Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001491-TA|BGIBMGA001491-PA|IPR002557|Chitin binding
Peritrophin-A
(222 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 42 5e-04
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 38 0.007
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 38 0.007
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 38 0.007
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 37 0.015
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 33 0.14
SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 31 0.58
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 31 0.58
SB_56964| Best HMM Match : Zona_pellucida (HMM E-Value=0) 30 1.3
SB_39562| Best HMM Match : DMAP1 (HMM E-Value=1.8) 29 2.3
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 29 4.1
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 28 5.4
SB_48824| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_58619| Best HMM Match : OKR_DC_1_C (HMM E-Value=5.9) 28 7.1
SB_49295| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 76.6 bits (180), Expect = 2e-14
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 18/216 (8%)
Query: 1 CDKFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNVDCG--NRITNQVHNRTXXXXXXXX 58
C+ F C+N C E L +NP + CD P NV CG T +V T
Sbjct: 457 CEGFISCSNHITYHMPCPENLRFNPTTKHCDNPENVQCGPTRPPTPKVPPTTKAPFTKSP 516
Query: 59 XXXXXXXXXXXXTCDWAPSDAPSLCALPANNGGLVPHENC--NQFYHPITQTCEWSKNVE 116
+DA + + G + + +C N Y P CEW+ V+
Sbjct: 517 FCVGKQNGKY--------ADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEWADTVD 568
Query: 117 CGTR--VVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLA 174
CG R + P T P P ++ C +E NG + C+ + C +G
Sbjct: 569 CGQRPTISPHPPKPTTMPPQPTPPKS-PFC-EEKKNGDYADPSNCNGFITCSNGYAYKRD 626
Query: 175 CPSNLFYDPQKERCDFPANVSCEARVAPVFLPPLNK 210
CP NL +D +K C++P V+C++R P +P + K
Sbjct: 627 CPFNLKFDTKKLECEWPNKVNCKSR--PTTVPYVTK 660
Score = 59.7 bits (138), Expect = 2e-09
Identities = 52/199 (26%), Positives = 67/199 (33%), Gaps = 11/199 (5%)
Query: 1 CDKFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNVDCGNRITNQVHNRTXXXXXXXXXX 60
C+ F C+N C L Y+P C+W VDCG R T H
Sbjct: 532 CNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEWADTVDCGQRPTISPHPPKPTTMPPQPTP 591
Query: 61 XXXXXXXXXXTCDWAPSDAPSLC-ALPANNGGLVPHENC--NQFYHPITQTCEWSKNVEC 117
D+A PS C + G +C N + CEW V C
Sbjct: 592 PKSPFCEEKKNGDYAD---PSNCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKVNC 648
Query: 118 GTRVVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPS 177
+R P T P P C + G+ HN C Y +C G C
Sbjct: 649 KSR--PTTVPYVTKPT--PPSGNSEFCKKNGNGRYRDPHN-CLGYIVCRGGNIYFRNCRR 703
Query: 178 NLFYDPQKERCDFPANVSC 196
L ++ +RCD P NV C
Sbjct: 704 GLRFNGVTKRCDLPRNVKC 722
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 144 CAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEARVAPV 203
CA E S+G + C + C + T + CP NL ++P + CD P NV C P
Sbjct: 443 CA-ERSDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKHCDNPENVQCGPTRPPT 501
Query: 204 -FLPPLNK 210
+PP K
Sbjct: 502 PKVPPTTK 509
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 135 CDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCD 189
C C E S+G C + MC +G T + CP +DP K+RC+
Sbjct: 369 CSGSSGSGFC-HEKSDGNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAKKRCE 422
Score = 31.9 bits (69), Expect = 0.44
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 147 EGSNGKLVAHNVCSHYHMCVSGKTLSLA-CPSNLFYDPQKERCDFPANV 194
E +G + C+ Y C +G T++ CP+ L ++ CD+P+NV
Sbjct: 318 ERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNV 366
Score = 31.1 bits (67), Expect = 0.76
