Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001493-TA|BGIBMGA001493-PA|IPR002035|von Willebrand
factor, type A, IPR013608|VWA N-terminal, IPR004010|Cache
(1174 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24) 81 7e-15
SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09) 56 2e-07
SB_36378| Best HMM Match : PI3K_rbd (HMM E-Value=2.4) 56 2e-07
SB_34994| Best HMM Match : PI3K_rbd (HMM E-Value=2.4) 56 2e-07
SB_54257| Best HMM Match : Cache (HMM E-Value=4.4e-09) 48 4e-05
SB_28675| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.063
SB_52126| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.44
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.4
SB_52884| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.8
SB_54638| Best HMM Match : Cache (HMM E-Value=0.0031) 33 1.8
SB_30982| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.4
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.4
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 32 3.1
SB_58420| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.1
SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0) 31 4.1
SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.5
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.2
SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 9.6
>SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24)
Length = 1592
Score = 80.6 bits (190), Expect = 7e-15
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 215 KVSLQTSSVYVSLEVFECDPKVMKHIYWTEGLLSTFKKNYAQDATTDFQYFCSAKGFLRH 274
+VS S++ +S +V D +++ +YW+ L FKKN A D +Q F S +G LR
Sbjct: 2 RVSKSKSAIKISDQVVRNDKNLIETVYWSSKLDEMFKKNLADDPELRWQNFGSVEGVLRQ 61
Query: 275 YPAALWDDMHQLKLNTDDVYDCRLRSWYVSAGGAPRDVLVLLDASGSMNGSSNQVIAEEF 334
YP++ W + + D YD R+R WY+ A P+D++++LD S SM G + +A+E
Sbjct: 62 YPSSEW-QTNFAGFHID--YDPRMRPWYIGATSGPKDIVIILDCSLSMKGKRLR-MAKEI 117
Query: 335 XXXXXXXXXXXXQVNVL 351
VNV+
Sbjct: 118 AKTVLNTLTKQDFVNVI 134
Score = 34.7 bits (76), Expect = 0.44
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 584 LEISVSVPVFDATTAEYPVNRLLGVAGVDIPIDHLKLILPYHQLGAGGSIILVDHRGNVV 643
L ++V++PV T NR +GV G+D ++ ++ IL Q G+ + L++ G +
Sbjct: 289 LMVTVAMPVTSKLT-----NRTIGVVGIDATLEEIENILQNDQWGSVYA-FLINDEGETI 342
Query: 644 LHDNLKPT 651
H L+P+
Sbjct: 343 FHPLLRPS 350
>SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09)
Length = 916
Score = 55.6 bits (128), Expect = 2e-07
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 206 LNESNHFDGKVSLQTSSVYVSLEVFECDPKVMKHIYWTEGLLSTFKKNYAQDATTDFQYF 265
L + F KV+L V +S +PK ++ + +L T K+N + T +QYF
Sbjct: 68 LKYDSRFRTKVNLDEMCVIIS-GAASSNPKQLQ-----DNVLQTMKQNIENNPTLTWQYF 121
Query: 266 CSAKGFLRHYPAALWDDMHQLKLNTDDVYDCRLRSWYVSAGG-APRDVLVLLDASGSMNG 324
S +G +YP + D ++ YD R R WYV A P+DV++++D SGSM G
Sbjct: 122 GSEEGLYTNYPM-IRDS------SSCSSYDPRYRPWYVEAASPQPKDVILVVDYSGSMGG 174
Query: 325 SSNQVIAE 332
S + E
Sbjct: 175 SRLPIAKE 182
>SB_36378| Best HMM Match : PI3K_rbd (HMM E-Value=2.4)
Length = 247
Score = 55.6 bits (128), Expect = 2e-07
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 206 LNESNHFDGKVSLQTSSVYVSLEVFECDPKVMKHIYWTEGLLSTFKKNYAQDATTDFQYF 265
L + F KV+L V +S +PK ++ + +L T K+N + T +QYF
Sbjct: 119 LKYDSRFRTKVNLDEMCVIIS-GAASSNPKQLQ-----DNVLQTMKQNIENNPTLTWQYF 172
Query: 266 CSAKGFLRHYPAALWDDMHQLKLNTDDVYDCRLRSWYVSAGG-APRDVLVLLDASGSMNG 324
S +G +YP + D ++ YD R R WYV A P+DV++++D SGSM G
Sbjct: 173 GSEEGLYTNYPM-IRDS------SSCSSYDPRYRPWYVEAASPQPKDVILVVDYSGSMGG 225
