Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001489-TA|BGIBMGA001489-PA|undefined
(490 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical pr... 34 0.20
AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal ... 34 0.20
AF000266-5|AAC71172.1| 370|Caenorhabditis elegans Hypothetical ... 34 0.20
AF000266-4|ABB51177.1| 403|Caenorhabditis elegans Hypothetical ... 34 0.20
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 34 0.26
U42847-3|AAA83605.2| 210|Caenorhabditis elegans Hypothetical pr... 33 0.35
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 33 0.60
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 31 1.4
U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z81136-2|CAB03459.1| 743|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z81122-6|CAB03358.1| 663|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical p... 30 3.2
AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein. 30 3.2
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 30 4.2
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 30 4.2
Z66565-3|CAA91479.1| 177|Caenorhabditis elegans Hypothetical pr... 29 7.4
U97013-6|AAB52337.1| 221|Caenorhabditis elegans Hypothetical pr... 29 9.8
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 29 9.8
AF040653-6|AAB95027.2| 334|Caenorhabditis elegans Hypothetical ... 29 9.8
AF039047-14|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 29 9.8
AF039047-13|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 29 9.8
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 29 9.8
>Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical
protein F26D2.2 protein.
Length = 489
Score = 34.3 bits (75), Expect = 0.20
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 38 LNVTKTLNDRPECSFTKEFGINDYNKQNRNKCDERTKNISPLKERVAFNREINCFTIVNR 97
L +KT +D E + INDY+KQ ++ E K + +KE+ A N + TI
Sbjct: 356 LQSSKTESDLEEEISAMQLEINDYDKQIKDAAKEHEKLFNQIKEQRAANGDQFNDTIDIV 415
Query: 98 HFDYSD 103
DYSD
Sbjct: 416 ESDYSD 421
>AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal
complex protein SYP-1 protein.
Length = 489
Score = 34.3 bits (75), Expect = 0.20
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 38 LNVTKTLNDRPECSFTKEFGINDYNKQNRNKCDERTKNISPLKERVAFNREINCFTIVNR 97
L +KT +D E + INDY+KQ ++ E K + +KE+ A N + TI
Sbjct: 356 LQSSKTESDLEEEISAMQLEINDYDKQIKDAAKEHEKLFNQIKEQRAANGDQFNDTIDIV 415
Query: 98 HFDYSD 103
DYSD
Sbjct: 416 ESDYSD 421
>AF000266-5|AAC71172.1| 370|Caenorhabditis elegans Hypothetical
protein W08F4.8a protein.
Length = 370
Score = 34.3 bits (75), Expect = 0.20
Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 11/157 (7%)
Query: 243 FNSWFPDQDTGDSDDSNEK-SRKLITQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQD- 300
++ W + + D DD++ + + R + + ++ + D E + KK +
Sbjct: 5 YSKWKDIEVSDDEDDTHPNIDTPSLFRWRHQARLERMAEKKMEQEKIDKEKGTTSKKMEE 64
Query: 301 ---KQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTTSHED 357
K + ++QK++DE + + A ++K E +EP+N T HE
Sbjct: 65 LEKKLAAADVTDKSDIQKQIDEVKAQEEAWRKKEAELEEK-----ERLEPWNVDTIGHEA 119
Query: 358 FGTNEA-RIERKRLRKPHITMERTFTKDKITDPIEKL 393
F T+ +I K+ + P E T + E L
Sbjct: 120 FSTSRINKITEKKPQAPKTDEEDTHAMSTFFETHESL 156
>AF000266-4|ABB51177.1| 403|Caenorhabditis elegans Hypothetical
protein W08F4.8b protein.
Length = 403
Score = 34.3 bits (75), Expect = 0.20
Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 11/157 (7%)
Query: 243 FNSWFPDQDTGDSDDSNEK-SRKLITQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQD- 300
++ W + + D DD++ + + R + + ++ + D E + KK +
Sbjct: 38 YSKWKDIEVSDDEDDTHPNIDTPSLFRWRHQARLERMAEKKMEQEKIDKEKGTTSKKMEE 97
Query: 301 ---KQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTTSHED 357
K + ++QK++DE + + A ++K E +EP+N T HE
Sbjct: 98 LEKKLAAADVTDKSDIQKQIDEVKAQEEAWRKKEAELEEK-----ERLEPWNVDTIGHEA 152
Query: 358 FGTNEA-RIERKRLRKPHITMERTFTKDKITDPIEKL 393
F T+ +I K+ + P E T + E L
Sbjct: 153 FSTSRINKITEKKPQAPKTDEEDTHAMSTFFETHESL 189
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 33.9 bits (74), Expect = 0.26
Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 225 TEPVRPEMLNVCNSLQKQFNSWFPDQDTGDSDDSNEK-SRKLITQMGLSPRFNKRSRRRC 283
+ P+ P + CN+L+++ + F + D + + EK +R L + + + + +RR+
Sbjct: 400 SSPLIPPTPSACNTLERRSRA-FEHEMPEDRETALEKLNRSLHNRREMEKQKAEEARRKE 458
Query: 284 AEFVGDI--------ELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTAS-- 333
AE + +I E R ++++++ + + +KR + ++ F S T S
Sbjct: 459 AERIEEIERMRQQAEERRRREREEEERRKREEEEAEKQRKREEREVRFSKNDISPTTSSG 518
Query: 334 -RDDKLAKIHEEIEPFNESTTSHEDFGTN 361
DDK A + + HE F N
Sbjct: 519 VADDKKATMRRRHDEARRRQLEHEQFTAN 547
>U42847-3|AAA83605.2| 210|Caenorhabditis elegans Hypothetical
protein F39H12.3 protein.
Length = 210
Score = 33.5 bits (73), Expect = 0.35
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 284 AEFVGDIELRSHPKKQDKQTSTTANPSLE-VQKRLDEKLHFKSIFTSSTASRDDKLA-KI 341
A F G + +R+HP+K T T+++ L+ + D+K H +T + +D+ A KI
Sbjct: 90 AAFKGHL-VRAHPEKYGMSTRTSSSEKLDSANNKKDQKRHSVGGYTIDVDTPEDRAATKI 148
Query: 342 HEEIEPFNESTTSHED 357
EI F T H D
Sbjct: 149 QSEIRGF--LTRKHVD 162
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 32.7 bits (71), Expect = 0.60
Identities = 31/146 (21%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 259 NEKSRKLITQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQDKQTSTTANPSLEVQKRLD 318
+EK +++T+ + R E G +Q + +T +Q+++D
Sbjct: 819 SEKDNEVLTKAERINELETCLKEREVELTGMRTKLDDMTQQLNEETTVVLFDNSIQEKID 878
Query: 319 EKLHFKSIFTSSTASRDDKLAKIHEEI-------EPFNESTTS-HEDFGTNEARIERKRL 370
EK + SR++++AK+HEE+ E NE + ++ + ++E ++
Sbjct: 879 EKEATINEMNERLKSRENEIAKLHEEMYMQKTQNEKRNEEQSKLFQELMFEKEQLEAEKA 938
Query: 371 RKPHI--TMERTFTKDKITDPIEKLE 394
+ HI +E+ F DK + E++E
Sbjct: 939 EQSHIEAEVEQVFQADKESKWKEQIE 964
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 281 RRCAEFVG-DIELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTAS 333
R A+ +G ++ +RS PK D+ ST + V K L+ K F S F SS AS
Sbjct: 130 RTPAKSIGSEVVMRSEPKAIDRTPSTIISDPAPVLKALETK--FSSTFASSAAS 181
>U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical
protein F33G12.5 protein.
Length = 928
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/81 (19%), Positives = 41/81 (50%)
Query: 291 ELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNE 350
E + + +++Q+S + L +K L+++ + + D+L I++++E N+
Sbjct: 682 ETKVPEEAENQQSSRELHEDLWARKELEKRFARAMLQNAELVETIDRLEHINQQLELEND 741
Query: 351 STTSHEDFGTNEARIERKRLR 371
+ H ++ ++ R+RLR
Sbjct: 742 TIADHVVLYQHQRKLVRERLR 762
>Z81136-2|CAB03459.1| 743|Caenorhabditis elegans Hypothetical
protein W02B8.3 protein.
