Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001490-TA|BGIBMGA001490-PA|IPR001179|Peptidylprolyl
isomerase, FKBP-type
(402 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 107 1e-23
09_02_0288 + 6936867-6936879,6936965-6937038,6937445-6937588,693... 93 4e-19
04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248... 89 4e-18
09_01_0022 + 426649-426663,427170-427420,427479-427577,428321-42... 87 3e-17
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 87 3e-17
02_03_0280 - 17256524-17256733,17256838-17256958,17257318-172574... 86 4e-17
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 83 3e-16
06_03_1031 - 27018871-27018916,27018987-27019110,27019251-270193... 83 5e-16
01_06_1316 + 36245368-36245507,36247229-36247315,36248334-362484... 81 1e-15
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080... 81 2e-15
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 75 1e-13
02_05_0823 - 32036445-32036546,32036867-32036919,32037513-320375... 70 4e-12
08_02_1436 + 27083698-27084111,27084333-27084416,27084502-270845... 69 9e-12
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475... 63 3e-10
03_05_0864 - 28362146-28362500,28362585-28362629,28362727-28363085 59 5e-09
09_01_0020 + 413723-413738,413867-413934,414849-415144,415275-41... 59 7e-09
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 52 1e-06
02_01_0126 + 924691-924839,925103-925220,925303-925389,925482-92... 46 4e-05
01_05_0366 + 21419270-21419312,21420372-21420458,21420625-214209... 45 9e-05
12_01_0295 + 2235209-2235263,2236182-2236361,2236478-2236567,223... 44 3e-04
07_01_0246 + 1809762-1809803,1810383-1810557,1810678-1810763,181... 41 0.002
05_07_0358 - 29534744-29534974,29535075-29535145,29535894-29535906 40 0.005
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 39 0.006
01_05_0361 + 21377080-21377281,21378619-21378705,21379862-213801... 39 0.006
02_01_0512 - 3711475-3711600,3711903-3712019,3712099-3712176,371... 38 0.011
01_06_1741 + 39581656-39581680,39582627-39582697,39582779-395828... 38 0.014
11_01_0294 + 2212807-2212876,2213664-2213843,2214505-2214594,221... 38 0.019
01_05_0367 + 21427130-21427136,21427733-21427822,21427927-214281... 38 0.019
03_03_0065 + 14192725-14192813,14193004-14193088,14193971-141940... 32 0.94
02_01_0749 - 5568149-5568226,5568396-5568466,5568602-5568647,556... 32 0.94
01_05_0359 + 21350580-21350829,21350990-21351064,21351156-213512... 31 2.2
08_02_1154 - 24727668-24728275,24728503-24728844,24730216-24731119 30 3.8
01_05_0372 + 21541220-21541457,21541832-21541912,21542027-215420... 29 5.0
01_01_0261 + 2119519-2121033 29 6.6
01_06_1742 - 39585879-39585994,39586089-39586238,39586288-395863... 29 8.7
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 107 bits (258), Expect = 1e-23
Identities = 55/113 (48%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
Query: 290 EKKALSGGVQIEDLKLG--NGPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGA 347
+ + G+ IE++++G +G A PGK V V Y G+LK N +FD+ + F FRLG
Sbjct: 483 QTRTFGNGMIIEEIEMGKPDGKKASPGKKVSVKYIGKLK-NGTIFDSTVGRRAFDFRLGI 541
Query: 348 KEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKN 400
EVI GWD+G++GM+VG KR++ PP M YG K P IP NSTLVF+VEL N
