Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001499-TA|BGIBMGA001499-PA|undefined
(295 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protei... 38 0.011
L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protei... 38 0.011
U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical pr... 34 0.14
U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical pr... 34 0.14
U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical pr... 34 0.14
AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobuli... 34 0.14
Z81038-15|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 31 0.98
Z81038-14|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 31 0.98
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81072-13|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 30 2.3
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 30 2.3
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 30 2.3
Z82074-1|CAB04928.2| 480|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL132864-6|CAB63395.1| 480|Caenorhabditis elegans Hypothetical ... 29 3.0
AF043699-4|AAB97568.1| 610|Caenorhabditis elegans Serotonin/oct... 29 5.2
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 28 6.9
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 28 6.9
Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z70213-2|CAA94171.1| 304|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical pr... 28 9.1
U80454-4|AAB37876.3| 896|Caenorhabditis elegans Prion-like-(q/n... 28 9.1
AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical... 28 9.1
AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical... 28 9.1
AF036706-17|AAK39277.2| 582|Caenorhabditis elegans Enhanced rna... 28 9.1
AC024863-2|AAP31420.1| 366|Caenorhabditis elegans Prion-like-(q... 28 9.1
AC024863-1|AAF60877.1| 481|Caenorhabditis elegans Prion-like-(q... 28 9.1
>L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protein
1.2, isoform b protein.
Length = 381
Score = 37.5 bits (83), Expect = 0.011
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 101 SLLTPSTSVSN-GKLQYPRYMTKGFVDNTVNSILESREYVSLLTAVRNSRFVALDVAEL- 158
S +TPS S SN K+ Y KG NS S L V+N + V ++ E
Sbjct: 123 STVTPSGSSSNLKKIDLESY--KGRPKPLSNSSDSPSTRPSFLPDVKNQKVVEQELMEQR 180
Query: 159 VNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSP 212
+ E+ Q I G + S+H L + +TSS +N+ N S+ S + P
Sbjct: 181 MKEAAQQKIHRNGHRPSSSSHPLHHHSTSSSASNNSNHQNRSSSGLSAHQHQKP 234
>L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protein
1.2, isoform a protein.
Length = 555
Score = 37.5 bits (83), Expect = 0.011
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 101 SLLTPSTSVSN-GKLQYPRYMTKGFVDNTVNSILESREYVSLLTAVRNSRFVALDVAEL- 158
S +TPS S SN K+ Y KG NS S L V+N + V ++ E
Sbjct: 297 STVTPSGSSSNLKKIDLESY--KGRPKPLSNSSDSPSTRPSFLPDVKNQKVVEQELMEQR 354
Query: 159 VNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSP 212
+ E+ Q I G + S+H L + +TSS +N+ N S+ S + P
Sbjct: 355 MKEAAQQKIHRNGHRPSSSSHPLHHHSTSSSASNNSNHQNRSSSGLSAHQHQKP 408
>U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical
protein F02G3.1c protein.
Length = 955
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 181 LQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNELTWACED 231
++ ++ NNSE +++D + + S+ S+ + EN E E T A ED
Sbjct: 754 VEEKSDEKSNNNSEETETTTSDDNDETEASNESIEIKENSEEQETTLAHED 804
>U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical
protein F02G3.1b protein.
Length = 913
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 181 LQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNELTWACED 231
++ ++ NNSE +++D + + S+ S+ + EN E E T A ED
Sbjct: 727 VEEKSDEKSNNNSEETETTTSDDNDETEASNESIEIKENSEEQETTLAHED 777
>U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical
protein F02G3.1a protein.
Length = 928
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 181 LQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNELTWACED 231
++ ++ NNSE +++D + + S+ S+ + EN E E T A ED
Sbjct: 727 VEEKSDEKSNNNSEETETTTSDDNDETEASNESIEIKENSEEQETTLAHED 777
>AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobulin
domain-containingprotein F02G3.1 protein.
