Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001493-TA|BGIBMGA001493-PA|IPR002035|von Willebrand
factor, type A, IPR013608|VWA N-terminal, IPR004010|Cache
(1174 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr... 107 5e-23
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr... 107 5e-23
Z49907-12|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p... 107 5e-23
Z49907-11|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p... 107 5e-23
L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated p... 82 3e-15
Z81579-6|CAB04654.3| 1305|Caenorhabditis elegans Hypothetical pr... 31 3.7
AY959881-1|AAX56914.1| 1305|Caenorhabditis elegans nephrocystin-... 31 3.7
AF003140-3|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ... 31 3.7
AF003140-2|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ... 31 3.7
Z32683-6|CAA83623.1| 728|Caenorhabditis elegans Hypothetical pr... 31 4.9
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 31 4.9
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans Hypothetical p... 31 4.9
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans Hypothetical p... 31 4.9
Z92825-8|CAB07316.2| 469|Caenorhabditis elegans Hypothetical pr... 30 8.5
Z75955-17|CAB00126.2| 469|Caenorhabditis elegans Hypothetical p... 30 8.5
>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 107 bits (257), Expect = 5e-23
Identities = 97/386 (25%), Positives = 169/386 (43%), Gaps = 23/386 (5%)
Query: 129 ALVNKAADALE-DLLTRRVKAAENIMRKAEELDKDETPPPDNYV-FDHSVDLDKIKEKKI 186
+LV + + L+ D+ +++ AAE + E LD+ T D S + +
Sbjct: 46 SLVQEEFEKLKPDIKSKKEDAAEKLRVATEHLDRLVTNRVDALKKLASSAEASAAVFDEY 105
Query: 187 PNQKGWFMPQ---NCTNLQKVPLNESN-HFDGKVSLQTSS--VYVSLEVFECDPKVMKHI 240
+Q + +PQ C K +NES+ HF + S +++++E ++CDP+VM+
Sbjct: 106 DDQ-AYAVPQADKRCEAYMK-KMNESDMHFVSNMVEHNSKSGIHITVESYQCDPRVMRDF 163
Query: 241 YWT--EGLLSTFKKNYAQDATTDFQYFCSAKGFLRHYPAALWDDMHQLKLNTDDVYDCRL 298
WT + L T N + QY + G R YP W + + T D++D R
Sbjct: 164 DWTGTKHLEKTMSDNKEKAPEMGHQYIGTYSGLTRMYPRRHWK-VEPTPI-TIDLFDPRF 221
Query: 299 RSWYVSAGGAPRDVLVLLDASGSMNGSSNQVIAEEFXXXXXXXXXXXXQVNVLYFNEKVN 358
R W+V+A P+D++ LLD SGS+ G + +I V YFN N
Sbjct: 222 RPWFVNAESVPKDIVFLLDYSGSVKGPTMHLIKITMMYILSTLSPNDYFFGV-YFNNHFN 280
Query: 359 SLIQCFNQKMVPANHVNSAAMMEELREYTKVNETKVDYALKYAIKLLR-----KQRLIRD 413
+I C N+ +PA N EEL + ++ LK+++ +LR Q L D