Sbjct: 542 GEVIKGWDIGINGMRVGDKRRLTIPPSMGYGNKRMGP-IPQNSTLVFDVELVN 593
>09_02_0288 +
6936867-6936879,6936965-6937038,6937445-6937588,
6937754-6937958,6938552-6938852,6938952-6939150,
6939393-6939477,6939554-6939595,6939676-6939724,
6939872-6939941,6940296-6940301
Length = 395
Score = 93.1 bits (221), Expect = 4e-19
Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 4/112 (3%)
Query: 292 KALSGGVQIEDLKLGN--GPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKE 349
+ L G+ +EDL GN +A G V + Y G L Q+ K+ ++ + +KF+LGA +
Sbjct: 286 RTLEDGLIVEDLSTGNLDAEMASNGSKVSIKYVGTL-QDGKIVESNVGEKPYKFKLGAGK 344
Query: 350 VISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401
VI GWDVG+ GM+VG KRK+ PP M YG+K V P NS++++E+EL V
Sbjct: 345 VIRGWDVGICGMRVGDKRKLTVPPAMCYGSKAIGEV-PKNSSIIYEIELVKV 395
>04_03_0532 -
16824394-16824447,16824545-16824665,16824748-16824875,
16825457-16825603,16825682-16825807,16825895-16826160,
16826259-16826453,16826577-16826657,16826756-16826830,
16827270-16827530,16827633-16827719,16827844-16828060
Length = 585
Score = 89.4 bits (212), Expect = 4e-18
Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 289 KEKKALSGGVQIEDLKLGNG-PVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGA 347
+EK+ G++ LK G G + G V V+Y G L K + +G FKF LG
Sbjct: 42 EEKEIGKQGLRKRLLKEGEGWDRPESGDEVQVHYTGTLLDGTKFDSSRDRGTPFKFSLGQ 101
Query: 348 KEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVEL 398
EVI GWD G+ MK G + PP +AYG GSPP IPPN+TL F+VEL
Sbjct: 102 GEVIKGWDEGIKTMKKGEQAVFTVPPELAYGEAGSPPAIPPNATLRFDVEL 152
Score = 44.4 bits (100), Expect = 2e-04
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 303 LKLGNGPVAKP--GKVVMVYYEGRLKQNNKMFDNCLKGPG-FKFRLGAKEVISGWDVGVS 359
LK G G +P G VV V + G+L+ G F+FR ++VI G D V
Sbjct: 289 LKEGEG-YERPNDGAVVRVRFIGKLEDGTVFSKKGHDGDEPFEFRTDEEQVIEGLDRTVV 347
Query: 360 GMKVGGKRKIICPPGMAYGA---KGSPPVIPPNSTLVFEVEL 398
MK G + PP A+G+ K V+P NST+ +EVEL
Sbjct: 348 TMKKGEVALVRLPPQHAFGSTETKQDLAVVPANSTVWYEVEL 389
Score = 33.9 bits (74), Expect = 0.23
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Query: 317 VMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMA 376
V+V YE RL+ + K G +F + V MK G K + P
Sbjct: 187 VLVKYEARLEDGTVVS----KSDGVEFAVKDGYFCPALSKAVKTMKKGEKVLLTVKPQYG 242
Query: 377 YGAKGSPP-----VIPPNSTLVFEVELKNVK 402
+G +G P +PPN+TL ++EL + K
Sbjct: 243 FGEQGKPASGAEAAVPPNATLYVDLELLSWK 273
>09_01_0022 +
426649-426663,427170-427420,427479-427577,428321-428473,
428893-429051,429146-429287,429460-429544,429629-429670,
429784-429832,430540-430639,431240-431287
Length = 380
Score = 86.6 bits (205), Expect = 3e-17
Identities = 51/113 (45%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Query: 292 KALSGGVQIEDLKLGN--GPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKE 349
+ L G+ IEDL GN +A GK V V Y L N D + KF+LGA E
Sbjct: 247 RVLDSGMTIEDLAKGNVGAKIASCGKKVYVKYVCMLS-NGDTVDPTGESSTCKFKLGAGE 305
Query: 350 VISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNVK 402
VISGWD+G+ GM+VGG R++ PP + YG G IPPN+ L F++EL VK
Sbjct: 306 VISGWDLGIDGMRVGGIRRLGIPPHLGYGDVGRGN-IPPNAWLNFDIELLKVK 357
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 86.6 bits (205), Expect = 3e-17
Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 289 KEKKALSGGVQIEDLKLGNG-PVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGA 347
+EK+ G++ + LK G G + G V V+Y G L K + +G FKF+LG
Sbjct: 38 EEKEIGKQGLRKKLLKEGEGWETPEVGDEVEVHYTGTLLDGKKFDSSRDRGTPFKFKLGQ 97
Query: 348 KEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVEL 398
+VI GWD+G+ MK G PP +AYG GSPP IP ++TL F+VEL
Sbjct: 98 GQVIKGWDLGIKTMKKGENAVFTIPPDLAYGESGSPPTIPASATLQFDVEL 148
Score = 50.4 bits (115), Expect = 2e-06
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 314 GKVVMVYYEGRLKQNNKMFDNCLKGPG-FKFRLGAKEVISGWDVGVSGMKVGGKRKIICP 372
G VV V G+L+ P F+F+ +EVI G D V MK G + P
Sbjct: 302 GAVVKVKITGKLQDGTIFTKKGHDEPEPFEFKTDEEEVIDGIDRAVLNMKNGEVALVTIP 361
Query: 373 PGMAYG---AKGSPPVIPPNSTLVFEVEL 398
P A+G +K V+PPNST+++EVEL
Sbjct: 362 PEYAFGSTESKQDLAVVPPNSTVIYEVEL 390
>02_03_0280 -
17256524-17256733,17256838-17256958,17257318-17257445,
17257603-17257671,17257757-17257882,17257970-17258235,
17258341-17258535,17258614-17258694,17258729-17258851,
17258941-17259201,17260044-17260130,17260260-17260578
Length = 661
Score = 86.2 bits (204), Expect = 4e-17
Identities = 47/111 (42%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 289 KEKKALSGGVQIEDLKLGNG-PVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGA 347
+EK+ G++ + +K G G G V V+Y G L K + + FKF LG
Sbjct: 76 EEKEIGKEGLRKKLVKEGEGWERPDAGDEVQVHYTGTLLDGTKFDSSRDRDAPFKFTLGQ 135
Query: 348 KEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVEL 398
+VI GWD+G+ MK G PP +AYG GSPPVIPPN+TL F+VEL
Sbjct: 136 GQVIKGWDLGIKTMKKGENAIFTIPPELAYGEDGSPPVIPPNATLQFDVEL 186
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 341 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGA---KGSPPVIPPNSTLVFEVE 397
F+F+ +V+ G D V MK G + PP A+G+ + V+PPNST+ +EVE
Sbjct: 379 FEFKTDEDQVVEGLDKAVLSMKKGEVALVTIPPEYAFGSDETRQDLSVVPPNSTVYYEVE 438
Query: 398 L 398
L
Sbjct: 439 L 439
>09_04_0633 -
19123930-19124009,19124240-19124344,19124453-19124543,
19124647-19124709,19126318-19126368,19126878-19126962,
19127102-19127283,19128493-19128582
Length = 248
Score = 83.4 bits (197), Expect = 3e-16
Identities = 39/88 (44%), Positives = 52/88 (59%)
Query: 311 AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKII 370
A G V V+Y G+L + +G +F LG +VI GWD G+ GM VG KRK+
Sbjct: 146 AHKGDRVKVHYRGKLTDGTDFDSSYERGDPIEFELGTGQVIKGWDQGILGMCVGEKRKLK 205
Query: 371 CPPGMAYGAKGSPPVIPPNSTLVFEVEL 398
P + YGA+GSPP IP +TL+F+ EL
Sbjct: 206 IPSKLGYGAQGSPPTIPGGATLIFDTEL 233
>06_03_1031 -
27018871-27018916,27018987-27019110,27019251-27019311,
27019466-27019558,27019663-27020016
Length = 225
Score = 82.6 bits (195), Expect = 5e-16
Identities = 50/120 (41%), Positives = 70/120 (58%), Gaps = 16/120 (13%)
Query: 297 GVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCLK-GPGFKFRLGAKEVISGWD 355
G+ D +G G A+ G+++ +Y GRL ++ +FD+ K G FR+G EVI GWD
Sbjct: 97 GLAFCDRVVGTGAAAEQGQLIKAHYTGRL-EDGTVFDSSYKRGKPLTFRVGVGEVIKGWD 155
Query: 356 VGVSG------MKVGGKRKIICPPGMAYGAKGS-----PP---VIPPNSTLVFEVELKNV 401
G+ G M GGKR + PP +AYGA+G+ P VIPPNSTL+F+VE+ V
Sbjct: 156 QGIVGGEGIPPMLAGGKRSLRLPPELAYGARGAGCRGWEPTSCVIPPNSTLLFDVEMFRV 215
>01_06_1316 +
36245368-36245507,36247229-36247315,36248334-36248439,
36249028-36249204,36249296-36249375,36249432-36249440,
36249474-36249566,36249788-36249947
