GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001494-TA|BGIBMGA001494-PA|IPR005033|YEATS,
IPR002052|N-6 Adenine-specific DNA methylase
         (979 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    29   0.59 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    29   0.78 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.78 
L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    26   4.2  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    26   4.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   4.2  

>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score = 29.1 bits (62), Expect = 0.59
 Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 55  PDEDNNA-YITTAISVASLLTENLLSHPFIVLRRQCQVHNNLRNYHIVPYTLLPVVVRLH 113
           PD  N + +++ AI+        ++S+PF  +RR+  + +      ++    L   V++ 
Sbjct: 205 PDPKNTSIFVSWAIAQVVTTASGIISYPFDTVRRRMMMQSGRAKSEVMYKNTLDCWVKIG 264

Query: 114 RRQDVTTLWKGIGSTCIVRG 133
           +++     +KG  S  ++RG
Sbjct: 265 KQEGSGAFFKGAFSN-VLRG 283


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 28.7 bits (61), Expect = 0.78
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)

Query: 898 DNGVSSSLGEDAELGDISPDYMEQLRDLQQRIMKIKNNED-----LERVVNLIAETGRYE 952
           +N +       AEL +   D  EQL   QQ  MK+K  E        R+VN+  E  ++E
Sbjct: 639 ENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKCKELTARLVNVDEEKVKFE 698

Query: 953 VTTQT 957
            + +T
Sbjct: 699 RSCRT 703


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 0.78
 Identities = 13/55 (23%), Positives = 29/55 (52%)

Query: 491 KDEREKNRPDKVKTPSKDQEKIKEKASKRPSDRPASPDAVKKRCLSPIGRSTSSP 545
           K+ERE+ + +K +   + +EK +E+ + R  +R    +  ++R +  +  S   P
Sbjct: 495 KEERERQQREKEQREREQREKEREREAARERERERERERERERMMHMMPHSLPRP 549


>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 55  PDEDNNA-YITTAISVASLLTENLLSHPFIVLRRQCQVHNNLRNYHIVPYTLLPVVVRLH 113
           PD  N + +++ AI+        ++S+PF  +RR+  + +      ++    L   V++ 
Sbjct: 205 PDPKNTSIFVSWAIAQVVTTASGIISYPFDTVRRRMMMQSWPCKSEVMYKNTLDCWVKIG 264

Query: 114 RRQDVTTLWKGIGSTCIVRG 133
           +++     +KG  S  ++RG
Sbjct: 265 KQEGSGAFFKGAFSN-VLRG 283


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 55  PDEDNNA-YITTAISVASLLTENLLSHPFIVLRRQCQVHNNLRNYHIVPYTLLPVVVRLH 113
           PD  N + +++ AI+        ++S+PF  +RR+  + +      ++    L   V++ 
Sbjct: 205 PDPKNTSIFVSWAIAQVVTTASGIISYPFDTVRRRMMMQSWPCKSEVMYKNTLDCWVKIG 264

Query: 114 RRQDVTTLWKGIGSTCIVRG 133
           +++     +KG  S  ++RG
Sbjct: 265 KQEGSGAFFKGAFSN-VLRG 283


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 223  IWAIVLPTVALGVSKYISHVRMSPIRVNFEIGHEATL--KPKKTPDG 267
            +W +    +   + K+ S V  SPIR   E+  E     KP+K  DG
Sbjct: 2164 VWKVYRKMMGPEIEKFSSSVPKSPIRELLEMEPETAKFGKPEKLTDG 2210


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.134    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,504
Number of Sequences: 2123
Number of extensions: 31418
Number of successful extensions: 43
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 38
Number of HSP's gapped (non-prelim): 8
length of query: 979
length of database: 516,269
effective HSP length: 71
effective length of query: 908
effective length of database: 365,536
effective search space: 331906688
effective search space used: 331906688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 52 (25.0 bits)