Sbjct: 281 PIISCANRTFMPATTSNKKVFFEELGMLEEKDQAHFATPLKFSLDVLRGNLDSNQSLFAD 340
Query: 414 RPKSCQQAIVLLTDSMYD-NYTDLVRHLDPGNNIRLFVFWLHDRYGLRDDTRRLAEWLSC 472
+ +++ TD + + + L N+ + +F YG L ++++C
Sbjct: 341 YRSEGHKLLIIFTDGVDEWPHQILDEEFQTRNSELIRIFGFSMGYG--TSLLPLQQYMAC 398
Query: 473 ARDGYFAELITHADVTEQVMSVLRVL 498
G ++E+ + DV Q ++ VL
Sbjct: 399 KSHGGYSEIDSIMDVKPQSRTIQNVL 424
>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 107 bits (257), Expect = 5e-23
Identities = 97/386 (25%), Positives = 169/386 (43%), Gaps = 23/386 (5%)
Query: 129 ALVNKAADALE-DLLTRRVKAAENIMRKAEELDKDETPPPDNYV-FDHSVDLDKIKEKKI 186
+LV + + L+ D+ +++ AAE + E LD+ T D S + +
Sbjct: 46 SLVQEEFEKLKPDIKSKKEDAAEKLRVATEHLDRLVTNRVDALKKLASSAEASAAVFDEY 105
Query: 187 PNQKGWFMPQ---NCTNLQKVPLNESN-HFDGKVSLQTSS--VYVSLEVFECDPKVMKHI 240
+Q + +PQ C K +NES+ HF + S +++++E ++CDP+VM+
Sbjct: 106 DDQ-AYAVPQADKRCEAYMK-KMNESDMHFVSNMVEHNSKSGIHITVESYQCDPRVMRDF 163
Query: 241 YWT--EGLLSTFKKNYAQDATTDFQYFCSAKGFLRHYPAALWDDMHQLKLNTDDVYDCRL 298
WT + L T N + QY + G R YP W + + T D++D R
Sbjct: 164 DWTGTKHLEKTMSDNKEKAPEMGHQYIGTYSGLTRMYPRRHWK-VEPTPI-TIDLFDPRF 221
Query: 299 RSWYVSAGGAPRDVLVLLDASGSMNGSSNQVIAEEFXXXXXXXXXXXXQVNVLYFNEKVN 358
R W+V+A P+D++ LLD SGS+ G + +I V YFN N
Sbjct: 222 RPWFVNAESVPKDIVFLLDYSGSVKGPTMHLIKITMMYILSTLSPNDYFFGV-YFNNHFN 280
Query: 359 SLIQCFNQKMVPANHVNSAAMMEELREYTKVNETKVDYALKYAIKLLR-----KQRLIRD 413
+I C N+ +PA N EEL + ++ LK+++ +LR Q L D
Sbjct: 281 PIISCANRTFMPATTSNKKVFFEELGMLEEKDQAHFATPLKFSLDVLRGNLDSNQSLFAD 340
Query: 414 RPKSCQQAIVLLTDSMYD-NYTDLVRHLDPGNNIRLFVFWLHDRYGLRDDTRRLAEWLSC 472
+ +++ TD + + + L N+ + +F YG L ++++C
Sbjct: 341 YRSEGHKLLIIFTDGVDEWPHQILDEEFQTRNSELIRIFGFSMGYG--TSLLPLQQYMAC 398
Query: 473 ARDGYFAELITHADVTEQVMSVLRVL 498
G ++E+ + DV Q ++ VL
Sbjct: 399 KSHGGYSEIDSIMDVKPQSRTIQNVL 424
>Z49907-12|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 107 bits (257), Expect = 5e-23
Identities = 97/386 (25%), Positives = 169/386 (43%), Gaps = 23/386 (5%)
Query: 129 ALVNKAADALE-DLLTRRVKAAENIMRKAEELDKDETPPPDNYV-FDHSVDLDKIKEKKI 186
+LV + + L+ D+ +++ AAE + E LD+ T D S + +
Sbjct: 46 SLVQEEFEKLKPDIKSKKEDAAEKLRVATEHLDRLVTNRVDALKKLASSAEASAAVFDEY 105
Query: 187 PNQKGWFMPQ---NCTNLQKVPLNESN-HFDGKVSLQTSS--VYVSLEVFECDPKVMKHI 240
+Q + +PQ C K +NES+ HF + S +++++E ++CDP+VM+
Sbjct: 106 DDQ-AYAVPQADKRCEAYMK-KMNESDMHFVSNMVEHNSKSGIHITVESYQCDPRVMRDF 163