Length = 928
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 181 LQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESNELTWACED 231
++ ++ NNSE +++D + + S+ S+ + EN E E T A ED
Sbjct: 727 VEEKSDEKSNNNSEETETTTSDDNDETEASNESIEIKENSEEQETTLAHED 777
>Z81038-15|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 31.1 bits (67), Expect = 0.98
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 5 KASEESSCTGQENGDGSTDSERPLKKARFAWQVKGKYHLKNENSDSSEEST 55
KA+ + S ++ D S+D E P KK A K +K E S SS++S+
Sbjct: 481 KATPKQSAKKADSSDDSSDDEAPAKKTP-AKSTPAKTAVKKEASSSSDDSS 530
>Z81038-14|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 31.1 bits (67), Expect = 0.98
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 5 KASEESSCTGQENGDGSTDSERPLKKARFAWQVKGKYHLKNENSDSSEEST 55
KA+ + S ++ D S+D E P KK A K +K E S SS++S+
Sbjct: 756 KATPKQSAKKADSSDDSSDDEAPAKKTP-AKSTPAKTAVKKEASSSSDDSS 805
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 154 DVAELVNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHS 205
D E N QN+EN + + + N D+NNS+ S+DR +
Sbjct: 74 DGEEKSNLDDDQNVENPAYIPKTGRFYMHDDNRRGDVNNSQVQDDDSDDRRN 125
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 168 ENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPE 218
+ +G+L + A + ++SSD ++S ++S S + S S SS S + PE
Sbjct: 684 KKKGMLDQLKAESSSDSSSSSDSSDSSDSSDSDDSSDSSSDSSSSSESEPE 734
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 154 DVAELVNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHS 205
D E N QN+EN + + + N D+NNS+ S+DR +
Sbjct: 74 DGEEKSNLDDDQNVENPAYIPKTGRFYMHDDNRRGDVNNSQVQDDDSDDRRN 125
>Z81072-13|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 29.9 bits (64), Expect = 2.3
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 20/210 (9%)
Query: 22 TDSERPLKKARFAWQVKGKYHLKNENSDSSEESTVPGPXXXXXXXXXDIETKQNLEILGD 81
T+ R K ++ K Y L D+ + P P I++K +E L +
Sbjct: 404 TEKSRKKDKEKYPTDQKACYGLLYRRRDAFK----PLPHPKLPPEELIIDSKTEIEELFE 459
Query: 82 YFLNQDFNTIESVITDSEKSLLTPSTSVSNGKLQ-----YPRYMTKGFVDNTVNSILESR 136
+ E + D E+ + +S GKL+ Y F+ T+ + ++
Sbjct: 460 GLTKKKIEKSEKRLYDLERRI--NKVKISYGKLETHSDKYKEANEVVFLPTTLLQDVLAQ 517
Query: 137 EYVSLLTAVRNSRFVALDVAELVNESPGQNIENEGILMAISA-HGLQNQNTSSDINNSEN 195
EY + + A + NE +N E+E + AI+A Q SS+ + S
Sbjct: 518 EYEVAKGEKKKKKKEASE-----NEEKKKNEEDEALSAAIAASEADQRDKASSEPSTSAA 572
Query: 196 ASCSSNDRHSPSRESSPSLTVPENEESNEL 225
A+ + +D + +P+ PEN ES ++
Sbjct: 573 ATEAGDDEELRAESETPN---PENAESTQV 599
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 29.9 bits (64), Expect = 2.3
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 20/210 (9%)
Query: 22 TDSERPLKKARFAWQVKGKYHLKNENSDSSEESTVPGPXXXXXXXXXDIETKQNLEILGD 81
T+ R K ++ K Y L D+ + P P I++K +E L +
Sbjct: 404 TEKSRKKDKEKYPTDQKACYGLLYRRRDAFK----PLPHPKLPPEELIIDSKTEIEELFE 459
Query: 82 YFLNQDFNTIESVITDSEKSLLTPSTSVSNGKLQ-----YPRYMTKGFVDNTVNSILESR 136
+ E + D E+ + +S GKL+ Y F+ T+ + ++
Sbjct: 460 GLTKKKIEKSEKRLYDLERRI--NKVKISYGKLETHSDKYKEANEVVFLPTTLLQDVLAQ 517
Query: 137 EYVSLLTAVRNSRFVALDVAELVNESPGQNIENEGILMAISA-HGLQNQNTSSDINNSEN 195
EY + + A + NE +N E+E + AI+A Q SS+ + S
Sbjct: 518 EYEVAKGEKKKKKKEASE-----NEEKKKNEEDEALSAAIAASEADQRDKASSEPSTSAA 572
Query: 196 ASCSSNDRHSPSRESSPSLTVPENEESNEL 225
A+ + +D + +P+ PEN ES ++
Sbjct: 573 ATEAGDDEELRAESETPN---PENAESTQV 599
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 168 ENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSLTVPE 218
+ +G+L + A + ++SSD ++S ++S S + S S SS S + PE
Sbjct: 684 KKKGMLDQLKAESSSDSSSSSDSSDSSDSSDSDDSSDSSSDSSSSSESEPE 734
>Z82074-1|CAB04928.2| 480|Caenorhabditis elegans Hypothetical
protein W06H12.1 protein.
