Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001489-TA|BGIBMGA001489-PA|undefined
(490 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29614| Best HMM Match : Flavodoxin_1 (HMM E-Value=0.22) 35 0.13
SB_24314| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.23
SB_1026| Best HMM Match : PDZ (HMM E-Value=9.7e-08) 33 0.69
SB_43095| Best HMM Match : DUF1279 (HMM E-Value=0.52) 32 1.2
SB_28059| Best HMM Match : DUF149 (HMM E-Value=0.71) 31 1.6
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_47477| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052) 30 3.7
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 30 4.8
SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.8
SB_26781| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.8
SB_11248| Best HMM Match : LMP (HMM E-Value=0.18) 30 4.8
SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.8
SB_14922| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_9092| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_39062| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_22526| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_20303| Best HMM Match : Trans_reg_C (HMM E-Value=0.38) 29 6.4
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 29 8.5
SB_34220| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
SB_23579| Best HMM Match : PspA_IM30 (HMM E-Value=1.5) 29 8.5
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
>SB_29614| Best HMM Match : Flavodoxin_1 (HMM E-Value=0.22)
Length = 726
Score = 35.1 bits (77), Expect = 0.13
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 250 QDTGDSDDSNEKSRKLITQMGLSPRFNKRSRR--RCAEFVGDIE--LRSHPKKQDKQTST 305
+ + D D +E+ +++++ ++ ++ + RC + V D+ L S K D+Q +
Sbjct: 29 KSSNDDDKKDEEVKEILSLAETEGKYKRKRKECPRCKKHVKDLNRHLMSVHKVADRQAAK 88
Query: 306 TANPSLEVQKRLDEKLHFKSIFTSSTASRDDK-LAKIHEEIEPFNESTTSHEDFGTNEAR 364
E +K D++ SR DK L H + P +S+ + + EAR
Sbjct: 89 QLRVQ-EGEKPSDKRPLKTCCECGKRVSRLDKHLISAHPKKYP--KSSDAFKS-AMREAR 144
Query: 365 IERKRLRKPHITMERTFTKDKITDPI 390
I+ K L+KP I + D++ P+
Sbjct: 145 IQGKPLKKPEIVYDSMGVNDEMVAPV 170
>SB_24314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 34.3 bits (75), Expect = 0.23
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 221 LTEVTEPVRPEMLNVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRFNKRSR 280
+ EV RPE + C+ L FNS ++ D N++ R + + L P K +R
Sbjct: 135 MAEVQSLDRPEWIRNCSQLADHFNSRLMEK----YDHGNDEIRVIFDRYDL-PSSLKETR 189
Query: 281 RRCAEFVGDIELRSHPKKQDKQTSTT 306
+R + + SH K +++TS T
Sbjct: 190 KRSPYSLSHHTINSHRKAYNEETSCT 215
>SB_1026| Best HMM Match : PDZ (HMM E-Value=9.7e-08)
Length = 924
Score = 32.7 bits (71), Expect = 0.69
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 300 DKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTTSHED 357
+ S + + +V++RLDE H + S+ S ++A++H EP S + HED
Sbjct: 366 ESDPSRPTSSASDVEQRLDESGHASELDDSAERSYFQEMARLHSP-EPMEISASFHED 422
>SB_43095| Best HMM Match : DUF1279 (HMM E-Value=0.52)
Length = 281
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 27 NVRKKHDVKGNLNVTKTLNDRPECSFTKEFGINDYNKQNRNKCDE------RTKNISPLK 80
N+++ +++G + + D P S ++ + N++ R++ DE +N PL+
Sbjct: 116 NIKRVQELQGVVATDRETIDDPNASESRSQEARERNEERRSEIDELERENRELENQKPLR 175
Query: 81 ERVAFNREINCFTIV 95