Identities = 42/220 (19%), Positives = 79/220 (35%), Gaps = 28/220 (12%)
Query: 1 CDKFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNVDCGNRITNQVHNRTXXXXXXXXXX 60
C+ F C+N C L ++ C+WP+ V+C +R T +
Sbjct: 611 CNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKVNCKSRPTTVPY-------VTKPTP 663
Query: 61 XXXXXXXXXXTCDWAPSDAPSLCALPANNGGLVPHENCNQF--YHPITQTCEWSKNVECG 118
+ D + GG + NC + ++ +T+ C+ +NV+C
Sbjct: 664 PSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFNGVTKRCDLPRNVKCA 723
Query: 119 TRVVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSN 178
G C+ ++ +G V C+ + C + T CPSN
Sbjct: 724 GA---------GGGTFCEGRK----------DGDYVDAVNCNGFIKCSNQLTYYFDCPSN 764
Query: 179 LFYDPQKERCDFPANVSCEARVAPVFLPPLNKHWEARQNI 218
L ++ +K+ ++ R+A P N W+ +N+
Sbjct: 765 LRFNIKKDWAEYNKTGERGYRLAGGRGPRENPPWQLGENV 804
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 1 CDKFYKCANRKPVPFC-CSEGLFYNPVIEVCDWPHNV 36
C+ + C+N + C GL +N I +CD+P NV
Sbjct: 330 CNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNV 366
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 141 LSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCE 197
LS + ++G + C Y C +G + CP+ L ++ +K+ CD+P N CE
Sbjct: 82 LSTICKNRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPCE 138
Score = 34.3 bits (75), Expect = 0.082
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 1 CDKFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNVDC 38
C + C+N C GL +N + CDWP N C
Sbjct: 100 CKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPC 137
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 1 CDKFYKC-ANRKPVPFCCSEGLFYNPVIEVCDWPHNVDCGNR 41
C +FY+C A + CS GL ++ CDWP NVDC +
Sbjct: 797 CSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNVDCDRK 838
Score = 40.3 bits (90), Expect = 0.001
Identities = 45/199 (22%), Positives = 66/199 (33%), Gaps = 16/199 (8%)
Query: 1 CDKFYKC-ANRKPVPFCCSEGLFYNPVIEVCDWPHNVDCGNRITNQVHNRTXXXXXXXXX 59
C +FY+C A + C GL ++ CDWP VDC T
Sbjct: 1007 CSRFYQCDAFHRAFLHRCPAGLKWSVKKTTCDWPRYVDCDRTPTTSGTPTKPIPLCDLSC 1066
Query: 60 XXXXXXXXXXXTCDWAPSDAPSLCALPANNGGLVPHENCNQFYHPITQTCEWSKNVECGT 119
++ D + P + + P + F QT GT
Sbjct: 1067 LTLYPDGTYTIAPNYKIVDGTCVKISPTS---ITPTTKPSSFCKLHCQTLR-----PDGT 1118
Query: 120 RVVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMC-VSGKTLSLACPSN 178
V V G C + C ++ NG CS ++ C KT CP+
Sbjct: 1119 CTVISNYQVVNGMC-----VDTTFC-KDKPNGHYADPRDCSRFYQCDAFHKTFLHRCPAG 1172
Query: 179 LFYDPQKERCDFPANVSCE 197
L + +K CD+P V C+
Sbjct: 1173 LKWSVKKTACDWPRYVDCD 1191
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/113 (25%), Positives = 41/113 (36%), Gaps = 9/113 (7%)
Query: 1 CDKFYKC-ANRKPVPFCCSEGLFYNPVIEVCDWPHNVDCGNRITNQVHNRTXXXXXXXXX 59
C +FY C + + + C GL ++ V + CD+PH VDC T V T
Sbjct: 582 CAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYPHLVDCSRPTTPPV---TTTKSTTSST 638
Query: 60 XXXXXXXXXXXTCDWAPSDAPSLCALPANNGGLVPHENCN--QFYHPITQTCE 110
T P+ P C L L P C YH ++ C+
Sbjct: 639 TKGTTASTTTSTPTTTPTTRPP-CNLHCQT--LNPDGTCTVAPGYHIVSGMCQ 688
Score = 37.9 bits (84), Expect = 0.007
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 15/108 (13%)
Query: 104 PITQTCEWSKNVECGT-------RVVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAH 156
P+T T + + ++ C T V PG E VN G C + C ++ +G
Sbjct: 1302 PLTPTTKPACDLHCQTLNPDGSCTVAPGYEVVN-GMC-----VDTTFC-KDRPHGHYADP 1354
Query: 157 NVCSHYHMC-VSGKTLSLACPSNLFYDPQKERCDFPANVSCEARVAPV 203
CS ++ C S KT CP L + +K CD P V C+ + V
Sbjct: 1355 RDCSRFYQCDASHKTFLHRCPDGLKWSVKKTACDLPLYVDCDRTIPTV 1402
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 1 CDKFYKC-ANRKPVPFCCSEGLFYNPVIEVCDWPHNVDC 38
