Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001489-TA|BGIBMGA001489-PA|undefined
(490 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X96744-1|CAA65521.1| 518|Homo sapiens PAX7 protein. 35 0.75
BC121166-1|AAI21167.1| 518|Homo sapiens paired box gene 7 protein. 35 0.75
BC121165-1|AAI21166.1| 518|Homo sapiens paired box gene 7 protein. 35 0.75
BC031210-1|AAH31210.1| 521|Homo sapiens male-specific lethal 3-... 35 0.75
AF117065-1|AAD38499.1| 521|Homo sapiens male-specific lethal-3 ... 35 0.75
Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated microtub... 33 2.3
BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein pr... 33 2.3
AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein. 33 2.3
Z35141-1|CAA84513.1| 467|Homo sapiens PAX7 paired box containin... 32 4.0
X96744-2|CAA65522.1| 520|Homo sapiens PAX7 protein. 32 4.0
X96743-1|CAA65520.1| 520|Homo sapiens paired box containing tra... 32 4.0
DQ322591-1|ABC48797.1| 505|Homo sapiens PAX7 transcriptional fa... 32 4.0
AL021528-1|CAA16432.1| 520|Homo sapiens paired box gene 7 protein. 32 4.0
M74088-1|AAA03586.1| 2843|Homo sapiens APC protein. 31 6.9
M73548-2|AAA60354.1| 2743|Homo sapiens polyposis locus-encoded p... 31 6.9
M73548-1|AAA60353.1| 2844|Homo sapiens polyposis locus-encoded p... 31 6.9
BC008068-1|AAH08068.1| 388|Homo sapiens invasion inhibitory pro... 31 6.9
AK024020-1|BAB14781.1| 388|Homo sapiens protein ( Homo sapiens ... 31 6.9
L14837-1|AAA02891.1| 1736|Homo sapiens tight junction (zonula oc... 31 9.2
DQ015919-1|AAY22179.1| 1748|Homo sapiens tight junction protein ... 31 9.2
BC111712-1|AAI11713.1| 1748|Homo sapiens tight junction protein ... 31 9.2
AL096840-10|CAI19089.1| 388|Homo sapiens ankyrin repeat domain ... 31 9.2
>X96744-1|CAA65521.1| 518|Homo sapiens PAX7 protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.75
Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 3/133 (2%)
Query: 230 PEMLNVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVGD 289
P + ++ L+ +F + + +D EK K L + N+ E D
Sbjct: 149 PSVSSISRVLRIKFGKKEEEDEADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPD 208
Query: 290 IELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFN 349
+ L+ +KQ + +T LE ++ E+ H+ I+T ++ KL + ++ N
Sbjct: 209 LPLK---RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSN 265
Query: 350 ESTTSHEDFGTNE 362
+ G N+
Sbjct: 266 RRARWRKQAGANQ 278
>BC121166-1|AAI21167.1| 518|Homo sapiens paired box gene 7 protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.75
Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 3/133 (2%)
Query: 230 PEMLNVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVGD 289
P + ++ L+ +F + + +D EK K L + N+ E D
Sbjct: 149 PSVSSISRVLRIKFGKKEEEDEADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPD 208
Query: 290 IELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFN 349
+ L+ +KQ + +T LE ++ E+ H+ I+T ++ KL + ++ N
Sbjct: 209 LPLK---RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSN 265
Query: 350 ESTTSHEDFGTNE 362
+ G N+
Sbjct: 266 RRARWRKQAGANQ 278
>BC121165-1|AAI21166.1| 518|Homo sapiens paired box gene 7 protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.75
Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 3/133 (2%)
Query: 230 PEMLNVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVGD 289
P + ++ L+ +F + + +D EK K L + N+ E D
Sbjct: 149 PSVSSISRVLRIKFGKKEEEDEADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPD 208
Query: 290 IELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFN 349
+ L+ +KQ + +T LE ++ E+ H+ I+T ++ KL + ++ N
Sbjct: 209 LPLK---RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSN 265
Query: 350 ESTTSHEDFGTNE 362
+ G N+
Sbjct: 266 RRARWRKQAGANQ 278
>BC031210-1|AAH31210.1| 521|Homo sapiens male-specific lethal
3-like 1 (Drosophila) protein.
Length = 521
Score = 34.7 bits (76), Expect = 0.75
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Query: 230 PEMLNVCNSLQKQFNSWFP-DQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVG 288
PE L N + ++ W D D+D++ RKL + R R ++RC
Sbjct: 50 PEYLIHFNGWNRSWDRWAAEDHVLRDTDENRRLQRKLARKAVARLRSTGRKKKRCRLPGV 109
Query: 289 DIELRSHP-KKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIE 346
D L+ P +++D+ + + S + + DE++ +S T +++ + E+E
Sbjct: 110 DSVLKGLPTEEKDENDENSLSSSSDCSENKDEEISEESDIEEKTEVKEEPELQTRREME 168
>AF117065-1|AAD38499.1| 521|Homo sapiens male-specific lethal-3
homolog 1 protein.
Length = 521
Score = 34.7 bits (76), Expect = 0.75
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Query: 230 PEMLNVCNSLQKQFNSWFP-DQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVG 288
PE L N + ++ W D D+D++ RKL + R R ++RC
Sbjct: 50 PEYLIHFNGWNRSWDRWAAEDHVLRDTDENRRLQRKLARKAVARLRSTGRKKKRCRLPGV 109
Query: 289 DIELRSHP-KKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIE 346
D L+ P +++D+ + + S + + DE++ +S T +++ + E+E
Sbjct: 110 DSVLKGLPTEEKDENDENSLSSSSDCSENKDEEISEESDIEEKTEVKEEPELQTRREME 168
>Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated
microtubule-binding protein protein.
Length = 1979
Score = 33.1 bits (72), Expect = 2.3
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 291 ELRSHPKKQD---KQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEP 347
EL+ + ++ D K+T + SLE QK+L + ++ K IF R KL EE++
Sbjct: 777 ELKKNIEQMDTDHKETKDVLSSSLEEQKQLTQLINKKEIFIEKLKERSSKL---QEELDK 833
Query: 348 FNESTTSHE 356
++++ +E
Sbjct: 834 YSQALRKNE 842
>BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein
protein.
Length = 1694
Score = 33.1 bits (72), Expect = 2.3
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 291 ELRSHPKKQD---KQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEP 347
EL+ + ++ D K+T + SLE QK+L + ++ K IF R KL EE++
Sbjct: 492 ELKKNIEQMDTDHKETKDVLSSSLEEQKQLTQLINKKEIFIEKLKERSSKL---QEELDK 548
Query: 348 FNESTTSHE 356
++++ +E
Sbjct: 549 YSQALRKNE 557
>AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein.
Length = 1978
Score = 33.1 bits (72), Expect = 2.3
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 291 ELRSHPKKQD---KQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEP 347
EL+ + ++ D K+T + SLE QK+L + ++ K IF R KL EE++
Sbjct: 777 ELKKNIEQMDTDHKETKDVLSSSLEEQKQLTQLINKKEIFIEKLKERSSKL---QEELDK 833
Query: 348 FNESTTSHE 356
++++ +E
Sbjct: 834 YSQALRKNE 842
>Z35141-1|CAA84513.1| 467|Homo sapiens PAX7 paired box containing
transcription factor protein.
Length = 467
Score = 32.3 bits (70), Expect = 4.0
Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 3/129 (2%)
Query: 234 NVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVGDIELR 293
++ L+ +F + + +D EK K L + N+ E D+ L+
Sbjct: 155 SISRVLRIKFGKKEEEDEADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLK 214
Query: 294 SHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTT 353
+KQ + +T LE ++ E+ H+ I+T ++ KL + ++ N
Sbjct: 215 ---RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 271
Query: 354 SHEDFGTNE 362
+ G N+
Sbjct: 272 WRKQAGANQ 280
>X96744-2|CAA65522.1| 520|Homo sapiens PAX7 protein.
Length = 520
Score = 32.3 bits (70), Expect = 4.0
Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 3/129 (2%)
Query: 234 NVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVGDIELR 293
++ L+ +F + + +D EK K L + N+ E D+ L+
Sbjct: 155 SISRVLRIKFGKKEEEDEADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLK 214
Query: 294 SHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTT 353
+KQ + +T LE ++ E+ H+ I+T ++ KL + ++ N
Sbjct: 215 ---RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 271
Query: 354 SHEDFGTNE 362
+ G N+
Sbjct: 272 WRKQAGANQ 280
>X96743-1|CAA65520.1| 520|Homo sapiens paired box containing
transcription factor protein.
Length = 520
Score = 32.3 bits (70), Expect = 4.0
Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 3/129 (2%)
Query: 234 NVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVGDIELR 293
++ L+ +F + + +D EK K L + N+ E D+ L+
Sbjct: 155 SISRVLRIKFGKKEEEDEADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLK 214
Query: 294 SHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTT 353
+KQ + +T LE ++ E+ H+ I+T ++ KL + ++ N
Sbjct: 215 ---RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 271
Query: 354 SHEDFGTNE 362
+ G N+
Sbjct: 272 WRKQAGANQ 280
>DQ322591-1|ABC48797.1| 505|Homo sapiens PAX7 transcriptional
factor isoform B protein.
