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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001492-TA|BGIBMGA001492-PA|IPR001965|Zinc finger,
PHD-type, IPR011011|Zinc finger, FYVE/PHD-type,
IPR012294|Transcription factor TFIID, C-terminal/DNA glycosylase,
N-terminal
         (209 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,513...    39   0.003
02_01_0173 + 1190846-1191134,1191235-1191557,1191645-1191958,119...    39   0.003
09_02_0034 + 3151850-3152341                                           38   0.006
01_05_0282 - 20347915-20348874,20348968-20349012,20349568-203498...    38   0.008
07_03_1780 - 29465873-29466130,29466236-29466335,29466473-294665...    37   0.010
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293...    37   0.010
05_01_0459 - 3637741-3637995,3638078-3638204,3641273-3641495,364...    37   0.014
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502...    36   0.024
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701...    35   0.042
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223...    35   0.055
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522...    34   0.073
11_03_0135 - 10547460-10547558,10547926-10548086,10548183-105483...    34   0.096
07_03_1229 + 25023537-25024094                                         34   0.096
06_01_0609 + 4404287-4405023,4405496-4405631,4405724-4405876,440...    33   0.17 
08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-26...    33   0.22 
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389...    33   0.22 
12_02_0966 - 24906361-24906958,24907084-24907250,24907403-249076...    32   0.39 
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753...    31   0.51 
06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-13...    31   0.51 
04_01_0006 - 112476-114182,114627-114676,115289-115463                 31   0.68 
01_06_1574 + 38337669-38338196                                         31   0.68 
04_04_0316 - 24338774-24339367                                         31   0.90 
09_04_0588 - 18789971-18790000,18790334-18790507,18791470-187919...    30   1.2  
06_01_1111 - 9148237-9148758                                           30   1.2  
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673...    30   1.2  
02_05_1086 + 33994295-33994402,33994485-33994674,33994734-339947...    30   1.2  
01_07_0292 + 42560302-42560668,42560818-42560910,42563746-425639...    30   1.2  
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583...    29   2.1  
09_06_0244 + 21822811-21823246,21823337-21823468,21823949-218240...    29   2.7  
06_02_0086 - 11567390-11567634,11568316-11568341,11571082-115712...    29   2.7  
01_06_0709 - 31367152-31367532,31367762-31368035,31368474-31370557     29   2.7  
07_03_1730 - 29099262-29099807                                         29   3.6  
07_03_1242 + 25113464-25114150                                         29   3.6  
02_05_0605 + 30300977-30301912                                         29   3.6  
02_05_0546 + 29889861-29890182,29891057-29892798                       29   3.6  
01_01_0449 + 3335408-3335479,3336310-3336389,3336911-3336989,333...    29   3.6  
09_02_0035 + 3182151-3182618                                           28   4.8  
09_01_0127 + 1928816-1929137,1929221-1929747                           28   4.8  
07_03_1230 + 25044126-25044683                                         28   4.8  
05_04_0172 + 18718661-18718930,18719410-18720252,18720326-187203...    28   4.8  
03_06_0322 + 33114988-33115130,33116972-33117024,33117432-331177...    28   4.8  
08_02_1381 - 26551920-26552053,26552963-26553070,26553154-265533...    28   6.3  
10_08_0303 - 16638379-16640199                                         27   8.4  
07_01_0623 + 4638952-4639024,4640422-4640439,4641312-4641660,464...    27   8.4  

>02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,
            5139967-5140289,5141373-5142479,5142593-5143279,
            5144214-5144522,5145488-5145823,5146165-5146263,
            5146676-5146940,5146950-5147104,5147666-5149723,
            5150168-5150367,5150662-5150718,5150965-5151079
          Length = 1985

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 15/48 (31%), Positives = 18/48 (37%)

Query: 4    CGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAK 51
            C  CG          C KC   +H  C+  P   +    W CPSC  K
Sbjct: 1081 CKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSCQTK 1128


>02_01_0173 +
          1190846-1191134,1191235-1191557,1191645-1191958,
          1192302-1192461
          Length = 361

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 3  KCGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRG-WICPSCLAKVP 53
          +C ACG   S A+   C  C    H  C+  P     P G W CPSC +  P
Sbjct: 34 RCEACGSGESAAELLLCDGCDRGLHIFCLR-PILPRVPAGDWFCPSCASPSP 84


>09_02_0034 + 3151850-3152341
          Length = 163

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%)

Query: 4   CGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAKVPRGDNAA 59
           C  C + ++ AD      C+  +H GC++ P  G+      CP C A++P  D+AA
Sbjct: 70  CSVCTEEIAVADAVVRLPCAHWYHAGCIS-PWLGIRS---TCPMCRAELPASDDAA 121


>01_05_0282 -
           20347915-20348874,20348968-20349012,20349568-20349816,
           20350393-20350581,20351051-20351155,20351165-20351488,
           20351493-20351555
          Length = 644

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 13/45 (28%), Positives = 17/45 (37%)

Query: 4   CGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSC 48
           C  CGK         C +C   FH  C+  P    +   W C +C
Sbjct: 371 CNECGKVAKIDSILTCKRCMLAFHVSCIEPPVPSTSTGSWCCKTC 415



 Score = 28.7 bits (61), Expect = 3.6
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 19  CSKCSDNFHKGCVAIPSTGVAPRGWICPSC 48
           C  C + +H  C+    T +    W C SC
Sbjct: 562 CDGCDEAYHLYCITPRRTSIPKGKWYCSSC 591


>07_03_1780 -
           29465873-29466130,29466236-29466335,29466473-29466559,
           29466682-29467000,29467097-29468567
          Length = 744

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 10/50 (20%)

Query: 4   CGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRG-WICPSCLAKV 52
           C  CG+ L       C +C   FH  CV + ST   P+G W CP+C   +
Sbjct: 417 CHDCGELLM------CDRCPSMFHHACVGLEST---PQGDWFCPACTCAI 457


>04_04_1104 -
           30928475-30928501,30929008-30929110,30929287-30929340,
           30929803-30929895,30930063-30930140,30930416-30930527,
           30930618-30930756,30930823-30930910,30930984-30931079,
           30931675-30931781,30931874-30932009,30932089-30932186,
           30932954-30933047,30933132-30933301,30933749-30933819,
           30936066-30936194,30936552-30936654,30936764-30936907,
           30937123-30937245,30937482-30937563,30939044-30939120,
           30939261-30939315,30939365-30939443,30939544-30939620,
           30939739-30939869,30939947-30940120,30940245-30940310,
           30940937-30941572
          Length = 1113

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 16/45 (35%), Positives = 19/45 (42%)

Query: 4   CGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSC 48
           C  C           CS CS + H GC+  P TGV    W C +C
Sbjct: 642 CQICNTEEEKTLLLHCSGCSRHVHPGCLTPPWTGVLTDDWSCYTC 686


>05_01_0459 -
           3637741-3637995,3638078-3638204,3641273-3641495,
           3641592-3641624,3641716-3641854
          Length = 258

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 4   CGACGKFLSTADC-ARCSKCSDNFHKGCVAI-PSTGVAPRGWICPSCLAKVPR 54
           CG CG   S  +    C  C   +H  CV I P+   + + + CPSC +K PR
Sbjct: 205 CGTCGGIYSADEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSKRPR 257


>07_03_1575 - 27848977-27849095,27849254-27849302,27850270-27850287,
            27850798-27851786,27852119-27852733,27852893-27852921,
            27853990-27854453,27854530-27854654,27854743-27855025,
            27855112-27856102,27856965-27857576,27857666-27858630
          Length = 1752

 Score = 35.9 bits (79), Expect = 0.024
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 4    CGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAK 51
            CG C K +  +D   C  C   FHK    +P  G     ++C  CL++
Sbjct: 1137 CGHCDKEVKISDAVNCQYCEALFHKKHFKVP-RGATDAYYVCNKCLSE 1183



 Score = 31.9 bits (69), Expect = 0.39
 Identities = 11/31 (35%), Positives = 13/31 (41%)

Query: 19  CSKCSDNFHKGCVAIPSTGVAPRGWICPSCL 49
           C  C   FH  CV +    +    W CP CL
Sbjct: 458 CDGCPAAFHSKCVGVVEDLLPEGNWFCPECL 488


