Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001495-TA|BGIBMGA001495-PA|IPR000626|Ubiquitin
(364 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 40 7e-04
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 39 0.001
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 34 0.027
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 32 0.11
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 32 0.15
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 31 0.19
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 31 0.34
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 30 0.59
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 30 0.59
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 30 0.59
SPBC18E5.11c |edc3|SPBC23G7.01c|enhancer of mRNA decapping Edc3 ... 30 0.59
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 30 0.59
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 30 0.59
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 30 0.59
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 29 0.78
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.0
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 29 1.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.8
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 27 3.1
SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces pomb... 27 3.1
SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3 s... 27 3.1
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.2
SPAC1782.03 |||microfibrillar-associated protein family protein|... 27 5.5
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 27 5.5
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 7.3
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 26 7.3
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 26 7.3
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 26 7.3
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 26 7.3
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 26 7.3
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 26 9.6
SPAC1B3.10c |||SEL1 repeat protein, unknown biological role|Schi... 26 9.6
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 26 9.6
SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subun... 26 9.6
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 26 9.6
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 39.5 bits (88), Expect = 7e-04
Identities = 43/188 (22%), Positives = 64/188 (34%), Gaps = 4/188 (2%)
Query: 177 PIALRHLTNLVRSRS--STGSTPGDTAPTSGFAYSLEALSXXXXXXXXXXXXXXXRNQIX 234
P + +T+LV S S S+ S+ T+ +S S + S
Sbjct: 74 PASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVAS 133
Query: 235 XXXXXXXXXXXXXXVSTPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPS-RSVITPEMF 293
S P S H S + S+ SST GPS ++++
Sbjct: 134 SSSSGMSSSSLSHSSSVPSSSSSYHSSSMTTSGLSSSASIVSSTYRDGPSIITLVSTSYV 193
Query: 294 SEAISEAINRSSNRQSDGTPMEQSTAASSSQSPGGR-EDNFTTQLNHMHEMGLLDDALNV 352
SE ++ + N S T ST SSS S G NH+ + A+ V
Sbjct: 194 SEVVTPTTTNNWNSSSSFTSSTSSTPISSSYSSSGTLPSKSNKSSNHVGVVVGCSVAIPV 253
Query: 353 RALLICSG 360
+LI G
Sbjct: 254 GVVLILIG 261
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 38.7 bits (86), Expect = 0.001
Identities = 51/256 (19%), Positives = 95/256 (37%), Gaps = 13/256 (5%)
Query: 92 TYTDAELQQLNASLRTLGCTPN--APGWTRAMQLLNDDSVMAEIIEQAPSLGEDCVALSI 149
+Y+D QL +S T + P T + LL+ SV + I+ + S+ E ++ S
Sbjct: 105 SYSDPATSQLPSSTSFFSPTSSEYTPSSTESSSLLDPSSVSSAILPSSTSV-EVSISSSS 163
Query: 150 LHEVELL-----AALGANLQTMRRGATAHPELPIALRHLTNLVRSRSSTGST-PGDTAPT 203
L + L ++L ++ + + ++ + T+ S S+ S ++P+
Sbjct: 164 LSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPS 223
Query: 204 SGFAYSLEALSXXXXX----XXXXXXXXXXRNQIXXXXXXXXXXXXXXXVSTPRSGGGSH 259
S + +L + S + +S+ S S
Sbjct: 224 SSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSP 283
Query: 260 ESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTA 319
S + + SS ++ +S S S + FS +S + SS+ S ST
Sbjct: 284 TSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTI 343
Query: 320 ASSSQSPGGREDNFTT 335
+SSS SP + TT
Sbjct: 344 SSSSSSPSSSSFSSTT 359
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 34.3 bits (75), Expect = 0.027
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 254 SGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTP 313
SG S ES + SS + S+ +S S S + E S++ S + + S S+G+
Sbjct: 105 SGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSED-SDSSSSSSDSESESSSEGS- 162
Query: 314 MEQSTAASSSQSPGGREDN 332
+ S+++SSS+S EDN
