BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001490-TA|BGIBMGA001490-PA|IPR001179|Peptidylprolyl isomerase, FKBP-type (402 letters) Database: celegans 27,539 sequences; 12,573,161 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 83 3e-16 AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 83 3e-16 Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 74 2e-13 Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 73 5e-13 AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 68 1e-11 Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 67 2e-11 U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 54 2e-07 U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 54 2e-07 AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 52 1e-06 AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-bindin... 34 0.16 U46753-11|AAM98048.1| 425|Caenorhabditis elegans Dishevelled re... 29 4.4 U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled re... 29 4.4 U97407-6|AAB52481.1| 751|Caenorhabditis elegans Hypothetical pr... 29 5.8 >U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. Length = 108 Score = 83.0 bits (196), Expect = 3e-16 Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 3/107 (2%) Query: 297 GVQIEDLKLGNGPVAKP--GKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGW 354 GV + L G+ V KP G+ V +Y L+ K+ + +G FKF++G EVI GW Sbjct: 2 GVDRQILVEGDN-VTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60 Query: 355 DVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401 D GV+ M VG K K+ + YG +G PP IP N+TLVFEVEL V Sbjct: 61 DQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELLGV 107 >AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical protein Y18D10A.19 protein. Length = 108 Score = 83.0 bits (196), Expect = 3e-16 Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 3/107 (2%) Query: 297 GVQIEDLKLGNGPVAKP--GKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGW 354 GV + L G+ V KP G+ V +Y L+ K+ + +G FKF++G EVI GW Sbjct: 2 GVDRQILVEGDN-VTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60 Query: 355 DVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401 D GV+ M VG K K+ + YG +G PP IP N+TLVFEVEL V Sbjct: 61 DQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELLGV 107 >Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical protein F31D4.3 protein. Length = 431 Score = 74.1 bits (174), Expect = 2e-13 Identities = 45/105 (42%), Positives = 54/105 (51%), Gaps = 3/105 (2%) Query: 296 GGVQIEDLKLGNGPVAKP--GKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISG 353 GGV K G G V KP G V V+Y G L+ K + +G F F LG VI G Sbjct: 14 GGVLKLIKKEGQG-VVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKG 72 Query: 354 WDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVEL 398 WD+GV+ M G + YG GSPP IP +TL+FEVEL Sbjct: 73 WDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVEL 117 >Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical protein F36H1.1 protein. Length = 139 Score = 72.5 bits (170), Expect = 5e-13 Identities = 34/91 (37%), Positives = 50/91 (54%) Query: 311 AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKII 370 ++ G + ++Y G L + + + F F LG VI GWD G+ M VG +R + Sbjct: 42 SRKGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILT 101 Query: 371 CPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401 PP + YG +G+PP IP NS L F+VEL + Sbjct: 102 IPPHLGYGERGAPPKIPGNSVLKFDVELMKI 132 >AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding protein family protein3 protein. Length = 261 Score = 67.7 bits (158), Expect = 1e-11 Identities = 32/91 (35%), Positives = 52/91 (57%) Query: 311 AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKII 370 A+ G + Y L+ + + + + F F++G+ +VI G D+ + GM G KRK++ Sbjct: 163 AQAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQVIKGMDIAMEGMCQGEKRKVV 222 Query: 371 CPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401 PP +AYG G PP IP NS L F++ L+ + Sbjct: 223 IPPELAYGENGRPPAIPGNSYLHFDLSLEKL 253 Score = 48.4 bits (110), Expect = 9e-06 Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 6/109 (5%) Query: 297 GVQIEDLK-LGNGPV---AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVIS 352 GV+IE +K +G+ ++ G + +Y+ K+ + N + P + F LG EVI Sbjct: 27 GVKIEIIKKIGDSKCKIKSESGDQLEQFYKLSDKEGKVIGSNFGQKP-YTFTLGKGEVIH 85 Query: 353 GWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401 G ++ + GM VG +RK+I PP + G V TL + VELK++ Sbjct: 86 GMEIAMEGMCVGEQRKVIIPPEQGFDEDGD-EVEGKGETLYYFVELKSI 133 >Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical protein ZC455.10 protein. Length = 259 Score = 67.3 bits (157), Expect = 2e-11 Identities = 34/103 (33%), Positives = 55/103 (53%) Query: 299 QIEDLKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGV 358 QI ++ A+ G + Y RL+ N + + + F FRL +EVI G D+ + Sbjct: 151 QIHKIEADKCKKAEAGDKIYQQYVLRLEDNTLVDSSYSRNAPFVFRLRNREVIDGMDIAM 210 Query: 359 SGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401 GM G +R+++ P YG++GSPP IP + L FE+ L+ + Sbjct: 211 DGMCEGERRRVVIPSEYGYGSQGSPPEIPGGARLFFEIVLEKL 253 Score = 41.1 bits (92), Expect = 0.001 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Query: 314 GKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPP 373 G VV YY+ ++ ++ N K P + F LG +VI G D + GM +G RK++ PP Sbjct: 52 GDVVDQYYKLTDEKGVEIGSNFGKKP-YTFTLGRNQVIPGMDRAMRGMCIGEIRKVVIPP 110 Query: 374 --GMAYGAKGSP 383 G A + G P