GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001490-TA|BGIBMGA001490-PA|IPR001179|Peptidylprolyl
isomerase, FKBP-type
         (402 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   2.9  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   6.8  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    22   6.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   6.8  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    22   6.8  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   9.0  

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
          protein 17 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)

Query: 47 KNFLVCTLQKNKC 59
          KN+L C L+K KC
Sbjct: 40 KNYLDCILEKGKC 52


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
          protein 11 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 47 KNFLVCTLQKNKC 59
          KN++ C L+K KC
Sbjct: 44 KNYVNCLLEKGKC 56


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
          protein 2 protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)

Query: 48 NFLVCTLQKNKCIQVPLDLYFKTGDSIAFLTN-GKCNVH 85
          N+L C L+K KC +    L     D  A +T   KCN H
Sbjct: 42 NYLQCLLKKGKCNEEAAILRDVIPD--ALITGCRKCNDH 78


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 343 FRLGAKEVISGWDVGVSGMKVGGKRKII 370
           FR G + V +G +  +S MKV  + K+I
Sbjct: 208 FRAGLERVQNGENQWISVMKVNKQPKVI 235


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
          protein protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)

Query: 48 NFLVCTLQKNKCIQVPLDLYFKTGDSIAFLTN-GKCNVH 85
          N+L C L+K KC +    L     D  A +T   KCN H
Sbjct: 42 NYLQCLLKKGKCNEEAAILRDVIPD--ALITGCRKCNDH 78


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
          protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 47 KNFLVCTLQKNKC 59
          +N+L C L K KC
Sbjct: 39 RNYLDCVLDKGKC 51


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.136    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,993
Number of Sequences: 317
Number of extensions: 2161
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 6
length of query: 402
length of database: 114,650
effective HSP length: 58
effective length of query: 344
effective length of database: 96,264
effective search space: 33114816
effective search space used: 33114816
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)