Length = 480
Score = 29.5 bits (63), Expect = 3.0
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query: 100 KSLLTPSTSVSNGKLQYPRYMTKGFVDNTVNSILESREYVSLLTAVRNSRFVALDVAELV 159
KS+L+ +TS SN KL+ + D ++L+ SLL +E
Sbjct: 202 KSILSTTTSTSNTKLELSEKLENPLQD---TALLDQFLQASLL----GQTPTVTPASEEN 254
Query: 160 NESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSL 214
E QN L + A+ Q N D +SEN +S+ + SP + + SL
Sbjct: 255 EEDKEQNAVLTSFLQILFAN-QQAGNAILDAGSSENDGSTSSSQPSPPADPTASL 308
>AL132864-6|CAB63395.1| 480|Caenorhabditis elegans Hypothetical
protein W06H12.1 protein.
Length = 480
Score = 29.5 bits (63), Expect = 3.0
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query: 100 KSLLTPSTSVSNGKLQYPRYMTKGFVDNTVNSILESREYVSLLTAVRNSRFVALDVAELV 159
KS+L+ +TS SN KL+ + D ++L+ SLL +E
Sbjct: 202 KSILSTTTSTSNTKLELSEKLENPLQD---TALLDQFLQASLL----GQTPTVTPASEEN 254
Query: 160 NESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPSL 214
E QN L + A+ Q N D +SEN +S+ + SP + + SL
Sbjct: 255 EEDKEQNAVLTSFLQILFAN-QQAGNAILDAGSSENDGSTSSSQPSPPADPTASL 308
>AF043699-4|AAB97568.1| 610|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 3 protein.
Length = 610
Score = 28.7 bits (61), Expect = 5.2
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Query: 130 NSILESREYVSLLTAVRN-SRFVALDVAE-LVNESPGQNIENEGILMAISAHGLQNQNTS 187
NSI + S +TA +R A D A+ LVN + I HG ++++
Sbjct: 315 NSIDATANGTSQITAAATKARKFANDSAKTLVNRGAVGATQQAPIGARFKRHGRDSESSV 374
Query: 188 SDINNSENASC----SSNDRHSPSRESSPSLTVPENEESNELTWACEDPQKMS 236
+N + + S S N+ E+S S + NE++ +LT +D MS
Sbjct: 375 DSMNGTNSYSATPHKSGNEELGSLIENSRSSSTDSNEKTEQLTNQTDDNFSMS 427
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 97 DSEKSLLTPSTSVSNGKLQYPRYMTKGFVDNTVNSILESREYVSLLTAVRNSRFV 151
+++K + P+ S+S+G P ++T D+ ++ S Y ++T RN+ +
Sbjct: 207 NTKKPINEPACSISSGMTTNPDWITVDTEDDVKIRVIVSVYYADIVTQPRNTEVI 261
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 97 DSEKSLLTPSTSVSNGKLQYPRYMTKGFVDNTVNSILESREYVSLLTAVRNSRFV 151
+++K + P+ S+S+G P ++T D+ ++ S Y ++T RN+ +
Sbjct: 301 NTKKPINEPACSISSGMTTNPDWITVDTEDDVKIRVIVSVYYADIVTQPRNTEVI 355
>Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Query: 203 RHSPSRESSPSLTV--PENEESNE 224
R SP RES+P +TV PE+E N+
Sbjct: 135 RFSPRRESTPDVTVEAPEDENKND 158
>Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Query: 203 RHSPSRESSPSLTV--PENEESNE 224
R SP RES+P +TV PE+E N+
Sbjct: 182 RFSPRRESTPDVTVEAPEDENKND 205
>Z70213-2|CAA94171.1| 304|Caenorhabditis elegans Hypothetical
protein ZK930.2 protein.
