Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001495-TA|BGIBMGA001495-PA|IPR000626|Ubiquitin
(364 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0935 + 21670372-21671396,21672057-21672987 37 0.029
10_08_0799 - 20650799-20650947,20651022-20651114,20651906-206519... 35 0.12
01_06_0031 + 25760878-25761342 34 0.16
10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364 32 0.63
02_01_0593 + 4408229-4408294,4408764-4409096,4409756-4409794,440... 32 0.63
07_03_0447 + 18301421-18301520,18301900-18302060 31 1.4
03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177... 31 1.4
04_04_1072 - 30587344-30588034,30589866-30590035,30590682-30590879 31 1.9
02_04_0347 + 22193708-22193720,22194317-22194390,22195388-221961... 31 1.9
08_01_0566 - 5028512-5029150 30 2.5
04_04_0200 - 23529497-23531938,23532586-23533720,23534272-235344... 30 3.3
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873... 29 4.4
05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198 29 4.4
12_02_1283 - 27532143-27532517,27532602-27532906,27533053-275333... 29 5.8
09_06_0335 + 22391378-22391480,22391580-22391769,22392747-223928... 29 5.8
09_04_0554 + 18495073-18495175,18495794-18496032 29 5.8
09_04_0354 + 16919133-16919235,16920145-16920355,16920478-169205... 29 5.8
09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028 29 5.8
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094... 29 5.8
07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710 29 5.8
06_03_1149 + 28018932-28020529,28020989-28021067 29 5.8
06_03_1097 - 27570037-27570262,27570575-27570730,27570763-275708... 29 5.8
05_01_0438 + 3475017-3475484 29 5.8
04_04_1238 + 31997671-31998816 29 5.8
03_02_0281 - 7069847-7069876,7070152-7070218,7071320-7071445,707... 29 5.8
02_01_0464 - 3340642-3342015,3342403-3342405 29 5.8
01_03_0108 - 12628711-12629178 29 5.8
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 29 7.7
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 29 7.7
02_05_0392 - 28567172-28567261,28567480-28567561,28567730-285677... 29 7.7
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 29 7.7
>10_08_0935 + 21670372-21671396,21672057-21672987
Length = 651
Score = 36.7 bits (81), Expect = 0.029
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 271 SSRPHSSTQTSGPSRSV--ITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPGG 328
++ PHSS +SG + +V I P ++S + SS+ SDG+ STA + S + GG
Sbjct: 140 AASPHSSIDSSGAAATVTSIAPSCTVTSLSAKTSVSSSAASDGSGWSNSTAGAGSAAGGG 199
>10_08_0799 -
20650799-20650947,20651022-20651114,20651906-20651934,
20652039-20652097,20652170-20652283,20652374-20652534,
20652544-20652663,20652741-20653469,20654980-20655244
Length = 572
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 28 LENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKS 72
L+ TV + + +VP++ LI+ G+ILKD+ TL+ GV++
Sbjct: 48 LDATVGAFKEVVAGSCDVPAAQQRLIYKGRILKDEQTLESYGVET 92
Score = 32.7 bits (71), Expect = 0.47
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 330 EDNFTTQLNHMHEMGLLDDALNVRALLICSG 360
E+ + TQL + EMG +D A N++AL+ +G
Sbjct: 527 EELYATQLTQLREMGFIDTAENIQALVATAG 557
>01_06_0031 + 25760878-25761342
Length = 154
Score = 34.3 bits (75), Expect = 0.16
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 10 GIKVKPGPIERHKLE-NFGLENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQEC 68
G+ VK + +++ + + +TVD ++ E+R +P LI+ GK L D T +
Sbjct: 76 GLNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDY 135
Query: 69 GVKSGEM 75
+++G +
Sbjct: 136 KIEAGSV 142
>10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364
Length = 333
Score = 32.3 bits (70), Expect = 0.63
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+TV+S++ + +++ +P LI G+ L D T+ CG++
Sbjct: 90 DTVESVKLQLQEKDGLPPCQQRLIFEGRQLDDGDTVASCGIR 131
>02_01_0593 +
4408229-4408294,4408764-4409096,4409756-4409794,
4409870-4409937,4410024-4410068,4410478-4410655,
4410740-4410871,4410941-4411009,4411258-4411305,
4411498-4411545,4411654-4411763,4412044-4412125,
4412232-4412345
Length = 443
Score = 32.3 bits (70), Expect = 0.63
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 32 VDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQE 67
V + E + + + P LIH+GK+LKD++TL+E
Sbjct: 83 VKKIIEEIQGKDSYPWGQQLLIHNGKVLKDESTLEE 118
>07_03_0447 + 18301421-18301520,18301900-18302060
Length = 86
Score = 31.1 bits (67), Expect = 1.4
Identities = 10/43 (23%), Positives = 26/43 (60%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKS 72
+T+ ++ + ++ +P+ L+H G+ L D+ TL + G+++
Sbjct: 20 DTIGDVKVKIHDKNGIPADDQRLMHAGRQLDDRRTLADYGIQT 62
>03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,
1772689-1772747,1772816-1772929,1773030-1773238,
1773347-1774087,1775678-1776238,1776295-1776419,
1778187-1778317,1779020-1779178,1779471-1779728,
1780140-1780164,1780531-1780592,1780944-1781003,
1781112-1781219,1781703-1781838,1781880-1781929,
1782024-1782096,1782209-1782345,1782441-1782527,
1782624-1782721,1783259-1783369,1783685-1783769,
1783880-1783969
Length = 1259
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 330 EDNFTTQLNHMHEMGLLDDALNVRALLICSG 360
E+ + TQL + EMG D N+RAL+ +G
Sbjct: 1215 EELYATQLAQLQEMGFFDTQENIRALIATAG 1245
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 31 TVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKS 72
+V + + + +VP+ LI+ G+ILKD+ TL GV++
Sbjct: 748 SVGAFKAIVAESCDVPAPQQRLIYKGRILKDEQTLASYGVET 789
>04_04_1072 - 30587344-30588034,30589866-30590035,30590682-30590879
Length = 352
Score = 30.7 bits (66), Expect = 1.9
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 101 LNASLRTLGCTPNAPGWTRAMQLLNDDSVMAEIIEQAPSLGEDCVALSILHE-----VEL 155
L+ L PN+ G +++LN V ++E P+ E+C AL LH +L
Sbjct: 82 LDVRSNQLKSLPNSIGCLSKLKVLN---VSGNLLESLPNTIEECRALEELHANFNELTKL 138
Query: 156 LAALGANLQTMRR---GATAHPELPIALRHLTNL 186
LG L ++R+ + +LP + H+T L
Sbjct: 139 PDTLGFELHSLRKLSVNSNKLAQLPSSTSHMTAL 172
>02_04_0347 +
22193708-22193720,22194317-22194390,22195388-22196132,
22196203-22196417,22196505-22196786,22196870-22196998,
22197088-22197267,22197538-22197645,22197888-22198094
Length = 650
Score = 30.7 bits (66), Expect = 1.9
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 277 STQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPME----QSTAASSSQSPGGREDN 332
++ SGPSR + +S+++ S + D TP+E ++A++SS S +
Sbjct: 56 NSPVSGPSRYQVIHSNLLGWLSDSLGNSVAQNPDNTPVEVIPADASASNSSDSGNSSLEG 115
Query: 333 F--TTQLNHMHEMGLLDDAL 350
F NHM ++ + D L
Sbjct: 116 FQWLNTWNHMKQLTNISDGL 135
>08_01_0566 - 5028512-5029150
Length = 212
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+TV ++ + + + +P++ L+ G+ L+D TL E G+K
Sbjct: 21 DTVGKVKAKIQAKGGIPAAQQRLMFAGRHLEDGRTLAEYGIK 62
>04_04_0200 - 23529497-23531938,23532586-23533720,23534272-23534463,
23535527-23535570
Length = 1270
Score = 29.9 bits (64), Expect = 3.3
Identities = 35/147 (23%), Positives = 52/147 (35%), Gaps = 14/147 (9%)
Query: 43 SNVPSSSLELIHHGKILKDKATLQECGVKSGEMXXXXXXXXXXXXXXPPTYTDAELQQLN 102
SN + S L G+ L +K+ C + P +T + QLN
Sbjct: 926 SNQETKSTPLAREGEQLPEKSCC--CNCRESISRDSQVHDQSAMARPVPAFTGRPVPQLN 983
Query: 103 ASLRTLGCTPNAPGW-TRAMQLLNDDS------VMAEIIEQAPSLGEDCVALSILHEVE- 154
LR T+A L+ V AE PS DC++ SI ++
Sbjct: 984 IGLRASSSFSTYQRTSTKANPCLDSHDQTLAGKVSAEPTMTHPSYTTDCMSPSIQTQLPS 1043
Query: 155 ----LLAALGANLQTMRRGATAHPELP 177
+L +G NL M + HP+ P
Sbjct: 1044 PSNPILRLMGKNLMVMNSEESGHPQAP 1070
>06_01_1069 +
8731567-8731632,8732120-8732281,8733028-8733081,
8733557-8733630,8733706-8733786,8734902-8735079,
8735336-8735506,8736113-8736202,8736284-8736331,
8736447-8736562,8736655-8736733,8737101-8737223
Length = 413
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 38 EAEKRSNV-PSSSLELIHHGKILKDKATLQ 66
E+ + NV P+ LIH GKILKD TL+
Sbjct: 31 ESTQGQNVYPADQQMLIHQGKILKDDTTLE 60
>05_05_0090 -
22310424-22310489,22310768-22310871,22312048-22312198
Length = 106
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 37 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGCTLADYNIQ 78
>12_02_1283 - 27532143-27532517,27532602-27532906,27533053-27533311,
27534412-27534618,27534726-27535181,27535866-27535963,
27536657-27536785,27537371-27537605,27538932-27539039,
27539110-27539160,27539261-27539445,27540207-27540274,
27541535-27541600,27541678-27541730,27542536-27542653,
27542743-27542844,27543525-27543682,27543763-27543840,
27543978-27544069,27544308-27544458
Length = 1097
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 249 VSTPRSGGGSHESLLRLLHA-GDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNR 307
++ +SG G + R H S++ HSS+ PSRS T SE N ++ R
Sbjct: 974 INDMKSGQGQGQRRQRHRHTKASSNKAHSSSYPRVPSRSSNTQRPLLSVQSEGANMTTAR 1033
Query: 308 QS 309
Q+
Sbjct: 1034 QA 1035
>09_06_0335 +
22391378-22391480,22391580-22391769,22392747-22392813,
22393177-22393206
Length = 129
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
>09_04_0554 + 18495073-18495175,18495794-18496032
Length = 113
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
>09_04_0354 +
16919133-16919235,16920145-16920355,16920478-16920544,
16920767-16920808
Length = 140
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
>09_04_0148 +
15106392-15106484,15107517-15107776,15107920-15108028
Length = 153
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
>09_04_0070 +
14308446-14308511,14308844-14309005,14309420-14309473,
14310009-14310073,14310391-14310459,14310590-14310767,
14311085-14311231,14311316-14311432,14311507-14311619,
14311703-14311781,14311892-14312020
Length = 392
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 46 PSSSLELIHHGKILKDKATLQE 67
P+ LIH GK+LKD TL E
Sbjct: 40 PAEQQMLIHQGKVLKDDTTLDE 61
