_01_0348 -
2506007-2506909,2507003-2508120,2508230-2508883,
2508920-2509046
Length = 933
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 182 QNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVP 217
+ +N SSD ++S N SS+D S S ES S TVP
Sbjct: 360 EEENDSSDDSDSSN---SSSDNSSDSSESDDSKTVP 392
>01_06_0554 +
30179641-30179658,30179725-30180126,30180580-30180892,
30180966-30181358,30181442-30182427
Length = 703
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 191 NNSENASCSSNDRHSPSRESSPSLTVPENEESNELTWACEDPQKMSQFSLFPDS 244
NNS +++ ++ S R+ SP + + E +E C D K SLF DS
Sbjct: 331 NNSHDSAENTLKERSEERQPSPDSMIDQAESRSEQACLCHD--KTDSGSLFQDS 382
>01_01_0469 -
3456067-3456123,3456414-3456565,3456649-3456779,
3456846-3458036,3458460-3458541,3458947-3458984,
3459091-3459250,3459356-3459557,3460245-3460329,
3460809-3460863,3461230-3461325,3461807-3461940,
3462031-3462043,3462315-3462419,3462935-3463121
Length = 895
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 16 ENGDGSTDSERPLKKARFAWQVKGKYHLKNENSDSSEEST 55
+ G + + RP ++A ++ VKG H+K E S ST
Sbjct: 156 DEGPNNKSTARPAREAHVSFSVKGLGHVKMETPPQSPRST 195
>12_02_0770 -
23007202-23007333,23007475-23007555,23007642-23007742,
23007855-23008455,23008742-23009365,23010294-23010377
Length = 540
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/66 (24%), Positives = 28/66 (42%)
Query: 161 ESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENE 220
+S I+N+ + G + S+D +NSE S ++ + +R+ P N
Sbjct: 341 KSTSYEIDNDFVTSRSKRDGNKRSRESTDADNSEEEPTSDSELDAQNRKQKAVTESPANV 400
Query: 221 ESNELT 226
S LT
Sbjct: 401 RSEPLT 406
>06_01_0861 +
6527279-6527582,6527619-6527719,6527817-6528042,
6528132-6528475,6528624-6528989,6529080-6529347,
6529479-6529696
Length = 608
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/110 (18%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 137 EYVSLLTAVRNSRFVALDVAELVNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENA 196
E L T +A+D +N+S G N ++ ++ ++ + + T D + +
Sbjct: 463 EMQELFTGSSADGSLAMDQNTCMNDSDGSNSDDSRDMLDLNCYTQPEEPTGEDSDTLPSP 522
Query: 197 SCSSNDRHSPSRESSPSLTVPENEESNELTWACEDPQKMSQFSLFPDSSI 246
+ ++ +S S +P +P+ + + + W QK+ + PD +
Sbjct: 523 TTNATVDNSSSGSQAPP-PMPQLTDPHAILW-----QKLEAIPMTPDQRV 566
>07_03_1769 +
29377784-29377878,29377993-29378180,29378340-29378472,
29378580-29378715,29378996-29379072,29379162-29380830,
29380935-29381018,29381120-29381224,29381302-29381358
Length = 847
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 179 HGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESN 223
H QN+ +SS++N S N S S+ + + +S + T +EE N
Sbjct: 240 HNFQNETSSSELNISSNCSPESSIKVTQDIGASTTGTDSVSEERN 284
>01_01_1206 -
9702128-9702184,9702272-9702323,9702410-9702471,
9702578-9702665,9703027-9703095,9703224-9703281,
9703895-9703996,9704075-9704179,9704273-9704624,
9706005-9706100,9706427-9706501,9707192-9707370,
9707501-9707740,9707922-9708017,9708193-9708306,
9708428-9708527
Length = 614
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 184 QNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNELTWACEDPQKMSQFSLFP 242
Q S + + +S+D H+P ESS PE+++ + A D + S P
Sbjct: 238 QEDESKVAEHHDGHATSHDNHTPESESSVEQHDPESQDDISIKAAPADESPPEETSAAP 296
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.307 0.125 0.346
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,461,248
Number of Sequences: 37544
Number of extensions: 273723
Number of successful extensions: 713
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 702
Number of HSP's gapped (non-prelim): 22
length of query: 295
length of database: 14,793,348
effective HSP length: 82
effective length of query: 213
effective length of database: 11,714,740
effective search space: 2495239620
effective search space used: 2495239620
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -