GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001491-TA|BGIBMGA001491-PA|IPR002557|Chitin binding
Peritrophin-A
         (222 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    26   0.25 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    26   0.25 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.0  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 104 PITQTCEWSKNVECGTRVVPGEENVNTGPCNCDPKQALSLCA 145
           PI +  E  K VEC        EN  +  CN   KQ   L A
Sbjct: 206 PIERILEAEKRVECKMEQQGNYENAVSHICNATNKQLFQLVA 247


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 104 PITQTCEWSKNVECGTRVVPGEENVNTGPCNCDPKQALSLCA 145
           PI +  E  K VEC        EN  +  CN   KQ   L A
Sbjct: 206 PIERILEAEKRVECKMEQQGNYENAVSHICNATNKQLFQLVA 247


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
          protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 31 DWPHNVDCGNRITNQVHNRT 50
          D+ HN   GN  T  V +RT
Sbjct: 17 DFQHNWQVGNEYTYLVRSRT 36


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.136    0.481 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,414
Number of Sequences: 429
Number of extensions: 2618
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 3
length of query: 222
length of database: 140,377
effective HSP length: 55
effective length of query: 167
effective length of database: 116,782
effective search space: 19502594
effective search space used: 19502594
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)