Length = 283
Score = 81.4 bits (192), Expect = 1e-15
Identities = 42/84 (50%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 319 VYYEGRLKQNNKMFDNCLKGPG-FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAY 377
V+YEG L +N ++FD + F F +G VI WD+ V MKVG KI C P AY
Sbjct: 126 VHYEGTLAENGEVFDTTHEDNSVFSFEIGEGTVIKAWDIAVKTMKVGEVAKITCKPEYAY 185
Query: 378 GAKGSPPVIPP---NSTLVFEVEL 398
GA GSPP IPP ++TL FEVEL
Sbjct: 186 GAAGSPPEIPPEVQSATLTFEVEL 209
>01_06_1791 -
39907362-39907453,39907682-39907753,39907941-39908045,
39908212-39908302,39908787-39908849,39909448-39909497,
39909632-39909716
Length = 185
Score = 81.0 bits (191), Expect = 2e-15
Identities = 39/88 (44%), Positives = 52/88 (59%)
Query: 311 AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKII 370
A G + V+Y G L + + +G F+F LG +VI GWD G+ GM VG KRK+
Sbjct: 55 AHKGDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLK 114
Query: 371 CPPGMAYGAKGSPPVIPPNSTLVFEVEL 398
P M YG +GSPP IP +TL+F+ EL
Sbjct: 115 IPAKMGYGERGSPPKIPGGATLIFDTEL 142
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 74.5 bits (175), Expect = 1e-13
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 316 VVMVYYEGRLKQNNKMFDNCLKGPG-FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPG 374
+V V+YEG L +N ++FD + F F +G VI WD+ + MKVG KI C P
Sbjct: 34 LVDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKVGEVAKITCKPE 93
Query: 375 MAYGAKGSPPVIPPNSTLVFEVELK 399
AYG+ GSPP IPP S + + K
Sbjct: 94 YAYGSAGSPPEIPPKSVAISPMRCK 118
>02_05_0823 -
32036445-32036546,32036867-32036919,32037513-32037574,
32037804-32037837,32038144-32038231
Length = 112
Score = 69.7 bits (163), Expect = 4e-12
Identities = 46/102 (45%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 303 LKLGNGPVAKPGKVVMVYYEGRLKQNN--KMFDNCLKGPG---FKFRLGAKEVISGWDVG 357
LK G GP G+ V V+ G K N+ K F + K G F F +G VI GWD G
Sbjct: 8 LKAGTGPKPVKGQKVTVHCTGFGKDNDLAKKFWST-KDAGQEPFSFNIGQGSVIKGWDEG 66
Query: 358 VSGMKVGGKRKIICPPGMAYGAKGSPP-VIPPNSTLVFEVEL 398
V M+VG +I C P AYGA G P I PNS LVFE+E+
Sbjct: 67 VMTMQVGEVARIQCTPDYAYGASGFPAWGIRPNSVLVFEIEV 108
>08_02_1436 +
27083698-27084111,27084333-27084416,27084502-27084551,
27084676-27084724,27085471-27085545,27085724-27085837
Length = 261
Score = 68.5 bits (160), Expect = 9e-12
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 6/107 (5%)
Query: 297 GVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCL-KGPGFKFRLGAKEVISGWD 355
G+Q +D+K+G GP G V Y + N ++FD+ L KG + FR+G+ +VI G D
Sbjct: 147 GLQYKDIKVGEGPSPPIGFQVAANYVA-MVPNGQIFDSSLEKGQPYIFRVGSGQVIKGLD 205
Query: 356 VGVSGMKVGGKRKIICPPGMAY--GAKGSP--PVIPPNSTLVFEVEL 398
G+ MKVGG R++ P +A+ G +P P + P+S ++F+V L
Sbjct: 206 EGILSMKVGGLRRLYIPGPLAFPKGLTSAPGRPRVAPSSPVMFDVNL 252
>07_01_0635 +
4753919-4754090,4754200-4754258,4754377-4754432,
4754698-4754842,4755506-4755580,4755844-4755933,
4756218-4756295,4757879-4758376,4758512-4758997
Length = 552
Score = 63.3 bits (147), Expect = 3e-10
Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 302 DLKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPG----FKFRLGAKE---VISGW 354
D+ +G+G A G V V+Y + K M G G + F +G E V+ G
Sbjct: 128 DITVGSGLKAVKGSRVAVHYVAKWKGITFMTSRQGLGVGGGTPYGFDIGNSERGNVLKGL 187
