Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001490-TA|BGIBMGA001490-PA|IPR001179|Peptidylprolyl
isomerase, FKBP-type
(402 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 83 3e-16
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 83 3e-16
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 74 2e-13
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 73 5e-13
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 68 1e-11
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 67 2e-11
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 54 2e-07
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 54 2e-07
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 52 1e-06
AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-bindin... 34 0.16
U46753-11|AAM98048.1| 425|Caenorhabditis elegans Dishevelled re... 29 4.4
U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled re... 29 4.4
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Hypothetical pr... 29 5.8
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 83.0 bits (196), Expect = 3e-16
Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 297 GVQIEDLKLGNGPVAKP--GKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGW 354
GV + L G+ V KP G+ V +Y L+ K+ + +G FKF++G EVI GW
Sbjct: 2 GVDRQILVEGDN-VTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60
Query: 355 DVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401
D GV+ M VG K K+ + YG +G PP IP N+TLVFEVEL V
Sbjct: 61 DQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELLGV 107
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 83.0 bits (196), Expect = 3e-16
Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 297 GVQIEDLKLGNGPVAKP--GKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGW 354
GV + L G+ V KP G+ V +Y L+ K+ + +G FKF++G EVI GW
Sbjct: 2 GVDRQILVEGDN-VTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60
Query: 355 DVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401
D GV+ M VG K K+ + YG +G PP IP N+TLVFEVEL V
Sbjct: 61 DQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELLGV 107
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 74.1 bits (174), Expect = 2e-13
Identities = 45/105 (42%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 296 GGVQIEDLKLGNGPVAKP--GKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISG 353
GGV K G G V KP G V V+Y G L+ K + +G F F LG VI G
Sbjct: 14 GGVLKLIKKEGQG-VVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKG 72
Query: 354 WDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVEL 398
WD+GV+ M G + YG GSPP IP +TL+FEVEL
Sbjct: 73 WDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVEL 117
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 72.5 bits (170), Expect = 5e-13
Identities = 34/91 (37%), Positives = 50/91 (54%)
Query: 311 AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKII 370
++ G + ++Y G L + + + F F LG VI GWD G+ M VG +R +
Sbjct: 42 SRKGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILT 101
Query: 371 CPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401
PP + YG +G+PP IP NS L F+VEL +
Sbjct: 102 IPPHLGYGERGAPPKIPGNSVLKFDVELMKI 132
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 67.7 bits (158), Expect = 1e-11
Identities = 32/91 (35%), Positives = 52/91 (57%)
Query: 311 AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKII 370
A+ G + Y L+ + + + + F F++G+ +VI G D+ + GM G KRK++
Sbjct: 163 AQAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQVIKGMDIAMEGMCQGEKRKVV 222
Query: 371 CPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401
PP +AYG G PP IP NS L F++ L+ +
Sbjct: 223 IPPELAYGENGRPPAIPGNSYLHFDLSLEKL 253
Score = 48.4 bits (110), Expect = 9e-06
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 297 GVQIEDLK-LGNGPV---AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVIS 352
GV+IE +K +G+ ++ G + +Y+ K+ + N + P + F LG EVI
Sbjct: 27 GVKIEIIKKIGDSKCKIKSESGDQLEQFYKLSDKEGKVIGSNFGQKP-YTFTLGKGEVIH 85
Query: 353 GWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401
G ++ + GM VG +RK+I PP + G V TL + VELK++
Sbjct: 86 GMEIAMEGMCVGEQRKVIIPPEQGFDEDGD-EVEGKGETLYYFVELKSI 133
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 67.3 bits (157), Expect = 2e-11
Identities = 34/103 (33%), Positives = 55/103 (53%)
Query: 299 QIEDLKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGV 358
QI ++ A+ G + Y RL+ N + + + F FRL +EVI G D+ +
Sbjct: 151 QIHKIEADKCKKAEAGDKIYQQYVLRLEDNTLVDSSYSRNAPFVFRLRNREVIDGMDIAM 210
Query: 359 SGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401
GM G +R+++ P YG++GSPP IP + L FE+ L+ +
Sbjct: 211 DGMCEGERRRVVIPSEYGYGSQGSPPEIPGGARLFFEIVLEKL 253
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 314 GKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPP 373
G VV YY+ ++ ++ N K P + F LG +VI G D + GM +G RK++ PP
Sbjct: 52 GDVVDQYYKLTDEKGVEIGSNFGKKP-YTFTLGRNQVIPGMDRAMRGMCIGEIRKVVIPP 110
Query: 374 --GMAYGAKGSP 383
G A + G P
Sbjct: 111 KLGFAKDSTGQP 122
