BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001493-TA|BGIBMGA001493-PA|IPR002035|von Willebrand factor, type A, IPR013608|VWA N-terminal, IPR004010|Cache (1174 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 33 1.8 06_01_0144 + 1089090-1091390 32 3.1 03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238 31 4.1 01_05_0500 + 22752190-22752329,22752957-22753032,22753292-227533... 31 4.1 11_01_0272 - 2042490-2042781,2043146-2043203,2043385-2043401,204... 30 9.5 05_01_0133 + 895107-895280,895960-896271,896815-897081,897161-89... 30 9.5 02_02_0274 + 8464207-8464534,8464646-8464908,8465024-8465506,846... 30 9.5 02_02_0273 - 8457871-8458296,8458391-8458873,8458989-8459251,845... 30 9.5 >02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842, 31029955-31030017,31031597-31031704,31031772-31031836, 31031928-31032015,31032104-31032157,31032234-31032380, 31033358-31033429,31034077-31034226,31034317-31034430, 31034762-31034875,31035925-31036077,31037437-31037529, 31038202-31038318,31038984-31039086,31039192-31039376, 31039448-31039522,31040451-31040534,31041547-31041588, 31041668-31041847,31042109-31042162,31042239-31042280, 31042869-31042967,31043040-31043174,31043325-31043427, 31045061-31045134,31045227-31045270,31045393-31045471, 31045592-31045705,31045842-31045946,31046027-31046161, 31046447-31046546,31046870-31046883,31046936-31047004, 31047079-31047182,31047299-31047347,31047931-31048023, 31048102-31048210,31048619-31048755,31048851-31048928, 31049015-31049104,31049402-31049467,31049546-31049638, 31049711-31049839,31050024-31050122,31051366-31051512, 31051605-31051910 Length = 2050 Score = 32.7 bits (71), Expect = 1.8 Identities = 12/29 (41%), Positives = 21/29 (72%) Query: 30 NRTVAEVKNSLEKHEDALSEVLKHKTGVN 58 N+ +V+ S+EKH A+ EV++H TG++ Sbjct: 1536 NQERKQVEESIEKHRQAVKEVIEHYTGIS 1564 >06_01_0144 + 1089090-1091390 Length = 766 Score = 31.9 bits (69), Expect = 3.1 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Query: 803 NFAM-KKLNHIFSPIPPLLLEKTYQCDEGLMARLCKDAIAT 842 +FA+ K L F +PP +++T +C + ++ +CKDA AT Sbjct: 288 SFALFKLLRRRFENLPPATMKETDECRDLILDGMCKDAQAT 328 >03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238 Length = 697 Score = 31.5 bits (68), Expect = 4.1 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 2/98 (2%) Query: 725 RRVLDHYTVVVALPNPDAHWAGSESQFTMKLAEAALKSLSRTDFAVQP--DWLYCRHVEP 782 +R+LD VVV A Q A A+ DF ++ D + ++ Sbjct: 386 KRLLDAAEVVVDRLLEHGSGAEMTRQAVRDAARGAIGDTGLLDFVIKSLGDTIVGNYIVR 445 Query: 783 HFDSREAEVLHFIRRRSDEPNFAMKKLNHIFSPIPPLL 820 E VLHF +EP A+ + +P+PP++ Sbjct: 446 RVPDAETRVLHFSLEEYEEPTPALLDVEVECTPLPPVV 483 >01_05_0500 + 22752190-22752329,22752957-22753032,22753292-22753351, 22754718-22754882,22756299-22756358 Length = 166 Score = 31.5 bits (68), Expect = 4.1 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 7/71 (9%) Query: 616 DHLKLILPYHQLGAGGSIILVDHRGNVVLHDNLKPTFDGDVLRPGYRTVDFLDLEQPAVS 675 DHL L L QL ++ +++ ++ H L+P D P Y + ++L +P Sbjct: 42 DHLDLSLTVQQLSGNLPVLRLEY---LLTHQGLQPMLDA----PVYGRIATIELFRPCTD 94 Query: 676 HLPRQYLPDWL 686 L R Y W+ Sbjct: 95 ELSRDYNITWM 105 >11_01_0272 - 2042490-2042781,2043146-2043203,2043385-2043401, 2043572-2043765,2043858-2043974,2044059-2044224, 2044430-2044597,2044741-2046047 Length = 772 Score = 30.3 bits (65), Expect = 9.5 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 158 ELDKDETPPPDNYVFDHSVDLDKIKEKKIPNQKGWFMPQNCTNLQKVPLNES 209 +LDKD + PDN + L+ + +K P + G MP N+ K P +ES Sbjct: 652 QLDKDYSSSPDNETTQTA--LEDEERRKAPVKLGISMPSRVENVVKNPESES 701 >05_01_0133 + 895107-895280,895960-896271,896815-897081,897161-897265 Length = 285 Score = 30.3 bits (65), Expect = 9.5 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 1006 SSAALMVPSILKSLWRSIALVLRVAQEFIGLLTIVNAAGTIRNHLNVKLQSSISLGSVGA 1065 ++ + VP+ L S+W S+ L L QE G + ++ N L+ + LGSV A Sbjct: 188 AARGITVPTNLPSVWNSLQLQL---QEMHGASGVSVEGSFFQSIFNGLLKEGVVLGSVRA 244 Query: 1066 GV 1067 GV Sbjct: 245 GV 246 >02_02_0274 + 8464207-8464534,8464646-8464908,8465024-8465506, 8465601-8466026 Length = 499 Score = 30.3 bits (65), Expect = 9.5 Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Query: 592 VFDATTAEYPVNRLLGVAGVDIPIDHLKLILPYHQLGAGGSIILVDHRGNVVLHDNL-KP 650 + + ++P+ L+ ++ + + ++ P+ + A + ++ R V + N K Sbjct: 333 ITSVNSQKFPILNLIQMSATRVNLYQNAILSPFWNVNAHSLVYMIQGRSRVQVVSNFGKT 392 Query: 651 TFDGDVLRPG 660 FDG VLRPG Sbjct: 393 VFDG-VLRPG 401 >02_02_0273 - 8457871-8458296,8458391-8458873,8458989-8459251, 8459363-8459690 Length = 499 Score = 30.3 bits (65), Expect = 9.5 Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Query: 592 VFDATTAEYPVNRLLGVAGVDIPIDHLKLILPYHQLGAGGSIILVDHRGNVVLHDNL-KP 650 + + ++P+ L+ ++ + + ++ P+ + A + ++ R V + N K Sbjct: 333 ITSVNSQKFPILNLIQMSATRVNLYQNAILSPFWNVNAHSLVYMIQGRSRVQVVSNFGKT 392 Query: 651 TFDGDVLRPG 660 FDG VLRPG Sbjct: 393 VFDG-VLRPG 401 Database: rice Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.321 0.135 0.409 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 31,956,323 Number of Sequences: 37544 Number of extensions: 1287436 Number of successful extensions: 2806 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 2804 Number of HSP's gapped (non-prelim): 8 length of query: 1174 length of database: 14,793,348 effective HSP length: 90 effective length of query: 1084 effective length of database: 11,414,388 effective search space: 12373196592 effective search space used: 12373196592 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 65 (30.3 bits)
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