Query: 355 DVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTL 392
D+GV GMKVGG+R II PP +AYG KG IPPN+T+
Sbjct: 188 DLGVEGMKVGGQRLIIVPPELAYGKKGVQE-IPPNATI 224
>03_05_0864 - 28362146-28362500,28362585-28362629,28362727-28363085
Length = 252
Score = 59.3 bits (137), Expect = 5e-09
Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 286 IEKKEKKALSGGVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGP-GFKFR 344
+E++++ L G++ ++++G G V +PG +V++ +GR+ D G
Sbjct: 122 VEQEQEVVLPNGIRYYEMRVGGGDVPRPGDLVVIDLKGRVTGGEAFVDTFGDGKRPLALV 181
Query: 345 LGAKEVISGWDVGVS----GMKVGGKRKIICPPGMAYGAKG-----SPPVIPPNSTLVFE 395
+G++ G GV M+ GGKR+++ PP + +G G + +PP +TL +
Sbjct: 182 MGSRPYTRGMCEGVEYVLRSMRAGGKRRVVVPPALGFGDDGADFGDAAAQVPPGATLEYV 241
Query: 396 VELKNV 401
VE+ V
Sbjct: 242 VEVDKV 247
>09_01_0020 +
413723-413738,413867-413934,414849-415144,415275-415400,
415484-415566,416514-416628,416755-416847,416963-417021,
417609-417684,417812-417901,418050-418202,418294-418480,
418752-418839,419077-419125,419233-419329
Length = 531
Score = 58.8 bits (136), Expect = 7e-09
Identities = 44/113 (38%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 292 KALSGGVQIEDLKLGNGP--VAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKE 349
+ L G+++E L GN VA GK V V Y GRL + L FRLG
Sbjct: 428 EVLDNGIKVEHLVEGNAKAKVASKGKQVCVRYCGRLINGEVIDPTNLDDDTHTFRLG--- 484
Query: 350 VISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNVK 402
M+VGGKR++ PP YG +P IP NS LV+EVEL VK
Sbjct: 485 -----------MRVGGKRRLTIPPAQGYGDVATPK-IPANSWLVYEVELLEVK 525
Score = 35.1 bits (77), Expect = 0.10
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 2 FWGLIMEPNKRYTQ-VVEKPFHISQAAMDTSTGDNEPCQVMVVVDGKNFLVCTLQKNKCI 60
FWGL ++P + YT I+QA + + Q D + +C L +
Sbjct: 4 FWGLELKPGEAYTHHSAPARLRITQAVLGSCDQGWTTLQCDTN-DRETVRLCVLNPGLAV 62
Query: 61 QVPLDLYFKTGDSIAFLTNGKCNVHLTGY 89
L+L + +++ +G+ ++HL+GY
Sbjct: 63 ACHLELELQKDENVLLSVDGQNSIHLSGY 91
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 51.6 bits (118), Expect = 1e-06
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 290 EKKALSGGVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCLK-GPGFKFRLGAK 348
+ + G+ D+++G G G+++ V+Y R + +FD+ K G RLGA
Sbjct: 106 DMNVVKSGLGYCDVEVGTGAQPPRGQLINVHYTARFT-DGIVFDSTYKRGRPLTMRLGAG 164
Query: 349 EVISGWDVGVSG------MKVGGKRKIICPPGMAYG 378
+++ G + G+SG M VGGKRK++ P +AYG
Sbjct: 165 KILRGLEQGISGGGGVPPMLVGGKRKLMIPATLAYG 200
>02_01_0126 +
924691-924839,925103-925220,925303-925389,925482-925631,
925750-925809,925914-925976
Length = 208
Score = 46.4 bits (105), Expect = 4e-05
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 360 GMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401
GMKVGGKR++I PP + YG KG IPP++ ++EL V
Sbjct: 162 GMKVGGKRRVIVPPELGYGKKGMNE-IPPDAPFELDIELLEV 202
>01_05_0366 +
21419270-21419312,21420372-21420458,21420625-21420900,
21421560-21421634,21421736-21421816,21422117-21422308,
21422756-21422772
Length = 256
Score = 45.2 bits (102), Expect = 9e-05
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 315 KVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPG 374
K+ V++ G L + + +F LG ++V+ G+++ VS M+ G K P
Sbjct: 11 KINGVHFTGELVDGTQFVSSRENDIPERFILGQEDVMHGFNLAVSSMQPGEKAIFTIPSA 70
Query: 375 MAYGAKGSPPV----IPPNSTLVFEVEL 398