ER+ + CFT++
Sbjct: 176 ERIKAIFKKYCFTVI 190
>SB_28059| Best HMM Match : DUF149 (HMM E-Value=0.71)
Length = 1043
Score = 31.5 bits (68), Expect = 1.6
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Query: 254 DSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEV 313
D + + R+ I + + N S+R F +IEL+ KK+ +++
Sbjct: 803 DHRNKRRRIRRSIEEKNQTTEENNASKRTEGTF--EIELKMSDKKKKEESDEEFRDDTSK 860
Query: 314 QKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPF 348
Q +K+ F+ F+ D + K E E F
Sbjct: 861 QSDKKKKMEFEGSFSDDKKEESDNIKKGSESKESF 895
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/106 (16%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 276 NKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRD 335
N + ++ A+ +I +++ + T + + ++++L+E + K++ ++
Sbjct: 889 NAKLEQQVAQLTKEIAGLEETRRKHLEAEKTKSSIVSLERKLEEVCNKKNVVEKLLREKN 948
Query: 336 DKLAKIHEEIEPFNESTTSHEDFGTNEARIERKRLRKPHITMERTF 381
+ EE+ E + E+ E E++R H+ M R F
Sbjct: 949 ASCTDLQEEVYRLKEKLANMENAHQREMETEKQR----HVLMSRDF 990
Score = 29.5 bits (63), Expect = 6.4
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 276 NKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRD 335
N R E + D+E + + +++K S + E + R+DE KS + S ++
Sbjct: 411 NSLDFRVAKEKISDLEQKVNQLEREK--SRLLEENAEFKVRMDELESEKSELSDSVLNKQ 468
Query: 336 DKLAKIHEEIEPFNESTTSHEDFG-TNEARIERKRLRKPHITMERTFTKDKITDPIEKLE 394
+L K E+I+ E T ++ T E R K+ + I + +T K+T+ + LE
Sbjct: 469 RQLLKAEEDIK---ELTLKDQELDVTVELRGAEKQQLEEEI-LNQTHQITKLTEQVTGLE 524
>SB_47477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 30.3 bits (65), Expect = 3.7
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 290 IELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIH--EEIEP 347
I L +P+KQ ++ +T LE+ + L K + IF R++ KI+ E
Sbjct: 430 IALLGYPRKQRRERTTFTKNQLEILEELFAKTRYPDIF-----MREEVAIKINLPESRVQ 484
Query: 348 FNESTTSHEDFGTNEARIERKRLRKPH---ITMERTFTK 383
++ T + + + RK +R+ H +T ER +K
Sbjct: 485 SSKQTPAFSPRAATDRKTPRKTVREKHQSVLTAERAKSK 523
>SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052)
Length = 649
Score = 30.3 bits (65), Expect = 3.7
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 277 KRSRRRCAEFVGDIELR-SHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRD 335
+R +++ AE IE + + +K K S + +K LD+ + + I + R+
Sbjct: 335 QRMKQQAAESKAYIEQQEAEERKLLKIISEADAERMRQKKELDQVIGERDILGTQLVRRN 394
Query: 336 DKLAKIHEEIEPFNESTTSHEDFGTNEARIERKRLRKPHITMERTFTKDKITDPIEKLE 394
D+LA ++E+I+ +ST + + + R+E RL K I R K+ +T + +E
Sbjct: 395 DELALLYEKIK-IQQSTLNKGEIQYRQ-RLEDIRLLKLEIKKLRR-EKNILTKNVANVE 450
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 30.3 bits (65), Expect = 3.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 318 DEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTTSHEDFGTNEARIERKR 369
D+ + KS FT ++ RDD AK+ E E + + E+ T + E+ R
Sbjct: 3131 DKMMELKSQFTRTSDERDDLKAKLEETEETLASTKENLEETSTKLSETEKLR 3182
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 29.9 bits (64), Expect = 4.8
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Query: 229 RPEMLNVCNSLQKQFNSWFPD----QDTGDSDDSN--EKSRKLITQMGLSPRFNKRSRRR 282
R E+ + + L KQ S+ + ++ + D+ EK L ++ + SRRR
Sbjct: 811 RQELSVIVDDLSKQLESYISNCAELEEAKRAMDNRLTEKVESLTEKIKELENDLEESRRR 870