C KFY+C A + C GL ++ CDWP VDC
Sbjct: 902 CSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDC 940
Score = 34.7 bits (76), Expect = 0.062
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 159 CSHYHMCV-SGKTLSLACPSNLFYDPQKERCDFPANVSCEARVAP 202
C+ ++ C S ++L CP L + K+ CD+P V C P
Sbjct: 582 CAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYPHLVDCSRPTTP 626
Score = 34.7 bits (76), Expect = 0.062
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Query: 104 PITQTCEWSKNVECGTRVVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYH 163
P T T + ++ C T G V G + + +E NG CS ++
Sbjct: 1197 PPTPTTKPECDLHCQTLSPDGSCTVAPGYAVVNGMCVDTYFCKEKPNGHYADPRDCSRFY 1256
Query: 164 MCVSGKTLSL-ACPSNLFYDPQKERCDFPANVSCE 197
C + L CP+ L + +K CD+P V C+
Sbjct: 1257 QCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDCD 1291
Score = 34.7 bits (76), Expect = 0.062
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 1 CDKFYKC-ANRKPVPFCCSEGLFYNPVIEVCDWPHNVDC 38
C +FY+C A + C GL ++ CDWP VDC
Sbjct: 1252 CSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDC 1290
Score = 33.5 bits (73), Expect = 0.14
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 114 NVECGTRVVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSL 173
N + V PG E VN G C + C ++ NG CS ++ C + L
Sbjct: 864 NPDGSCTVAPGYEVVN-GMC-----VDTTFC-KDKPNGHYADPRDCSKFYQCDAFHRAFL 916
Query: 174 -ACPSNLFYDPQKERCDFPANVSCE 197
CP+ L + +K CD+P V C+
Sbjct: 917 HRCPAGLKWSVKKTACDWPRYVDCD 941
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 159 CSHYHMC-VSGKTLSLACPSNLFYDPQKERCDFPANVSC 196
CS + C + + +CP L ++ +K CD P NV+C
Sbjct: 1468 CSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHPVNVNC 1506
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 1 CDKFYKC-ANRKPVPFCCSEGLFYNPVIEVCDWPHNVDCGNRI 42
C +FY+C A+ K C +GL ++ CD P VDC I
Sbjct: 1357 CSRFYQCDASHKTFLHRCPDGLKWSVKKTACDLPLYVDCDRTI 1399
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 150 NGKLVAHNVCSHYHMCVSGKTLSL-ACPSNLFYDPQKERCDFPANVSCE 197
NG CS ++ C + L CP+ L + +K CD+P V C+
Sbjct: 998 NGHYADPMDCSRFYQCDAFHRAFLHRCPAGLKWSVKKTTCDWPRYVDCD 1046
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 150 NGKLVAHNVCSHYHMCVSGKTLSL-ACPSNLFYDPQKERCDFPANVSCEAR 199
NG CS ++ C + L C L + K CD+P NV C+ +
Sbjct: 788 NGYYADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNVDCDRK 838
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 1 CDKFYKC-ANRKPVPFCCSEGLFYNPVIEVCDWPHNVDC 38
C + Y+C + C GL +N CD P NV+C
Sbjct: 1468 CSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHPVNVNC 1506
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 129 NTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERC 188
N P P + CA + ++G CS Y+ C G++ CP L ++ + C
Sbjct: 213 NIPPGKATPAEDEKFCAGK-TDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIKSC 271
Query: 189 DFPANVSC 196
D P+ V+C
Sbjct: 272 DEPSKVNC 279
Score = 36.3 bits (80), Expect = 0.020
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 1 CDKFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNVDC 38
C +Y+C + C +GL +N +I+ CD P V+C
Sbjct: 242 CSAYYQCKKGRSFKKFCPDGLKFNALIKSCDEPSKVNC 279
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/38 (44%), Positives = 18/38 (47%)
Query: 1 CDKFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNVDC 38
C F C N C GL YN + CDWP NVDC
Sbjct: 91 CRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNVDC 128
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 156 HNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSC 196
++ C + C + CP L Y+ + ++CD+P NV C
Sbjct: 88 YDACRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNVDC 128