>06_03_1511 -
           30669292-30669401,30669894-30669930,30670012-30670107,
           30670186-30670281,30670679-30670828,30670956-30671100,
           30671178-30671251,30671325-30671445,30671697-30671821,
           30671898-30672047,30672249-30672324,30672496-30672557,
           30672597-30672839,30673354-30673683,30673776-30673932,
           30674008-30674139,30674219-30674277,30674734-30674798,
           30674878-30675094,30675413-30675499,30675655-30675750,
           30675938-30676003,30676096-30676287,30676380-30676532,
           30676812-30677052,30677322-30677515,30678212-30678348,
           30678474-30678480,30678708-30678830,30679370-30679427,
           30680018-30680090,30680493-30681765
          Length = 1714

 Score = 35.1 bits (77), Expect = 0.042
 Identities = 13/46 (28%), Positives = 18/46 (39%)

Query: 4   CGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCL 49
           C  C   L       C +C   +H  C++ P   V P  W C  C+
Sbjct: 259 CEQCNSGLHGEVMLLCDRCDKGWHLYCLSPPLESVPPGNWYCSECM 304



 Score = 34.3 bits (75), Expect = 0.073
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 4    CGACGKFLSTADCARCSKCSDNFHKGCV-AIPSTGVAPRGWICPSC 48
            C  C   +      RC  C   +H  CV  +P++    R W CP C
Sbjct: 1418 CAICSCDVGDHITPRCMICQARYHSSCVEPLPASTQVTREWTCPFC 1463


>11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,
            2233053-2233513,2233593-2233717,2233801-2234098,
            2235004-2236234,2236562-2237233,2237329-2238539
          Length = 1884

 Score = 34.7 bits (76), Expect = 0.055
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 4    CGACGKFLSTADCARCSKCSDNFHKGCV--AIPS-TGVAPRGWICPSCLAK 51
            C +C K +S  D  +CS C  N HK C   ++ S  G A     C  CL K
Sbjct: 1323 CTSCKKDVSFRDIIKCSSCQGNCHKECTLRSVGSKEGNAASSLTCKLCLQK 1373



 Score = 27.9 bits (59), Expect = 6.3
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 5/47 (10%)

Query: 4   CGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRG-WICPSCL 49
           C  CG    T  C  C  C   +H  C+   +    P+G W CP C+
Sbjct: 547 CRICGMD-GTLVC--CDGCPWAYHSRCIG-QNKAFLPQGDWFCPECV 589


>04_03_0205 +
          12649724-12650191,12651493-12652025,12652114-12652239,
          12652625-12652724,12652880-12652899,12653035-12653137,
          12653213-12653351,12653448-12653662,12653772-12654320
          Length = 750

 Score = 34.3 bits (75), Expect = 0.073
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 4  CGACGKFLSTADCARCSKCSDNFHKGCVAI--PSTGVAPRGWICPSCLAKV 52
          C  C    +  +  RCS C+  +H  C++   P T VA   W+CP C   V
Sbjct: 18 CMLCKVLTTEVEQLRCSTCATPWHTPCLSSIPPLTDVA--HWVCPDCSGDV 66


>11_03_0135 -
           10547460-10547558,10547926-10548086,10548183-10548306,
           10548566-10548729,10549803-10549883,10549973-10550097,
           10550200-10550430,10550566-10550588,10551055-10551539,
           10551678-10552075,10552903-10552988,10553120-10553397,
           10553494-10553714,10553927-10554018,10554148-10554213,
           10555855-10556022
          Length = 933

 Score = 33.9 bits (74), Expect = 0.096
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 4   CGACGKFLSTADCARCSKCSDNF-HKGCVAIPSTGVAPRGWICPSCLAKV 52
           C  CG   +    A CS+C+D   H  C+ +    V    W+C +C ++V
Sbjct: 279 CDICGDIGAEEKLAVCSRCNDGAEHIYCMRVMMQEVPKAKWLCETCHSEV 328



 Score = 30.7 bits (66), Expect = 0.90
 Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 4   CGACGKFLSTADCARCSKCSDNF-HKGCVAIPSTGVAPRGWICPSC 48
           C  CG        A CS+C+D   H  C+ +    V    W C  C
Sbjct: 84  CDICGDVGEEKKLAICSRCNDGAEHIYCMRVMMPEVPEGDWFCEEC 129