Query: 325 SSNQVIAE 332
S + E
Sbjct: 226 SRLPIAKE 233
>SB_34994| Best HMM Match : PI3K_rbd (HMM E-Value=2.4)
Length = 244
Score = 55.6 bits (128), Expect = 2e-07
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 206 LNESNHFDGKVSLQTSSVYVSLEVFECDPKVMKHIYWTEGLLSTFKKNYAQDATTDFQYF 265
L + F KV+L V +S +PK ++ + +L T K+N + T +QYF
Sbjct: 68 LKYDSRFRTKVNLDEMCVIIS-GAASSNPKQLQ-----DNVLQTMKQNIENNPTLTWQYF 121
Query: 266 CSAKGFLRHYPAALWDDMHQLKLNTDDVYDCRLRSWYVSAGG-APRDVLVLLDASGSMNG 324
S +G +YP + D ++ YD R R WYV A P+DV++++D SGSM G
Sbjct: 122 GSEEGLYTNYPM-IRDS------SSCSSYDPRYRPWYVEAASPQPKDVILVVDYSGSMGG 174
Query: 325 SSNQVIAE 332
S + E
Sbjct: 175 SRLPIAKE 182
>SB_54257| Best HMM Match : Cache (HMM E-Value=4.4e-09)
Length = 820
Score = 48.0 bits (109), Expect = 4e-05
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 233 DPKVMKHIYWTEGLLSTFKKNYAQDATTDFQYFCSAKGFLRHYPAALWDDMHQLKLNTDD 292
+PK I L++TF+ N + +QYF ++ G +PA+ N
Sbjct: 144 NPKDSGIIQGENSLVNTFRNNLVDSSVISWQYFGTSTGNYLQFPAS------GKVCNGSS 197
Query: 293 VYDCRLRSWYVSAGGAPR-DVLVLLDASGSMNGSSNQVIAEEFXXXXXXXXXXXXQVNVL 351
+D R +SWYV A R +++V++D S SM+ + +A + +V V+
Sbjct: 198 SFDPRFQSWYVEAVTRMRTNIVVVIDRSSSMSTAGRMALARQAAVTVLDTLGPNDKVGVV 257
Query: 352 YFNEKVNSLIQCFNQKMVPA 371
F+ + CF + A
Sbjct: 258 AFSHFIIKPPGCFGGNVAEA 277
>SB_28675| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 37.5 bits (83), Expect = 0.063
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 9/62 (14%)
Query: 262 FQYFCSAKGFLRHYPAALWDDMHQLKLNTDDVYDCRLRSWYVSAG-GAPRDVLVLLDASG 320
+Q+F S +G YPAA + H YD RLR WY SA + + ++++LD S
Sbjct: 6 WQFFGSKEGLCTIYPAAPLKECH--------AYDNRLRPWYTSAAYPSTKKLVIVLDTSS 57
Query: 321 SM 322
SM
Sbjct: 58 SM 59
>SB_52126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 34.7 bits (76), Expect = 0.44
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 221 SSVYVSLEVFECDPKVMKHIYWTEGLLSTFKKNYAQDATTDFQYFCSAKGFLRHYP 276
S+V+V +V++ ++ WTEGL F++N ++ + +Q ++ G R YP
Sbjct: 4 STVHVPTDVYKGSKVILNSAKWTEGLDKYFRENMEKEPSLLWQLAGTSTGVYRAYP 59
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 33.1 bits (72), Expect = 1.4
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 95 RLSE-VFFEIESKLVKREELLSAFSDAMMVARNGTALVNKAADALEDLLTRRVKAAENIM 153
RLSE E E K K E LS V +GT V DAL+ + R K+ +
Sbjct: 2335 RLSEDKLHEAEQKFEKLEVALSQLESISEVFHSGTENV----DALKKEIRDRDKSIGELT 2390
Query: 154 RKAEELDKDETPPPDNYVFDHSVDLDKIKEKKIPNQKGWFMPQNCTNLQKVPLNESNHFD 213
K E L+KD + Y +K+K++ Q+ + +N +QK+ L+E+
Sbjct: 2391 EKIETLEKDNSSVQSEY----KETKEKLKKRSSSLQEKLGVSKNF--MQKI-LDENEELK 2443
Query: 214 GKVS 217
G+++
Sbjct: 2444 GRIA 2447
>SB_52884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 285 QLKLNTDDVYDCRLRSWYVSAGGAPRDVLVLLDASGSMNGSSNQVIAEEF 334
+LK+NT V D W++++ G D+ L D + S GS +++ + F
Sbjct: 52 ELKMNTVHVEDVCRALWHLTSHGESGDIFNLADKADSTQGSITELVCQIF 101
>SB_54638| Best HMM Match : Cache (HMM E-Value=0.0031)
Length = 598
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 302 YVSAGGAPRDVLVLLDASGSMNG 324
Y+ +P+DV++++DASGSM G
Sbjct: 2 YIQGATSPKDVIIMVDASGSMRG 24
>SB_30982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 295 DCRLRSWYVSAGGAPRDVLVLLDASGSMN 323
D RLR WY+ P+++++L D S +MN
Sbjct: 33 DQRLRPWYILGVRGPKNIIILFDISYAMN 61
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 32.3 bits (70), Expect = 2.4
Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Query: 41 EKHEDALSEVLKHKTGVNPIKITNVTQAXXXXXXXXXXXILRMISTKSIENWAQRLSEVF 100
E+ E L EV+KH+ + S S+E ++ V