Query: 283 CAEFVG-----DIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSI 326
C E G + ++ +QD S + N LE +K+ E HF+ I
Sbjct: 871 CLELEGGQVDSETAIKIAQLEQDLSDSQSTNVELEEEKKNIEVKHFEEI 919
>SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 504
Score = 29.9 bits (64), Expect = 4.8
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 264 KLITQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHF 323
+L +++G++P S AE + P++ +KQ S T E + + ++ H
Sbjct: 308 ELASKIGVAPPPAADSDEEAAEPGAWSDEEKKPQQPEKQRSETNRSRTESKGKKEKHHHH 367
Query: 324 KS--IFTSSTASRDDKLAKIHEEIEPFNEST 352
K T S + DK K+++E + F++ T
Sbjct: 368 KKGRSRTKSGEKKHDKSKKVNDEEDLFSQPT 398
>SB_26781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 297 KKQDKQTSTTANPSLEVQKRLD-EKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTTSH 355
KK+ K+ TA LE ++++ EK + + +S + AK+H E++
Sbjct: 65 KKRRKEQRATAREELETKRQIAREKTRERHVLETSQTEAFQEFAKLHPEVKVAQRKFEML 124
Query: 356 EDFGTNEARIERKR 369
+ + +AR ER R
Sbjct: 125 KPYFVKQAR-ERDR 137
>SB_11248| Best HMM Match : LMP (HMM E-Value=0.18)
Length = 442
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 95 VNRHFDYSDTSSEYEDRDIELFAASGDINRETVNWNQDHYQKTMNAFNTKDHE-KTIWIY 153
V+ DY + E+E + D+ + W Q Q +++ N+ +H+ +TI
Sbjct: 325 VSLRSDYEELEGEHERLTSRHSRVTQDLEEKETAWRQRIQQLQLDSTNSTEHQAETIRHL 384
Query: 154 SYKNKNLLSDYEPINYS 170
S +N+ + + Y+ ++ S
Sbjct: 385 SEQNETISNTYKGMDQS 401
>SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1090
Score = 29.9 bits (64), Expect = 4.8
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 264 KLITQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHF 323
+L +++G++P S AE + P++ +KQ S T E + + ++ H
Sbjct: 172 ELASKIGVAPPPAADSDEEAAEPGAWSDEEKKPQQPEKQRSETNRSRTESKGKKEKHHHH 231
Query: 324 KS--IFTSSTASRDDKLAKIHEEIEPFNEST 352
K T S + DK K+++E + F++ T
Sbjct: 232 KKGRSRTKSGEKKHDKSKKVNDEEDLFSQPT 262
>SB_14922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 29.5 bits (63), Expect = 6.4
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 269 MGLSPRFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFT 328
+GL R+ R R+ EF D+EL + K+ + PSL QK+ K+ + +
Sbjct: 186 IGLLLRYLLRQRKLKMEFEDDLELTEKREYSKKKIMSLPMPSLSSQKK-TPKVIYSPTSS 244
Query: 329 SSTASRDDKLAKIHEEIEPFNESTTS 354
S+ R L + N S TS
Sbjct: 245 RSSNKRHSSLPGPSRQRSITNVSDTS 270
>SB_9092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 29.5 bits (63), Expect = 6.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 221 LTEVTEPVRPEMLNVCNSLQKQFNSWFPDQDTGDSD 256
+ T P +PE + V + + + SW P DTG D
Sbjct: 475 IRHATPPSKPENIEVNVTCDRAYFSWTPPSDTGGMD 510
>SB_39062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 29.5 bits (63), Expect = 6.4
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 252 TGDSDDSNEKSRKLI-TQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPS 310
T D K RKL T++ SP+ K + + GD + + PK QD +T N
Sbjct: 10 TKTEDRVPAKKRKLSETKLKSSPKSAKATPSK----TGDKQRKKTPKDQDTNKGSTDNAD 65
Query: 311 LEVQKRLDEKLHF 323
+E+++ KL F
Sbjct: 66 VEIKRDKQGKLVF 78
>SB_22526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 666
Score = 29.5 bits (63), Expect = 6.4
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 28 VRKKHDVKGNLNVTKTLNDRPECSFTKEFGINDYNKQNRNKCDERTKNISPLKERVAFNR 87
++K+HD+ N + ++DR KE + K+ ++K D+ T+N LKE+V +
Sbjct: 174 LQKQHDISDN---SVLIHDR-----MKEHEVEQLKKKLKDKHDDLTENYINLKEKVTGEQ 225
Query: 88 EINCFT 93
++ F+
Sbjct: 226 QVREFS 231
>SB_20303| Best HMM Match : Trans_reg_C (HMM E-Value=0.38)
Length = 1354
Score = 29.5 bits (63), Expect = 6.4
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 303 TSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTTSHEDFGTNE 362
T T + PSL +L E LH + +A D L K HEE++ E+ + D +
Sbjct: 640 TETESRPSL---LKLLEGLHDNTHVQEHSAMIDWVLKKFHEELDARKETGQAQTDRPARK 696
Query: 363 --ARIERKRLRKPHITMER 379
+++E ++ RK + +R
Sbjct: 697 DTSQLEDEKARKARLAQQR 715
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 29.1 bits (62), Expect = 8.5
Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 277 KRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDD 336
+R + E + D + ++ +++ ++ + LEVQK+ +EK + +
Sbjct: 1147 RREEEQAQEKLKDAKRKAREERESRRAAEAERRRLEVQKKREEKKKREEEMREKEKEMEQ 1206
Query: 337 KLAKIHEEIEPFNESTTSHE--DFGTNEARIERKRLRK-PHITMERTFTKDKITDPIEKL 393
+ + ES E D E R+E +RLR+ +R +++I + E+L
Sbjct: 1207 NKIDQEKRKQELMESRRFQEEQDRLEEERRLEEERLRQLEEEDEQRRLEEEQIREAEEEL 1266
>SB_34220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 29.1 bits (62), Expect = 8.5
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 289 DIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPF 348
DI+ KK Q +T + P+L+ + + +S + T K H+ IEPF
Sbjct: 252 DIDHFKPYKKTALQPTTISIPALQYVRANTAERRTRSPIQTVTTWAPQKKTTPHKPIEPF 311
Query: 349 -NESTTSHED-FGTNEARIERKRLRKPHIT 376
+ T H +G NE R E + + ++T
Sbjct: 312 RGKLQTRHSHLYGENENRDEGNKPSQENLT 341
>SB_23579| Best HMM Match : PspA_IM30 (HMM E-Value=1.5)
Length = 207
Score = 29.1 bits (62), Expect = 8.5
Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 1/132 (0%)
Query: 264 KLITQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHF 323
K++ + + R ++ R D+ L K D E +D KL
Sbjct: 23 KIVQMVNNTARVTRKDARDTEASCVDVSLSVRKKNMDILHLNDEVKRYEKLLAMDRKLPR 82
Query: 324 KSIFTSSTASRDDKLAKIHEEIEPFNESTTSHEDFGTNEARIERKRLRKPHITMERTFTK 383
+SI + +L E+E ++ + E R E K+ +K + ++ T +
Sbjct: 83 RSILEERLGRAEAELEHKDRELENLHKQVVVADKKAAREIRKENKKYQKLQVEVQGTVNE 142
Query: 384 -DKITDPIEKLE 394
D++ I+ E
Sbjct: 143 CDELKSRIKDAE 154
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 29.1 bits (62), Expect = 8.5
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 209 RLNLTLGQTLSTLTEVTEPVRPEMLNVCNSLQKQFNSWFPDQDTGDSDDSNE-KSRKLIT 267
RLN T +T+T +EP P++ +S+Q+ ++ P Q+ G + ++ + KS ++
Sbjct: 435 RLNDGSVHTSTTITPASEPDMPQIQRTDSSVQRMESNQAPVQNFGQAAETTQGKSEGQLS 494
Query: 268 QMGLSPRFNKRSRRRCAEFVGDIELRSHPK 297
SP+ N+ E +E S P+
Sbjct: 495 ----SPQHNEEHPDHQGEDSNKVEQLSTPQ 520
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.129 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,666,585
Number of Sequences: 59808
Number of extensions: 715650
Number of successful extensions: 1762
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1751
Number of HSP's gapped (non-prelim): 30
length of query: 490
length of database: 16,821,457
effective HSP length: 85
effective length of query: 405
effective length of database: 11,737,777
effective search space: 4753799685
effective search space used: 4753799685
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 62 (29.1 bits)
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