Length = 743
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 268 QMGLSPRFNKRSRRRCAEFVGDIELRSHPK-KQDKQTSTTANPSLEVQKRLDEKLHFKSI 326
++ L +++K+ +C+ DI SH K D ++ N L+ +K D+K
Sbjct: 83 RLNLVEKYDKKKHEKCSSKAHDIT--SHAKCLVDLESDGLKNRLLKRKKYFDQKTRSSIE 140
Query: 327 FTSSTASRDDKLAKIHEEIEPFNESTTSHE 356
S T + DKL K+ +E + S ++ +
Sbjct: 141 KKSRTTKKSDKLKKL-RSMESYEASKSAEK 169
>Z81122-6|CAB03358.1| 663|Caenorhabditis elegans Hypothetical
protein T13F2.7 protein.
Length = 663
Score = 30.7 bits (66), Expect = 2.4
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 308 NPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFNESTTSHEDF-GTNEARIE 366
+P+L KR+ ++ S AS+ K + + S++S EDF G +AR
Sbjct: 526 SPTLAAVKRILDEGEIDSDEEKQQASKSKKKKPATSDSSD-STSSSSEEDFDGPVDARKR 584
Query: 367 RKRLRKPHITMERTFTKDKITDP 389
RK RK RT T + DP
Sbjct: 585 RKLRRKKDRKNPRTTTASSLLDP 607
>Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical
protein T09A5.10 protein.
Length = 821
Score = 30.3 bits (65), Expect = 3.2
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 287 VGDIELRSHPKKQDKQTSTTA-NPSLEVQKRLDEKLHFKSIFTSSTA-SRDDKLAKIHEE 344
V ++ + S KQD S T + L + +KL + + S A SR D L H E
Sbjct: 398 VEELSVASLRNKQDADNSKTMLSEELARFEETVDKLRQEKLEALSMANSRIDALRLEHSE 457
Query: 345 IEPFNESTTSHEDFGTNEARIERKRL 370
E +ST + +E R E+KRL
Sbjct: 458 REKMMKSTNARLQADLDEERNEKKRL 483
>AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein.
Length = 821
Score = 30.3 bits (65), Expect = 3.2
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 287 VGDIELRSHPKKQDKQTSTTA-NPSLEVQKRLDEKLHFKSIFTSSTA-SRDDKLAKIHEE 344
V ++ + S KQD S T + L + +KL + + S A SR D L H E
Sbjct: 398 VEELSVASLRNKQDADNSKTMLSEELARFEETVDKLRQEKLEALSMANSRIDALRLEHSE 457
Query: 345 IEPFNESTTSHEDFGTNEARIERKRL 370
E +ST + +E R E+KRL
Sbjct: 458 REKMMKSTNARLQADLDEERNEKKRL 483
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 290 IELRSHPKKQDKQTSTTANPSLEVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIEPFN 349
IE K+++KQT+T N ++ ++L++K + + ++S+ +LA++ EE+
Sbjct: 61 IERLEDVKQRNKQTATLYNNYSKLAEQLEKKHKYGTSSSNSSQLETGELARVKEEMAELY 120
Query: 350 ESTTSHE 356
S ++
Sbjct: 121 RSKCQND 127
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 29.9 bits (64), Expect = 4.2
Identities = 31/152 (20%), Positives = 59/152 (38%), Gaps = 1/152 (0%)
Query: 228 VRPEMLNVCNSLQKQFNSWFPDQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFV 287
++P + NV + ++ +++ ++ EKS+K + K ++ +
Sbjct: 45 MKPPVENVKSKKSEKKEEPKKEEEPKKEEEKKEKSKKSEKKDDKKEEAKKEDDKKDEKKD 104
Query: 288 GDIELRSHPKKQDKQTSTTANPSL-EVQKRLDEKLHFKSIFTSSTASRDDKLAKIHEEIE 346
E + KK DK+ E +K D+K K S + + K K EE +
Sbjct: 105 EKKEDKKDDKKDDKKEEKKEEKKEDEKEKGDDKKEDEKDDKKSGSKDAEKKEEKKEEEKK 164
Query: 347 PFNESTTSHEDFGTNEARIERKRLRKPHITME 378
+ E + E+K KPHIT++
Sbjct: 165 EEKKEEKKEEKKEDEKKEDEKKEEPKPHITID 196
>Z66565-3|CAA91479.1| 177|Caenorhabditis elegans Hypothetical
protein T04F8.3 protein.
Length = 177
Score = 29.1 bits (62), Expect = 7.4
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 334 RDDKLAKIH---EEIEPFNESTTSHEDFGTNEARIERKRLRKPHITMERTFTKDK 385
RD AK + EI+ F + +D +E IE +++ + H+T++ FTK++
Sbjct: 70 RDKYAAKYNIFPHEIDMFYDDKEVFDDDTCSEIGIEHEQIIRMHVTIDTLFTKNR 124
>U97013-6|AAB52337.1| 221|Caenorhabditis elegans Hypothetical
protein F28H1.1 protein.
Length = 221
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/52 (26%), Positives = 20/52 (38%)
Query: 96 NRHFDYSDTSSEYEDRDIELFAASGDINRETVNWNQDHYQKTMNAFNTKDHE 147
N H Y E D ++F+ G N E Q H Q N + + H+
Sbjct: 53 NYHHPYEVKPFEAIDEKNDVFSTMGHWNSEQKQSRQQHQQYQQNQYQARQHQ 104
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 28.7 bits (61), Expect = 9.8
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 11/135 (8%)
Query: 249 DQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQD----KQTS 304
D+ + D KS+K + Q KR+ + D E KK+ KQTS
Sbjct: 93 DESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTS 152
Query: 305 TTANPSLEVQKRL------DEKLHFKSIFTSSTASRDDKLAKIHEE-IEPFNESTTSHED 357
+ ++ E ++++ EK K TS + D+K +K ++ ++ +S + E
Sbjct: 153 SESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESES 212
Query: 358 FGTNEARIERKRLRK 372
E + +K+ +K
Sbjct: 213 EDEKEVKKSKKKSKK 227
>AF040653-6|AAB95027.2| 334|Caenorhabditis elegans Hypothetical
protein K05F6.7 protein.
Length = 334
Score = 28.7 bits (61), Expect = 9.8
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 101 YSDTSSEYEDRDIEL-FAASGDINRETVNWNQDHYQKTMNAFNTKDHEKTIWIYSYKNKN 159
+S S + +D EL A S + E +WN+ +N +H++ W+ SYKNK
Sbjct: 32 FSMVSQKTKDFTRELCIAGSSQLFIELTDWNE---------YNISNHDELSWMCSYKNKE 82
Query: 160 L 160
+
Sbjct: 83 V 83
>AF039047-14|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform a
protein.
Length = 1040
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 104 TSSEYEDRDIELFAASGDINRE 125
T E+E R +L+A SGDINR+
Sbjct: 483 TKEEFEKRFHDLYAGSGDINRK 504
>AF039047-13|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 104 TSSEYEDRDIELFAASGDINRE 125
T E+E R +L+A SGDINR+
Sbjct: 483 TKEEFEKRFHDLYAGSGDINRK 504
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 28.7 bits (61), Expect = 9.8
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 11/135 (8%)
Query: 249 DQDTGDSDDSNEKSRKLITQMGLSPRFNKRSRRRCAEFVGDIELRSHPKKQD----KQTS 304
D+ + D KS+K + Q KR+ + D E KK+ KQTS
Sbjct: 93 DESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTS 152
Query: 305 TTANPSLEVQKRL------DEKLHFKSIFTSSTASRDDKLAKIHEE-IEPFNESTTSHED 357
+ ++ E ++++ EK K TS + D+K +K ++ ++ +S + E
Sbjct: 153 SESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESES 212
Query: 358 FGTNEARIERKRLRK 372
E + +K+ +K
Sbjct: 213 EDEKEVKKSKKKSKK 227
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.129 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,519,426
Number of Sequences: 27539
Number of extensions: 549162
Number of successful extensions: 1358
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1342
Number of HSP's gapped (non-prelim): 25
length of query: 490
length of database: 12,573,161
effective HSP length: 84
effective length of query: 406
effective length of database: 10,259,885
effective search space: 4165513310
effective search space used: 4165513310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
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