+ GSP IPPN TL FE+EL
Sbjct: 71 LTMTKAGSPASIPSNIPPNQTLRFEIEL 98
>12_01_0295 +
2235209-2235263,2236182-2236361,2236478-2236567,
2236947-2237131,2237200-2237358,2237437-2237589,
2237938-2238264
Length = 382
Score = 43.6 bits (98), Expect = 3e-04
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 285 PIEKKEKKALSGGVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNNKMF-DNCLKGPGFKF 343
P+ + + L+ V+ + +K G+G V+Y ++ ++ F D + +
Sbjct: 45 PVVTSDMEVLNDKVKKQVIKEGHGKKPSRFATCFVHYRAWVQGSSHKFEDTWQEQHSIEL 104
Query: 344 RLGA-KEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKG--SPPVIPPNSTLVFEVEL 398
LG K+ ++G +GVS M+ G + + + YG +G S P +PP + LV+EVEL
Sbjct: 105 VLGKEKKEMTGLGIGVSNMRSGERALLHVNWELGYGKEGSFSFPNVPPMADLVYEVEL 162
>07_01_0246 +
1809762-1809803,1810383-1810557,1810678-1810763,
1810871-1810921,1811003-1811146,1811299-1811343,
1811578-1811633,1811744-1811819,1811908-1812006
Length = 257
Score = 41.1 bits (92), Expect = 0.002
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 321 YEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAY 377
+E R K F+ K FKF++G+ +VI ++ +S M GG R+II PP + Y
Sbjct: 154 FEARNKTKGGSFEGGDKD-FFKFKIGSGQVIPAFEEAISDMAPGGVRRIIVPPDLGY 209
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 297 GVQIEDLKLGNGPVAKPGKVVMVYY 321
G+Q +DL++G+GP K G+ V+ Y+
Sbjct: 97 GLQYKDLRVGDGPSPKKGETVVCYH 121
>05_07_0358 -
29534744-29534974,29535075-29535145,29535894-29535906
Length = 104
Score = 39.5 bits (88), Expect = 0.005
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 2 FWGLIMEPNK--RYTQVVEKPFHISQAAMDTSTGDNEPCQVMVVVDGKNFLVCTLQKNKC 59
FWGL ++P + + E+ H+SQAA+ S ++ + V D + ++ TL +K
Sbjct: 3 FWGLEVKPGQTVKCEPEDERFLHLSQAALGESKKGSDNAVMYVKTDDQKLVIGTLSADKF 62
Query: 60 IQVPLDLYFKTGDSIAFLTNGKCNVHLTGY 89
Q+ DL F ++ T+ +V +GY
Sbjct: 63 PQIQFDLVFDKEFELSH-TSKTASVFFSGY 91
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 39.1 bits (87), Expect = 0.006
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 15/77 (19%)
Query: 297 GVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDV 356
G+ ED+K+G G K G+ V+ +Y G ++ + D+ I G++
Sbjct: 63 GLLYEDIKVGTGNSPKDGQQVIFHYVG-YNESGRRIDS--------------TYIQGFEE 107
Query: 357 GVSGMKVGGKRKIICPP 373
G+ MK GGKR+II PP
Sbjct: 108 GIRDMKPGGKRRIIIPP 124
>01_05_0361 +
21377080-21377281,21378619-21378705,21379862-21380134,
21380304-21380378,21380470-21380550,21380837-21381034,
21381145-21381234,21381310-21381467,21381619-21381741,
21381891-21382034,21382175-21382285,21382583-21382624,
21383043-21383261,21385319-21385627
Length = 703
Score = 39.1 bits (87), Expect = 0.006
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 338 GPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPV-----IPPNSTL 392
G F LG + V+ G+ + VS M+ G K PP +A G K PV I PN L
Sbjct: 87 GVPLTFILGQENVMRGFSMAVSSMQAGEKAVFTIPPELA-GTKSRCPVDIPGNIAPNEAL 145
Query: 393 VFEVEL 398
F++EL
Sbjct: 146 RFDIEL 151
>02_01_0512 -
3711475-3711600,3711903-3712019,3712099-3712176,
3712714-3712836,3713125-3713400
Length = 239
Score = 38.3 bits (85), Expect = 0.011
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 350 VISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPN 389
VI G + V M+VGG R++I PP Y P IPPN