Sbjct: 163 -DSSSSSSSSESESSSEDN 180
Score = 31.1 bits (67), Expect = 0.26
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 250 STPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQS 309
S S G S + SS + S+ +S S S + E S++ S + + S S
Sbjct: 155 SESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSED-SDSSSSSSDSESESSS 213
Query: 310 DGTPMEQSTAASSSQSPGGREDN 332
+G+ + S+++SSS+S EDN
Sbjct: 214 EGS--DSSSSSSSSESESSSEDN 234
Score = 30.7 bits (66), Expect = 0.34
Identities = 19/68 (27%), Positives = 30/68 (44%)
Query: 268 AGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPG 327
+ DS SS + S S + + S S++ + SS+ SD T + +SSS G
Sbjct: 258 SSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDG 317
Query: 328 GREDNFTT 335
+ TT
Sbjct: 318 NSNTDTTT 325
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 32.3 bits (70), Expect = 0.11
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 302 NRSSNRQSDGTPMEQSTAASSSQ--SPGGREDNFTTQLNHMHEMGLLDDALNVRAL 355
N S+N + P +++ SS S + + L+ +H+MG DD++N AL
Sbjct: 125 NHSTNSKPPSLPPRTKSSSQSSPMASTSTSKSRYADSLSTLHDMGFSDDSVNTHAL 180
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 31.9 bits (69), Expect = 0.15
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 290 PEMFSEAISEAINRSS-NRQSDGTPMEQSTAASSSQSPGG---REDNFTTQLNHMH 341
P + S+A NRSS N + D + ST+ S S SP R++ T+ NH H
Sbjct: 94 PSALALTSSKAANRSSTNTEKDSRSIAHSTSRSRSTSPANRHRRKEKERTRSNHRH 149
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 31.5 bits (68), Expect = 0.19
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 258 SHESLLRLLHAGDSSRPHSS--TQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPME 315
S S+ + SS P SS T T+ PS S + S + S + + SS+ S +
Sbjct: 128 SSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 187
Query: 316 QSTAASSSQS 325
S+++SSS S
Sbjct: 188 SSSSSSSSSS 197
Score = 27.9 bits (59), Expect = 2.4
Identities = 33/144 (22%), Positives = 49/144 (34%), Gaps = 12/144 (8%)
Query: 189 SRSSTGSTPGDTAPTSGFAYSLEALSXXXXXXXXXXXXXXXRNQIXXXXXXXXXXXXXXX 248
S SST S+ ++P+S + + S +
Sbjct: 131 SVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 190
Query: 249 VSTPRSGGGSHESLLRLL---------HAGDSSRPHSSTQTSGP--SRSVITPEMFSEAI 297
S+ S S S + H+ SS SS+ +S P S S IT S I
Sbjct: 191 SSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFI 250
Query: 298 SE-AINRSSNRQSDGTPMEQSTAA 320
S + SS+ S + + STAA
Sbjct: 251 STVTVTPSSSSSSTSSEVPSSTAA 274
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 30.7 bits (66), Expect = 0.34
Identities = 19/79 (24%), Positives = 36/79 (45%)
Query: 271 SSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPGGRE 330
++ P +T +G + S + +++IN S+ S+G ST A+ S E
Sbjct: 303 NTHPFLTTLANGHGVMDASGNHHSGSSNQSINADSSAGSEGVDEGTSTEANDESSEDDDE 362
Query: 331 DNFTTQLNHMHEMGLLDDA 349
DN T + N + + D++
Sbjct: 363 DNNTDEANEDAQSNVSDES 381
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 29.9 bits (64), Expect = 0.59
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++++ + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 29.9 bits (64), Expect = 0.59
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++++ + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 29.9 bits (64), Expect = 0.59
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 261 SLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAA 320
S+L+ LH + +R +S SGP R+ I P + S++ ++ S + +
Sbjct: 493 SVLKQLHLANPNRQAASFNFSGPKRAPIRPLSNLRSFSKSQKEETSSNSSNSSGTRRLGL 552
Query: 321 SSSQSPGGRE 330
+P RE
Sbjct: 553 PQRATPASRE 562
>SPBC18E5.11c |edc3|SPBC23G7.01c|enhancer of mRNA decapping Edc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 454
Score = 29.9 bits (64), Expect = 0.59
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 251 TPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSS 305
TP S GS E+L + D + P T+G ITPE S+ I+ AI ++S
Sbjct: 181 TPGSKKGSRETLKKKPFV-DENIPAELHTTTGDILKPITPEQLSQGIALAIAKTS 234
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 29.9 bits (64), Expect = 0.59
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++++ + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 29.9 bits (64), Expect = 0.59
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++++ + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
Score = 29.9 bits (64), Expect = 0.59
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++++ + + +P LI GK L+D TL + ++
Sbjct: 97 DTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138
Score = 29.9 bits (64), Expect = 0.59
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++++ + + +P LI GK L+D TL + ++
