BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001495-TA|BGIBMGA001495-PA|IPR000626|Ubiquitin (364 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_08_0935 + 21670372-21671396,21672057-21672987 37 0.029 10_08_0799 - 20650799-20650947,20651022-20651114,20651906-206519... 35 0.12 01_06_0031 + 25760878-25761342 34 0.16 10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364 32 0.63 02_01_0593 + 4408229-4408294,4408764-4409096,4409756-4409794,440... 32 0.63 07_03_0447 + 18301421-18301520,18301900-18302060 31 1.4 03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177... 31 1.4 04_04_1072 - 30587344-30588034,30589866-30590035,30590682-30590879 31 1.9 02_04_0347 + 22193708-22193720,22194317-22194390,22195388-221961... 31 1.9 08_01_0566 - 5028512-5029150 30 2.5 04_04_0200 - 23529497-23531938,23532586-23533720,23534272-235344... 30 3.3 06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873... 29 4.4 05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198 29 4.4 12_02_1283 - 27532143-27532517,27532602-27532906,27533053-275333... 29 5.8 09_06_0335 + 22391378-22391480,22391580-22391769,22392747-223928... 29 5.8 09_04_0554 + 18495073-18495175,18495794-18496032 29 5.8 09_04_0354 + 16919133-16919235,16920145-16920355,16920478-169205... 29 5.8 09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028 29 5.8 09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094... 29 5.8 07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710 29 5.8 06_03_1149 + 28018932-28020529,28020989-28021067 29 5.8 06_03_1097 - 27570037-27570262,27570575-27570730,27570763-275708... 29 5.8 05_01_0438 + 3475017-3475484 29 5.8 04_04_1238 + 31997671-31998816 29 5.8 03_02_0281 - 7069847-7069876,7070152-7070218,7071320-7071445,707... 29 5.8 02_01_0464 - 3340642-3342015,3342403-3342405 29 5.8 01_03_0108 - 12628711-12629178 29 5.8 12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 29 7.7 04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 29 7.7 02_05_0392 - 28567172-28567261,28567480-28567561,28567730-285677... 29 7.7 01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 29 7.7 >10_08_0935 + 21670372-21671396,21672057-21672987 Length = 651 Score = 36.7 bits (81), Expect = 0.029 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Query: 271 SSRPHSSTQTSGPSRSV--ITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPGG 328 ++ PHSS +SG + +V I P ++S + SS+ SDG+ STA + S + GG Sbjct: 140 AASPHSSIDSSGAAATVTSIAPSCTVTSLSAKTSVSSSAASDGSGWSNSTAGAGSAAGGG 199 >10_08_0799 - 20650799-20650947,20651022-20651114,20651906-20651934, 20652039-20652097,20652170-20652283,20652374-20652534, 20652544-20652663,20652741-20653469,20654980-20655244 Length = 572 Score = 34.7 bits (76), Expect = 0.12 Identities = 16/45 (35%), Positives = 28/45 (62%) Query: 28 LENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKS 72 L+ TV + + +VP++ LI+ G+ILKD+ TL+ GV++ Sbjct: 48 LDATVGAFKEVVAGSCDVPAAQQRLIYKGRILKDEQTLESYGVET 92 Score = 32.7 bits (71), Expect = 0.47 Identities = 13/31 (41%), Positives = 21/31 (67%) Query: 330 EDNFTTQLNHMHEMGLLDDALNVRALLICSG 360 E+ + TQL + EMG +D A N++AL+ +G Sbjct: 527 EELYATQLTQLREMGFIDTAENIQALVATAG 557 >01_06_0031 + 25760878-25761342 Length = 154 Score = 34.3 bits (75), Expect = 0.16 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 10 GIKVKPGPIERHKLE-NFGLENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQEC 68 G+ VK + +++ + + +TVD ++ E+R +P LI+ GK L D T + Sbjct: 76 GLNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDY 135 Query: 69 GVKSGEM 75 +++G + Sbjct: 136 KIEAGSV 142 >10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364 Length = 333 Score = 32.3 bits (70), Expect = 0.63 Identities = 12/42 (28%), Positives = 25/42 (59%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +TV+S++ + +++ +P LI G+ L D T+ CG++ Sbjct: 90 DTVESVKLQLQEKDGLPPCQQRLIFEGRQLDDGDTVASCGIR 131 >02_01_0593 + 4408229-4408294,4408764-4409096,4409756-4409794, 4409870-4409937,4410024-4410068,4410478-4410655, 4410740-4410871,4410941-4411009,4411258-4411305, 4411498-4411545,4411654-4411763,4412044-4412125, 4412232-4412345 Length = 443 Score = 32.3 bits (70), Expect = 0.63 Identities = 14/36 (38%), Positives = 23/36 (63%) Query: 32 VDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQE 67 V + E + + + P LIH+GK+LKD++TL+E Sbjct: 83 VKKIIEEIQGKDSYPWGQQLLIHNGKVLKDESTLEE 118 >07_03_0447 + 18301421-18301520,18301900-18302060 Length = 86 Score = 31.1 bits (67), Expect = 1.4 Identities = 10/43 (23%), Positives = 26/43 (60%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKS 72 +T+ ++ + ++ +P+ L+H G+ L D+ TL + G+++ Sbjct: 20 DTIGDVKVKIHDKNGIPADDQRLMHAGRQLDDRRTLADYGIQT 62 >03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517, 1772689-1772747,1772816-1772929,1773030-1773238, 1773347-1774087,1775678-1776238,1776295-1776419, 1778187-1778317,1779020-1779178,1779471-1779728, 1780140-1780164,1780531-1780592,1780944-1781003, 1781112-1781219,1781703-1781838,1781880-1781929, 1782024-1782096,1782209-1782345,1782441-1782527, 1782624-1782721,1783259-1783369,1783685-1783769, 1783880-1783969 Length = 1259 Score = 31.1 bits (67), Expect = 1.4 Identities = 13/31 (41%), Positives = 19/31 (61%) Query: 330 EDNFTTQLNHMHEMGLLDDALNVRALLICSG 360 E+ + TQL + EMG D N+RAL+ +G Sbjct: 1215 EELYATQLAQLQEMGFFDTQENIRALIATAG 1245 Score = 30.7 bits (66), Expect = 1.9 Identities = 14/42 (33%), Positives = 25/42 (59%) Query: 31 TVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKS 72 +V + + + +VP+ LI+ G+ILKD+ TL GV++ Sbjct: 748 SVGAFKAIVAESCDVPAPQQRLIYKGRILKDEQTLASYGVET 789 >04_04_1072 - 30587344-30588034,30589866-30590035,30590682-30590879 Length = 352 Score = 30.7 bits (66), Expect = 1.9 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 11/94 (11%) Query: 101 LNASLRTLGCTPNAPGWTRAMQLLNDDSVMAEIIEQAPSLGEDCVALSILHE-----VEL 155 L+ L PN+ G +++LN V ++E P+ E+C AL LH +L Sbjct: 82 LDVRSNQLKSLPNSIGCLSKLKVLN---VSGNLLESLPNTIEECRALEELHANFNELTKL 138 Query: 156 LAALGANLQTMRR---GATAHPELPIALRHLTNL 186 LG L ++R+ + +LP + H+T L Sbjct: 139 PDTLGFELHSLRKLSVNSNKLAQLPSSTSHMTAL 172 >02_04_0347 + 22193708-22193720,22194317-22194390,22195388-22196132, 22196203-22196417,22196505-22196786,22196870-22196998, 22197088-22197267,22197538-22197645,22197888-22198094 Length = 650 Score = 30.7 bits (66), Expect = 1.9 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 277 STQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPME----QSTAASSSQSPGGREDN 332 ++ SGPSR + +S+++ S + D TP+E ++A++SS S + Sbjct: 56 NSPVSGPSRYQVIHSNLLGWLSDSLGNSVAQNPDNTPVEVIPADASASNSSDSGNSSLEG 115 Query: 333 F--TTQLNHMHEMGLLDDAL 350 F NHM ++ + D L Sbjct: 116 FQWLNTWNHMKQLTNISDGL 135 >08_01_0566 - 5028512-5029150 Length = 212 Score = 30.3 bits (65), Expect = 2.5 Identities = 12/42 (28%), Positives = 25/42 (59%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +TV ++ + + + +P++ L+ G+ L+D TL E G+K Sbjct: 21 DTVGKVKAKIQAKGGIPAAQQRLMFAGRHLEDGRTLAEYGIK 62 >04_04_0200 - 23529497-23531938,23532586-23533720,23534272-23534463, 23535527-23535570 Length = 1270 Score = 29.9 bits (64), Expect = 3.3 Identities = 35/147 (23%), Positives = 52/147 (35%), Gaps = 14/147 (9%) Query: 43 SNVPSSSLELIHHGKILKDKATLQECGVKSGEMXXXXXXXXXXXXXXPPTYTDAELQQLN 102 SN + S L G+ L +K+ C + P +T + QLN Sbjct: 926 SNQETKSTPLAREGEQLPEKSCC--CNCRESISRDSQVHDQSAMARPVPAFTGRPVPQLN 983 Query: 103 ASLRTLGCTPNAPGW-TRAMQLLNDDS------VMAEIIEQAPSLGEDCVALSILHEVE- 154 LR T+A L+ V AE PS DC++ SI ++ Sbjct: 984 IGLRASSSFSTYQRTSTKANPCLDSHDQTLAGKVSAEPTMTHPSYTTDCMSPSIQTQLPS 1043 Query: 155 ----LLAALGANLQTMRRGATAHPELP 177 +L +G NL M + HP+ P Sbjct: 1044 PSNPILRLMGKNLMVMNSEESGHPQAP 1070 >06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081, 8733557-8733630,8733706-8733786,8734902-8735079, 8735336-8735506,8736113-8736202,8736284-8736331, 8736447-8736562,8736655-8736733,8737101-8737223 Length = 413 Score = 29.5 bits (63), Expect = 4.4 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Query: 38 EAEKRSNV-PSSSLELIHHGKILKDKATLQ 66 E+ + NV P+ LIH GKILKD TL+ Sbjct: 31 ESTQGQNVYPADQQMLIHQGKILKDDTTLE 