BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001489-TA|BGIBMGA001489-PA|undefined (490 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_02_0335 - 17669232-17670063,17670619-17672150 33 0.68 02_01_0750 + 5574707-5576017 32 1.2 01_01_0171 + 1446221-1446902,1447040-1447221,1447339-1447409,144... 32 1.2 05_02_0065 - 6276439-6276462,6276716-6276781,6277035-6277100,627... 30 3.6 02_01_0311 - 2075881-2076165,2076450-2076519,2076628-2076691,207... 30 3.6 07_03_0032 - 12651989-12652636,12652726-12652956,12653515-126536... 29 6.3 01_03_0114 - 12649104-12649141,12650137-12650245,12650500-126506... 29 8.4 >12_02_0335 - 17669232-17670063,17670619-17672150 Length = 787 Score = 32.7 bits (71), Expect = 0.68 Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 3/93 (3%) Query: 250 QDTGDSDDSNEKSRKLITQMGLSP-RFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTAN 308 Q G+S +++ LI ++ ++P +F+K S R +EF D + + + ++ Sbjct: 149 QSNGESHLHDDEKMNLI-EISITPEKFSKNSSRATSEFSEDCDFETADGSAVTSLHSASS 207 Query: 309 PSLEVQK-RLDEKLHFKSIFTSSTASRDDKLAK 340 S E+QK R+ + + I + S+ ++KL K Sbjct: 208 TSAEIQKIRIQDVISGDPIDSESSMVENEKLNK 240 >02_01_0750 + 5574707-5576017 Length = 436 Score = 31.9 bits (69), Expect = 1.2 Identities = 13/39 (33%), Positives = 19/39 (48%) Query: 85 FNREINCFTIVNRHFDYSDTSSEYEDRDIELFAASGDIN 123 F R+I F + + F Y D DRD+EL G ++ Sbjct: 224 FTRKILSFNLTDEKFSYLDVPDSVRDRDLELVEGEGKLH 262 >01_01_0171 + 1446221-1446902,1447040-1447221,1447339-1447409, 1447480-1447486,1447530-1447619,1447694-1447981, 1448121-1448333,1448860-1449087 Length = 586 Score = 31.9 bits (69), Expect = 1.2 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 7/88 (7%) Query: 287 VGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIE 346 V D+E +K DK + A+ +EV+KR E+L +S + +TAS + + + ++++ Sbjct: 168 VADLE-NEGTRKTDKLVANLAS-QVEVKKRHVEEL--ESQYNETTASLERVMEQREQQLQ 223 Query: 347 PFNESTTSHEDFGTNEA-RI--ERKRLR 371 +NE +D + RI E K+LR Sbjct: 224 AYNEEIRKMQDLALRHSQRIMDENKKLR 251 >05_02_0065 - 6276439-6276462,6276716-6276781,6277035-6277100, 6277384-6277449,6277698-6277745,6278233-6278292, 6278418-6278483,6278569-6278652,6278736-6278801, 6278878-6279036,6279106-6279222,6279305-6279397, 6279697-6279900,6280013-6280161,6280234-6280492 Length = 508 Score = 30.3 bits (65), Expect = 3.6 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 10/105 (9%) Query: 58 INDYNKQNRNKCD--ERTKNISPLKERVAFNREINCFTIVNRHFDYSDTSSEYEDRDIEL 115 + D NKQN + D ++ K IS K + + F N DT+ +++ ++L Sbjct: 396 VEDKNKQNWEQHDYGKQRKVISAQKRQCSTTN----FIADN---SMEDTNIHVQNKVLQL 448 Query: 116 FAASGDINRETVNWNQ-DHYQKTMNAFNTKDHEKTIWIYSYKNKN 159 I + N NQ DH Q+ N N +++ S+KN+N Sbjct: 449 PTKQSTIYKNKGNMNQNDHMQQGKNNSNAYKIGTNVFLKSWKNRN 493 >02_01_0311 - 2075881-2076165,2076450-2076519,2076628-2076691, 2076798-2076837,2076930-2077006,2077095-2077311, 2077482-2078132 Length = 467 Score = 30.3 bits (65), Expect = 3.6 Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 295 HPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTTS 354 H KK+ Q + +EVQK+L E+L + L KI EE + ES +S Sbjct: 346 HAKKKSAQMAEALRMQMEVQKQLHEQLEVQRQLQLRIEEHARYLQKILEEQQKARESISS 405 >07_03_0032 - 12651989-12652636,12652726-12652956,12653515-12653634, 12653768-12653891,12654023-12654366 Length = 488 Score = 29.5 bits (63), Expect = 6.3 Identities = 15/57 (26%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Query: 313 VQKRLDEKLHFKSIFT--SSTASRDDKLAKIHEEIEPFNESTTSHEDFGTNEARIER 367 + K L E+ H +S ++ SS +S D+L ++H +E +S + ++FG + ++ ++ Sbjct: 295 ILKTLREREHDESEYSAISSQSSSSDELDEMHHHVEQGGDSGSDTDNFGDDGSQSQK 351 >01_03_0114 - 12649104-12649141,12650137-12650245,12650500-12650691, 12650797-12650904,12650986-12651162,12652331-12652459, 12653314-12653589,12653667-12653916,12654909-12655561 Length = 643 Score = 29.1 bits (62), Expect = 8.4 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 133 HYQKTMNAFNTKDHEKTIWIYSYKNKNLLSDYEPINYSNE 172 H ++T+ F +D IWI YKN + +NY N+ Sbjct: 525 HQERTLQLFKLEDVAMGIWIQQYKNSG-----QKVNYVND 559 Database: rice Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.314 0.129 0.385 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,429,077 Number of Sequences: 37544 Number of extensions: 534999 Number of successful extensions: 1028 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 1027 Number of HSP's gapped (non-prelim): 7 length of query: 490 length of database: 14,793,348 effective HSP length: 85 effective length of query: 405 effective length of database: 11,602,108 effective search space: 4698853740 effective search space used: 4698853740 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (22.0 bits) S2: 62 (29.1 bits)
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