Sbjct: 173 DTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214
Score = 29.9 bits (64), Expect = 0.59
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++++ + + +P LI GK L+D TL + ++
Sbjct: 249 DTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290
Score = 29.9 bits (64), Expect = 0.59
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++++ + + +P LI GK L+D TL + ++
Sbjct: 325 DTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 366
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 29.9 bits (64), Expect = 0.59
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++++ + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 29.5 bits (63), Expect = 0.78
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 272 SRPHSSTQTSGPSR--SVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPGGR 329
SRP SS SG + + I+ E I+ +S++ S P T++SSS +P
Sbjct: 732 SRPQSSGDASGFNTIFTSISQSSDGETSGYTISSNSSQNSASEPQTAFTSSSSSATPTIT 791
Query: 330 EDNFTTQLNHMHEM 343
+ + +T ++ M
Sbjct: 792 QSSISTSVSSQSSM 805
Score = 28.3 bits (60), Expect = 1.8
Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 3/135 (2%)
Query: 191 SSTGSTPGDTAPTSGFAYSLEALSXXXXXXXXXXXXXXXRNQIXXXXXXXXXXXXXXXVS 250
+STGS+ D+ SG YS + ++ + +
Sbjct: 689 NSTGSSSSDSQSFSGTTYSDPTTTITSEVSSILSSPTSMQSSV-SRPQSSGDASGFNTIF 747
Query: 251 TPRSGGGSHESLLRLLHAGDSSRPHSSTQTS-GPSRSVITPEMFSEAISEAI-NRSSNRQ 308
T S E+ + + S S QT+ S S TP + +IS ++ ++SS
Sbjct: 748 TSISQSSDGETSGYTISSNSSQNSASEPQTAFTSSSSSATPTITQSSISTSVSSQSSMNS 807
Query: 309 SDGTPMEQSTAASSS 323
S +P+ ++ SS+
Sbjct: 808 SYSSPISSNSVTSST 822
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 29.1 bits (62), Expect = 1.0
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 275 HSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQS 325
+SST S S S TP S S + + SS S S++ASSS S
Sbjct: 134 YSSTSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVS 184
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 284 SRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQS 325
S S + S I + + SS S TP ST +SSS S
Sbjct: 120 SDSTLAASTISGGIYSSTSASSTSSSTATPSSSSTTSSSSSS 161
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 28.7 bits (61), Expect = 1.4
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 264 RLLHAGDSSRPHSSTQT-SGPSRSV--ITPEMFSEAISEAI-NRSSNRQSDGTPMEQSTA 319
RL G+S +P T +G + V +T ++ + S+ I RS++ PM +
Sbjct: 18 RLAAKGESVKPSKKNGTKNGKDKEVDGVTKDLSELSTSDPIFERSASGVLTSQPMSRDIK 77
Query: 320 ASS-SQSPGGRE--DNFTTQLNHMHEMGLLDD 348
S + S GR +N T +LNH GLL D
Sbjct: 78 IDSYTLSFHGRLLIENATIELNHGQRYGLLGD 109
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.3 bits (60), Expect = 1.8
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 249 VSTPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQ 308
VS P S +S + + +S P S+ TS S ++ + S + + SS
Sbjct: 468 VSVPSSSSVQPQSSTPISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPS 527
Query: 309 SD--GTPMEQSTAASSSQSPGGREDNFTTQL 337
S +PM S +SSS P +F++ +
Sbjct: 528 SSIISSPM-TSVLSSSSSIPTSSSSDFSSSI 557
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 330 EDNFTTQLNHMHEMGLLDDALNVRAL 355
E+ + QL+ ++EMG +D NV+AL
Sbjct: 311 EERYAEQLSQLNEMGFVDFERNVQAL 336
>SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 171 TAHPELPIALRHLTNLVRSRSSTGSTPGDTAPTSGFAYS 209
+A +P+ RH+ + +R+R P D TSG +++
Sbjct: 137 SASQGIPLVRRHVADFIRARDGFDCEPSDIYLTSGASHA 175
>SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3
subunit Alp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 821
Score = 27.5 bits (58), Expect = 3.1
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 9/97 (9%)
Query: 256 GGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPME 315
G +ES + + H DSSR + ST+TS ++IT +IS + S ++ +
Sbjct: 158 GLENESSISIAH--DSSRLNRSTETSSVQHTLITEADLLSSISYVLQGIS---TEYVQFK 212
Query: 316 QSTAASSSQSPGGREDNFTTQLNHMHEMGLLDDALNV 352
A S + P + Q+ + E GLL L V
Sbjct: 213 NELALLSKRIP----VQYLLQMRALSETGLLYQELKV 245
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 175 ELPIALRHLTNLVRSRSSTGSTPGDTAPTSG 205
+LP +H + L SSTGSTP +P G
Sbjct: 58 KLPPPPKHASQLRAGGSSTGSTPRTASPAVG 88
>SPAC1782.03 |||microfibrillar-associated protein family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 26.6 bits (56), Expect = 5.5
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 272 SRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQS-------DGTPMEQSTAASSSQ 324
S H + SR VITP E ISE SSN Q+ D + E T ASS++
Sbjct: 38 SDSHDQENSISSSRHVITPVFEKEGISET-KTSSNFQNINPVQTIDNSASEYETDASSAE 96
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 170 ATAHPELPIALRHLTNLVRS 189