60 >05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198 Length = 106 Score = 29.5 bits (63), Expect = 4.4 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 37 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGCTLADYNIQ 78 >12_02_1283 - 27532143-27532517,27532602-27532906,27533053-27533311, 27534412-27534618,27534726-27535181,27535866-27535963, 27536657-27536785,27537371-27537605,27538932-27539039, 27539110-27539160,27539261-27539445,27540207-27540274, 27541535-27541600,27541678-27541730,27542536-27542653, 27542743-27542844,27543525-27543682,27543763-27543840, 27543978-27544069,27544308-27544458 Length = 1097 Score = 29.1 bits (62), Expect = 5.8 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 249 VSTPRSGGGSHESLLRLLHA-GDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNR 307 ++ +SG G + R H S++ HSS+ PSRS T SE N ++ R Sbjct: 974 INDMKSGQGQGQRRQRHRHTKASSNKAHSSSYPRVPSRSSNTQRPLLSVQSEGANMTTAR 1033 Query: 308 QS 309 Q+ Sbjct: 1034 QA 1035 >09_06_0335 + 22391378-22391480,22391580-22391769,22392747-22392813, 22393177-22393206 Length = 129 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62 >09_04_0554 + 18495073-18495175,18495794-18496032 Length = 113 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62 >09_04_0354 + 16919133-16919235,16920145-16920355,16920478-16920544, 16920767-16920808 Length = 140 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62 >09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028 Length = 153 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62 >09_04_0070 + 14308446-14308511,14308844-14309005,14309420-14309473, 14310009-14310073,14310391-14310459,14310590-14310767, 14311085-14311231,14311316-14311432,14311507-14311619, 14311703-14311781,14311892-14312020 Length = 392 Score = 29.1 bits (62), Expect = 5.8 Identities = 12/22 (54%), Positives = 14/22 (63%) Query: 46 PSSSLELIHHGKILKDKATLQE 67 P+ LIH GK+LKD TL E Sbjct: 40 PAEQQMLIHQGKVLKDDTTLDE 61 >07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710 Length = 143 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62 >06_03_1149 + 28018932-28020529,28020989-28021067 Length = 558 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 97 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 173 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 249 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 325 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 401 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 442 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 477 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 518 >06_03_1097 - 27570037-27570262,27570575-27570730,27570763-27570881, 27572154-27572236,27574991-27575041,27575218-27575674, 27576139-27576228,27576672-27576701 Length = 403 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 61 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 102 >05_01_0438 + 3475017-3475484 Length = 155 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62 >04_04_1238 + 31997671-31998816 Length = 381 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 97 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 173 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 249 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 325 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366 >03_02_0281 - 7069847-7069876,7070152-7070218,7071320-7071445, 7071727-7071916,7072008-7072110 Length = 171 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62 >02_01_0464 - 3340642-3342015,3342403-3342405 Length = 458 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 22 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 63 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 98 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 139 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 174 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 215 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 250 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 291 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 326 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 367 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 402 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 443 >01_03_0108 - 12628711-12629178 Length = 155 Score = 29.1 bits (62), Expect = 5.8 Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 30 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVK 71 +T+D+++ + + + +P LI GK L+D TL + ++ Sbjct: 21 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62 >12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399, 3673400-3673448,3674291-3674378,3674477-3674573, 3675195-3675278,3675377-3675464,3676589-3676715, 3676774-3676848,3676934-3677042,3677125-3677448, 3677863-3678039 Length = 623 Score = 28.7 bits (61), Expect = 7.7 Identities = 15/38 (39%), Positives = 21/38 (55%) Query: 250 STPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSV 287 STP S G + RLL +G+ +R S +G SR+V Sbjct: 80 STPSSSSGMRSAAARLLGSGNGNRTLSFVGGNGVSRAV 117 >04_04_1466 - 33799104-33799229,33799659-33799669,33800052-33800200, 33800261-33800299,33800690-33800746,33800839-33801628, 33801705-33801980,33802051-33802117,33802211-33802285, 33802618-33802812,33802927-33803076,33803152-33803522, 33804070-33804193,33804246-33804275,33804306-33804417, 33804919-33804985,33805138-33805180,33805768-33805872 Length = 928 Score = 28.7 bits (61), Expect = 7.7 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 3/77 (3%) Query: 250 STPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQS 309 S R G HE R S HSS ++ PS T + E+ S + SS+ S Sbjct: 740 SADRREKGKHEKEDRSRQTTKGSSSHSSRRSRSPSARSRTKK---ESSSHRESVSSDEPS 796 Query: 310 DGTPMEQSTAASSSQSP 326 D + + + SS SP Sbjct: 797 DNSKRRKLHSCKSSMSP 813 >02_05_0392 - 28567172-28567261,28567480-28567561,28567730-28567776, 28568020-28568134,28568405-28568649,28568728-28568799, 28568902-28568982,28569083-28569140,28569231-28569359, 28570124-28570293 Length = 362 Score = 28.7 bits (61), Expect = 7.7 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 4/88 (4%) Query: 265 LLHAGDSSRPHSSTQTSGPSRSVIT-PEMFSEAISEAINRSSNRQSDGTPMEQSTAASSS 323 L+H + R H Q+ GPS V+ + S A+S+ + R ++ TP+E+ + Sbjct: 231 LVHMHNHDRLH---QSLGPSSVVLKYSSVGSGALSDGLWRRASAAGASTPLEKRAFGIAD 287 Query: 324 QSPGGREDNFTTQLNHMHEMGLLDDALN 351 E+ F + E L DD L+ Sbjct: 288 DMQRLLENTFRLDIYAAREYFLADDRLS 315 >01_05_0199 - 19174971-19175105,19176302-19176628,19176813-19176915, 19178852-19178916,19179941-19180048,19180213-19180305, 19180395-19180442,19180801-19180899,19180980-19181096, 19181186-19181239,19181312-19181404,19181776-19181881, 19182050-19182084,19182173-19182259,19182385-19182462, 19182528-19182596,19182682-19182780,19183644-19183685, 19184498-19184570,19184654-19184982,19185070-19185127, 19185217-19185269,19186075-19186144,19186276-19186337, 19186452-19186540,19186906-19187011,19187110-19187178, 19187295-19187330 Length = 900 Score = 28.7 bits (61), Expect = 7.7 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 12/85 (14%) Query: 250 STPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQS 309 S P G SH SS +++ Q GPS +V+TP + +E S A + +R + Sbjct: 241 SVPPGAGPSHNM------ENTSSSSNTAMQNGGPS-TVVTPVISTEIPSVASDAGISRAN 293 Query: 310 DGTPMEQSTA-----ASSSQSPGGR 329 + P STA AS+ + GG+ Sbjct: 294 NEYPSLASTADTQNGASAEELEGGQ 318 Database: rice Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.312 0.127 0.359 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,537,120 Number of Sequences: 37544 Number of extensions: 335421 Number of successful extensions: 1089 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 1049 Number of HSP's gapped (non-prelim): 49 length of query: 364 length of database: 14,793,348 effective HSP length: 83 effective length of query: 281 effective length of database: 11,677,196 effective search space: 3281292076 effective search space used: 3281292076 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.9 bits) S2: 61 (28.7 bits)
- SilkBase 1999-2023 -