BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001489-TA|BGIBMGA001489-PA|undefined (490 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1D4.01 ||SPAC1F3.11|sequence orphan|Schizosaccharomyces pomb... 32 0.21 SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 29 1.1 SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 29 1.1 SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 29 1.5 SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 29 1.9 SPAC3H1.09c |||vacuolar amino acid transporter |Schizosaccharomy... 28 3.4 SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 28 3.4 SPBC1D7.01 |||prefoldin subunit 1 |Schizosaccharomyces pombe|chr... 27 4.5 SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 27 4.5 SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16 |Schizosa... 27 4.5 SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 27 5.9 SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 27 7.8 >SPAC1D4.01 ||SPAC1F3.11|sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 285 Score = 31.9 bits (69), Expect = 0.21 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 1/132 (0%) Query: 228 VRPEMLNVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFV 287 + +LN KQ + G+++ N K+ + + S N+ S R A + Sbjct: 145 INTHLLNFVEKKLKQERLAQNYSENGETNALNTKNESTVQNIKNSLHPNEHSFIRDAAAL 204 Query: 288 GDI-ELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIE 346 G I E+ D + + R+ EKL K++ TS A+RD+ + K+ + I Sbjct: 205 GAIREVDLGIISTDVDNLKNGRKRQKKRARMKEKLDSKALRTSEDAARDEFIEKMLKPIS 264 Query: 347 PFNESTTSHEDF 358 ES + F Sbjct: 265 QDEESKGIYRRF 276 >SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 860 Score = 29.5 bits (63), Expect = 1.1 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 5/105 (4%) Query: 46 DRPECSFTKEF---GINDYNKQNRNKCDERTKNISPLKERVAFNREINCFTIVNRHFDYS 102 D E F E + D + DE +E+ F+ E N I + ++ Sbjct: 740 DEEESDFDSEEMDKAMTDMGSDSEQSADENDNESMASEEKPMFSDEENLSEIAHSEDEFD 799 Query: 103 DTSSEYED-RDIELFAASGDINR-ETVNWNQDHYQKTMNAFNTKD 145 DT +ED D+ F + D +TV+ ++ H K KD Sbjct: 800 DTVDFFEDENDLLPFNETDDEEEIQTVDHSETHSHKKKKRKAIKD 844 >SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 661 Score = 29.5 bits (63), Expect = 1.1 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 11/108 (10%) Query: 1 MEIIELDSSCSTLTPKSPDPQTSWNYNVRKKHDVKGNLNVTKTLNDRPECSFTKEFGIND 60 ++II ++S C+ L+ + +RK+ + + + +TL D+ EC T GI Sbjct: 50 IKIINIESKCNELSSEIS--------LLRKRLGIIEEIEIPRTLIDQYECLVTYHNGIRA 101 Query: 61 YNKQNRNKCDERTKNISPLKERVAFNREINCFTIVNRHF-DYSDTSSE 107 +N+ K I L V ++ VN F D SD E Sbjct: 102 IYNTKKNEAKNMYKEIERLS--VILGESVDEVNFVNGDFEDISDIKLE 147 >SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 801 Score = 29.1 bits (62), Expect = 1.5 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 2/93 (2%) Query: 72 RTKNISPLKERV--AFNREINCFTIVNRHFDYSDTSSEYEDRDIELFAASGDINRETVNW 129 +T+NI L+ + + E++ F V F D + E D+ + I+ E W Sbjct: 233 KTENIKSLEGELMGTISAELHLFDAVEEVFILQDPNVEASVFDLGDWNYWFTISTEEKTW 292 Query: 130 NQDHYQKTMNAFNTKDHEKTIWIYSYKNKNLLS 162 MN + +H IW Y N N S Sbjct: 293 LSQSVDADMNPVFSFEHLSFIWNYFDANSNAFS 325 >SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1031 Score = 28.7 bits (61), Expect = 1.9 Identities = 15/74 (20%), Positives = 30/74 (40%) Query: 15 PKSPDPQTSWNYNVRKKHDVKGNLNVTKTLNDRPECSFTKEFGINDYNKQNRNKCDERTK 74 P+ PD Q ++ + + V+ N T T D F+ I+D N ++ + + Sbjct: 90 PEIPDMQDEYSRDSHSQQSVEEQNNTTNTDEDASVNEFSVAADISDVNTLGKDNSESTEE 149 Query: 75 NISPLKERVAFNRE 88 ++ + E E Sbjct: 150 PVNEVNETATLGNE 163 >SPAC3H1.09c |||vacuolar amino acid transporter |Schizosaccharomyces pombe|chr 1|||Manual Length = 656 Score = 27.9 bits (59), Expect = 3.4 Identities = 15/43 (34%), Positives = 20/43 (46%) Query: 86 NREINCFTIVNRHFDYSDTSSEYEDRDIELFAASGDINRETVN 128 NR F V HF + S E ED D + FA D+N ++ Sbjct: 208 NRNFIEFLSVYGHFAGEELSEEDEDEDTDDFAMPRDVNPSLIH 250 >SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit Taf7|Schizosaccharomyces pombe|chr 1|||Manual Length = 393 Score = 27.9 bits (59), Expect = 3.4 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 249 DQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTAN 308 ++ + ++ E+ + + R NKR R EF+ EL S +K+ K N Sbjct: 306 EESASEEEEEEEEEEEEENEADDETRENKRQNRLVREFIS--ELESSIQKRRKDADEATN 363 Query: 309 PSL 311 P L Sbjct: 364 PIL 366 >SPBC1D7.01 |||prefoldin subunit 1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 112 Score = 27.5 bits (58), Expect = 4.5 Identities = 13/42 (30%), Positives = 20/42 (47%) Query: 320 KLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTTSHEDFGTN 361 K+ KS S D ++A + E+IE + T HE +N Sbjct: 58 KMFMKSDLASVRTHLDAEMASLREDIEALQKKQTYHETTASN 99 >SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces pombe|chr 1|||Manual Length = 591 Score = 27.5 bits (58), Expect = 4.5 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 202 IPTTYVPRLNLTLGQTLSTLTEVTEPVRPEML-NVCNSLQKQ--FNSWFPDQDTGDSDDS 258 +P++ + + LGQT S + + E P++ + ++ F F D D D+ Sbjct: 1 MPSSQISHQDPELGQTSSGSSSIKEKAEPQLYAGPIDPARRPDVFQEGFEDVSVTDDDND 60 Query: 259 NEKSRKL 265 NE RK+ Sbjct: 61 NELLRKM 67 >SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16 |Schizosaccharomyces pombe|chr 1|||Manual Length = 419 Score = 27.5 bits (58), Expect = 4.5 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%) Query: 249 DQDTGDSDDSNEKSRKLITQMGLSPRFNK---RSRRRCAEFVGDIELRSHPKKQDKQTST 305 DQD S DS+++S + + NK RS+R + ELR +K++++ Sbjct: 243 DQDVNHSIDSDDQSEHEQAETPIPSSKNKRKTRSQRNKIRQRREEELRLLEQKKNEELLR 302 Query: 306 TANPSLEVQKRLDEK 320 T + + + K+L +K Sbjct: 303 TIDKAPAISKKLQQK 317 >SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosaccharomyces pombe|chr 2|||Manual Length = 2358 Score = 27.1 bits (57), Expect = 5.9 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 10/122 (8%) Query: 237 NSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVGDIELRS-- 294 N ++N ++ DT SD + S + +S N R+ R + + +LRS Sbjct: 1697 NDQDIEYNEFYSQLDTSTSDIFQDTSVDGFPDLQVSSDINVRNDRLSSFVMSSEDLRSSD 1756 Query: 295 -HPKKQDKQTSTTA-----NPSLEVQKRLDE-KLHFKSIFTSSTASRDDKLAKIHEEIEP 347 HP+ D T + +P +V + L+E +L S+ S +++ L K + Sbjct: 1757 GHPENSDSVLETISSVHHRSPINQVVRNLNESQLSLDSVI-SMNLNKEFALTKTENDFTD 1815 Query: 348 FN 349 N Sbjct: 1816 DN 1817 >SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosaccharomyces pombe|chr 2|||Manual Length = 490 Score = 26.6 bits (56), Expect = 7.8 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 5/97 (5%) Query: 295 HPKKQDK---QTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNES 351 HP + K QTS + S + L+ K K +F+S T R + K + + S Sbjct: 81 HPNSRQKHQHQTSKSVPRSQRFSRELNVKKENKKVFSSQTTKRQSR--KQSTALTTNDTS 138 Query: 352 TTSHEDFGTNEARIERKRLRKPHITMERTFTKDKITD 388 + TN ++ + R + +R + I + Sbjct: 139 IILDDSLHTNSKKLGKTRNEVKEESQKRELVSNSIKE 175 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.314 0.129 0.385 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,337,262 Number of Sequences: 5004 Number of extensions: 102281 Number of successful extensions: 280 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 272 Number of HSP's gapped (non-prelim): 14 length of query: 490 length of database: 2,362,478 effective HSP length: 76 effective length of query: 414 effective length of database: 1,982,174 effective search space: 820620036 effective search space used: 820620036 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (22.0 bits) S2: 56 (26.6 bits)
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