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 142 SLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEAR 199
S C + +NG C Y C + T CP+ L ++ K+ CD+P N CE +
Sbjct: 60 SFCKKR-ANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPCEEK 116
Score = 34.7 bits (76), Expect = 0.062
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 1 CDKFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNVDC 38
C + C+N+ C GL +N + CDWP N C
Sbjct: 76 CKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPC 113
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 1 CDKFYKC-ANRKPVPFCCSEGLFYNPVIEVCDWPHNVDC 38
C +FY+C A K C GL ++ CDWP VDC
Sbjct: 129 CSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 167
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 159 CSHYHMCVS-GKTLSLACPSNLFYDPQKERCDFPANVSCEARVAPVFLPP 207
CS ++ C + K +CPS L + K CD+P V C+ + + PP
Sbjct: 129 CSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDCD--IGGAYKPP 176
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 1 CDKFYKCAN-RKPVPFCCSEGLFYNPVIEVCDWPHNVDCGNR 41
C K+Y+C + K CSE L ++ V +CD +VDC +
Sbjct: 36 CSKYYQCDDFHKTHHRTCSEQLKWSAVKNICDHAADVDCDRK 77
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 159 CSHYHMCVS-GKTLSLACPSNLFYDPQKERCDFPANVSCEAR 199
CS Y+ C KT C L + K CD A+V C+ +
Sbjct: 36 CSKYYQCDDFHKTHHRTCSEQLKWSAVKNICDHAADVDCDRK 77
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 1 CDKFYKC-ANRKPVPFCCSEGLFYNPVIEVCDWPHNVDC 38
C +FY+C A K C GL ++ CDWP VDC
Sbjct: 36 CSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 74
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 159 CSHYHMCVS-GKTLSLACPSNLFYDPQKERCDFPANVSCEARVAPVFLPP 207
CS ++ C + K +CPS L + K CD+P V C+ + + PP
Sbjct: 36 CSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDCD--IGGAYKPP 83
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/60 (28%), Positives = 24/60 (40%)
Query: 143 LCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEARVAP 202
LCA + L C HY+ C GK + C +DP+ C++ C AP
Sbjct: 21 LCADKPHGAYLPDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKCVGTPAP 80
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 1 CDKFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNVDC 38
C +Y C K V C G ++P I C+W C
Sbjct: 37 CQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKC 74
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/38 (36%), Positives = 16/38 (42%)
Query: 1 CDKFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNVDC 38
C F C C GL +N + VCDW H V C
Sbjct: 472 CYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEVKC 509
>SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 64
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 1 CDKFYKCAN-RKPVPFCCSEGLFYNPVIEVCDWPHNVDCGNR 41
C K+Y+C + K CS+ L ++ V +CD +VDC +
Sbjct: 18 CSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDCDRK 59
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 159 CSHYHMCVS-GKTLSLACPSNLFYDPQKERCDFPANVSCEAR 199
CS Y+ C KT C L + K CD A+V C+ +
Sbjct: 18 CSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDCDRK 59
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 1 CDKFYKCAN-RKPVPFCCSEGLFYNPVIEVCDWPHNVDCGNR 41
C K+Y+C + K CS+ L ++ V +CD +VDC +
Sbjct: 85 CSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDCDRK 126
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 159 CSHYHMCVS-GKTLSLACPSNLFYDPQKERCDFPANVSCEAR 199
CS Y+ C KT C L + K CD A+V C+ +
Sbjct: 85 CSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDCDRK 126
>SB_56964| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 908
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 117 CGTRVVPGEENV-NTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSL 173
C TR+ N G C+ D + + G GK CS+Y+ C +G T L
Sbjct: 187 CETRICSYNNPCDNGGSCSVDGSGDYNCACRPGFTGKNCETATCSNYNPCYNGGTCGL 244
>SB_39562| Best HMM Match : DMAP1 (HMM E-Value=1.8)
Length = 351
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 96 ENCNQFYHPITQTCEWS--KNVECG-TRVVPGEENVNTGPC 133
E+C+Q HP+T TC+ KN G +V + N+G C
Sbjct: 94 ESCHQRVHPVTNTCDIDECKNEPFGENELVKTYNDTNSGSC 134
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 158 VCSHYHMCVSGKTLSLACPSNLFY 181
VC H C +G T + CPS +Y
Sbjct: 30 VCVRGHYCPAGTTREIPCPSGTYY 53
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 140 ALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCD 189
++S Q+ ++G + C Y C +G + CP+ L ++ + CD
Sbjct: 331 SVSNFCQDKADGNYAHPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKECD 380
>SB_48824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 127 NVNTGPCNCDPKQALSLCAQEG-SNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQ 184
++N GP + K LC+ E ++ + N YH + S +CPSN P+
Sbjct: 111 SINIGPLSATGKHECQLCSSEHVTHPNDLVPNSHYEYHPVENNVCYSSSCPSNATCKPR 169
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 125 EENVNTGPCNCDPKQALS-LCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACP--SNLFY 181
E N T PC CD K ALS C + G + + + + C +G C +F
Sbjct: 631 EFNNRTLPCECDTKGALSDECQEFGGQCQCRPYVIGRQCNRCKTGYYGFPNCKKCQCVFC 690
Query: 182 DPQKERCDFPAN---VSCE 197
+ + CD P N ++CE
Sbjct: 691 NEETGACDCPPNTVGLNCE 709
>SB_58619| Best HMM Match : OKR_DC_1_C (HMM E-Value=5.9)
Length = 289
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 178 NLFYDPQKERCDFPANVSCEARVAPVFLPPLN 209
NLF Q++ C F V +A+ P+F PP++
Sbjct: 106 NLF-QVQQQPCTFATTVHIDAKRQPIFRPPID 136
>SB_49295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 9/63 (14%)
Query: 167 SGKTLSLACPSN--------LFYDPQKERCDFPANVSCEARVAPVFLPPLNKHWEARQNI 218
SG T L+CP N L+ P +E C AN C + P L + ++ + Q+
Sbjct: 135 SGGTAGLSCPQNTVLDIQWALYARPAREPCPHSANYICNVQY-PQTLAKVREYCQGEQSC 193
Query: 219 RHY 221
Y
Sbjct: 194 SFY 196
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 159 CSHYHMCVSGKTLSLACPSNLFYDP-QKERC 188
C+ H C G + + CPS + D QK+ C
Sbjct: 266 CTKGHYCPKGTSAPVKCPSGSYQDELQKDSC 296
Score = 27.5 bits (58), Expect = 9.4
Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 2/99 (2%)
Query: 88 NNGGLVPHENCNQFYHPITQTCEWSKNVECGTRVVPGEENVNTGPCNCDPKQALSLCA-Q 146
N+G +P Y P + S+ VEC E + +CD S A
Sbjct: 1518 NSGFHIPAACPRGTYGPKERLTNLSECVECPGGQFCAEPGLAAPNGSCDAGYYCSGRAIL 1577
Query: 147 EGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQK 185
+ G+ NVC H C G T CP F + K
Sbjct: 1578 KNPTGEAYG-NVCPAGHYCPIGTTTPFKCPPGTFNNKTK 1615
>SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/65 (26%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Query: 80 PSLCALPANNGGLVPHENCNQFYHPITQTCEWSKNVECGTRVVPGEENVNTGPCNCDPKQ 139
P++C +P NGG N P K EC + G VN C C
Sbjct: 435 PTICKVPCENGGTCIDPVSNTCQCPPNWRGATCKQAECVPECLNGGVCVNR-QCQCPQGY 493
Query: 140 ALSLC 144
+ C
Sbjct: 494 TMEAC 498
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.136 0.481
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,608,979
Number of Sequences: 59808
Number of extensions: 344670
Number of successful extensions: 690
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 608
Number of HSP's gapped (non-prelim): 87
length of query: 222
length of database: 16,821,457
effective HSP length: 79
effective length of query: 143
effective length of database: 12,096,625
effective search space: 1729817375
effective search space used: 1729817375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
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