Sbjct: 2355 ERQEVKLHEVIKHERAQRSELEAEHNTVLSRCESLQNDLVKAKESISSLEQEQEKTQRVK 2414
Query: 101 FEIESKLVKREELLSAFSDAMMVARNGTA-LVNKAADALEDLLTRRVKAAENIMRKAE 157
++E++L++ S+F+D +MVAR L ++ +A+++ R K +++ M ++
Sbjct: 2415 DDMETRLLELANANSSFNDELMVARRDLGELEDRYKEAVQEEEELRQKLSKSSMENSK 2472
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 379 MMEELREYTKVNETKVDYALK-YAIKLLRKQRLIRDRPKSCQQAIVLLTDSMYDNYTDLV 437
+ +E R+ T N++ VD+ +K KL R+ R+ SC + IV +T+ D++ D+V
Sbjct: 474 VFDESRQIT--NDSLVDFVMKSMTSKLERRLRIPPPSGISCSREIVCVTEVTTDSFDDIV 531
Query: 438 RHLDPGNNIRLFVFW 452
+ D + + W
Sbjct: 532 INNDQDVLLVFYTPW 546
>SB_58420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 804 FAMKKLNHIFSPIPPLLLEKTYQCDEGLMARLCKDAIATDKWAREHEHPHRARDCSTCE 862
F +KK +++ L L K QC L + +++ ++ +++H R CSTCE
Sbjct: 460 FVLKKKYYMYCTYICLNLTKFSQCR--LFGAIFDNSLGKTRYRSQYKHTRRRHPCSTCE 516
>SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1182
Score = 31.5 bits (68), Expect = 4.1
Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 1/150 (0%)
Query: 48 SEVLKHKTGVNPIKITNVTQAXXXXXXXXXXXILRMISTKSIENWAQRLSEVFFEIESKL 107
++VL V+P +IT + Q + TK A+ L E K
Sbjct: 871 NKVLNMTLSVSPDQITKLAQDIREAWKSLTGVDEILEKTKQNLTRAEDLKRRAEEAREKA 930
Query: 108 VKREELLSAFSDAMMVARNGTALVNKAADALEDLLTRRVKAAENIMRKAEELDKDETPPP 167
+ +++ +DA+ +A NG L A ED + + ++ + L+K +
Sbjct: 931 LTVSDVIQNVTDALDMAANGQQLAKDAIQLAEDDIVESQGILDALLPLLDALEK-KVNAA 989
Query: 168 DNYVFDHSVDLDKIKEKKIPNQKGWFMPQN 197
+N DL +K+ N K M ++
Sbjct: 990 ENTTNQVKTDLPAVKDAFDKNAKNLTMAED 1019
>SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1916
Score = 31.1 bits (67), Expect = 5.5
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 381 EELREYTKVNETKVDYALKYAIKLLRKQRLI-RDRPKSCQQAIVLLTDSMYDNYTDLVRH 439
E+++EY K +TK L++ ++ L+ R P + + L DS+ D + DLV
Sbjct: 1393 EKMKEYMKTLKTKKFSKLEFCLRHPYTIALVERGAPPTKLVGMALPIDSVVDLHNDLVSD 1452
Query: 440 LDPGNNIRLFVFWLHDRYG 458
N +R L RYG
Sbjct: 1453 YIINNELRTLCGSLSLRYG 1471
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 102 EIESKLVKREELLSAFSDAMMVARNGTALVNKAADALEDLLTRRVKAAENIMRKAEELDK 161
E+E KLV RE + + + + + G+ + K +LE+ L +KA I + E LD
Sbjct: 792 EVEGKLVTRESEVKSLREELTRMQQGSEELKKKIASLEESL---IKANNEIGKSQESLDS 848
Query: 162 DETPP 166
P
Sbjct: 849 IHNSP 853
>SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1401
Score = 30.3 bits (65), Expect = 9.6
Identities = 29/147 (19%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Query: 17 RSTESVKHKNVLQ--NRTVAEVKNSLEKHEDALSEVLKHKTGVNPIKITNVTQAXXXXXX 74
+S + + K+++ N+ + +K + + ++A+ ++ + K G+ + QA
Sbjct: 115 KSAQQAELKSIINDLNKHLEAMKTQVAQQQEAIGQLQQEKEGLEQRLQESHDQATQGNQQ 174
Query: 75 XXXXXILRMISTKSIENWAQRLSEVFFEIESKLVKREELLSAFSDAMMVARNGTALVNKA 134
+ E +RLSE +E ++ K L +D ++ A + K
Sbjct: 175 LQGTQDALHREKANAETLRKRLSE----LEGQVAKGSSLEPLLADTKARLKSAEAEIEKL 230
Query: 135 ADALEDLLTRRV---KAAENIMRKAEE 158
DA++ L + +AAE+ +RK +E
Sbjct: 231 RDAIDRLKQQNQADRRAAEDRIRKEQE 257
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,310,395
Number of Sequences: 59808
Number of extensions: 1466871
Number of successful extensions: 3303
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3277
Number of HSP's gapped (non-prelim): 34
length of query: 1174
length of database: 16,821,457
effective HSP length: 90
effective length of query: 1084
effective length of database: 11,438,737
effective search space: 12399590908
effective search space used: 12399590908
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
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