GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001494-TA|BGIBMGA001494-PA|IPR005033|YEATS,
IPR002052|N-6 Adenine-specific DNA methylase
         (979 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    26   1.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    26   1.1  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    24   4.4  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 65  TAISVASLLTENLLSHPFIVLRRQCQVHNNLRNY-HIVPYTLLPVVV 110
           T  S+  ++  ++ SHP I   +QC  +N    Y H + Y L  +V+
Sbjct: 180 TLCSIPQMVVFHVESHPNITWYQQCVTYNVFPTYAHELTYLLFGMVM 226


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 65  TAISVASLLTENLLSHPFIVLRRQCQVHNNLRNY-HIVPYTLLPVVV 110
           T  S+  ++  ++ SHP I   +QC  +N    Y H + Y L  +V+
Sbjct: 180 TLCSIPQMVVFHVESHPNITWYQQCVTYNVFPTYAHELTYLLFGMVM 226


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 7/30 (23%), Positives = 21/30 (70%), Gaps = 2/30 (6%)

Query: 425 VPMRNSSFVNLFGPPIHKPAKVSPDPKKIE 454
           +P  +++ ++++   +H+ A + PDP+K++
Sbjct: 81  LPKESNAIIHIYD--VHRNADIYPDPEKLD 108


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.134    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,687
Number of Sequences: 317
Number of extensions: 7837
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 33
Number of HSP's gapped (non-prelim): 3
length of query: 979
length of database: 114,650
effective HSP length: 63
effective length of query: 916
effective length of database: 94,679
effective search space: 86725964
effective search space used: 86725964
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 48 (23.4 bits)