Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001488-TA|BGIBMGA001488-PA|IPR001766|Fork head
transcription factor
(315 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 94 2e-20
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 93 5e-20
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 88 1e-18
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 81 2e-16
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 35 0.017
SPCC1450.03 |||ribonucleoprotein |Schizosaccharomyces pombe|chr ... 27 2.6
SPAC1399.01c |||purine permease |Schizosaccharomyces pombe|chr 1... 27 2.6
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 27 3.5
SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces pombe... 27 3.5
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 27 3.5
SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces ... 27 4.6
SPBC13E7.08c |||RNA polymerase II associated Paf1 complex |Schiz... 26 6.1
SPBC216.01c ||SPBC713.13c|DNA damage response protein |Schizosac... 26 8.0
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 94.3 bits (224), Expect = 2e-20
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 76 KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
KP +SY LI M+I+ SP+R+L LS IY I + + ++ GW+NSIRHNLSLN F+
Sbjct: 128 KPPYSYAMLIGMSIIRSPDRRLTLSAIYDWISNTFSFYNKSNNGWQNSIRHNLSLNKAFM 187
Query: 136 KAGRSAN--GKGHYWAIHPANVEDFRKGDFRR 165
K R N GKGH+W+I P + E F K R+
Sbjct: 188 KIERPRNLPGKGHFWSIRPGHEEQFLKLKLRK 219
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 93.1 bits (221), Expect = 5e-20
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 76 KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
KP SY LIA ++++P +K+ L DI + I +N+ Y+R + P W NSIRHNLSLN F+
Sbjct: 291 KPNLSYANLIARTLIANPNKKMTLGDICEWIANNWSYYRHQPPAWHNSIRHNLSLNKAFI 350
Query: 136 KAGRSAN--GKGHYWAIHPANVEDFRKGDFRRRK 167
+ R N GKG +W + P+ ++ F FRR K
Sbjct: 351 RIPRRQNEPGKGSFWMLDPSYIDQFEGNFFRRTK 384
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 88.2 bits (209), Expect = 1e-18
Identities = 49/101 (48%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 73 EEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLND 132
+ KP +SY +IA AILSS E + LS+IY I +YPY+RT GW+NSIRHNLSLN
Sbjct: 220 DNKKPPYSYSVMIAQAILSSSECMMTLSNIYSWISTHYPYYRTTKSGWQNSIRHNLSLNK 279
Query: 133 CFVKAGRSA--NGKGHYWAIHPANVEDFRKGDFRRRKAQRK 171
F K R + GKG W+I P E+F + RK RK
Sbjct: 280 AFRKVPRKSGEQGKGMKWSIVPEFREEFIA---KTRKTPRK 317
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 81.4 bits (192), Expect = 2e-16
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 76 KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
KP SY LI +AIL S ++L LS IY I + + Y+ GW+NSIRHNLSLN F+
Sbjct: 81 KPPCSYATLIGLAILQSHNKQLTLSGIYTWIRNTFRYYLNHDGGWQNSIRHNLSLNKAFI 140
Query: 136 KAGRSANG--KGHYWAIHPANVEDF 158
K + KGHYW I P ++++F
Sbjct: 141 KVEKPKGKTLKGHYWTIDPDHMQNF 165
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 34.7 bits (76), Expect = 0.017
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 225 SLLAPDETPEKRQRRDSSCDEEPEEDIDVV-----ASDQEERGV-DEETRGPLTTATQYP 278
SL A E P + Q + S +E+ +EDID + + DQEE V +EE+ GP A P
Sbjct: 103 SLSASHEKPARPQTGEGSDNEDEDEDIDALIEDLYSQDQEEEQVEEEESPGPAGAAKVVP 162
>SPCC1450.03 |||ribonucleoprotein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 240
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 234 EKRQRR--DSSCDEEPEEDIDVVASDQEERGVDEE 266
E RQRR SS D E EE+ D + D +E G D E
Sbjct: 121 EMRQRRLDFSSEDGEEEEENDYIDEDVDEAGYDIE 155
>SPAC1399.01c |||purine permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 16 APTVTAAAIDHYRLQLYNYAVAERLRLYPPTVAPCYGPYGPRLALSM 62
AP VT + +RL++Y AV L LY + G G +SM
Sbjct: 322 APVVTFNWVHTFRLRIYGPAVLPMLALYIVNMMEAIGDIGATSDVSM 368
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.1 bits (57), Expect = 3.5
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 207 AARLAGGGQPRKRQFDVASLLAPDETPEKRQRRDSSCDEEPEED-IDVVASDQEERGVDE 265
AAR R+R ++ L ++ EK++ +D D +++ ID + Q+E VDE
Sbjct: 250 AAREKAREARRRRSAQNSAKLEKEKAKEKQKDKDQEQDTVSDKNQIDEIEKGQKE--VDE 307
Query: 266 ETRGPLTTATQYPLL 280
E P++ T P+L
Sbjct: 308 E---PVSEPTTSPIL 319
>SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 233
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 222 DVASLLAPDETPEKRQRRDSSCDEEPEEDID 252
D+A+L P ++ +RDSS +++ ++D D
Sbjct: 203 DIAALKDPQNAEDELGKRDSSVNDDLDDDFD 233
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 230 DETPEKRQRRDSSCDEEPEEDIDVVASDQEERGVDEETR 268
+ T E R + S EE EE+ + ++EE D+ETR
Sbjct: 296 ESTAEPRAAGEESASEEEEEEEE---EEEEENEADDETR 331
>SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 495
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Query: 25 DHYR-LQLYNYAVAERLRLYPP 45
D Y+ + L NY + E LRL+PP
Sbjct: 331 DQYKDMPLLNYVIQETLRLHPP 352
>SPBC13E7.08c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 222 DVASLLAPDETPEKRQRRDSSCDEEPEEDIDVVASDQEERGVDEETRGPLTTAT 275
D+ +A +E E+++ EE EED + V + + +G D + + AT
Sbjct: 334 DLGDFIAEEEEEEEQEEEQ----EEDEEDEEEVGAGSDIKGFDADKEASVARAT 383
>SPBC216.01c ||SPBC713.13c|DNA damage response protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 836
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 217 RKRQFDVASLLAPDETPEKRQRRDSS 242
RK F V A DE+P+KR DSS
Sbjct: 803 RKSDFQVDDQQADDESPKKRLSIDSS 828
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.136 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,382,248
Number of Sequences: 5004
Number of extensions: 57671
Number of successful extensions: 207
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 191
Number of HSP's gapped (non-prelim): 14
length of query: 315
length of database: 2,362,478
effective HSP length: 73
effective length of query: 242
effective length of database: 1,997,186
effective search space: 483319012
effective search space used: 483319012
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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