>07_03_1229 + 25023537-25024094
          Length = 185

 Score = 33.9 bits (74), Expect = 0.096
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 4  CGACGKFLSTADCARCSKCSDNFHKGCVAIP 34
          C AC + + T D  RC KC  N H  C+A+P
Sbjct: 29 CTACERRI-TGDGYRCRKCDFNIHHACLALP 58


>06_01_0609 +
           4404287-4405023,4405496-4405631,4405724-4405876,
           4405985-4406128,4406224-4406375,4406453-4406552,
           4406653-4406775,4406876-4407037,4407190-4407247,
           4407324-4407502,4408294-4408402,4408567-4408637,
           4408891-4408986,4409727-4409803,4410983-4411066,
           4411473-4411607,4411744-4411819,4413072-4413167,
           4413580-4413671,4413745-4413868,4413966-4414052
          Length = 996

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 3   KCGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAK 51
           +C  C +    A    C  C   FH  CV  P   V    W CP C A+
Sbjct: 162 ECRVCFR-AGAAVMVECDVCLGGFHLRCVRPPLRRVPEGDWACPYCEAE 209


>08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-269805,
            269895-270098,271532-271664,271810-271881,273106-273168,
            273252-275034,275169-275217
          Length = 1229

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 1    MAKCGACGKFLSTADCARCSKCSDNFHKGCVAI--PSTGVAPRGWICPSCLAK 51
            +  C  CG  +   +   C +C   +H  CV +  P     P  W C +C  K
Sbjct: 962  LCPCDGCGTKVDVEEGLICDECDTMYHFACVKLLNPDIKQVPAIWHCSTCSFK 1014



 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 2/46 (4%)

Query: 4    CGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRG-WICPSC 48
            C  C +         C  C + +H  C+  P+    P+G W C  C
Sbjct: 1143 CRGCFQDKDDDQIVMCDGCDEGYHIYCMR-PARNTIPKGKWYCTFC 1187


>07_01_0524 +
           3892340-3894625,3894995-3895109,3895204-3895298,
           3895929-3896167,3896524-3896610,3896967-3897066,
           3897908-3898115,3898224-3899422
          Length = 1442

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 8/49 (16%)

Query: 4   CGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRG-WICPSCLAK 51
           CG CG      D   C  C   FH  C+ I      P G W C SC+ +
Sbjct: 735 CGICG---DGGDLLCCDNCPSTFHLACLGIK----MPSGDWHCSSCICR 776


>12_02_0966 -
           24906361-24906958,24907084-24907250,24907403-24907650,
           24907824-24908001,24908196-24908372,24908459-24908563,
           24908633-24908770,24909757-24910836
          Length = 896

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 3   KCGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAK 51
           +CG  G F +  D   C  C   +  GC+ + + G  P G  C  C+ +
Sbjct: 226 RCGKGGSFWARGDKEACLACGARYCGGCL-LRAMGSMPEGRKCLDCIGR 273


>07_03_0481 -
          18572206-18574314,18574591-18575185,18575304-18575371,
          18577344-18577458,18578179-18578333,18578673-18580621,
          18580691-18581372,18581550-18581621,18582558-18583199,
          18583301-18583402,18585011-18585100
          Length = 2192

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 19 CSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAK 51
          C  C   +H  C+  P     P  W CP C  K
Sbjct: 47 CDSCPRTYHLECLNPPLKRAPPGNWQCPRCRTK 79


>06_01_0007 +
           130582-131544,132187-132264,132615-132732,133228-133271,
           133389-133448,133536-133588,133671-133837,133963-134167,
           134989-135046,135225-135281,135363-135608,135938-136002,
           136090-136158,136238-136331,136467-136607,137159-137304,
           137452-138110,138222-138335,138406-138560
          Length = 1163

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 6/45 (13%)

Query: 4   CGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSC 48
           C  CG+     D   C  C  +FH  CV +  +GV P  W C +C
Sbjct: 473 CRECGQ---GGDIFPCKMCPRSFHPACVGL--SGV-PSEWYCDNC 511


