Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001491-TA|BGIBMGA001491-PA|IPR002557|Chitin binding
Peritrophin-A
(222 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 39 0.002
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 35 0.053
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 35 0.053
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 34 0.070
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 34 0.070
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 33 0.12
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 27 8.1
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 27 8.1
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 27 8.1
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 27 8.1
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.1
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.1
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 43.6 bits (98), Expect = 1e-04
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 1 CDKFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNV 36
C+ FY+C + V C G +NP++ VCDWP V
Sbjct: 1258 CEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAV 1293
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 135 CDPKQALSLCAQEG-SNGKLVAH-------NVCSHYHMCVSGKTLSLACPSNLFYDPQKE 186
CD Q +S C G +NG+ H N C ++ CV G+ + + CPS ++P
Sbjct: 1226 CDYPQKVSGCENHGQTNGECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLS 1285
Query: 187 RCDFPANV-SCEARVA 201
CD+P+ V SC + +
Sbjct: 1286 VCDWPSAVPSCSGQAS 1301
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 3 KFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNV-DCGNR 41
K+ +C+N + C E L++N + C + V +CG++
Sbjct: 707 KYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQ 746
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 159 CSHYHMCVSGKTLSL-ACPSNLFYDPQKERCDFPANVS-CE 197
CS C G+ +C S+L ++ +CD+P VS CE
Sbjct: 1196 CSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCE 1236
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 42.7 bits (96), Expect = 2e-04
Identities = 42/198 (21%), Positives = 69/198 (34%), Gaps = 18/198 (9%)
Query: 3 KFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNV-DCGNRITNQVHNRTXXXXXXXXXXX 61
+F C + + C E L Y+ +E CDW HNV +CG +
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEEGEENEFSGDGSGESSGDEEI 100
Query: 62 XXXXXXXXXTCDWAPSDAPSLCALPANNGGLVPHENCNQFYHPITQTCEWSKNVECGTRV 121
+ D ++C + G+ C+ Y I + + C T +
Sbjct: 101 TFGDSSGESSGD---ELLENVC--ESLKDGVYSSGTCSSSY--IICNSGSPRFLSCSTPL 153
Query: 122 VPGEENVNTGPCNCDPKQALSLCAQEG-----SNGKLVAHNVCSHYHMCVSGKTLSLACP 176
+ N C K + C+Q S+G + + + C G CP
Sbjct: 154 IYDPTNK-----KCSWKGMIDECSQVSGEYCESDGNISKSECSNVFFSCSEGIAHRRNCP 208
Query: 177 SNLFYDPQKERCDFPANV 194
+NL ++P CD+P NV
Sbjct: 209 ANLVFNPAISSCDWPKNV 226
Score = 35.5 bits (78), Expect = 0.031
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 4 FYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNV-DCGNR 41
F+ C+ C L +NP I CDWP NV DC +
Sbjct: 194 FFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEK 232
Score = 35.1 bits (77), Expect = 0.040
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 22/107 (20%)
Query: 91 GLVPHENC--NQFYHPITQTCEWSKNV-ECGTRVVPGEENVNTGPCNCDPKQALSLCAQE 147
G+ NC N ++P +C+W KNV +C + E+ N G D + C+
Sbjct: 200 GIAHRRNCPANLVFNPAISSCDWPKNVMDCSEK---SEKPQNCG--EVDGYFSFGRCS-- 252
Query: 148 GSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 194
S + C +G + + CP L + + + CD+ NV
Sbjct: 253 ------------SSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNV 287
Score = 32.3 bits (70), Expect = 0.28
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 4 FYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNVD 37
F C N P+ C +GL ++ ++CD+ NVD
Sbjct: 255 FSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVD 288