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 54.0 bits (124), Expect = 2e-07
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 311 AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKII 370
+K G + Y L+ + + + F F+L EVI G D+ ++GM G +R+++
Sbjct: 168 SKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVV 227
Query: 371 CPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401
P YG G P IP + L F++ L+ +
Sbjct: 228 IPSDFGYGDDGRAPAIPGKARLYFDITLEKL 258
Score = 46.0 bits (104), Expect = 5e-05
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 300 IEDLKLGNGPV-AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGV 358
I +K P+ ++ G V+ +Y+ K ++ N K P + F LG +VI G + +
Sbjct: 35 IRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNKKP-YTFTLGKGQVIPGMERAM 93
Query: 359 SGMKVGGKRKIICPPGMAYGAKG-SPPVIPPNSTLVFEVEL 398
+GM G KRK++ P + +G KG I + TL + V+L
Sbjct: 94 TGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQL 134
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 54.0 bits (124), Expect = 2e-07
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 311 AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKII 370
+K G + Y L+ + + + F F+L EVI G D+ ++GM G +R+++
Sbjct: 204 SKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVV 263
Query: 371 CPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 401
P YG G P IP + L F++ L+ +
Sbjct: 264 IPSDFGYGDDGRAPAIPGKARLYFDITLEKL 294
Score = 46.0 bits (104), Expect = 5e-05
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 300 IEDLKLGNGPV-AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGV 358
I +K P+ ++ G V+ +Y+ K ++ N K P + F LG +VI G + +
Sbjct: 71 IRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNKKP-YTFTLGKGQVIPGMERAM 129
Query: 359 SGMKVGGKRKIICPPGMAYGAKG-SPPVIPPNSTLVFEVEL 398
+GM G KRK++ P + +G KG I + TL + V+L
Sbjct: 130 TGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQL 170
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/104 (31%), Positives = 49/104 (47%)
Query: 297 GVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDV 356
G+ + K GNG + + G++V Y E +L + N F++G EVI G D+
Sbjct: 85 GIHHQVDKAGNGVMPENGQLVQCYIEIKLADCYTSWSNYESQNPIIFKIGFGEVIPGLDI 144
Query: 357 GVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKN 400
G+ MKVG YG G +IP N++L +V L N
Sbjct: 145 GIPKMKVGEIATFHVSGKYGYGRAGFRGLIPRNASLTCKVRLFN 188
Score = 46.4 bits (105), Expect = 4e-05
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 297 GVQIEDLKLG-NGPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWD 355
GV + L G N +K G+ V +Y L K+ + + FKF++G EVI GWD
Sbjct: 198 GVDRQILVQGDNVTKSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGKGEVIKGWD 257
Query: 356 VGVSGMKVGGKRKIICPPGMAYGAKGSPPVIP 387
GV+ M V K K+ P + P IP
Sbjct: 258 QGVAQMSVKEKSKLTIAPAFGFEKGKLPAGIP 289
>AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-binding
protein family protein7 protein.
Length = 318
Score = 34.3 bits (75), Expect = 0.16
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 311 AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKII 370
AK V +Y+ + N K++ GP +LG ++ G D G+ GM RK+
Sbjct: 90 AKRLDFVTFHYKVFTEDNKKVYQTYGTGP-VTIQLGTGMIMPGLDKGLKGMCAEELRKVR 148
Query: 371 CPPGMAYGAKGSPPVIPPN--STLVFEVELKNVK 402
P M+ +K PN + L+F +E+ +K
Sbjct: 149 VPYRMSRKSKSKVWKNIPNDENWLIFNIEMVEIK 182
>U46753-11|AAM98048.1| 425|Caenorhabditis elegans Dishevelled
related protein 1,isoform b protein.
Length = 425
Score = 29.5 bits (63), Expect = 4.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 354 WDVGVSGMKVGGKRKIICPPGMAYGAKGSPP 384
W +G++GM G ++ PP G PP
Sbjct: 372 WTIGMNGMSAGNGSSVMLPPPHLPGGMAGPP 402
>U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled
related protein 1,isoform c protein.
Length = 623
Score = 29.5 bits (63), Expect = 4.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 354 WDVGVSGMKVGGKRKIICPPGMAYGAKGSPP 384
W +G++GM G ++ PP G PP
Sbjct: 504 WTIGMNGMSAGNGSSVMLPPPHLPGGMAGPP 534
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Hypothetical
protein C34G6.2 protein.
Length = 751
Score = 29.1 bits (62), Expect = 5.8
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 333 DNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYG 378
D C P ++ K+ I WD G K+KI PPGMA G
Sbjct: 21 DPCASAPSEAAKIMCKQ-IHRWDDGARA--ASKKKKIALPPGMAKG 63
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.136 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,788,162
Number of Sequences: 27539
Number of extensions: 247211
Number of successful extensions: 399
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 382
Number of HSP's gapped (non-prelim): 18
length of query: 402
length of database: 12,573,161
effective HSP length: 83
effective length of query: 319
effective length of database: 10,287,424
effective search space: 3281688256
effective search space used: 3281688256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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