BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001491-TA|BGIBMGA001491-PA|IPR002557|Chitin binding Peritrophin-A (222 letters) Database: celegans 27,539 sequences; 12,573,161 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 44 1e-04 U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 43 2e-04 U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 39 0.002 Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 35 0.053 DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 35 0.053 U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 34 0.070 DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 34 0.070 U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 33 0.12 Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.66 Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 8.1 Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 8.1 AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 27 8.1 AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 27 8.1 AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 27 8.1 AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 27 8.1 AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.1 AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.1 >Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein H02I12.1 protein. Length = 1319 Score = 43.6 bits (98), Expect = 1e-04 Identities = 15/36 (41%), Positives = 21/36 (58%) Query: 1 CDKFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNV 36 C+ FY+C + V C G +NP++ VCDWP V Sbjct: 1258 CEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAV 1293 Score = 43.2 bits (97), Expect = 2e-04 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 9/76 (11%) Query: 135 CDPKQALSLCAQEG-SNGKLVAH-------NVCSHYHMCVSGKTLSLACPSNLFYDPQKE 186 CD Q +S C G +NG+ H N C ++ CV G+ + + CPS ++P Sbjct: 1226 CDYPQKVSGCENHGQTNGECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLS 1285 Query: 187 RCDFPANV-SCEARVA 201 CD+P+ V SC + + Sbjct: 1286 VCDWPSAVPSCSGQAS 1301 Score = 29.1 bits (62), Expect = 2.7 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 3 KFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNV-DCGNR 41 K+ +C+N + C E L++N + C + V +CG++ Sbjct: 707 KYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQ 746 Score = 27.5 bits (58), Expect = 8.1 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Query: 159 CSHYHMCVSGKTLSL-ACPSNLFYDPQKERCDFPANVS-CE 197 CS C G+ +C S+L ++ +CD+P VS CE Sbjct: 1196 CSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCE 1236 >U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical protein R02F2.4 protein. Length = 431 Score = 42.7 bits (96), Expect = 2e-04 Identities = 42/198 (21%), Positives = 69/198 (34%), Gaps = 18/198 (9%) Query: 3 KFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNV-DCGNRITNQVHNRTXXXXXXXXXXX 61 +F C + + C E L Y+ +E CDW HNV +CG + Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEEGEENEFSGDGSGESSGDEEI 100 Query: 62 XXXXXXXXXTCDWAPSDAPSLCALPANNGGLVPHENCNQFYHPITQTCEWSKNVECGTRV 121 + D ++C + G+ C+ Y I + + C T + Sbjct: 101 TFGDSSGESSGD---ELLENVC--ESLKDGVYSSGTCSSSY--IICNSGSPRFLSCSTPL 153 Query: 122 VPGEENVNTGPCNCDPKQALSLCAQEG-----SNGKLVAHNVCSHYHMCVSGKTLSLACP 176 + N C K + C+Q S+G + + + C G CP Sbjct: 154 IYDPTNK-----KCSWKGMIDECSQVSGEYCESDGNISKSECSNVFFSCSEGIAHRRNCP 208 Query: 177 SNLFYDPQKERCDFPANV 194 +NL ++P CD+P NV Sbjct: 209 ANLVFNPAISSCDWPKNV 226 Score = 35.5 bits (78), Expect = 0.031 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Query: 4 FYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNV-DCGNR 41 F+ C+ C L +NP I CDWP NV DC + Sbjct: 194 FFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEK 232 Score = 35.1 bits (77), Expect = 0.040 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 