Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001496-TA|BGIBMGA001496-PA|undefined
(188 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74475-4|CAD01086.1| 185|Caenorhabditis elegans Hypothetical pr... 62 2e-10
AF067940-4|AAC19201.1| 487|Caenorhabditis elegans Hypothetical ... 36 0.018
Z81516-6|CAB04206.1| 524|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z75535-5|CAA99829.1| 524|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81500-1|CAB04093.1| 390|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z49128-2|CAA88959.1| 848|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF386744-1|AAL57289.1| 384|Caenorhabditis elegans PAF-1 protein. 28 4.8
AF039716-8|AAB96738.1| 384|Caenorhabditis elegans Paf-acetylhyd... 28 4.8
Z92780-3|CAB07178.2| 289|Caenorhabditis elegans Hypothetical pr... 27 6.3
AF067937-3|AAF99913.2| 559|Caenorhabditis elegans Hypothetical ... 27 6.3
Z67995-5|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 27 8.3
AC006675-3|AAK84550.1| 335|Caenorhabditis elegans Serpentine re... 27 8.3
>Z74475-4|CAD01086.1| 185|Caenorhabditis elegans Hypothetical
protein R04F11.5 protein.
Length = 185
Score = 62.5 bits (145), Expect = 2e-10
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 35 DYWKNLFIDYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSRNNPTECDFKDNLKIINN 94
+Y+K + DY + ++ +D P+KA +G+ + NPTE + D L
Sbjct: 19 EYFKRMGNDYATVARETVQGCKDRPVKAGVVFSGLGFLTYAYQTNPTELEMYDYLCERRQ 78
Query: 95 EVGLVSEECLNPKAVEHLRFLDTCYNQEVIHYRSLGILSVMYTSELSNSCDLYRAHCTYT 154
++ LV NP + L D +Q +HY +L S++ S+ ++ +Y + +
Sbjct: 79 KLVLVPNSEHNPATTKELTARDFLISQNRLHYYNLWFFSLLVASDYNDKLRIYSSQDSNL 138
Query: 155 KP-TYFSFPSRIVDIGFMGKWWNLFIKSTNYDVN 187
K + IVDIG +G+W + +YDVN
Sbjct: 139 KDWPWTELWRNIVDIGALGRWHRMETAFVDYDVN 172
>AF067940-4|AAC19201.1| 487|Caenorhabditis elegans Hypothetical
protein F36F12.2 protein.
Length = 487
Score = 35.9 bits (79), Expect = 0.018
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 106 PKAVEHLRFLDTCYNQEVIHYRSLGILSVMYTSELSNSCDLYRAH---CTYTKPTYFSFP 162
PK + + CYNQ H R G+LS T + C+L + CT++ TY S P
Sbjct: 405 PKDDFYTNIVFQCYNQSFYHIRDAGLLSAESTCVNAFDCELSQREAMPCTHSDATYHSGP 464
>Z81516-6|CAB04206.1| 524|Caenorhabditis elegans Hypothetical
protein F26H9.1 protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 106 PKAVEHLRFLDTCY--NQEVIHYRSLGILSVMYTSELSNSCDLYRAHC 151
P A+ +L F T ++EVIH+ L +LSV+ + E L RA C
Sbjct: 328 PTALFYLLFSPTTIQDDEEVIHWHRLSLLSVVTSEEAEELKPLSRAMC 375
>Z75535-5|CAA99829.1| 524|Caenorhabditis elegans Hypothetical
protein F26H9.1 protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 106 PKAVEHLRFLDTCY--NQEVIHYRSLGILSVMYTSELSNSCDLYRAHC 151
P A+ +L F T ++EVIH+ L +LSV+ + E L RA C
Sbjct: 328 PTALFYLLFSPTTIQDDEEVIHWHRLSLLSVVTSEEAEELKPLSRAMC 375
>Z81500-1|CAB04093.1| 390|Caenorhabditis elegans Hypothetical
protein F11D11.1 protein.
Length = 390
Score = 27.9 bits (59), Expect = 4.8
Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 8/91 (8%)
Query: 32 KWADYWKNLFIDYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSRNNP--TECDFKDNL 89
KW +K Y + R +D P KWT G Y NN TE DN
Sbjct: 193 KWVQEYKISNKTYPAWIGGARDCPEDSPCTIFKWTDGYTNLYDALNNNAQLTERTGFDNC 252
Query: 90 KII-----NNEVGLVSEECLNPKAVEHLRFL 115
I N + + S+ C+ P+A R +
Sbjct: 253 LAILPPRNNTDAIIFSQPCV-PEAYCQFRMI 282
>Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical protein
B0024.8 protein.