Sbjct: 111 KLGFAKDSTGQP 122 >U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding protein family protein5, isoform a protein. Length = 264 Score = 54.0 bits (124), Expect = 2e-07 Identities = 26/91 (28%), Positives = 45/91 (49%) Query: 311 AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKII 370 +K G + Y L+ + + + F F+L EVI G D+ ++GM G +R+++ Sbjct: 168 SKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVV 227 Query: 371 CPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401 P YG G P IP + L F++ L+ + Sbjct: 228 IPSDFGYGDDGRAPAIPGKARLYFDITLEKL 258 Score = 46.0 bits (104), Expect = 5e-05 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 3/101 (2%) Query: 300 IEDLKLGNGPV-AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGV 358 I +K P+ ++ G V+ +Y+ K ++ N K P + F LG +VI G + + Sbjct: 35 IRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNKKP-YTFTLGKGQVIPGMERAM 93 Query: 359 SGMKVGGKRKIICPPGMAYGAKG-SPPVIPPNSTLVFEVEL 398 +GM G KRK++ P + +G KG I + TL + V+L Sbjct: 94 TGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQL 134 >U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding protein family protein5, isoform b protein. Length = 300 Score = 54.0 bits (124), Expect = 2e-07 Identities = 26/91 (28%), Positives = 45/91 (49%) Query: 311 AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKII 370 +K G + Y L+ + + + F F+L EVI G D+ ++GM G +R+++ Sbjct: 204 SKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVV 263 Query: 371 CPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401 P YG G P IP + L F++ L+ + Sbjct: 264 IPSDFGYGDDGRAPAIPGKARLYFDITLEKL 294 Score = 46.0 bits (104), Expect = 5e-05 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 3/101 (2%) Query: 300 IEDLKLGNGPV-AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGV 358 I +K P+ ++ G V+ +Y+ K ++ N K P + F LG +VI G + + Sbjct: 71 IRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNKKP-YTFTLGKGQVIPGMERAM 129 Query: 359 SGMKVGGKRKIICPPGMAYGAKG-SPPVIPPNSTLVFEVEL 398 +GM G KRK++ P + +G KG I + TL + V+L Sbjct: 130 TGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQL 170 >AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical protein Y18D10A.25 protein. Length = 290 Score = 51.6 bits (118), Expect = 1e-06 Identities = 33/104 (31%), Positives = 49/104 (47%) Query: 297 GVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDV 356 G+ + K GNG + + G++V Y E +L + N F++G EVI G D+ Sbjct: 85 GIHHQVDKAGNGVMPENGQLVQCYIEIKLADCYTSWSNYESQNPIIFKIGFGEVIPGLDI 144 Query: 357 GVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKN 400 G+ MKVG YG G +IP N++L +V L N Sbjct: 145 GIPKMKVGEIATFHVSGKYGYGRAGFRGLIPRNASLTCKVRLFN 188 Score = 46.4 bits (105), Expect = 4e-05 Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Query: 297 GVQIEDLKLG-NGPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWD 355 GV + L G N +K G+ V +Y L K+ + + FKF++G EVI GWD Sbjct: 198 GVDRQILVQGDNVTKSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGKGEVIKGWD 257 Query: 356 VGVSGMKVGGKRKIICPPGMAYGAKGSPPVIP 387 GV+ M V K K+ P + P IP Sbjct: 258 QGVAQMSVKEKSKLTIAPAFGFEKGKLPAGIP 289 >AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-binding protein family protein7 protein. Length = 318 Score = 34.3 bits (75), Expect = 0.16 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 3/94 (3%) Query: 311 AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKII 370 AK V +Y+ + N K++ GP +LG ++ G D G+ GM RK+ Sbjct: 90 AKRLDFVTFHYKVFTEDNKKVYQTYGTGP-VTIQLGTGMIMPGLDKGLKGMCAEELRKVR 148 Query: 371 CPPGMAYGAKGSPPVIPPN--STLVFEVELKNVK 402 P M+ +K PN + L+F +E+ +K Sbjct: 149 VPYRMSRKSKSKVWKNIPNDENWLIFNIEMVEIK 182 >U46753-11|AAM98048.1| 425|Caenorhabditis elegans Dishevelled related protein 1,isoform b protein. Length = 425 Score = 29.5 bits (63), Expect = 4.4 Identities = 10/31 (32%), Positives = 15/31 (48%) Query: 354 WDVGVSGMKVGGKRKIICPPGMAYGAKGSPP 384 W +G++GM G ++ PP G PP Sbjct: 372 WTIGMNGMSAGNGSSVMLPPPHLPGGMAGPP 402 >U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled related protein 1,isoform c protein. Length = 623 Score = 29.5 bits (63), Expect = 4.4 Identities = 10/31 (32%), Positives = 15/31 (48%) Query: 354 WDVGVSGMKVGGKRKIICPPGMAYGAKGSPP 384 W +G++GM G ++ PP G PP Sbjct: 504 WTIGMNGMSAGNGSSVMLPPPHLPGGMAGPP 534 >U97407-6|AAB52481.1| 751|Caenorhabditis elegans Hypothetical protein C34G6.2 protein. Length = 751 Score = 29.1 bits (62), Expect = 5.8 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 333 DNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYG 378 D C P ++ K+ I WD G K+KI PPGMA G Sbjct: 21 DPCASAPSEAAKIMCKQ-IHRWDDGARA--ASKKKKIALPPGMAKG 63 Database: celegans Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 12,573,161 Number of sequences in database: 27,539 Lambda K H 0.316 0.136 0.402 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,788,162 Number of Sequences: 27539 Number of extensions: 247211 Number of successful extensions: 399 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 382 Number of HSP's gapped (non-prelim): 18 length of query: 402 length of database: 12,573,161 effective HSP length: 83 effective length of query: 319 effective length of database: 10,287,424 effective search space: 3281688256 effective search space used: 3281688256 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 61 (28.7 bits)
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