>04_01_0006 - 112476-114182,114627-114676,115289-115463
          Length = 643

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 2   AKCGACGKFLSTADCAR-CSKCSDNFHKGCVAIPSTGVAPRGWI-CPSCLA 50
           ++CG C   + T   A   ++CS +FH  C+A  +  +A    + CP C A
Sbjct: 76  SRCGVCSHGVKTGAAAVFTAECSHSFHFPCIAAHAHALAAATALSCPVCAA 126


>01_06_1574 + 38337669-38338196
          Length = 175

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 13/48 (27%), Positives = 18/48 (37%)

Query: 4   CGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAK 51
           C  C           C  C + +H  C+  P T V    W C SC+ +
Sbjct: 74  CRVCKVDRDDEQIILCDGCDEGYHLYCLIPPLTLVPEGEWHCSSCIVQ 121


>04_04_0316 - 24338774-24339367
          Length = 197

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 14/51 (27%), Positives = 17/51 (33%)

Query: 1  MAKCGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAK 51
          +  C  C   +   D  R   C   FHK C       +   G  CP C  K
Sbjct: 44 LGDCSMCRYGMVAGDVVRTLSCGHVFHKDCDYSVDKWLREHGLSCPECRKK 94


>09_04_0588 -
           18789971-18790000,18790334-18790507,18791470-18791954,
           18792912-18793266
          Length = 347

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 3   KCGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAKVPRGDNAATP 61
           KC  CGK +      RC+ CS   H  C A+      P     P  LA  P     ATP
Sbjct: 125 KCDICGKSVKGFSF-RCTSCSFAMHPCCAAMSRRMDLPVAHEHPLMLAPSPPTPPMATP 182


>06_01_1111 - 9148237-9148758
          Length = 173

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 5/50 (10%)

Query: 4   CGACGKFLSTAD-CARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAKV 52
           C  C + L   D C R  +C  +FH  CV    + +    W CP C A V
Sbjct: 90  CAVCLEELEAGDRCRRLPRCEHSFHAPCV---DSWLRKSRW-CPVCRADV 135


>06_01_0878 +
           6735266-6735340,6735946-6736041,6738610-6738720,
           6738816-6739309,6739422-6739587,6739666-6739789,
           6739874-6739986,6740085-6740693,6743095-6743385,
           6743845-6743913,6744099-6744188,6744281-6744696,
           6744882-6744969
          Length = 913

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 7/56 (12%)

Query: 4   CGACGKFLSTA--DCARCSK-CSDNFHKGCVAIPSTGV----APRGWICPSCLAKV 52
           C ACG    T   D   C   C   FH+ C+  P           GW+CP+C  K+
Sbjct: 317 CAACGSKDVTLKNDIILCDGICDRGFHQYCLNPPLLAEDIPQGDEGWLCPACDCKI 372


>02_05_1086 +
           33994295-33994402,33994485-33994674,33994734-33994789,
           33995413-33995550,33995655-33995848,33996125-33996467
          Length = 342

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 3   KCGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAKV 52
           +C  C + L   +      C+  FH GC A+P    A R   CP C A V
Sbjct: 283 ECAVCLEELRAGEAVAHLPCTHRFHWGC-AVPWVQTASR---CPVCRAAV 328


>01_07_0292 +
           42560302-42560668,42560818-42560910,42563746-42563969,
           42564047-42564147,42564229-42564441,42564843-42565002
          Length = 385

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 2/47 (4%)

Query: 3   KCGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRG-WICPSC 48
           +C  CG      +   C  C    H  C+  P     P G W CP C
Sbjct: 69  RCDVCGSGERDEELLLCDGCDRGRHTFCLR-PIAARVPTGPWFCPPC 114


>12_02_0133 -
           14057469-14057497,14057516-14057581,14057770-14058363,
           14058450-14058570,14058926-14059320,14059410-14059534,
           14059646-14059876,14060012-14060484,14060587-14060693,
           14060842-14061172,14061222-14061250,14061345-14061901,
           14062170-14062255,14062344-14062406,14062646-14063001,
           14063101-14063356
          Length = 1272

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 4   CGACGKFLSTADCARCSKCSDNF-HKGCVAIPSTGVAPRGWICPSC 48
           C  CG        A C++C+D   H  C+ +    V    W+C  C
Sbjct: 229 CDICGDVGEEERLAVCTRCNDGAEHIYCMRVMMEEVPEGEWLCEEC 274


>09_06_0244 + 21822811-21823246,21823337-21823468,21823949-21824037,
            21824135-21824224,21825033-21825603,21826097-21826734,
            21826978-21827098,21827223-21827337,21828234-21829723,
            21829830-21829901,21830151-21830196,21830413-21830515,
            21830591-21830674,21831035-21831475,21831651-21831746,
            21831896-21832045,21832131-21832274,21832414-21832527,
            21832621-21832803,21832901-21832945,21833058-21833192
          Length = 1764

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 6/50 (12%)

Query: 2    AKCGACG--KFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRG-WICPSC 48
            A C  CG      +     CSKC    H+ C  +      PRG W C  C
Sbjct: 1276 ASCCVCGISNLEPSNQLIECSKCFIKVHQACYGVLK---VPRGQWFCKPC 1322


>06_02_0086 -
           11567390-11567634,11568316-11568341,11571082-11571224,
           11571569-11571682,11571855-11572888,11574723-11575047,
           11576843-11577124
          Length = 722

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 3/51 (5%)

Query: 4   CGACGKFL-STADCARCSKCSDNFHKGCVAIPSTGVAP--RGWICPSCLAK 51
           C  C  F+        C  C    H  C+      V P    W CP+C+A+
Sbjct: 304 CQVCKVFIIDIHSMIICDACERGIHLKCLQHDGVNVLPPKAEWYCPTCVAR 354


>01_06_0709 - 31367152-31367532,31367762-31368035,31368474-31370557
          Length = 912

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 137 DVPGTVRTVYLNERLSAYNRQLFGTARQKGKDKGWKYVWTKDGRIYIRRGDGTP 190
           DVP +V      +R+   + QL   AR++   +GW + W  D  + ++  DG P
Sbjct: 69  DVPSSVA----GDRVIVVSNQLPVVARRRPDGRGWSFSWDDDS-LLLQLRDGIP 117


>07_03_1730 - 29099262-29099807
          Length = 181

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 3   KCGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAKVPRGDNAA 59
           +C  C   +   D  R  +C   FH+GC+        P    CP C  ++ +  +AA
Sbjct: 96  QCAVCLSGIEEGDEVRELRCRHLFHRGCLDRWWLSARPPA-TCPLCRCRLLQSPSAA 151


>07_03_1242 + 25113464-25114150
          Length = 228

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 4/44 (9%)

Query: 3   KCGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAP---RGW 43
           +C AC +  S     RC  C    H GCV+    G AP   RGW
Sbjct: 143 ECAACHRDCSIWHY-RCGLCLFMLHIGCVSPAGAGGAPAGARGW 185


>02_05_0605 + 30300977-30301912
          Length = 311

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 3   KCGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAKVPRGD 56
           +C  C   +   + AR   C+  +H GC+ +P   +      CP C  ++P  D
Sbjct: 230 QCAVCKDGMEAGERARRLPCAHLYHDGCI-LPWLAIRN---TCPLCRHELPTDD 279


>02_05_0546 + 29889861-29890182,29891057-29892798
          Length = 687

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 19  CSKCSDNFHKGCVA-IPSTGVAPRGWICPSCLAK 51
           C  C    H  C+    + GV    W CP+CL K
Sbjct: 225 CDACEKGAHLKCLQHYGNKGVPKAEWHCPTCLTK 258


>01_01_0449 +
           3335408-3335479,3336310-3336389,3336911-3336989,
           3337342-3337423,3337820-3337976,3338660-3338717,
           3338718-3338828,3339211-3339257,3339820-3339948,
           3340750-3340834,3341264-3341344,3341881-3341886
          Length = 328

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 99  EGDENRPRILSVRLARRSVRDALLKGARVRRYLSTTDLDVPGTVRTVYLNERLSAYNRQ- 157
           E D    R + + L++ ++RDA L    ++  L + DL++P T    ++   L    R  
Sbjct: 218 EDDTAIARGVLMYLSQGNLRDANLLMDELKDQLKSADLEIPKTDLIQFIKYLLPTLERDA 277