Length = 1185
Score = 27.9 bits (59), Expect = 4.8
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 86 KDNLKIINNEVGLVSEECLNPKAVEHLRFLDTCYNQEVIHYRSLGILSVMYT----SELS 141
+ NLK + N++ L+ K+ EH TC + + +L M + S +
Sbjct: 1040 ESNLKAVMNQLAHALTAHLSSKSEEHKHLARTCIQHTIRSIEPVSLLPAMTSATKKSNVK 1099
Query: 142 NSCDLYRAHCTYTKPTYFSFPSRIVDIGFMGKWWNLFIKSTNYDVN 187
+ +C +K Y S P + V++ + W+ +K++ DV+
Sbjct: 1100 QRPFILTQYCELSKLAYKSKPKQ-VEVMALPLLWD-SVKNSAPDVD 1143
>Z49128-2|CAA88959.1| 848|Caenorhabditis elegans Hypothetical
protein M03C11.2 protein.
Length = 848
Score = 27.9 bits (59), Expect = 4.8
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 21 FPEKFKGTIIEKWADYWKNLFIDYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSRNNP 80
F +K K I K + K +F + RQ SD+ D +A K + G I F ++
Sbjct: 674 FQKKMKEFGILKRIEEKKAVFTESRQPT----SDVWDRFSRAAKTSKGAILFAVVGGKMS 729
Query: 81 TECDFKDNLKIINNEVGLVSEECLNPKAVEHLRFLDT 117
+F D L +GL + + E ++FLDT
Sbjct: 730 EGINFCDELGRAVIVIGLPYPNKTSVELRERMKFLDT 766
>AF386744-1|AAL57289.1| 384|Caenorhabditis elegans PAF-1 protein.
Length = 384
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 86 KDNLKIINNEVGLVSEECLNPKAVEHLRFLDT 117
KD KI N +VG +EEC KAV+ L LD+
Sbjct: 174 KDQFKIRNEQVGKRAEEC--AKAVKILEQLDS 203
>AF039716-8|AAB96738.1| 384|Caenorhabditis elegans
Paf-acetylhydrolase protein 1 protein.
Length = 384
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 86 KDNLKIINNEVGLVSEECLNPKAVEHLRFLDT 117
KD KI N +VG +EEC KAV+ L LD+
Sbjct: 174 KDQFKIRNEQVGKRAEEC--AKAVKILEQLDS 203
>Z92780-3|CAB07178.2| 289|Caenorhabditis elegans Hypothetical
protein C45G3.3 protein.
Length = 289
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 23 EKFKGTIIEKWADYWKNLFIDYRQMLQDLRSDIQD----DPMKAMKWTTGIITFYLLSRN 78
E+ K I+E + ++ I + ++++ + + D +KA KW G + SR
Sbjct: 207 EQSKLAIVEAYRKLFEESHIKTVNVAEEVKKNAEISKIFDELKAWKWIYGKSPKFQYSRE 266
Query: 79 NPTECDFKDNLKIINNE 95
N + + KD L + N+
Sbjct: 267 NKSIIEVKDGLVLDTNQ 283
>AF067937-3|AAF99913.2| 559|Caenorhabditis elegans Hypothetical
protein F22F7.3 protein.
Length = 559
Score = 27.5 bits (58), Expect = 6.3
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
Query: 74 LLSRNNPTECDFKDNLKIINNEVGLVSEECLNPKAVEHLRFLDTCYNQEVIHYRSLGILS 133
L+S + E D + +K I + + PK ++ + CYN H R L
Sbjct: 425 LISDQHLLEIDME--MKSILTSEPIAALSATLPKTDFYMPIIFKCYNDSFYHLRDTKTLL 482
Query: 134 VMYTSELSNSCDLYRAH---CTYTKPTYFSFP 162
T + C+L + CT++ TY S P
Sbjct: 483 NDVTCVNAFDCELPQQEGMPCTHSDATYHSGP 514
>Z67995-5|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 43 DYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSR-NNPTE 82
D + +L L + ++W+ II+FYL+ R NN TE
Sbjct: 686 DIQGLLDQLHEIVILQNTAVLQWSDSIISFYLVERLNNITE 726
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 43 DYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSR-NNPTE 82
D + +L L + ++W+ II+FYL+ R NN TE
Sbjct: 686 DIQGLLDQLHEIVILQNTAVLQWSDSIISFYLVERLNNITE 726
>AC006675-3|AAK84550.1| 335|Caenorhabditis elegans Serpentine
receptor, class h protein35 protein.
Length = 335
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 134 VMYTSELSNSCDLYRAHCTYTKPTYFSFPSRIVDIGFMGKW 174
+++TS L ++YR+HC++ + YFS + +G W
Sbjct: 113 ILFTSRLFKIFNMYRSHCSWQR--YFSEGLVYSAVAGIGLW 151
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.137 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,986,451
Number of Sequences: 27539
Number of extensions: 206212
Number of successful extensions: 554
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 547
Number of HSP's gapped (non-prelim): 14
length of query: 188
length of database: 12,573,161
effective HSP length: 77
effective length of query: 111
effective length of database: 10,452,658
effective search space: 1160245038
effective search space used: 1160245038
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
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