Length = 505
Score = 32.3 bits (70), Expect = 4.0
Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 3/129 (2%)
Query: 234 NVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVGDIELR 293
++ L+ +F + + +D EK K L + N+ E D+ L+
Sbjct: 155 SISRVLRIKFGKKEEEDEADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLK 214
Query: 294 SHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTT 353
+KQ + +T LE ++ E+ H+ I+T ++ KL + ++ N
Sbjct: 215 ---RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 271
Query: 354 SHEDFGTNE 362
+ G N+
Sbjct: 272 WRKQAGANQ 280
>AL021528-1|CAA16432.1| 520|Homo sapiens paired box gene 7 protein.
Length = 520
Score = 32.3 bits (70), Expect = 4.0
Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 3/129 (2%)
Query: 234 NVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVGDIELR 293
++ L+ +F + + +D EK K L + N+ E D+ L+
Sbjct: 155 SISRVLRIKFGKKEEEDEADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLK 214
Query: 294 SHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTT 353
+KQ + +T LE ++ E+ H+ I+T ++ KL + ++ N
Sbjct: 215 ---RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 271
Query: 354 SHEDFGTNE 362
+ G N+
Sbjct: 272 WRKQAGANQ 280
>M74088-1|AAA03586.1| 2843|Homo sapiens APC protein.
Length = 2843
Score = 31.5 bits (68), Expect = 6.9
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 14 TPKSPDPQ-TSWNYNVRKKHDVKGNLNVTKTLNDRPECSFTKEFGINDYNKQNRNKCDER 72
+P P PQ T + VRK D K NLN + +D + +K+ + + N ++ N D+
Sbjct: 1774 SPVKPIPQNTEYRTRVRKNADSKNNLNAERVFSDNKD---SKKQNLKN-NSKDFN--DKL 1827
Query: 73 TKNISPLKERVAFNREINCFTIVNRHFDYSDTSS----EYEDRDIELFAASGDINRETVN 128
N ++ AF+ + I + +S S +++D D++L ++ + N
Sbjct: 1828 PNNEDRVRGSFAFDSPHHYTPIEGTPYCFSRNDSLSSLDFDDDDVDLSREKAELRKAKEN 1887
>M73548-2|AAA60354.1| 2743|Homo sapiens polyposis locus-encoded
protein protein.
Length = 2743
Score = 31.5 bits (68), Expect = 6.9
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 14 TPKSPDPQ-TSWNYNVRKKHDVKGNLNVTKTLNDRPECSFTKEFGINDYNKQNRNKCDER 72
+P P PQ T + VRK D K NLN + +D + +K+ + + N ++ N D+
Sbjct: 1674 SPVKPIPQNTEYRTRVRKNADSKNNLNAERVFSDNKD---SKKQNLKN-NSKDFN--DKL 1727
Query: 73 TKNISPLKERVAFNREINCFTIVNRHFDYSDTSS----EYEDRDIELFAASGDINRETVN 128
N ++ AF+ + I + +S S +++D D++L ++ + N
Sbjct: 1728 PNNEDRVRGSFAFDSPHHYTPIEGTPYCFSRNDSLSSLDFDDDDVDLSREKAELRKAKEN 1787
>M73548-1|AAA60353.1| 2844|Homo sapiens polyposis locus-encoded
protein protein.
Length = 2844
Score = 31.5 bits (68), Expect = 6.9
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 14 TPKSPDPQ-TSWNYNVRKKHDVKGNLNVTKTLNDRPECSFTKEFGINDYNKQNRNKCDER 72
+P P PQ T + VRK D K NLN + +D + +K+ + + N ++ N D+
Sbjct: 1775 SPVKPIPQNTEYRTRVRKNADSKNNLNAERVFSDNKD---SKKQNLKN-NSKDFN--DKL 1828
Query: 73 TKNISPLKERVAFNREINCFTIVNRHFDYSDTSS----EYEDRDIELFAASGDINRETVN 128
N ++ AF+ + I + +S S +++D D++L ++ + N
Sbjct: 1829 PNNEDRVRGSFAFDSPHHYTPIEGTPYCFSRNDSLSSLDFDDDDVDLSREKAELRKAKEN 1888
>BC008068-1|AAH08068.1| 388|Homo sapiens invasion inhibitory
protein 45 protein.
Length = 388
Score = 31.5 bits (68), Expect = 6.9
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 12 TLTPKSPDPQTSWNYNVRKKHD-VKGNLNVTKTLNDRPECSFTKEFGINDYNKQNRNKC 69
T + +S P+ SW +D + G+L+ + ++ +PE F+K + ++ + N+ +C
Sbjct: 158 TFSEESAVPERSWRLRPYLGYDWIAGSLDTSSSITSQPEAFFSK---LQEFRETNKEEC 213
>AK024020-1|BAB14781.1| 388|Homo sapiens protein ( Homo sapiens
cDNA FLJ13958 fis, clone Y79AA1001216. ).
Length = 388
Score = 31.5 bits (68), Expect = 6.9
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 12 TLTPKSPDPQTSWNYNVRKKHD-VKGNLNVTKTLNDRPECSFTKEFGINDYNKQNRNKC 69
T + +S P+ SW +D + G+L+ + ++ +PE F+K + ++ + N+ +C
Sbjct: 158 TFSEESAVPERSWRLRPYLGYDWIAGSLDTSSSITSQPEAFFSK---LQEFRETNKEEC 213
>L14837-1|AAA02891.1| 1736|Homo sapiens tight junction (zonula
occludens) protein ZO-1 protein.
Length = 1736
Score = 31.1 bits (67), Expect = 9.2
Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 6/154 (3%)
Query: 217 TLSTLTEVTEPV-RPEMLNVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRF 275
T+ +V PV RP+ V ++ + ++ D +G S N +S K+ + + R
Sbjct: 93 TIRRKKKVQIPVSRPDPEPVSDNEEDSYDEEIHDPRSGRSGVVNRRSEKIWPRDRSASRE 152
Query: 276 NKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRD 335
S R V S P K K T + + E RL + K I S A+RD
Sbjct: 153 RSLSPRSDRRSVAS----SQPAKPTKVTLVKSRKNEEYGLRLASHIFVKEISQDSLAARD 208
Query: 336 DKLAKIHEEIEPFNESTTSHEDFGTNEARIERKR 369
+ + + + N + T + + IER +
Sbjct: 209 GNIQE-GDVVLKINGTVTENMSLTDAKTLIERSK 241
>DQ015919-1|AAY22179.1| 1748|Homo sapiens tight junction protein 1
(zona occludens 1) protein.
Length = 1748
Score = 31.1 bits (67), Expect = 9.2
Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 6/154 (3%)
Query: 217 TLSTLTEVTEPV-RPEMLNVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRF 275
T+ +V PV RP+ V ++ + ++ D +G S N +S K+ + + R
Sbjct: 105 TIRRKKKVQIPVSRPDPEPVSDNEEDSYDEEIHDPRSGRSGVVNRRSEKIWPRDRSASRE 164
Query: 276 NKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRD 335
S R V S P K K T + + E RL + K I S A+RD
Sbjct: 165 RSLSPRSDRRSVAS----SQPAKPTKVTLVKSRKNEEYGLRLASHIFVKEISQDSLAARD 220
Query: 336 DKLAKIHEEIEPFNESTTSHEDFGTNEARIERKR 369
+ + + + N + T + + IER +
Sbjct: 221 GNIQE-GDVVLKINGTVTENMSLTDAKTLIERSK 253
>BC111712-1|AAI11713.1| 1748|Homo sapiens tight junction protein 1
(zona occludens 1) protein.
Length = 1748
Score = 31.1 bits (67), Expect = 9.2
Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 6/154 (3%)
Query: 217 TLSTLTEVTEPV-RPEMLNVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRF 275
T+ +V PV RP+ V ++ + ++ D +G S N +S K+ + + R
Sbjct: 105 TIRRKKKVQIPVSRPDPEPVSDNEEDSYDEEIHDPRSGRSGVVNRRSEKIWPRDRSASRE 164
Query: 276 NKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRD 335
S R V S P K K T + + E RL + K I S A+RD
Sbjct: 165 RSLSPRSDRRSVAS----SQPAKPTKVTLVKSRKNEEYGLRLASHIFVKEISQDSLAARD 220
Query: 336 DKLAKIHEEIEPFNESTTSHEDFGTNEARIERKR 369
+ + + + N + T + + IER +
Sbjct: 221 GNIQE-GDVVLKINGTVTENMSLTDAKTLIERSK 253
>AL096840-10|CAI19089.1| 388|Homo sapiens ankyrin repeat domain 38
protein.
Length = 388
Score = 31.1 bits (67), Expect = 9.2
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 12 TLTPKSPDPQTSWNYNVRKKHD-VKGNLNVTKTLNDRPECSFTKEFGINDYNKQNRNKC 69
T + +S P+ SW +D + G+L+ + ++ +PE F+K + ++ + N+ +C
Sbjct: 158 TFSEESAVPKRSWRLRPYLGYDWIAGSLDTSSSITSQPEAFFSK---LQEFRETNKEEC 213
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.314 0.129 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,860,126
Number of Sequences: 224733
Number of extensions: 2796416
Number of successful extensions: 5217
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 5217
Number of HSP's gapped (non-prelim): 22
length of query: 490
length of database: 73,234,838
effective HSP length: 93
effective length of query: 397
effective length of database: 52,334,669
effective search space: 20776863593
effective search space used: 20776863593
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 67 (31.1 bits)
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