>07_03_0427 -
18080959-18081079,18081203-18081410,18081608-18081710
Length = 143
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
>06_03_1149 + 28018932-28020529,28020989-28021067
Length = 558
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 97 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 173 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 249 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 325 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 401 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 477 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 518
>06_03_1097 -
27570037-27570262,27570575-27570730,27570763-27570881,
27572154-27572236,27574991-27575041,27575218-27575674,
27576139-27576228,27576672-27576701
Length = 403
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 61 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 102
>05_01_0438 + 3475017-3475484
Length = 155
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
>04_04_1238 + 31997671-31998816
Length = 381
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 97 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 173 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 249 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 325 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366
>03_02_0281 -
7069847-7069876,7070152-7070218,7071320-7071445,
7071727-7071916,7072008-7072110
Length = 171
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
>02_01_0464 - 3340642-3342015,3342403-3342405
Length = 458
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 22 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 63
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 98 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 139
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 174 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 215
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 250 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 291
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 326 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 367
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 402 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 443
>01_03_0108 - 12628711-12629178
Length = 155
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71
+T+D+++ + + + +P LI GK L+D TL + ++
Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 28.7 bits (61), Expect = 7.7
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 250 STPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSV 287
STP S G + RLL +G+ +R S +G SR+V
Sbjct: 80 STPSSSSGMRSAAARLLGSGNGNRTLSFVGGNGVSRAV 117
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 28.7 bits (61), Expect = 7.7
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 250 STPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQS 309
S R G HE R S HSS ++ PS T + E+ S + SS+ S
Sbjct: 740 SADRREKGKHEKEDRSRQTTKGSSSHSSRRSRSPSARSRTKK---ESSSHRESVSSDEPS 796
Query: 310 DGTPMEQSTAASSSQSP 326
D + + + SS SP
Sbjct: 797 DNSKRRKLHSCKSSMSP 813
>02_05_0392 -
28567172-28567261,28567480-28567561,28567730-28567776,
28568020-28568134,28568405-28568649,28568728-28568799,
28568902-28568982,28569083-28569140,28569231-28569359,
28570124-28570293
Length = 362
Score = 28.7 bits (61), Expect = 7.7
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 265 LLHAGDSSRPHSSTQTSGPSRSVIT-PEMFSEAISEAINRSSNRQSDGTPMEQSTAASSS 323
L+H + R H Q+ GPS V+ + S A+S+ + R ++ TP+E+ +
Sbjct: 231 LVHMHNHDRLH---QSLGPSSVVLKYSSVGSGALSDGLWRRASAAGASTPLEKRAFGIAD 287
Query: 324 QSPGGREDNFTTQLNHMHEMGLLDDALN 351
E+ F + E L DD L+
Sbjct: 288 DMQRLLENTFRLDIYAAREYFLADDRLS 315
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 28.7 bits (61), Expect = 7.7
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 250 STPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQS 309
S P G SH SS +++ Q GPS +V+TP + +E S A + +R +
Sbjct: 241 SVPPGAGPSHNM------ENTSSSSNTAMQNGGPS-TVVTPVISTEIPSVASDAGISRAN 293
Query: 310 DGTPMEQSTA-----ASSSQSPGGR 329
+ P STA AS+ + GG+
Sbjct: 294 NEYPSLASTADTQNGASAEELEGGQ 318
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.127 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,537,120
Number of Sequences: 37544
Number of extensions: 335421
Number of successful extensions: 1089
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1049
Number of HSP's gapped (non-prelim): 49
length of query: 364
length of database: 14,793,348
effective HSP length: 83
effective length of query: 281
effective length of database: 11,677,196
effective search space: 3281292076
effective search space used: 3281292076
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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