Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001494-TA|BGIBMGA001494-PA|IPR005033|YEATS,
IPR002052|N-6 Adenine-specific DNA methylase
(979 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g45600.1 68418.m05603 YEATS family protein contains Pfam doma... 71 4e-12
At2g18000.1 68415.m02092 YEATS family protein contains Pfam doma... 71 5e-12
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 35 0.23
At3g47910.1 68416.m05224 expressed protein low similarity to non... 35 0.30
At1g62320.1 68414.m07032 early-responsive to dehydration protein... 33 0.93
At5g60030.1 68418.m07527 expressed protein 33 1.2
At5g63550.1 68418.m07976 expressed protein 32 1.6
At2g30920.1 68415.m03769 hexaprenyldihydroxybenzoate methyltrans... 32 2.1
At1g51070.1 68414.m05741 basic helix-loop-helix (bHLH) family pr... 32 2.1
At1g63640.1 68414.m07197 kinesin motor protein-related C-termina... 31 3.7
At4g33410.1 68417.m04748 signal peptide peptidase family protein... 30 6.5
At4g00895.1 68417.m00121 ATP synthase delta chain-related contai... 30 6.5
At1g73510.1 68414.m08510 hypothetical protein 30 6.5
At5g43160.1 68418.m05268 expressed protein contains Pfam profil... 30 8.7
>At5g45600.1 68418.m05603 YEATS family protein contains Pfam domain
PF03366: YEATS family
Length = 268
Score = 70.9 bits (166), Expect = 4e-12
Identities = 35/100 (35%), Positives = 55/100 (55%)
Query: 247 IRVNFEIGHEATLKPKKTPDGFTHDWEVFVRGQEGVDISHFINKVVFHLHHTFLKPRRVV 306
I V G+ A KK + +H W V+VRG DIS + KVVF LH +F P RV+
Sbjct: 44 ISVPIVYGNVAFWLGKKASEYQSHKWAVYVRGATNEDISVVVKKVVFQLHSSFNSPTRVI 103
Query: 307 KDPPFSIKESGYAGFTLPIEIYLKNKDEPKKITFSYNLTL 346
++PPF + ESG+ F + + ++ + K ++ ++L L
Sbjct: 104 EEPPFEVSESGWGEFEIAMTLHFHSDVCDKPLSLYHHLKL 143
>At2g18000.1 68415.m02092 YEATS family protein contains Pfam domain
PF03366: YEATS family
Length = 202
Score = 70.5 bits (165), Expect = 5e-12
Identities = 33/85 (38%), Positives = 47/85 (55%)
Query: 262 KKTPDGFTHDWEVFVRGQEGVDISHFINKVVFHLHHTFLKPRRVVKDPPFSIKESGYAGF 321
KK + TH W V+VRG D+ I +V+FHLH +F P RVV PPF++ E G+ F
Sbjct: 55 KKATEYRTHKWTVYVRGATNEDLGVVIKRVIFHLHPSFNNPTRVVDAPPFALSECGWGEF 114
Query: 322 TLPIEIYLKNKDEPKKITFSYNLTL 346
+ I ++ KK+ S+ L L
Sbjct: 115 KIDITVFFHTDVCEKKLELSHVLKL 139
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 491 KDEREKNRPDKVKTPSKDQE------KIKEKASKRPSDRPASPDAVKKRCLSPI 538
K+ +EK + DK++ KD+E K KE+ +K D+ S A + R LSP+
Sbjct: 91 KERKEKEKKDKLEKEKKDKERKEKERKEKERKAKEKKDKEESEAAARYRILSPL 144
>At3g47910.1 68416.m05224 expressed protein low similarity to
nonmuscle myosin heavy chain (NMHC) [Homo sapiens]
GI:189036; contains Pfam profiles PF04780: Protein of
unknown function (DUF629), PF04781: Protein of unknown
function (DUF627)
Length = 1290
Score = 34.7 bits (76), Expect = 0.30
Identities = 21/86 (24%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 491 KDEREKNRPDKVKTPSK--DQEKIKEKASKRPSDRPASPDAVKKRCL--SPIGRSTSSPL 546
+++ KN +K K K D K+K+ + SD ++ D+V+ L +P+G + + +
Sbjct: 943 RNDNSKNTLEKSKDKKKIKDTRKVKDMKATIGSDHRSNADSVEHSPLPVAPVGDHSEADI 1002
Query: 547 RANSVASNKEEYKPARQNLELLDHKK 572
+ +V + KEE + ++ +EL + ++
Sbjct: 1003 VSEAVEALKEEEEEYKRQIELEEEER 1028
>At1g62320.1 68414.m07032 early-responsive to dehydration
protein-related / ERD protein-related similar to ERD4
protein (early-responsive to dehydration stress)
[Arabidopsis thaliana] GI:15375406; contains Pfam
profile PF02714: Domain of unknown function DUF221
Length = 769
Score = 33.1 bits (72), Expect = 0.93
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 157 SVLQFVQHIALKSLSLALITPFYSASLVETVQSDIASDKPALFDVFREGFVRILEWGTPS 216
+V +FV HIA L+ I P + +++ I P L + + ++ L G
Sbjct: 369 TVRRFVMHIAFFFLTFFFIIPIAFVQSLASIEG-IEKSAPFLSPIVKNKLMKSLIQGF-L 426
Query: 217 KGRMLPIWAIVLPTVALGVSKYISHVRMSPI 247
G +L ++ I LPT+ + +SK+ + +S +
Sbjct: 427 PGIVLKLFLIFLPTILMIMSKFEGFISISSL 457
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 490 TKDEREKNRPDKVKTPSKDQEKIKEKASKRPSDRPASPDAVKKRCLSPIGRSTSSPLRAN 549
+++ RE+ + K K +KD++ + EK ++ D S D +++ + S
Sbjct: 143 SEERRERKKEKKKKKNNKDEDVVDEKVKEKLEDEQKSADRKERK------KKKSKKNNDE 196
