BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001494-TA|BGIBMGA001494-PA|IPR005033|YEATS, IPR002052|N-6 Adenine-specific DNA methylase (979 letters) Database: bee 429 sequences; 140,377 total letters Searching.....................................................done Score E Sequences producing significant alignments: (bits) Value AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 28 0.43 AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 9.2 AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 23 9.2 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 27.9 bits (59), Expect = 0.43 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 6/72 (8%) Query: 496 KNRPDKVKTPSKDQEKIKEKASKRPSDRPASPDAVKKRCLSPI---GRSTSSPLRANSVA 552 K++P D+E I S SP++ ++C+SPI G S S S Sbjct: 556 KSKPPVATMYGSDEEIIN---SSNDEGGKTSPNSAVRKCMSPINGSGASGSGSAENLSSG 612 Query: 553 SNKEEYKPARQN 564 SN + +R+N Sbjct: 613 SNNQTSSASREN 624 >AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methyltransferase protein. Length = 683 Score = 23.4 bits (48), Expect = 9.2 Identities = 8/40 (20%), Positives = 22/40 (55%) Query: 911 LGDISPDYMEQLRDLQQRIMKIKNNEDLERVVNLIAETGR 950 L + + ++ L ++++ NN+D+E+ +N + G+ Sbjct: 288 LEEFERNRLQLLESFKRKVNFYPNNQDIEKFLNYLKRGGK 327 >AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-synthase protein. Length = 504 Score = 23.4 bits (48), Expect = 9.2 Identities = 11/29 (37%), Positives = 17/29 (58%) Query: 947 ETGRYEVTTQTFDFDLCLLDRSTVQQLIQ 975 E G YEV +DF +LDR+ + + I+ Sbjct: 255 EVGFYEVEGIGYDFIPTVLDRNVIDKWIK 283 Database: bee Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 140,377 Number of sequences in database: 429 Lambda K H 0.315 0.134 0.392 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 245,309 Number of Sequences: 429 Number of extensions: 9769 Number of successful extensions: 18 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 15 Number of HSP's gapped (non-prelim): 4 length of query: 979 length of database: 140,377 effective HSP length: 64 effective length of query: 915 effective length of database: 112,921 effective search space: 103322715 effective search space used: 103322715 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (22.0 bits) S2: 48 (23.4 bits)
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