Sbjct: 160 VIPGIEAAVKSMRVGGLRRVIIPPSQGYQNTSQEP-IPPN 198
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 295 SGGVQIEDLKLGNGPVAKPGKVVMVYYEGRL 325
SGGV+ DL+ G G V G V ++Y GRL
Sbjct: 71 SGGVKALDLREGPGEVPADGDQVAIHYYGRL 101
>01_06_1741 +
39581656-39581680,39582627-39582697,39582779-39582898,
39583034-39583094,39583186-39583242,39583413-39583600,
39583747-39583818,39583953-39584180
Length = 273
Score = 37.9 bits (84), Expect = 0.014
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 FWGLIMEPNKRYTQVVEKP----FHISQAAMDTSTGDNEPCQVMVVVDGKNFLVCTLQKN 57
FWG+ + P + T + + P +HISQ A++ NE QV VDGK L+ TL
Sbjct: 7 FWGVAVRPGE--TVMCDPPGEFYYHISQIALEPGEL-NENVQVFGEVDGKRILLGTLSVE 63
Query: 58 KCIQVPLDL-YFKTGDSIAFLTN 79
Q+ +DL YF +A T+
Sbjct: 64 HRPQLSIDLEYFSLTFCLAVCTS 86
>11_01_0294 +
2212807-2212876,2213664-2213843,2214505-2214594,
2215054-2215238,2215399-2215521,2215593-2215745,
2216090-2216416
Length = 375
Score = 37.5 bits (83), Expect = 0.019
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Query: 285 PIEKKEKKALSGGVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQN-NKMFDNCLKGPGFKF 343
P+ + L V+ + +K G+G ++Y ++ + +K D + +
Sbjct: 50 PVVSSNMEVLHDKVKKQVIKEGHGKKPSKFATCFLHYRAWVQGSLHKFEDTWQEQHPIEL 109
Query: 344 RLGA-KEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKG--SPPVIPPNSTLVFEVEL 398
+G K+ +SG +GV M+ G + + + YG +G S P +PP + L++EVEL
Sbjct: 110 VIGKEKKQMSGLGIGVGNMRSGERALLHVGWELGYGKEGSFSFPNVPPMADLLYEVEL 167
>01_05_0367 +
21427130-21427136,21427733-21427822,21427927-21428105,
21429115-21429432,21430537-21430563
Length = 206
Score = 37.5 bits (83), Expect = 0.019
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 323 GRLKQNNKMFDNCLKGPG--FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAK 380
G+L Q+ +FD G F+F + +VI G D V M+ G + PP A+ A
Sbjct: 7 GKL-QDGTVFDRRGYGDDEPFEFVVDEGQVIDGLDESVMTMEEGEVAEFTIPPQHAFDAV 65
Query: 381 GSP----PVIPPNSTLVFEVELKNV 401
GS +P N+T+V+++EL +V
Sbjct: 66 GSDQHQFAFVPRNATVVYKIELLSV 90
>03_03_0065 +
14192725-14192813,14193004-14193088,14193971-14194040,
14194730-14194827,14194931-14195101,14196192-14196224,
14196762-14196820,14197143-14197190,14197399-14197480,
14198317-14198475,14199036-14199093,14199801-14199949,
14200403-14200503,14200574-14200643,14201088-14201147,
14201883-14201939,14202247-14202315,14202485-14202562,
14202996-14203097,14203203-14203274,14203361-14203648
Length = 665
Score = 31.9 bits (69), Expect = 0.94
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 316 VVMVYYEGRLKQNNK--MFDNCLKGPG--FKFRLGAKEVISGWDVGVSGMKVGGKRKIIC 371
++ V+Y+G L K +D + G +F G V G+++ V M G K + C
Sbjct: 330 LLRVHYKGMLLDEPKSIFYDTRVDNHGEPLEFCSGEGLVPEGFEMCVRLMLPGEKSIVTC 389
Query: 372 PPGMAYGA-KGSPPVIPPNSTLVFEVEL 398
PP AY P +P + + +E+EL
Sbjct: 390 PPDFAYDKFPRLPANVPEGAHVQWEIEL 417
>02_01_0749 -
5568149-5568226,5568396-5568466,5568602-5568647,
5568800-5568843,5569267-5569301,5569414-5569520
Length = 126
Score = 31.9 bits (69), Expect = 0.94
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 347 AKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPV 385
A +I G + GMK GGKR+ + PP + Y + P+
Sbjct: 60 AARMIRGLKDVIVGMKTGGKRRALIPPQVGYTDESLQPI 98
>01_05_0359 +
21350580-21350829,21350990-21351064,21351156-21351236,