A HP LPIALR L N R+
Sbjct: 385 ARTHPNLPIALRTLFNKART 404
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 7.3
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 271 SSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPGGRE 330
S P SG S++ P + S++ + + NRQS +P S+++ + GR+
Sbjct: 379 SPNPFLQPTFSGTSQASAHPSIHSQSATFNNTQDVNRQSVSSPKVVSSSSVTGSGASGRK 438
>SPBC1E8.02 |||ubiquitin family protein,
unknown|Schizosaccharomyces pombe|chr 2|||Manual
Length = 603
Score = 26.2 bits (55), Expect = 7.3
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 46 PSSSLELIHHGKILKDKATLQE 67
P+ L+LIH G++L+++ L+E
Sbjct: 40 PADRLKLIHAGRVLRNETPLEE 61
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 26.2 bits (55), Expect = 7.3
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 274 PHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSS 323
PH+ TQ I P+ FS A R+ ++ TP EQST+ + +
Sbjct: 331 PHNFTQRELREARRIIPQ-FSYDPPGASGRNRRERTSSTPSEQSTSVNET 379
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 26.2 bits (55), Expect = 7.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 278 TQTS-GPSRSVITPEMFSEAISEAINRSSNRQSDGTP--MEQSTAASSSQSP 326
T++S P+ V++P + AIS R S+ + P ++ST A S SP
Sbjct: 282 TESSMSPTPEVVSPAATNSAISSPFVRKSSSDLEAKPSKKQRSTPAFSHDSP 333
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 26.2 bits (55), Expect = 7.3
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 268 AGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPG 327
+ SS S ++ S S TP S + S + + SS+ + +S++ SSS++
Sbjct: 119 SSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTS 178
Query: 328 GR 329
R
Sbjct: 179 HR 180
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 26.2 bits (55), Expect = 7.3
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 271 SSRPHSSTQTSGPSRSVITP---EMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPG 327
SS H+S S I P ++ S + SE I SN S G ++ SS+Q P
Sbjct: 910 SSTRHTSDNNSLEEVLPIFPGVRKLVSNSQSEKIGDLSNDNSMGAKSYKTPIISSTQRPQ 969
Query: 328 GRE 330
GR+
Sbjct: 970 GRK 972
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 25.8 bits (54), Expect = 9.6
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 258 SHESLLRLLHAGDSSR--PHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPME 315
++E + H+ SS P S + S+ + P M S+ +N + TP+
Sbjct: 108 ANEHSVNSAHSKSSSNASPESLNPSQMMSKRLSLPPMSQFTDSDFVNILRTPFAQSTPLN 167
Query: 316 QSTAASSSQSPGGRED 331
++T++ +++ P R+D
Sbjct: 168 RNTSSRNTEMPLVRKD 183
>SPAC1B3.10c |||SEL1 repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 680
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 44 NVPSSSLELIHHGKILKDKATLQECG 69
N+P S E + H K + D +ECG
Sbjct: 194 NMPQSDEEAVKHYKFISDHLFEEECG 219
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 25.8 bits (54), Expect = 9.6
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 256 GGSHESLLRLLHAGDSSRPHS-STQTSGPSRSVITPEMFSE-AISEAINRSSNRQSD 310
G H + L+ +H+ DSSR S S+Q + PS + + E ++ +I S+R D
Sbjct: 28 GLEHWNPLKKIHSADSSRRRSTSSQLNQPSNYHMHSSLHEEVSVGSSIASPSSRIPD 84
>SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subunit
Rpc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1165
Score = 25.8 bits (54), Expect = 9.6
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 137 APSLGEDCVALSILHEVELLAALGANLQTMRR-GATAHPELPIALRHLTNLV 187
APS+ E+C L+I + L +GA ++ RR GA P AL L +V
Sbjct: 292 APSI-EECAKLNIYTAQQALEYIGARVKVNRRAGANRLPPHEEALEVLAAVV 342
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 25.8 bits (54), Expect = 9.6
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Query: 253 RSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGT 312
R+ G+H S + + T + P + T + N +S S+GT
Sbjct: 135 RAPAGNHSSTTANRTTSTPTTTTARTTRTTPRPTATTNTSNQSTSNSTRNGTSAATSNGT 194
Query: 313 PMEQSTAASSSQSP-GGREDNFTTQL--NHMHEMGLLDD 348
T AS SP R+ N T+ L ++ H M +D
Sbjct: 195 GTGAGTGASHRSSPVTNRQTNNTSALSNSNAHIMSSFED 233
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.127 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,381,896
Number of Sequences: 5004
Number of extensions: 47618
Number of successful extensions: 179
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 138
Number of HSP's gapped (non-prelim): 52
length of query: 364
length of database: 2,362,478
effective HSP length: 74
effective length of query: 290
effective length of database: 1,992,182
effective search space: 577732780
effective search space used: 577732780
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 54 (25.8 bits)
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