Query: 550 SVASNKEEYKPARQNLELLDHKK 572
V KE+ + +++ E+ + KK
Sbjct: 197 DVVDEKEKLEDEQKSAEIKEKKK 219
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 32.3 bits (70), Expect = 1.6
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 491 KDEREKNRPDKVKTPSKDQEKIKEKASKRPSDR-PASPDAVK--KRCLSPIGRSTSSPL- 546
KDE E +P K K+ SK + ++E + + D+ P++ + + ++ I +STSSP
Sbjct: 328 KDEVEVEKPSKKKSSSK--KTVEESSGSKGKDKQPSAKGSARSGEKSSKQIAKSTSSPAK 385
Query: 547 --RANSVASNKEEYK 559
+ + V S+KE+ K
Sbjct: 386 KQKVDHVESSKEKSK 400
>At2g30920.1 68415.m03769 hexaprenyldihydroxybenzoate
methyltransferase identical to
hexaprenyldihydroxybenzoate methyltransferase SP:O49354
from [Arabidopsis thaliana]
Length = 322
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/62 (35%), Positives = 28/62 (45%)
Query: 733 IPKERLLPEPTSPISIDTASQCSSKSGVAKPMLLEGEEINSSQSDSENSVICEDDEPKIV 792
IP RLL + S AS S S K LEG+ N S+S S + + ED+ K
Sbjct: 26 IPPSRLLHQRLFSTSDTDASAASFSSSHPKIQTLEGKASNKSRSTSSTTSLNEDELAKFS 85
Query: 793 KI 794
I
Sbjct: 86 AI 87
>At1g51070.1 68414.m05741 basic helix-loop-helix (bHLH) family
protein similar to bHLH transcription factor GI:3757520
from [Arabidopsis thaliana]
Length = 226
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 330 KNKDEPKKITFSYNLTLQQNGFLKDRYIFKNPSDEFSKKLLKGGGIPCTNSELYTNPDQE 389
+N P +I S ++++ +GFL D + K PS S+K +K +NS+ +
Sbjct: 23 QNPTFPWQIDGSATVSVEVDGFLCDADVIKEPS---SRKRIKTESCTGSNSKACREKQRR 79
Query: 390 SRSRDSFTD 398
R D FT+
Sbjct: 80 DRLNDKFTE 88
>At1g63640.1 68414.m07197 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1064
Score = 31.1 bits (67), Expect = 3.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 498 RPDKVKTPSKDQEKIKEKASKRPSDRPASPDAVKKRCLSPIGRSTSSPLRANSVASNKEE 557
RP+ T K ++ +K P DR P + K+ L P G++ S L + +S+K
Sbjct: 985 RPEARMTSEKLEKSVK-MGKTEPKDRTNIPSKIPKQTLKPPGQTRPSRLSIATSSSSKAL 1043
Query: 558 YKPARQNLELLDHKKP 573
R + KP
Sbjct: 1044 TGAKRPTISTSSSAKP 1059
>At4g33410.1 68417.m04748 signal peptide peptidase family protein
contains Pfam domain PF04258: Membrane protein of
unknown function (DUF435)
Length = 372
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 99 HIVPYTLLPVVVRLHRRQDVTTLWKG 124
++VP TL PV+ RR+D+ LW+G
Sbjct: 332 YLVPSTLGPVIFMSWRRKDLAELWEG 357
>At4g00895.1 68417.m00121 ATP synthase delta chain-related contains
weak similarity to Swiss-Prot:P32980 ATP synthase delta
chain, chloroplast precursor [Nicotiana tabacum]
Length = 191
Score = 30.3 bits (65), Expect = 6.5
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 286 HFINKVVFHLHHTFLKPRRVVKDPPFSIKESGYAGFTLPIEIYLKNKD 333
+F+ + FHL T KP RVV PP + + +GF + ++K+
Sbjct: 66 NFLKAISFHLPQT--KPSRVVTPPPPPVHDKAASGFAAALVSVCQSKN 111
>At1g73510.1 68414.m08510 hypothetical protein
Length = 155
Score = 30.3 bits (65), Expect = 6.5
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 762 KPMLLEGEEINS--SQSDSENSVICEDDEPKIVKIEP 796
KP L++ +NS SQ ++ +I +DDE K V +EP
Sbjct: 31 KPYLVDSLTLNSWASQPSTDEIIIIDDDEEKEVTLEP 67
>At5g43160.1 68418.m05268 expressed protein contains Pfam profile:
PF04484 family of unknown function (DUF566)
Length = 445
Score = 29.9 bits (64), Expect = 8.7
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 495 EKNRPDKVKTPSKDQE-KIKEKASKRPSDRPAS-PDAVKKRCLSPIGRSTSSPLRANSVA 552
++N+P + S ++ K ++ AS+ + + KRC SPI + P+ +SVA
Sbjct: 18 KQNKPPSFPSESSNRRPKTRDVASRYLGGTSSFFHQSSPKRCQSPI---VTRPVTPSSVA 74
Query: 553 SNKEEYKPARQNLE 566
+N+ + P R++L+
Sbjct: 75 TNRPQSTPRRESLD 88
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.134 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,876,647
Number of Sequences: 28952
Number of extensions: 795817
Number of successful extensions: 2005
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1996
Number of HSP's gapped (non-prelim): 16
length of query: 979
length of database: 12,070,560
effective HSP length: 88
effective length of query: 891
effective length of database: 9,522,784
effective search space: 8484800544
effective search space used: 8484800544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 64 (29.9 bits)
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