22/107 (20%) Query: 91 GLVPHENC--NQFYHPITQTCEWSKNV-ECGTRVVPGEENVNTGPCNCDPKQALSLCAQE 147 G+ NC N ++P +C+W KNV +C + E+ N G D + C+ Sbjct: 200 GIAHRRNCPANLVFNPAISSCDWPKNVMDCSEK---SEKPQNCG--EVDGYFSFGRCS-- 252 Query: 148 GSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 194 S + C +G + + CP L + + + CD+ NV Sbjct: 253 ------------SSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNV 287 Score = 32.3 bits (70), Expect = 0.28 Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 4 FYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNVD 37 F C N P+ C +GL ++ ++CD+ NVD Sbjct: 255 FSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVD 288 >U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical protein C39D10.7 protein. Length = 1185 Score = 39.1 bits (87), Expect = 0.002 Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Query: 155 AHNVC-SHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 194 A +C S +++C +G+ ++ CP+NL ++P CD+ NV Sbjct: 583 ASGLCKSVFYICANGQVVATTCPANLIFNPYVGECDYSTNV 623 Score = 37.5 bits (83), Expect = 0.008 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 1 CDKFY-KCANRKPVPFCCSEGLFYNPVIEVCDWPHNVD 37 C+K+ KC NRK F C GL+Y+ + + CD NV+ Sbjct: 701 CEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVE 738 Score = 36.3 bits (80), Expect = 0.017 Identities = 48/206 (23%), Positives = 73/206 (35%), Gaps = 23/206 (11%) Query: 3 KFYKCANRKPVPFCCSEGLFYNPVIEVCDWP---HNVDCGNRITNQVHNRTXXXXXXXXX 59 K+ +C N C EGL+++ ++ C+ H G+R+T V R Sbjct: 57 KYLQCVNNVEYEQSCPEGLYFDRLLARCERRSSNHLCATGDRVTLNV--RQKAVSINCVG 114 Query: 60 XXXXXXXXXXXTCDWAPSDAPSLCALPANNGGLVPHENCNQFYHPITQTCEWSKNVECGT 119 C+ + CA + P++ Q Y PI + C++ N Sbjct: 115 RLSGDYALDKTVCN----ENYYQCANGISYMRKCPYQ---QVYVPILKRCDYHTNCNASG 167 Query: 120 RVVPGEENVNTGPC-NCDPKQALSLCAQEGSNG---KLVAH-----NV-CSHYH-MCVSG 168 V P + D + + G NG K+ NV CS Y C +G Sbjct: 168 GVKDQAAAAYASPTYDSDNYIVTTKEFENGHNGLDCKVTGDMHFTDNVKCSPYFWQCSNG 227 Query: 169 KTLSLACPSNLFYDPQKERCDFPANV 194 K CP L Y + CDFP +V Sbjct: 228 KLFRKTCPEKLIYVLDQNLCDFPESV 253 Score = 35.9 bits (79), Expect = 0.023 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Query: 4 FYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNV-DC 38 FY CAN + V C L +NP + CD+ NV DC Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDYSTNVRDC 626 Score = 34.3 bits (75), Expect = 0.070 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 159 CSHYHM-CVSGKTLSLACPSNLFYDPQKERCDFPANV 194 C Y + C + KT CPS L+Y +++CD NV Sbjct: 701 CEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENV 737 Score = 33.5 bits (73), Expect = 0.12 Identities = 43/209 (20%), Positives = 72/209 (34%), Gaps = 26/209 (12%) Query: 1 CDKFY-KCANRKPVPFCCSEGLFYNPVIEVCDWPHNV-DCGNRITNQVHNRTXXXXXXXX 58 C+ +Y C N + C GLFY+ + CD+ +V DC Sbjct: 800 CEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHVEDCPEYKPTPSTTPAAEQPGTTK 859 Query: 59 XXXXXXXXXXXXTCDWAPSDAPSLCALPANNG---GLVPHENCNQFYHPITQTCEWSKNV 115 + P D L + +G G+ C+Q Y Q + Sbjct: 860 YTTYNYPNIDYTSTTPGPVDTTPLAKAFSCSGRPDGIYALPYCSQDYVQCMQGRSLISS- 918 Query: 116 ECGTRVVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVC-------------SHY 162 C + E+N G C K + C + G ++ N C S+Y Sbjct: 919 -CAPGLFYNEKN---GMCAY--KHTVDTC-KIGKGSDIIDSNACFGKSDGYYSAGCSSYY 971 Query: 163 HMCVSGKTLSLACPSNLFYDPQKERCDFP 191 C+ + ++CP++L + + E+C FP Sbjct: 972 FSCIDEQIRKMSCPNSLKFSKESEKCVFP 1000 Score = 33.1 bits (72), Expect = 0.16 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 138 KQALSL-CAQEGSNGKLVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVS 195 ++A+S+ C S + VC+ +Y+ C +G + CP Y P +RCD+ N + Sbjct: 105 QKAVSINCVGRLSGDYALDKTVCNENYYQCANGISYMRKCPYQQVYVPILKRCDYHTNCN 164 Query: 196 CEARV 200 V Sbjct: 165 ASGGV 169 Score = 31.5 bits (68), Expect = 0.50 