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 39.1 bits (87), Expect = 0.002
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 155 AHNVC-SHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 194
A +C S +++C +G+ ++ CP+NL ++P CD+ NV
Sbjct: 583 ASGLCKSVFYICANGQVVATTCPANLIFNPYVGECDYSTNV 623
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 1 CDKFY-KCANRKPVPFCCSEGLFYNPVIEVCDWPHNVD 37
C+K+ KC NRK F C GL+Y+ + + CD NV+
Sbjct: 701 CEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVE 738
Score = 36.3 bits (80), Expect = 0.017
Identities = 48/206 (23%), Positives = 73/206 (35%), Gaps = 23/206 (11%)
Query: 3 KFYKCANRKPVPFCCSEGLFYNPVIEVCDWP---HNVDCGNRITNQVHNRTXXXXXXXXX 59
K+ +C N C EGL+++ ++ C+ H G+R+T V R
Sbjct: 57 KYLQCVNNVEYEQSCPEGLYFDRLLARCERRSSNHLCATGDRVTLNV--RQKAVSINCVG 114
Query: 60 XXXXXXXXXXXTCDWAPSDAPSLCALPANNGGLVPHENCNQFYHPITQTCEWSKNVECGT 119
C+ + CA + P++ Q Y PI + C++ N
Sbjct: 115 RLSGDYALDKTVCN----ENYYQCANGISYMRKCPYQ---QVYVPILKRCDYHTNCNASG 167
Query: 120 RVVPGEENVNTGPC-NCDPKQALSLCAQEGSNG---KLVAH-----NV-CSHYH-MCVSG 168
V P + D + + G NG K+ NV CS Y C +G
Sbjct: 168 GVKDQAAAAYASPTYDSDNYIVTTKEFENGHNGLDCKVTGDMHFTDNVKCSPYFWQCSNG 227
Query: 169 KTLSLACPSNLFYDPQKERCDFPANV 194
K CP L Y + CDFP +V
Sbjct: 228 KLFRKTCPEKLIYVLDQNLCDFPESV 253
Score = 35.9 bits (79), Expect = 0.023
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 4 FYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNV-DC 38
FY CAN + V C L +NP + CD+ NV DC
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDYSTNVRDC 626
Score = 34.3 bits (75), Expect = 0.070
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 159 CSHYHM-CVSGKTLSLACPSNLFYDPQKERCDFPANV 194
C Y + C + KT CPS L+Y +++CD NV
Sbjct: 701 CEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENV 737
Score = 33.5 bits (73), Expect = 0.12
Identities = 43/209 (20%), Positives = 72/209 (34%), Gaps = 26/209 (12%)
Query: 1 CDKFY-KCANRKPVPFCCSEGLFYNPVIEVCDWPHNV-DCGNRITNQVHNRTXXXXXXXX 58
C+ +Y C N + C GLFY+ + CD+ +V DC
Sbjct: 800 CEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHVEDCPEYKPTPSTTPAAEQPGTTK 859
Query: 59 XXXXXXXXXXXXTCDWAPSDAPSLCALPANNG---GLVPHENCNQFYHPITQTCEWSKNV 115
+ P D L + +G G+ C+Q Y Q +
Sbjct: 860 YTTYNYPNIDYTSTTPGPVDTTPLAKAFSCSGRPDGIYALPYCSQDYVQCMQGRSLISS- 918
Query: 116 ECGTRVVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVC-------------SHY 162
C + E+N G C K + C + G ++ N C S+Y
Sbjct: 919 -CAPGLFYNEKN---GMCAY--KHTVDTC-KIGKGSDIIDSNACFGKSDGYYSAGCSSYY 971
Query: 163 HMCVSGKTLSLACPSNLFYDPQKERCDFP 191
C+ + ++CP++L + + E+C FP
Sbjct: 972 FSCIDEQIRKMSCPNSLKFSKESEKCVFP 1000
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 138 KQALSL-CAQEGSNGKLVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVS 195
++A+S+ C S + VC+ +Y+ C +G + CP Y P +RCD+ N +
Sbjct: 105 QKAVSINCVGRLSGDYALDKTVCNENYYQCANGISYMRKCPYQQVYVPILKRCDYHTNCN 164
Query: 196 CEARV 200
V
Sbjct: 165 ASGGV 169
Score = 31.5 bits (68), Expect = 0.50
Identities = 48/209 (22%), Positives = 75/209 (35%), Gaps = 14/209 (6%)
Query: 4 FYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNV-DCGNRITNQVHNRTXXXXXXXXXXXX 62
F++C+N K C E L Y +CD+P +V DC ++ R
Sbjct: 221 FWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDCPEYNGSETSYRAPKTTTSSSSYGS 280
Query: 63 XXXXXXXXTCDWAPSDAPSLCALPANNGGLVPHENCNQFYHPITQTCEWSKNVECGTRVV 122
T +AP+ AP + + P VP +P Q + V T
Sbjct: 281 IAEAPVDPT-PYAPASAP-VYSPPRTT--YVPRSTSAAPPNPPPQNPTAAPYVP--TEAT 334
Query: 123 PGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYD 182
P V + +P ++G G H + + C +G + C NL +D
Sbjct: 335 PSP--VFSSTVRYNPAVHGDCKNRDGIFGIKECH---ASFLSCDNGVGRVIQCADNLVFD 389
Query: 183 PQKERCDFPANVSCEARVAPVFLPPLNKH 211
+ C+F A + E R P +P L H
Sbjct: 390 TRVSACEFAA-ICLEPR-KPEDVPVLYNH 416
Score = 31.5 bits (68), Expect = 0.50
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 150 NGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCE 197
NGK + + C G+ + CP +L ++ CDF N CE
Sbjct: 438 NGKYIKEACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAEN--CE 483
Score = 31.1 bits (67), Expect = 0.66
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 159 CSHYHM-CVSGKTLSLACPSNLFYDPQKERCDFPANV 194
C Y++ C + +T CP+ LFY RCD+ +V
Sbjct: 800 CEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHV 836
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 149 SNGKLVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPA-NVSC 196
SNG L +CS HY +C +G+ S C + L Y+ + C++ + N C
Sbjct: 1028 SNG-LHHLKMCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNKDC 1076
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 153 LVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCD 189
L A S Y CV+ +CP L++D RC+
Sbjct: 49 LYAVGCSSKYLQCVNNVEYEQSCPEGLYFDRLLARCE 85
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.053
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 159 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEARVAPV 203
CS HY CV+G+ C + LF+ P++ RC PA+ E V
Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSPEQARC-APADQIAECHQTTV 581
Score = 34.3 bits (75), Expect = 0.070
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 159 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 194
CS HY C +G + + CP+ L +D + CD+ NV
Sbjct: 227 CSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNV 263
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 153 LVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 194
L A CS + C G + + CP++L YDP+ C++ NV
Sbjct: 68 LYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNV 110
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 1 CDKFYK-CANRKPVPFCCSEGLFYNP 25
C + YK C N + F C GLF++P
Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSP 562
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.053
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 159 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEARVAPV 203
CS HY CV+G+ C + LF+ P++ RC PA+ E V
Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSPEQARC-APADQIAECHQTTV 581
Score = 34.3 bits (75), Expect = 0.070
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 159 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 194
CS HY C +G + + CP+ L +D + CD+ NV
Sbjct: 227 CSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNV 263
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 153 LVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 194
L A CS + C G + + CP++L YDP+ C++ NV
Sbjct: 68 LYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNV 110
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 1 CDKFYK-CANRKPVPFCCSEGLFYNP 25
C + YK C N + F C GLF++P
Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSP 562
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.070
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 160 SHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVS 195
S + C +G+ + + CP+ L + RCD+ +NVS
Sbjct: 322 SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVS 357
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 17 CSEGLFYNPVIEVCDWPHNV-DCGNRITNQ 45
C L +NP I VCDWP +V +C T Q
Sbjct: 277 CPASLVFNPTILVCDWPRDVAECAGLPTPQ 306
Score = 31.9 bits (69), Expect = 0.38
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 160 SHYHMCVSGKTLSLACPSNLFYDPQKERC 188
++Y C + L+CP+ LFYD ++C
Sbjct: 153 TYYFFCTTNTARFLSCPTPLFYDADSQKC 181
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 147 EGSNGKLVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVS 195
EG + + VCS ++ C G + CP++L ++P CD+P +V+
Sbjct: 248 EGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVA 297
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 17 CSEGLFYNPVIEVCDWPHNV 36
C L YN + +CDW HNV
Sbjct: 54 CPADLIYNEPLLICDWRHNV 73
