Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001495-TA|BGIBMGA001495-PA|IPR000626|Ubiquitin
(364 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 37 0.020
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 34 0.14
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 34 0.14
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.97
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.97
AL033536-5|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 31 1.3
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 31 1.3
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 31 1.3
Z82069-5|CAB04906.1| 740|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical pr... 30 2.2
AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopam... 30 2.2
AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopam... 30 2.2
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical pr... 29 5.2
AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical... 29 5.2
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical protein
W02B8.2 protein.
Length = 1256
Score = 37.1 bits (82), Expect = 0.020
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 272 SRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPGGRED 331
S+P + T+ +GPS SV + E+ SE A+ +SNRQ P++ T A S P R +
Sbjct: 969 SQPRNPTRIAGPS-SVTSLEVMSEINCVAMITNSNRQLALIPLDSLTLAMQSTHPSIRAE 1027
Query: 332 NFTTQLNHMH 341
+ H+H
Sbjct: 1028 -VLPEFGHVH 1036
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 34.3 bits (75), Expect = 0.14
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 19 ERHKLENFGLENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSGE 74
+R GL++T+ SL + N+ S +I G++L T+Q G+ G+
Sbjct: 30 DREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAGISDGQ 85
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 34.3 bits (75), Expect = 0.14
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 19 ERHKLENFGLENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSGE 74
+R GL++T+ SL + N+ S +I G++L T+Q G+ G+
Sbjct: 30 DREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAGISDGQ 85
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 33.5 bits (73), Expect = 0.24
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 269 GDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGT-----PMEQSTAASSS 323
G S+ P SST P S IT S I+EA SS + T P T++S+S
Sbjct: 390 GTSTTP-SSTTFKAPPESEITEITVSNEINEASTTSSPTPAATTICISPPTTTQTSSSAS 448
Query: 324 QSPGGREDNFTTQLNHMHE 342
SP +F +L HE
Sbjct: 449 SSPHSSTKSFLAKLGVKHE 467
>Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.97
Identities = 33/132 (25%), Positives = 46/132 (34%), Gaps = 8/132 (6%)
Query: 191 SSTGSTPGDTAPTSGFAYSLEALSXXXXXXXXXXXXXXXRNQIXXXXXXXXXXXXXXXVS 250
+ST ST T PT+ S + S V+
Sbjct: 417 TSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSP---VTSTVTSSSSSSTTVT 473
Query: 251 TPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSD 310
TP S + S + +S ST T+GPS S TP S A S + +S+ QS
Sbjct: 474 TPTSTESTSTSPSSTV---TTSTTAPSTSTTGPSSSSSTPS--STASSSVSSTASSTQSS 528
Query: 311 GTPMEQSTAASS 322
+ + ST S
Sbjct: 529 TSTQQSSTTTKS 540
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.97
Identities = 33/132 (25%), Positives = 46/132 (34%), Gaps = 8/132 (6%)
Query: 191 SSTGSTPGDTAPTSGFAYSLEALSXXXXXXXXXXXXXXXRNQIXXXXXXXXXXXXXXXVS 250
+ST ST T PT+ S + S V+
Sbjct: 417 TSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSP---VTSTVTSSSSSSTTVT 473
Query: 251 TPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSD 310
TP S + S + +S ST T+GPS S TP S A S + +S+ QS
Sbjct: 474 TPTSTESTSTSPSSTV---TTSTTAPSTSTTGPSSSSSTPS--STASSSVSSTASSTQSS 528
Query: 311 GTPMEQSTAASS 322
+ + ST S
Sbjct: 529 TSTQQSSTTTKS 540
>AL033536-5|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 250 STPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPS--RSVITPEMFSEAISEAINRSSNR 307
ST SG GS L A S SST +SGP ++ T ++ S R
Sbjct: 145 STSSSGDGSQVQNSDDLEAYTRSDDKSSTASSGPKPIKANHTNLSAQKSFKSKAIPSRRR 204
Query: 308 QSDGTPMEQSTAASSSQSPGGREDNFT 334
Q P+ S + S+ P + NFT
Sbjct: 205 QFFSAPINSSARRNKSRHPAPNKKNFT 231
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 18 IERHKLENFGLENTVDSLRTEAEKRSNVPSSSLEL 52
IER KL + LE + LRTEA++ + V + SLE+
Sbjct: 742 IEREKLCSKQLEKEISQLRTEADEMNIVMTQSLEM 776
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 18 IERHKLENFGLENTVDSLRTEAEKRSNVPSSSLEL 52
IER KL + LE + LRTEA++ + V + SLE+
Sbjct: 776 IEREKLCSKQLEKEISQLRTEADEMNIVMTQSLEM 810
>Z82069-5|CAB04906.1| 740|Caenorhabditis elegans Hypothetical
protein W04A8.6 protein.
Length = 740
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 281 SGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPGGRE 330
S + + PE F E +E + SS+ P E T+ SSSQ PGG +
Sbjct: 510 SSEDQEITDPEDFEEDETEELEISSS------PFEVETSRSSSQQPGGED 553
>Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical
protein K09G1.4b protein.
Length = 840
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 269 GDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQS 325
G+SS P SS ++ + +VIT + SE + +R S+ D P T++ +S
Sbjct: 408 GNSSTPRSSLESLSENVNVITNDFVSENCT-TFSRRSSYADDSQPTSSQTSSGDGRS 463
>Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical
protein K09G1.4a protein.
Length = 705
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 269 GDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQS 325
G+SS P SS ++ + +VIT + SE + +R S+ D P T++ +S
Sbjct: 273 GNSSTPRSSLESLSENVNVITNDFVSENCT-TFSRRSSYADDSQPTSSQTSSGDGRS 328
>AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopamine
receptor shortvariant protein.
Length = 705
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 269 GDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQS 325
G+SS P SS ++ + +VIT + SE + +R S+ D P T++ +S
Sbjct: 273 GNSSTPRSSLESLSENVNVITNDFVSENCT-TFSRRSSYADDSQPTSSQTSSGDGRS 328
>AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopamine
receptor longvariant protein.
Length = 840
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 269 GDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQS 325
G+SS P SS ++ + +VIT + SE + +R S+ D P T++ +S
Sbjct: 408 GNSSTPRSSLESLSENVNVITNDFVSENCT-TFSRRSSYADDSQPTSSQTSSGDGRS 463
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 97 ELQQLNASLRTLGCTPNAPGWTRAMQLLNDDSVMAEIIEQAPSLGED 143
+ Q + L C+P A G T + +LNDD + E + ++ SL ED
Sbjct: 945 QTQPVRFDLPPSPCSPTAGGSTPFISILNDD-LFDECVSESRSLHED 990
>Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 159 LGANLQTMRRGATAHPELPIALRHLTNLVRSRSSTGST 196
L + + RR ++ P P + ++ +VRSRS TG++
Sbjct: 529 LSQSTKPSRRSSSIRPRSPTSTSQMSTIVRSRSPTGAS 566
>AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 159 LGANLQTMRRGATAHPELPIALRHLTNLVRSRSSTGST 196
L + + RR ++ P P + ++ +VRSRS TG++
Sbjct: 529 LSQSTKPSRRSSSIRPRSPTSTSQMSTIVRSRSPTGAS 566
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.127 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,623,628
Number of Sequences: 27539
Number of extensions: 264758
Number of successful extensions: 764
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 746
Number of HSP's gapped (non-prelim): 30
length of query: 364
length of database: 12,573,161
effective HSP length: 82
effective length of query: 282
effective length of database: 10,314,963
effective search space: 2908819566
effective search space used: 2908819566
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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