Identities = 48/209 (22%), Positives = 75/209 (35%), Gaps = 14/209 (6%) Query: 4 FYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNV-DCGNRITNQVHNRTXXXXXXXXXXXX 62 F++C+N K C E L Y +CD+P +V DC ++ R Sbjct: 221 FWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDCPEYNGSETSYRAPKTTTSSSSYGS 280 Query: 63 XXXXXXXXTCDWAPSDAPSLCALPANNGGLVPHENCNQFYHPITQTCEWSKNVECGTRVV 122 T +AP+ AP + + P VP +P Q + V T Sbjct: 281 IAEAPVDPT-PYAPASAP-VYSPPRTT--YVPRSTSAAPPNPPPQNPTAAPYVP--TEAT 334 Query: 123 PGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYD 182 P V + +P ++G G H + + C +G + C NL +D Sbjct: 335 PSP--VFSSTVRYNPAVHGDCKNRDGIFGIKECH---ASFLSCDNGVGRVIQCADNLVFD 389 Query: 183 PQKERCDFPANVSCEARVAPVFLPPLNKH 211 + C+F A + E R P +P L H Sbjct: 390 TRVSACEFAA-ICLEPR-KPEDVPVLYNH 416 Score = 31.5 bits (68), Expect = 0.50 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 150 NGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCE 197 NGK + + C G+ + CP +L ++ CDF N CE Sbjct: 438 NGKYIKEACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAEN--CE 483 Score = 31.1 bits (67), Expect = 0.66 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 159 CSHYHM-CVSGKTLSLACPSNLFYDPQKERCDFPANV 194 C Y++ C + +T CP+ LFY RCD+ +V Sbjct: 800 CEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHV 836 Score = 28.7 bits (61), Expect = 3.5 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Query: 149 SNGKLVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPA-NVSC 196 SNG L +CS HY +C +G+ S C + L Y+ + C++ + N C Sbjct: 1028 SNG-LHHLKMCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNKDC 1076 Score = 27.9 bits (59), Expect = 6.1 Identities = 12/37 (32%), Positives = 17/37 (45%) Query: 153 LVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCD 189 L A S Y CV+ +CP L++D RC+ Sbjct: 49 LYAVGCSSKYLQCVNNVEYEQSCPEGLYFDRLLARCE 85 >Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical protein C07G2.1a protein. Length = 584 Score = 34.7 bits (76), Expect = 0.053 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Query: 159 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEARVAPV 203 CS HY CV+G+ C + LF+ P++ RC PA+ E V Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSPEQARC-APADQIAECHQTTV 581 Score = 34.3 bits (75), Expect = 0.070 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Query: 159 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 194 CS HY C +G + + CP+ L +D + CD+ NV Sbjct: 227 CSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNV 263 Score = 31.1 bits (67), Expect = 0.66 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 153 LVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 194 L A CS + C G + + CP++L YDP+ C++ NV Sbjct: 68 LYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNV 110 Score = 28.7 bits (61), Expect = 3.5 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%) Query: 1 CDKFYK-CANRKPVPFCCSEGLFYNP 25 C + YK C N + F C GLF++P Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSP 562 >DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin proteoglycan-1 protein. Length = 584 Score = 34.7 bits (76), Expect = 0.053 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Query: 159 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEARVAPV 203 CS HY CV+G+ C + LF+ P++ RC PA+ E V Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSPEQARC-APADQIAECHQTTV 581 Score = 34.3 bits (75), Expect = 0.070 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Query: 159 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 194 CS HY C +G + + CP+ L +D + CD+ NV Sbjct: 227 CSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNV 263 Score = 31.1 bits (67), Expect = 0.66 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 153 LVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 194 L A CS + C G + + CP++L YDP+ C++ NV Sbjct: 68 LYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNV 110 Score = 28.7 bits (61), Expect = 3.5 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%) Query: 1 CDKFYK-CANRKPVPFCCSEGLFYNP 25 C + YK C N + F C GLF++P Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSP 562 >U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical protein B0280.5 protein. Length = 524 Score = 34.3 bits (75), Expect = 0.070 Identities = 12/36 (33%), Positives = 21/36 (58%) Query: 160 SHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVS 195 S + C +G+ + + CP+ L + RCD+ +NVS Sbjct: 322 SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVS 357 Score = 33.1 bits (72), Expect = 0.16 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Query: 17 CSEGLFYNPVIEVCDWPHNV-DCGNRITNQ 45 C L +NP I VCDWP +V +C T Q Sbjct: 277 CPASLVFNPTILVCDWPRDVAECAGLPTPQ 306 Score = 31.9 bits (69), Expect = 0.38 Identities = 10/29 (34%), Positives = 17/29 (58%) Query: 160 SHYHMCVSGKTLSLACPSNLFYDPQKERC 188 ++Y C + L+CP+ LFYD ++C Sbjct: 153 TYYFFCTTNTARFLSCPTPLFYDADSQKC 181 Score = 31.1 bits (67), Expect = 0.66 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 147 EGSNGKLVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVS 195 EG + + VCS ++ C G + CP++L ++P CD+P +V+ Sbjct: 248 EGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVA 297 Score = 29.9 bits (64), Expect = 1.5 Identities = 10/20 (50%), Positives = 12/20 (60%) Query: 17 CSEGLFYNPVIEVCDWPHNV 36 C L YN + +CDW HNV Sbjct: 54 CPADLIYNEPLLICDWRHNV 73 >DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin proteoglycan-2 protein. Length = 524 Score = 34.3 bits (75), Expect = 0.070 Identities = 12/36 (33%), Positives = 21/36 (58%) Query: 160 SHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVS 195 S + C +G+ + + CP+ L + RCD+ +NVS Sbjct: 322 SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVS 357 Score = 33.1 bits (72), Expect = 0.16 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Query: 17 CSEGLFYNPVIEVCDWPHNV-DCGNRITNQ 45 C L +NP I VCDWP +V +C T Q Sbjct: 277 CPASLVFNPTILVCDWPRDVAECAGLPTPQ 306 Score = 31.9 bits (69), Expect = 0.38 Identities = 10/29 (34%), Positives = 17/29 (58%) Query: 160 SHYHMCVSGKTLSLACPSNLFYDPQKERC 188 ++Y C + L+CP+ LFYD ++C Sbjct: 153 TYYFFCTTNTARFLSCPTPLFYDADSQKC 181 Score = 31.1 bits (67), Expect = 0.66 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 147 EGSNGKLVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVS 195 EG + + VCS ++ C G + CP++L ++P CD+P +V+ Sbjct: 248 EGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVA 297 Score = 29.9 bits (64), Expect = 1.5 Identities = 10/20 (50%), Positives = 12/20 (60%) Query: 17 CSEGLFYNPVIEVCDWPHNV 36 C L YN + +CDW HNV Sbjct: 54 CPADLIYNEPLLICDWRHNV 73 >U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein 1 protein. Length = 617 Score = 33.5 bits (73), Expect = 0.12 Identities = 15/48 (31%), Positives = 23/48 (47%) Query: 149 SNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSC 196 S+G N C + +C+S K+ S++CPS L Y + C C Sbjct: 485 SDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGC 532 Score = 28.7 bits (61), Expect = 3.5 Identities = 13/38 (34%), Positives = 17/38 (44%) Query: 1 CDKFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNVDC 38 C KF +C N F C GL ++ +CD P C Sbjct: 578 CLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615 Score = 28.3 bits (60), Expect = 4.6 Identities = 11/38 (28%), Positives = 17/38 (44%) Query: 159 CSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSC 196 C + CV+G + + CP+ L + CD P C Sbjct: 578 CLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615 >Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical protein C07G2.1b protein. Length = 160 Score = 31.1 bits (67), Expect = 0.66 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 153 LVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 194 L A CS + C G + + CP++L YDP+ C++ NV Sbjct: 68 LYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNV 110 >Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein K08C7.3b protein. Length = 3672 Score = 27.5 bits (58), Expect = 8.1 Identities = 10/29 (34%), Positives = 13/29 (44%) Query: 109 CEWSKNVECGTRVVPGEENVNTGPCNCDP 137 C+ + CGT + NV G C C P Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059 >Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein K08C7.3a protein. Length = 3704 Score = 27.5 bits (58), Expect = 8.1 Identities = 10/29 (34%), Positives = 13/29 (44%) Query: 109 CEWSKNVECGTRVVPGEENVNTGPCNCDP 137 C+ + CGT + NV G C C P Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059 >AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical protein Y47H9C.4c protein. Length = 1045 Score = 27.5 bits (58), Expect = 8.1 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Query: 112 SKNVECGTRVVPG------EENVNTGPC-NCDPKQALSLCAQEGSNGKLVAHN 157 +K V C + P +E V PC + DPK + L GS+G HN Sbjct: 623 TKGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHN 675 >AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical protein Y47H9C.4b protein. Length = 1070 Score = 27.5 bits (58), Expect = 8.1 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Query: 112 SKNVECGTRVVPG------EENVNTGPC-NCDPKQALSLCAQEGSNGKLVAHN 157 +K V C + P +E V PC + DPK + L GS+G HN Sbjct: 623 TKGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHN 675 >AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical protein Y47H9C.4a protein. Length = 1111 Score = 27.5 bits (58), Expect = 8.1 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Query: 112 SKNVECGTRVVPG------EENVNTGPC-NCDPKQALSLCAQEGSNGKLVAHN 157 +K V C + P +E V PC + DPK + L GS+G HN Sbjct: 623 TKGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHN 675 >AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. Length = 1111 Score = 27.5 bits (58), Expect = 8.1 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Query: 112 SKNVECGTRVVPG------EENVNTGPC-NCDPKQALSLCAQEGSNGKLVAHN 157 +K V C + P +E V PC + DPK + L GS+G HN Sbjct: 623 TKGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHN 675 >AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha chain protein. Length = 3704 Score = 27.5 bits (58), Expect = 8.1 Identities = 10/29 (34%), Positives = 13/29 (44%) Query: 109 CEWSKNVECGTRVVPGEENVNTGPCNCDP 137 C+ + CGT + NV G C C P Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059 >AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha protein. Length = 3704 Score = 27.5 bits (58), Expect = 8.1 Identities = 10/29 (34%), Positives = 13/29 (44%) Query: 109 CEWSKNVECGTRVVPGEENVNTGPCNCDP 137 C+ + CGT + NV G C C P Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059 Database: celegans Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 12,573,161 Number of sequences in database: 27,539 Lambda K H 0.321 0.136 0.481 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,342,699 Number of Sequences: 27539 Number of extensions: 271994 Number of successful extensions: 614 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 521 Number of HSP's gapped (non-prelim): 117 length of query: 222 length of database: 12,573,161 effective HSP length: 79 effective length of query: 143 effective length of database: 10,397,580 effective search space: 1486853940 effective search space used: 1486853940 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 58 (27.5 bits)
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