21352633-21352830,21352930-21353019,21353096-21353253,
21353350-21353472,21354989-21355096,21355530-21355826
Length = 459
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 356 VGVSGMKVGGKRKIICPPGMAYGAKGSPPV-----IPPNSTLVFEVEL 398
+ VS M+ G K PP +A G K P +PPN L F+VEL
Sbjct: 1 MAVSSMQAGEKAVFTIPPELA-GTKSRCPADIPANLPPNQALQFDVEL 47
>08_02_1154 - 24727668-24728275,24728503-24728844,24730216-24731119
Length = 617
Score = 29.9 bits (64), Expect = 3.8
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Query: 296 GGVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCLK-GPGFKFRLGAKEVISGW 354
G VQ+ D+ + NG V + + Y+GR N GP F G+ V+ G
Sbjct: 85 GTVQVLDISIPNGTVRINSGRINLEYDGRGSANGTWGGGLPDGGPFFLSESGSSLVLMGH 144
Query: 355 DVGVSGMKVGGKR-----KIICP--PGMAYG 378
D V +GG +ICP P +G
Sbjct: 145 DSQVDVWGLGGDNPIASCSVICPRIPSAIFG 175
>01_05_0372 +
21541220-21541457,21541832-21541912,21542027-21542092,
21543050-21543178,21544619-21544674,21545451-21545732
Length = 283
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 361 MKVGGKRKIICPPGMAYGAKGSPPVIP----PNSTLVFEVEL 398
M+ G + PP +A GSP IP P TL FE+EL
Sbjct: 1 MRPGERAIFTIPPKLAITKSGSPASIPSSIPPEQTLRFEIEL 42
>01_01_0261 + 2119519-2121033
Length = 504
Score = 29.1 bits (62), Expect = 6.6
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Query: 303 LKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCLK-GPGFKFRLGAKEVISG-----WDV 356
L LG GP++ P ++ + L + + L+ G + A + S + V
Sbjct: 293 LALGGGPLSFPSQISATTFSYCLVDRDSPSSSTLQFGDAADAEVTAPLIRSPRTSTFYYV 352
Query: 357 GVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVE 397
G+SG+ VGG+ I P A + G+ VI + T V ++
Sbjct: 353 GLSGLSVGGQILSIPPSAFAMDSTGAGGVIVDSGTAVTRLQ 393
>01_06_1742 - 39585879-39585994,39586089-39586238,39586288-39586375,
39586479-39586640,39586753-39586877,39586992-39587030,
39587290-39587476,39587643-39587713,39589371-39589564,
39589656-39589767,39589899-39590082,39590177-39590503,
39590780-39591061,39591148-39591621,39591730-39591813,
39591850-39591939,39592024-39592247,39592503-39592600,
39592679-39593169,39593249-39593520,39594266-39594522,
39594672-39594890,39595007-39595167,39595249-39595441,
39595528-39595633,39595947-39596121,39596404-39596556,
39596663-39596794,39597120-39597184,39597754-39597819,
39598433-39598511,39598587-39598767,39598864-39598976
Length = 1889
Score = 28.7 bits (61), Expect = 8.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 4 GLIMEPNKRYTQVVEKP--FHISQAAM-DTSTGDNEPCQVMVVVDGKNFLVCTLQKNKCI 60
G+ ++P K + V+ HISQ A+ +T +E V V VDGK ++ L
Sbjct: 1578 GIEVKPGKAVSFNVDDECVIHISQVALGETKKAGSENVVVSVKVDGKKTVIGNLSAKNHP 1637
Query: 61 QVPLDLY 67
Q DL+
Sbjct: 1638 QFMCDLF 1644
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.136 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,858,299
Number of Sequences: 37544
Number of extensions: 287223
Number of successful extensions: 562
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 499
Number of HSP's gapped (non-prelim): 50
length of query: 402
length of database: 14,793,348
effective HSP length: 84
effective length of query: 318
effective length of database: 11,639,652
effective search space: 3701409336
effective search space used: 3701409336
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -