BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001489-TA|BGIBMGA001489-PA|undefined (490 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_29614| Best HMM Match : Flavodoxin_1 (HMM E-Value=0.22) 35 0.13 SB_24314| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.23 SB_1026| Best HMM Match : PDZ (HMM E-Value=9.7e-08) 33 0.69 SB_43095| Best HMM Match : DUF1279 (HMM E-Value=0.52) 32 1.2 SB_28059| Best HMM Match : DUF149 (HMM E-Value=0.71) 31 1.6 SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6 SB_47477| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7 SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052) 30 3.7 SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7 SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 30 4.8 SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.8 SB_26781| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.8 SB_11248| Best HMM Match : LMP (HMM E-Value=0.18) 30 4.8 SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.8 SB_14922| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4 SB_9092| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4 SB_39062| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4 SB_22526| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4 SB_20303| Best HMM Match : Trans_reg_C (HMM E-Value=0.38) 29 6.4 SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 29 8.5 SB_34220| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5 SB_23579| Best HMM Match : PspA_IM30 (HMM E-Value=1.5) 29 8.5 SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5 >SB_29614| Best HMM Match : Flavodoxin_1 (HMM E-Value=0.22) Length = 726 Score = 35.1 bits (77), Expect = 0.13 Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 9/146 (6%) Query: 250 QDTGDSDDSNEKSRKLITQMGLSPRFNKRSRR--RCAEFVGDIE--LRSHPKKQDKQTST 305 + + D D +E+ +++++ ++ ++ + RC + V D+ L S K D+Q + Sbjct: 29 KSSNDDDKKDEEVKEILSLAETEGKYKRKRKECPRCKKHVKDLNRHLMSVHKVADRQAAK 88 Query: 306 TANPSLEVQKRLDEKLHFKSIFTSSTASRDDK-LAKIHEEIEPFNESTTSHEDFGTNEAR 364 E +K D++ SR DK L H + P +S+ + + EAR Sbjct: 89 QLRVQ-EGEKPSDKRPLKTCCECGKRVSRLDKHLISAHPKKYP--KSSDAFKS-AMREAR 144 Query: 365 IERKRLRKPHITMERTFTKDKITDPI 390 I+ K L+KP I + D++ P+ Sbjct: 145 IQGKPLKKPEIVYDSMGVNDEMVAPV 170 >SB_24314| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 453 Score = 34.3 bits (75), Expect = 0.23 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 5/86 (5%) Query: 221 LTEVTEPVRPEMLNVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRFNKRSR 280 + EV RPE + C+ L FNS ++ D N++ R + + L P K +R Sbjct: 135 MAEVQSLDRPEWIRNCSQLADHFNSRLMEK----YDHGNDEIRVIFDRYDL-PSSLKETR 189 Query: 281 RRCAEFVGDIELRSHPKKQDKQTSTT 306 +R + + SH K +++TS T Sbjct: 190 KRSPYSLSHHTINSHRKAYNEETSCT 215 >SB_1026| Best HMM Match : PDZ (HMM E-Value=9.7e-08) Length = 924 Score = 32.7 bits (71), Expect = 0.69 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 300 DKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTTSHED 357 + S + + +V++RLDE H + S+ S ++A++H EP S + HED Sbjct: 366 ESDPSRPTSSASDVEQRLDESGHASELDDSAERSYFQEMARLHSP-EPMEISASFHED 422 >SB_43095| Best HMM Match : DUF1279 (HMM E-Value=0.52) Length = 281 Score = 31.9 bits (69), Expect = 1.2 Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Query: 27 NVRKKHDVKGNLNVTKTLNDRPECSFTKEFGINDYNKQNRNKCDE------RTKNISPLK 80 N+++ +++G + + D P S ++ + N++ R++ DE +N PL+ Sbjct: 116 NIKRVQELQGVVATDRETIDDPNASESRSQEARERNEERRSEIDELERENRELENQKPLR 175 Query: 81 ERVAFNREINCFTIV 95 ER+ + CFT++ Sbjct: 176 ERIKAIFKKYCFTVI 190 >SB_28059| Best HMM Match : DUF149 (HMM E-Value=0.71) Length = 1043 Score = 31.5 bits (68), Expect = 1.6 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 2/95 (2%) Query: 254 DSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEV 313 D + + R+ I + + N S+R F +IEL+ KK+ +++ Sbjct: 803 DHRNKRRRIRRSIEEKNQTTEENNASKRTEGTF--EIELKMSDKKKKEESDEEFRDDTSK 860 Query: 314 QKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPF 348 Q +K+ F+ F+ D + K E E F Sbjct: 861 QSDKKKKMEFEGSFSDDKKEESDNIKKGSESKESF 895 >SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1218 Score = 31.5 bits (68), Expect = 1.6 Identities = 18/106 (16%), Positives = 46/106 (43%), Gaps = 4/106 (3%) Query: 276 NKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRD 335 N + ++ A+ +I +++ + T + + ++++L+E + K++ ++ Sbjct: 889 NAKLEQQVAQLTKEIAGLEETRRKHLEAEKTKSSIVSLERKLEEVCNKKNVVEKLLREKN 948 Query: 336 DKLAKIHEEIEPFNESTTSHEDFGTNEARIERKRLRKPHITMERTF 381 + EE+ E + E+ E E++R H+ M R F Sbjct: 949 ASCTDLQEEVYRLKEKLANMENAHQREMETEKQR----HVLMSRDF 990 Score = 29.5 bits (63), Expect = 6.4 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 7/120 (5%) Query: 276 NKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRD 335 N R E + D+E + + +++K S + E + R+DE KS + S ++ Sbjct: 411 NSLDFRVAKEKISDLEQKVNQLEREK--SRLLEENAEFKVRMDELESEKSELSDSVLNKQ 468 Query: 336 DKLAKIHEEIEPFNESTTSHEDFG-TNEARIERKRLRKPHITMERTFTKDKITDPIEKLE 394 +L K E+I+ E T ++ T E R K+ + I + +T K+T+ + LE Sbjct: 469 RQLLKAEEDIK---ELTLKDQELDVTVELRGAEKQQLEEEI-LNQTHQITKLTEQVTGLE 524 >SB_47477| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 632 Score = 30.3 bits (65), Expect = 3.7 Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 10/99 (10%) Query: 290 IELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIH--EEIEP 347 I L +P+KQ ++ +T LE+ + L K + IF R++ KI+ E Sbjct: 430 IALLGYPRKQRRERTTFTKNQLEILEELFAKTRYPDIF-----MREEVAIKINLPESRVQ 484 Query: 348 FNESTTSHEDFGTNEARIERKRLRKPH---ITMERTFTK 383 ++ T + + + RK +R+ H +T ER +K Sbjct: 485 SSKQTPAFSPRAATDRKTPRKTVREKHQSVLTAERAKSK 523 >SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052) Length = 649 Score = 30.3 bits (65), Expect = 3.7 Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 4/119 (3%) Query: 277 KRSRRRCAEFVGDIELR-SHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRD 335 +R +++ AE IE + + +K K S + +K LD+ + + I + R+ Sbjct: 335 QRMKQQAAESKAYIEQQEAEERKLLKIISEADAERMRQKKELDQVIGERDILGTQLVRRN 394 Query: 336 DKLAKIHEEIEPFNESTTSHEDFGTNEARIERKRLRKPHITMERTFTKDKITDPIEKLE 394 D+LA ++E+I+ +ST + + + R+E RL K I R K+ +T + +E Sbjct: 395 DELALLYEKIK-IQQSTLNKGEIQYRQ-RLEDIRLLKLEIKKLRR-EKNILTKNVANVE 450 >SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3934 Score = 30.3 bits (65), Expect = 3.7 Identities = 16/52 (30%), Positives = 26/52 (50%) Query: 318 DEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTTSHEDFGTNEARIERKR 369 D+ + KS FT ++ RDD AK+ E E + + E+ T + E+ R Sbjct: 3131 DKMMELKSQFTRTSDERDDLKAKLEETEETLASTKENLEETSTKLSETEKLR 3182 >SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) Length = 1709 Score = 29.9 bits (64), Expect = 4.8 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 11/109 (10%) Query: 229 RPEMLNVCNSLQKQFNSWFPD----QDTGDSDDSN--EKSRKLITQMGLSPRFNKRSRRR 282 R E+ + + L KQ S+ + ++ + D+ EK L ++ + SRRR Sbjct: 811 RQELSVIVDDLSKQLESYISNCAELEEAKRAMDNRLTEKVESLTEKIKELENDLEESRRR 870 Query: 283 CAEFVG-----DIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSI 326 C E G + ++ +QD S + N LE +K+ E HF+ I Sbjct: 871 CLELEGGQVDSETAIKIAQLEQDLSDSQSTNVELEEEKKNIEVKHFEEI 919 >SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 504 Score = 29.9 bits (64), Expect = 4.8 Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 2/91 (2%) Query: 264 KLITQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHF 323 +L +++G++P S AE + P++ +KQ S T E + + ++ H Sbjct: 308 ELASKIGVAPPPAADSDEEAAEPGAWSDEEKKPQQPEKQRSETNRSRTESKGKKEKHHHH 367 Query: 324 KS--IFTSSTASRDDKLAKIHEEIEPFNEST 352 K T S + DK K+++E + F++ T Sbjct: 368 KKGRSRTKSGEKKHDKSKKVNDEEDLFSQPT 398 >SB_26781| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 707 Score = 29.9 bits (64), Expect = 4.8 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%) Query: 297 KKQDKQTSTTANPSLEVQKRLD-EKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTTSH 355 KK+ K+ TA LE ++++ EK + + +S + AK+H E++ Sbjct: 65 KKRRKEQRATAREELETKRQIAREKTRERHVLETSQTEAFQEFAKLHPEVKVAQRKFEML 124 Query: 356 EDFGTNEARIERKR 369 + + +AR ER R Sbjct: 125 KPYFVKQAR-ERDR 137 >SB_11248| Best HMM Match : LMP (HMM E-Value=0.18) Length = 442 Score = 29.9 bits (64), Expect = 4.8 Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 1/77 (1%) Query: 95 VNRHFDYSDTSSEYEDRDIELFAASGDINRETVNWNQDHYQKTMNAFNTKDHE-KTIWIY 153 V+ DY + E+E + D+ + W Q Q +++ N+ +H+ +TI Sbjct: 325 VSLRSDYEELEGEHERLTSRHSRVTQDLEEKETAWRQRIQQLQLDSTNSTEHQAETIRHL 384 Query: 154 SYKNKNLLSDYEPINYS 170 S +N+ + + Y+ ++ S Sbjct: 385 SEQNETISNTYKGMDQS 401 >SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1090 Score = 29.9 bits (64), Expect = 4.8 Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 2/91 (2%) Query: 264 KLITQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHF 323 +L +++G++P S AE + P++ +KQ S T E + + ++ H Sbjct: 172 ELASKIGVAPPPAADSDEEAAEPGAWSDEEKKPQQPEKQRSETNRSRTESKGKKEKHHHH 231 Query: 324 KS--IFTSSTASRDDKLAKIHEEIEPFNEST 352 K T S + DK K+++E + F++ T Sbjct: 232 KKGRSRTKSGEKKHDKSKKVNDEEDLFSQPT 262 >SB_14922| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 505 Score = 29.5 bits (63), Expect = 6.4 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 1/86 (1%) Query: 269 MGLSPRFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFT 328 +GL R+ R R+ EF D+EL + K+ + PSL QK+ K+ + + Sbjct: 186 IGLLLRYLLRQRKLKMEFEDDLELTEKREYSKKKIMSLPMPSLSSQKK-TPKVIYSPTSS 244 Query: 329 SSTASRDDKLAKIHEEIEPFNESTTS 354 S+ R L + N S TS Sbjct: 245 RSSNKRHSSLPGPSRQRSITNVSDTS 270 >SB_9092| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 662 Score = 29.5 bits (63), Expect = 6.4 Identities = 12/36 (33%), Positives = 18/36 (50%) Query: 221 LTEVTEPVRPEMLNVCNSLQKQFNSWFPDQDTGDSD 256 + T P +PE + V + + + SW P DTG D Sbjct: 475 IRHATPPSKPENIEVNVTCDRAYFSWTPPSDTGGMD 510 >SB_39062| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 256 Score = 29.5 bits (63), Expect = 6.4 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%) Query: 252 TGDSDDSNEKSRKLI-TQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPS 310 T D K RKL T++ SP+ K + + GD + + PK QD +T N Sbjct: 10 TKTEDRVPAKKRKLSETKLKSSPKSAKATPSK----TGDKQRKKTPKDQDTNKGSTDNAD 65 Query: 311 LEVQKRLDEKLHF 323 +E+++ KL F Sbjct: 66 VEIKRDKQGKLVF 78 >SB_22526| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 666 Score = 29.5 bits (63), Expect = 6.4 Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 8/66 (12%) Query: 28 VRKKHDVKGNLNVTKTLNDRPECSFTKEFGINDYNKQNRNKCDERTKNISPLKERVAFNR 87 ++K+HD+ N + ++DR KE + K+ ++K D+ T+N LKE+V + Sbjct: 174 LQKQHDISDN---SVLIHDR-----MKEHEVEQLKKKLKDKHDDLTENYINLKEKVTGEQ 225 Query: 88 EINCFT 93 ++ F+ Sbjct: 226 QVREFS 231 >SB_20303| Best HMM Match : Trans_reg_C (HMM E-Value=0.38) Length = 1354 Score = 29.5 bits (63), Expect = 6.4 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 5/79 (6%) Query: 303 TSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTTSHEDFGTNE 362 T T + PSL +L E LH + +A D L K HEE++ E+ + D + Sbjct: 640 TETESRPSL---LKLLEGLHDNTHVQEHSAMIDWVLKKFHEELDARKETGQAQTDRPARK 696 Query: 363 --ARIERKRLRKPHITMER 379 +++E ++ RK + +R Sbjct: 697 DTSQLEDEKARKARLAQQR 715 >SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) Length = 1421 Score = 29.1 bits (62), Expect = 8.5 Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 3/120 (2%) Query: 277 KRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDD 336 +R + E + D + ++ +++ ++ + LEVQK+ +EK + + Sbjct: 1147 RREEEQAQEKLKDAKRKAREERESRRAAEAERRRLEVQKKREEKKKREEEMREKEKEMEQ 1206 Query: 337 KLAKIHEEIEPFNESTTSHE--DFGTNEARIERKRLRK-PHITMERTFTKDKITDPIEKL 393 + + ES E D E R+E +RLR+ +R +++I + E+L Sbjct: 1207 NKIDQEKRKQELMESRRFQEEQDRLEEERRLEEERLRQLEEEDEQRRLEEEQIREAEEEL 1266 >SB_34220| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 452 Score = 29.1 bits (62), Expect = 8.5 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 2/90 (2%) Query: 289 DIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPF 348 DI+ KK Q +T + P+L+ + + +S + T K H+ IEPF Sbjct: 252 DIDHFKPYKKTALQPTTISIPALQYVRANTAERRTRSPIQTVTTWAPQKKTTPHKPIEPF 311 Query: 349 -NESTTSHED-FGTNEARIERKRLRKPHIT 376 + T H +G NE R E + + ++T Sbjct: 312 RGKLQTRHSHLYGENENRDEGNKPSQENLT 341 >SB_23579| Best HMM Match : PspA_IM30 (HMM E-Value=1.5) Length = 207 Score = 29.1 bits (62), Expect = 8.5 Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 1/132 (0%) Query: 264 KLITQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHF 323 K++ + + R ++ R D+ L K D E +D KL Sbjct: 23 KIVQMVNNTARVTRKDARDTEASCVDVSLSVRKKNMDILHLNDEVKRYEKLLAMDRKLPR 82 Query: 324 KSIFTSSTASRDDKLAKIHEEIEPFNESTTSHEDFGTNEARIERKRLRKPHITMERTFTK 383 +SI + +L E+E ++ + E R E K+ +K + ++ T + Sbjct: 83 RSILEERLGRAEAELEHKDRELENLHKQVVVADKKAAREIRKENKKYQKLQVEVQGTVNE 142 Query: 384 -DKITDPIEKLE 394 D++ I+ E Sbjct: 143 CDELKSRIKDAE 154 >SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1601 Score = 29.1 bits (62), Expect = 8.5 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 5/90 (5%) Query: 209 RLNLTLGQTLSTLTEVTEPVRPEMLNVCNSLQKQFNSWFPDQDTGDSDDSNE-KSRKLIT 267 RLN T +T+T +EP P++ +S+Q+ ++ P Q+ G + ++ + KS ++ Sbjct: 435 RLNDGSVHTSTTITPASEPDMPQIQRTDSSVQRMESNQAPVQNFGQAAETTQGKSEGQLS 494 Query: 268 QMGLSPRFNKRSRRRCAEFVGDIELRSHPK 297 SP+ N+ E +E S P+ Sbjct: 495 ----SPQHNEEHPDHQGEDSNKVEQLSTPQ 520 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.314 0.129 0.385 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,666,585 Number of Sequences: 59808 Number of extensions: 715650 Number of successful extensions: 1762 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 1751 Number of HSP's gapped (non-prelim): 30 length of query: 490 length of database: 16,821,457 effective HSP length: 85 effective length of query: 405 effective length of database: 11,737,777 effective search space: 4753799685 effective search space used: 4753799685 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (22.0 bits) S2: 62 (29.1 bits)
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