Query: 241 YWT--EGLLSTFKKNYAQDATTDFQYFCSAKGFLRHYPAALWDDMHQLKLNTDDVYDCRL 298
WT + L T N + QY + G R YP W + + T D++D R
Sbjct: 164 DWTGTKHLEKTMSDNKEKAPEMGHQYIGTYSGLTRMYPRRHWK-VEPTPI-TIDLFDPRF 221
Query: 299 RSWYVSAGGAPRDVLVLLDASGSMNGSSNQVIAEEFXXXXXXXXXXXXQVNVLYFNEKVN 358
R W+V+A P+D++ LLD SGS+ G + +I V YFN N
Sbjct: 222 RPWFVNAESVPKDIVFLLDYSGSVKGPTMHLIKITMMYILSTLSPNDYFFGV-YFNNHFN 280
Query: 359 SLIQCFNQKMVPANHVNSAAMMEELREYTKVNETKVDYALKYAIKLLR-----KQRLIRD 413
+I C N+ +PA N EEL + ++ LK+++ +LR Q L D
Sbjct: 281 PIISCANRTFMPATTSNKKVFFEELGMLEEKDQAHFATPLKFSLDVLRGNLDSNQSLFAD 340
Query: 414 RPKSCQQAIVLLTDSMYD-NYTDLVRHLDPGNNIRLFVFWLHDRYGLRDDTRRLAEWLSC 472
+ +++ TD + + + L N+ + +F YG L ++++C
Sbjct: 341 YRSEGHKLLIIFTDGVDEWPHQILDEEFQTRNSELIRIFGFSMGYG--TSLLPLQQYMAC 398
Query: 473 ARDGYFAELITHADVTEQVMSVLRVL 498
G ++E+ + DV Q ++ VL
Sbjct: 399 KSHGGYSEIDSIMDVKPQSRTIQNVL 424
>Z49907-11|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 107 bits (257), Expect = 5e-23
Identities = 97/386 (25%), Positives = 169/386 (43%), Gaps = 23/386 (5%)
Query: 129 ALVNKAADALE-DLLTRRVKAAENIMRKAEELDKDETPPPDNYV-FDHSVDLDKIKEKKI 186
+LV + + L+ D+ +++ AAE + E LD+ T D S + +
Sbjct: 46 SLVQEEFEKLKPDIKSKKEDAAEKLRVATEHLDRLVTNRVDALKKLASSAEASAAVFDEY 105
Query: 187 PNQKGWFMPQ---NCTNLQKVPLNESN-HFDGKVSLQTSS--VYVSLEVFECDPKVMKHI 240
+Q + +PQ C K +NES+ HF + S +++++E ++CDP+VM+
Sbjct: 106 DDQ-AYAVPQADKRCEAYMK-KMNESDMHFVSNMVEHNSKSGIHITVESYQCDPRVMRDF 163
Query: 241 YWT--EGLLSTFKKNYAQDATTDFQYFCSAKGFLRHYPAALWDDMHQLKLNTDDVYDCRL 298
WT + L T N + QY + G R YP W + + T D++D R
Sbjct: 164 DWTGTKHLEKTMSDNKEKAPEMGHQYIGTYSGLTRMYPRRHWK-VEPTPI-TIDLFDPRF 221
Query: 299 RSWYVSAGGAPRDVLVLLDASGSMNGSSNQVIAEEFXXXXXXXXXXXXQVNVLYFNEKVN 358
R W+V+A P+D++ LLD SGS+ G + +I V YFN N
Sbjct: 222 RPWFVNAESVPKDIVFLLDYSGSVKGPTMHLIKITMMYILSTLSPNDYFFGV-YFNNHFN 280
Query: 359 SLIQCFNQKMVPANHVNSAAMMEELREYTKVNETKVDYALKYAIKLLR-----KQRLIRD 413
+I C N+ +PA N EEL + ++ LK+++ +LR Q L D
Sbjct: 281 PIISCANRTFMPATTSNKKVFFEELGMLEEKDQAHFATPLKFSLDVLRGNLDSNQSLFAD 340
Query: 414 RPKSCQQAIVLLTDSMYD-NYTDLVRHLDPGNNIRLFVFWLHDRYGLRDDTRRLAEWLSC 472
+ +++ TD + + + L N+ + +F YG L ++++C
Sbjct: 341 YRSEGHKLLIIFTDGVDEWPHQILDEEFQTRNSELIRIFGFSMGYG--TSLLPLQQYMAC 398
Query: 473 ARDGYFAELITHADVTEQVMSVLRVL 498
G ++E+ + DV Q ++ VL
Sbjct: 399 KSHGGYSEIDSIMDVKPQSRTIQNVL 424
>L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated
protein 36 protein.
Length = 1249
Score = 81.8 bits (193), Expect = 3e-15
Identities = 79/329 (24%), Positives = 148/329 (44%), Gaps = 17/329 (5%)
Query: 87 KSIENWAQRLSEVFFEIESKLVKREELLSAFSDAMMVAR--NGTALVNKAADALEDLLTR 144
+SI+ A+ LSE E SK + E +L + ++ + A + K+ +ED L
Sbjct: 23 ESIKECAKVLSEHMKETFSK-ISHETILKQNYEKLVEEEQFDPRAELKKSKHRIEDYLKV 81
Query: 145 RVKAA--ENIMRKAEELDKDETP-PPDNYVFDHSVDLDKIKEKKI---PNQKGWFMPQNC 198
R + A I +A + D T P + F + + + N G + N
Sbjct: 82 RSQFAYKAKISLEARSVRNDSTVNDPQSKSFIRFMSAKQGNDGTTIYESNHLGKRLKVNE 141
Query: 199 TNLQKVPLNESNHFDGKVSLQTSSVYVSLEVFECDPKVMKHIYWTEGLLSTFKKNYAQDA 258
T + N +N + S +S+V++ +++ + +++ I W++ + + ++ N +
Sbjct: 142 TKSFNLTQN-ANFYTLPTSSVSSAVHIPTPLYDRNEDLLRKIDWSD-IDAVYRTNREETK 199
Query: 259 TTDFQYFCSAKGFLRHYPAALWD-DMHQLKLNTDDVYDCRLRSWYVSAGGAPRDVLVLLD 317
FQ FCS G++R+YPAA W D L D++DCR WY+++ ++VL++LD
Sbjct: 200 DLAFQLFCSEAGYMRYYPAASWFWDNQDEHL---DLFDCRNTEWYINSATNSKNVLIMLD 256
Query: 318 ASGSMNGSSNQVIAEEFXXXXXXXXXXXXQVNVLYFNEKVNSLIQCFNQK-MVPANHVNS 376
SGSM G +V A++ N++ F++ L C ++ A N
Sbjct: 257 MSGSMLGQRYEV-AKQTTEAILETLSHNDYFNIMTFSKNTFLLDGCNGTNGLLQATMRNK 315
Query: 377 AAMMEELREYTKVNETKVDYALKYAIKLL 405
A+ ++ Y + + + AL A +L
Sbjct: 316 KALRRKMDTYQSEGKAEYEKALPLAFSVL 344
Score = 36.3 bits (80), Expect = 0.13
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 417 SCQQAIVLLTDSMYDNYTDLVRHLDPGNNIRLFVFWLHDRYGLRDDTRRLAEWLSCARDG 476
+C+ I+L+TD + Y + + +R+F F + D ++ R +A C G
Sbjct: 402 ACENVIMLITDGAPNAYKKIFDMYNADKKVRVFTFLVGDEAIDFNEVREMA----CNNRG 457
Query: 477 YFAELITHADVTEQVMSVLRVLVR 500
Y + ADV E++ +R + R
Sbjct: 458 YMVHVANMADVDEKIHHYIRRMSR 481
Score = 36.3 bits (80), Expect = 0.13
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 583 RLEISVSVPVFDATTAEYPV---NRLLGVAGVDIPIDHLKLILPYHQLGAGGSIILVDHR 639
RL+ S + TT YPV +GVA V+IP+ + +G+ ++D
Sbjct: 536 RLQKSEARSRMFVTTVSYPVIVNETFMGVAAVNIPLTEVAQKSHPANIGSKSYFFMLDQN 595
Query: 640 GNVVLHDNLKPTFD-GDVLRPGYRTVDFLDLE 670
G V+ H L+P + Y +D L+LE
Sbjct: 596 GFVMTHPQLRPIDPFTKYHKQNYNNMDLLELE 627
>Z81579-6|CAB04654.3| 1305|Caenorhabditis elegans Hypothetical
protein R13H4.1 protein.
Length = 1305
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 578 EELNYRLEISVSVPVFDATTAEYPVNRLLGVAGV-DIPIDHLKLI 621
E+LN +E + +PV D A+ PV L + V IP D LK I
Sbjct: 496 EDLNRFIEEPMEIPVQDVVVAKKPVEEPLPITSVYKIPFDELKPI 540
>AY959881-1|AAX56914.1| 1305|Caenorhabditis elegans
nephrocystin-4-like protein protein.
Length = 1305
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 578 EELNYRLEISVSVPVFDATTAEYPVNRLLGVAGV-DIPIDHLKLI 621
E+LN +E + +PV D A+ PV L + V IP D LK I
Sbjct: 496 EDLNRFIEEPMEIPVQDVVVAKKPVEEPLPITSVYKIPFDELKPI 540
>AF003140-3|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
protein C44E4.1a protein.
Length = 2712
Score = 31.5 bits (68), Expect = 3.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 566 WKLNEYGQYYEGEELNYRLEISVSVPV 592
W E G +Y EELN RL S S+P+
Sbjct: 302 WNCREIGMFYTHEELNNRLSSSDSLPI 328
>AF003140-2|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
protein C44E4.1c protein.
Length = 2710
Score = 31.5 bits (68), Expect = 3.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 566 WKLNEYGQYYEGEELNYRLEISVSVPV 592
W E G +Y EELN RL S S+P+
Sbjct: 302 WNCREIGMFYTHEELNNRLSSSDSLPI 328
>Z32683-6|CAA83623.1| 728|Caenorhabditis elegans Hypothetical
protein R07E5.8 protein.
Length = 728
Score = 31.1 bits (67), Expect = 4.9
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 361 IQCFNQKMVPANHVNSAAMMEELREYTKVNETKVDYALKYAIKLLRKQRLIRDRPKSCQQ 420
+QC N+K PA+ + + +EL++ T++ + + A+ +L+ Q I P
Sbjct: 80 VQCQNEKFTPASFDHLKFITKELQQNTEMIDPNFFKGVLGAVAVLKDQ--IESYPNPSGI 137
Query: 421 AIVLLTDSMYDN 432
+++LT+ + +N
Sbjct: 138 TLIVLTNGLNEN 149
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/53 (24%), Positives = 30/53 (56%)
Query: 1053 KLQSSISLGSVGAGVAAETVKEKMKRSNRLRKNYEADQFESLYDDRVLVNRTR 1105
++ ++S +VG V ETV+E + + + +++E +Q +S+ +R + R
Sbjct: 299 RIGENLSTSNVGNNVVRETVREYCEETGEILEDFEVNQNDSVLTERNVTGSVR 351
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans Hypothetical
protein F44E2.2a protein.
Length = 2175
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/53 (24%), Positives = 30/53 (56%)
Query: 1053 KLQSSISLGSVGAGVAAETVKEKMKRSNRLRKNYEADQFESLYDDRVLVNRTR 1105
++ ++S +VG V ETV+E + + + +++E +Q +S+ +R + R
Sbjct: 202 RIGENLSTSNVGNNVVRETVREYCEETGEILEDFEVNQNDSVLTERNVTGSVR 254
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans Hypothetical
protein F44E2.2b protein.
Length = 2186
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/53 (24%), Positives = 30/53 (56%)
Query: 1053 KLQSSISLGSVGAGVAAETVKEKMKRSNRLRKNYEADQFESLYDDRVLVNRTR 1105
++ ++S +VG V ETV+E + + + +++E +Q +S+ +R + R
Sbjct: 213 RIGENLSTSNVGNNVVRETVREYCEETGEILEDFEVNQNDSVLTERNVTGSVR 265
>Z92825-8|CAB07316.2| 469|Caenorhabditis elegans Hypothetical
protein C13C4.2 protein.
Length = 469
Score = 30.3 bits (65), Expect = 8.5
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 9/122 (7%)
Query: 125 RNGTALVNKAADALEDLLTRRVKAAENIMRKAEELDKDETPPPDNYVFDHSVDLDK---I 181
R +V+ EDLL+R ++ + K E L + PP + LD +
Sbjct: 177 RESLGVVSSLIVTEEDLLSRMIEKLTFVESKVEPLHRSGMPPGYRDIRKLEEILDSKPVL 236
Query: 182 KEKKIPNQKGWFMPQNCTNLQKVPLNESN--HFDGKVSLQTSSVYVSLEVFECDPKV--M 237
IPN K F P C N ++ + +N H SL++S ++ + + ++ M
Sbjct: 237 VVTDIPNLK--FCPSPCANEKRPRRHFTNYVHTSYLASLESSKMFEFSSQLDLESRILLM 294
Query: 238 KH 239
KH
Sbjct: 295 KH 296
>Z75955-17|CAB00126.2| 469|Caenorhabditis elegans Hypothetical
protein C13C4.2 protein.
Length = 469
Score = 30.3 bits (65), Expect = 8.5
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 9/122 (7%)
Query: 125 RNGTALVNKAADALEDLLTRRVKAAENIMRKAEELDKDETPPPDNYVFDHSVDLDK---I 181
R +V+ EDLL+R ++ + K E L + PP + LD +
Sbjct: 177 RESLGVVSSLIVTEEDLLSRMIEKLTFVESKVEPLHRSGMPPGYRDIRKLEEILDSKPVL 236
Query: 182 KEKKIPNQKGWFMPQNCTNLQKVPLNESN--HFDGKVSLQTSSVYVSLEVFECDPKV--M 237
IPN K F P C N ++ + +N H SL++S ++ + + ++ M
Sbjct: 237 VVTDIPNLK--FCPSPCANEKRPRRHFTNYVHTSYLASLESSKMFEFSSQLDLESRILLM 294
Query: 238 KH 239
KH
Sbjct: 295 KH 296
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,088,486
Number of Sequences: 27539
Number of extensions: 1104088
Number of successful extensions: 2589
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2550
Number of HSP's gapped (non-prelim): 30
length of query: 1174
length of database: 12,573,161
effective HSP length: 89
effective length of query: 1085
effective length of database: 10,122,190
effective search space: 10982576150
effective search space used: 10982576150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
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