Query: 158 --LFGTARQKGK 167
             LF T RQK K
Sbjct: 278 YPLFRTLRQKYK 289


>09_02_0035 + 3182151-3182618
          Length = 155

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 4   CGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAKVPRGDNAA 59
           C  C + ++         C+  +H GC+  P   +      CP+C A++PR   AA
Sbjct: 71  CAVCTEEVAARQAVVRLPCAHWYHAGCIG-PWLRIRTN---CPTCRAELPREPAAA 122


>09_01_0127 + 1928816-1929137,1929221-1929747
          Length = 282

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 131 LSTTDLDVPGTVRTVYLNERLSAYNRQLFGTARQKGKDKGWKYVWTKDGR 180
           L  T+  +  T  T  L    SAY+ Q FGT R    +K +K +WT + +
Sbjct: 163 LVNTEDKIEWTQTTDGLYSARSAYHAQFFGTER----NKSFKMIWTAEAQ 208


>07_03_1230 + 25044126-25044683
          Length = 185

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 3/35 (8%)

Query: 4  CGACGKFLSTADCARCS--KCSDNFHKGCVAIPST 36
          C AC + + T D  RC   +C  + H+ C+A+P++
Sbjct: 31 CAACERVV-TGDGYRCEHGECDFHVHRSCLALPAS 64


>05_04_0172 +
           18718661-18718930,18719410-18720252,18720326-18720354,
           18720439-18720529,18720625-18720779,18721552-18721662,
           18722579-18722645
          Length = 521

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 3/55 (5%)

Query: 2   AKCGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAKVPRGD 56
           A+C  C    +  DC R   C+  FH  CV      +     +CP C   V R +
Sbjct: 462 AQCYICLVEYAEGDCVRILPCNHEFHLTCV---DKWLKEIHRVCPLCRGDVCRSN 513


>03_06_0322 +
           33114988-33115130,33116972-33117024,33117432-33117780,
           33118450-33118518,33119015-33119150,33120048-33120080
          Length = 260

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 18  RCSKCSDNFHKGCVAIP-STGVAPRGWICPSCLAK 51
           +C  CSD FH  CV I          + C SC+A+
Sbjct: 198 QCEDCSDWFHPSCVEITIKEAKKLEHFYCKSCIAE 232


>08_02_1381 -
           26551920-26552053,26552963-26553070,26553154-26553340,
           26554107-26554316
          Length = 212

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 13/69 (18%)

Query: 95  RHFTEGDENRPRILSVRLARRSVRDALLKGARVRRYLSTTDLDVPGTVRTVYLNERLSAY 154
           +H+ E   +R  IL+  ++RR+V  ALL+ A +          +  +V  VYL  RL  +
Sbjct: 156 QHWLEAQTDRQAILNENMSRRAVHKALLESAAL----------IAASVIQVYLLRRL--F 203

Query: 155 NRQLFGTAR 163
            R+L GT+R
Sbjct: 204 ERKL-GTSR 211


>10_08_0303 - 16638379-16640199
          Length = 606

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 4  CGACGKFLSTADCARCSKCSDNFHKGCVAIPSTGVAPRGWICPSCLAK 51
          C  C   ++       ++CS  FH  C+A     VA    +CP C A+
Sbjct: 8  CAICLGEIAGGQAIFTAECSHTFHNRCIA---RNVAHGRRVCPLCNAR 52


>07_01_0623 +
           4638952-4639024,4640422-4640439,4641312-4641660,
           4643917-4643985,4645587-4645722,4646835-4646870
          Length = 226

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 18  RCSKCSDNFHKGCVAIPSTGVAP-RGWICPSCLAK 51
           +C +CSD FH  C+ +          + C SC A+
Sbjct: 163 QCEECSDWFHPSCIGMTIKDAKKLEHFFCQSCTAE 197


  Database: rice
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.324    0.139    0.447 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,065,479
Number of Sequences: 37544
Number of extensions: 230143
Number of successful extensions: 797
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 763
Number of HSP's gapped (non-prelim): 60
length of query: 209
length of database: 14,793,348
effective HSP length: 79
effective length of query: 130
effective length of database: 11,827,372
effective search space: 1537558360
effective search space used: 1537558360
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 58 (27.5 bits)

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