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.070
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 160 SHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVS 195
S + C +G+ + + CP+ L + RCD+ +NVS
Sbjct: 322 SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVS 357
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 17 CSEGLFYNPVIEVCDWPHNV-DCGNRITNQ 45
C L +NP I VCDWP +V +C T Q
Sbjct: 277 CPASLVFNPTILVCDWPRDVAECAGLPTPQ 306
Score = 31.9 bits (69), Expect = 0.38
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 160 SHYHMCVSGKTLSLACPSNLFYDPQKERC 188
++Y C + L+CP+ LFYD ++C
Sbjct: 153 TYYFFCTTNTARFLSCPTPLFYDADSQKC 181
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 147 EGSNGKLVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVS 195
EG + + VCS ++ C G + CP++L ++P CD+P +V+
Sbjct: 248 EGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVA 297
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 17 CSEGLFYNPVIEVCDWPHNV 36
C L YN + +CDW HNV
Sbjct: 54 CPADLIYNEPLLICDWRHNV 73
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 149 SNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSC 196
S+G N C + +C+S K+ S++CPS L Y + C C
Sbjct: 485 SDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGC 532
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 1 CDKFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNVDC 38
C KF +C N F C GL ++ +CD P C
Sbjct: 578 CLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 159 CSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSC 196
C + CV+G + + CP+ L + CD P C
Sbjct: 578 CLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 153 LVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 194
L A CS + C G + + CP++L YDP+ C++ NV
Sbjct: 68 LYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNV 110
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 109 CEWSKNVECGTRVVPGEENVNTGPCNCDP 137
C+ + CGT + NV G C C P
Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 109 CEWSKNVECGTRVVPGEENVNTGPCNCDP 137
C+ + CGT + NV G C C P
Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 112 SKNVECGTRVVPG------EENVNTGPC-NCDPKQALSLCAQEGSNGKLVAHN 157
+K V C + P +E V PC + DPK + L GS+G HN
Sbjct: 623 TKGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHN 675
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 112 SKNVECGTRVVPG------EENVNTGPC-NCDPKQALSLCAQEGSNGKLVAHN 157
+K V C + P +E V PC + DPK + L GS+G HN
Sbjct: 623 TKGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHN 675
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 112 SKNVECGTRVVPG------EENVNTGPC-NCDPKQALSLCAQEGSNGKLVAHN 157
+K V C + P +E V PC + DPK + L GS+G HN
Sbjct: 623 TKGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHN 675
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 112 SKNVECGTRVVPG------EENVNTGPC-NCDPKQALSLCAQEGSNGKLVAHN 157
+K V C + P +E V PC + DPK + L GS+G HN
Sbjct: 623 TKGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHN 675
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 109 CEWSKNVECGTRVVPGEENVNTGPCNCDP 137
C+ + CGT + NV G C C P
Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 109 CEWSKNVECGTRVVPGEENVNTGPCNCDP 137
C+ + CGT + NV G C C P
Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.136 0.481
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,342,699
Number of Sequences: 27539
Number of extensions: 271994
Number of successful extensions: 614
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 521
Number of HSP's gapped (non-prelim): 117
length of query: 222
length of database: 12,573,161
effective HSP length: 79
effective length of query: 143
effective length of database: 10,397,580
effective search space: 1486853940
effective search space used: 1486853940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
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