Length = 304
Score = 27.9 bits (59), Expect = 9.1
Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 15/160 (9%)
Query: 69 DIETKQNLEILGDYFLNQDFNTIESVITDSEKSLLTPSTSVSNGKLQYPRYMTKGFVDNT 128
D+E + + E L +NQD NT+E + S+ L +S + R +GF
Sbjct: 118 DMERRSHAEELRQ--INQDINTLEDITKSSKTELEKRKMKISVAMGEVAR--MRGF---- 169
Query: 129 VNSILESREYVSLLTAVRNSRFVALDVAELVNESPGQNI-----ENEGILMAISAHGLQN 183
+N LES + L + A + P ++ + L + +
Sbjct: 170 INENLESMNIIHKLETSEEEELFKVTCARQTTDPPTPSVPRVPSDLPAFLQTLLNNAAMQ 229
Query: 184 QNTSSDINNSENASCSSNDRHSPSRESSPSLTVPENEESN 223
Q + S ++ +N + R PS + + V EN +N
Sbjct: 230 QPSGSQVDVPQN--LINRHRMPPSFVEASKMKVCENCGAN 267
>Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical
protein B0001.2 protein.
Length = 926
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 2 NITKASEESSCTGQ-ENGDGSTDSERPLKKARFAWQVKGKYHLKNENSDSSEESTVP 57
N+ K+ ++S +G EN + S+ RP K + K + + N + S VP
Sbjct: 328 NVIKSEKDSEDSGDSENENSSSTDSRPSKPKKNVENKKSEEKINNSSEKKEYSSNVP 384
>U80454-4|AAB37876.3| 896|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 66
protein.
Length = 896
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/70 (21%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 154 DVAELVNESPGQNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSRESSPS 213
+ + + N GQN +N+ A ++ QN+ ++ NS+NA ++S + ++ P+
Sbjct: 620 NASNVQNSQNGQNDKNDP--NAQNSQNGQNRQNDPNVQNSQNAQNGQYAQNSKNGQNDPN 677
Query: 214 LTVPENEESN 223
+N +++
Sbjct: 678 AKNAQNGQND 687
>AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Query: 203 RHSPSRESSPSLTV--PENEESNE 224
R SP RES+P +TV PE+E N+
Sbjct: 135 RFSPRRESTPDVTVEAPEDENKND 158
>AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Query: 203 RHSPSRESSPSLTV--PENEESNE 224
R SP RES+P +TV PE+E N+
Sbjct: 182 RFSPRRESTPDVTVEAPEDENKND 205
>AF036706-17|AAK39277.2| 582|Caenorhabditis elegans Enhanced rnai
(rna interference)protein 1, isoform b protein.
Length = 582
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/67 (26%), Positives = 30/67 (44%)
Query: 134 ESREYVSLLTAVRNSRFVALDVAELVNESPGQNIENEGILMAISAHGLQNQNTSSDINNS 193
E E V + V ++ +D+ + G + E E + A S H + +TSS S
Sbjct: 487 EMLEVVERMPPVSSTLHTEVDLDAVWERDGGSDSERENLSNAPSLHEFPSSSTSSPHATS 546
Query: 194 ENASCSS 200
E+ + SS
Sbjct: 547 EHVTSSS 553
>AC024863-2|AAP31420.1| 366|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 89,
isoform b protein.
Length = 366
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 165 QNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSR--ESSPSLTVPENEES 222
QNI+N G+ S G + NT+S+ N +PS +S + T P
Sbjct: 93 QNIQNRGLFNNQSPFGATSNNTNSNSNKGVTIQFQLRGYSNPSSALPNSQTCTCPSGYTC 152
Query: 223 NELTWACEDPQKMSQFSLFPDSSISYQ 249
+ L + + PD S+ YQ
Sbjct: 153 SFLKTSPRCYFAFTFIVSSPDESVRYQ 179
>AC024863-1|AAF60877.1| 481|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 89,
isoform a protein.
Length = 481
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 165 QNIENEGILMAISAHGLQNQNTSSDINNSENASCSSNDRHSPSR--ESSPSLTVPENEES 222
QNI+N G+ S G + NT+S+ N +PS +S + T P
Sbjct: 93 QNIQNRGLFNNQSPFGATSNNTNSNSNKGVTIQFQLRGYSNPSSALPNSQTCTCPSGYTC 152
Query: 223 NELTWACEDPQKMSQFSLFPDSSISYQ 249
+ L + + PD S+ YQ
Sbjct: 153 SFLKTSPRCYFAFTFIVSSPDESVRYQ 179
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.307 0.125 0.346
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,802,234
Number of Sequences: 27539
Number of extensions: 271434
Number of successful extensions: 918
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 890
Number of HSP's gapped (non-prelim): 52
length of query: 295
length of database: 12,573,161
effective HSP length: 81
effective length of query: 214
effective length of database: 10,342,502
effective search space: 2213295428
effective search space used: 2213295428
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -