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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001488-TA|BGIBMGA001488-PA|IPR001766|Fork head
transcription factor
         (315 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc...    94   2e-20
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1...    93   5e-20
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos...    88   1e-18
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S...    81   2e-16
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo...    35   0.017
SPCC1450.03 |||ribonucleoprotein |Schizosaccharomyces pombe|chr ...    27   2.6  
SPAC1399.01c |||purine permease |Schizosaccharomyces pombe|chr 1...    27   2.6  
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|...    27   3.5  
SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces pombe...    27   3.5  
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun...    27   3.5  
SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces ...    27   4.6  
SPBC13E7.08c |||RNA polymerase II associated Paf1 complex |Schiz...    26   6.1  
SPBC216.01c ||SPBC713.13c|DNA damage response protein |Schizosac...    26   8.0  

>SPBC4C3.12 |sep1||fork head transcription factor
           Sep1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 663

 Score = 94.3 bits (224), Expect = 2e-20
 Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 2/92 (2%)

Query: 76  KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
           KP +SY  LI M+I+ SP+R+L LS IY  I + + ++     GW+NSIRHNLSLN  F+
Sbjct: 128 KPPYSYAMLIGMSIIRSPDRRLTLSAIYDWISNTFSFYNKSNNGWQNSIRHNLSLNKAFM 187

Query: 136 KAGRSAN--GKGHYWAIHPANVEDFRKGDFRR 165
           K  R  N  GKGH+W+I P + E F K   R+
Sbjct: 188 KIERPRNLPGKGHFWSIRPGHEEQFLKLKLRK 219


>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 743

 Score = 93.1 bits (221), Expect = 5e-20
 Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 2/94 (2%)

Query: 76  KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
           KP  SY  LIA  ++++P +K+ L DI + I +N+ Y+R + P W NSIRHNLSLN  F+
Sbjct: 291 KPNLSYANLIARTLIANPNKKMTLGDICEWIANNWSYYRHQPPAWHNSIRHNLSLNKAFI 350

Query: 136 KAGRSAN--GKGHYWAIHPANVEDFRKGDFRRRK 167
           +  R  N  GKG +W + P+ ++ F    FRR K
Sbjct: 351 RIPRRQNEPGKGSFWMLDPSYIDQFEGNFFRRTK 384


>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 642

 Score = 88.2 bits (209), Expect = 1e-18
 Identities = 49/101 (48%), Positives = 61/101 (60%), Gaps = 5/101 (4%)

Query: 73  EEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLND 132
           +  KP +SY  +IA AILSS E  + LS+IY  I  +YPY+RT   GW+NSIRHNLSLN 
Sbjct: 220 DNKKPPYSYSVMIAQAILSSSECMMTLSNIYSWISTHYPYYRTTKSGWQNSIRHNLSLNK 279

Query: 133 CFVKAGRSA--NGKGHYWAIHPANVEDFRKGDFRRRKAQRK 171
            F K  R +   GKG  W+I P   E+F     + RK  RK
Sbjct: 280 AFRKVPRKSGEQGKGMKWSIVPEFREEFIA---KTRKTPRK 317


>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 517

 Score = 81.4 bits (192), Expect = 2e-16
 Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 2/85 (2%)

Query: 76  KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
           KP  SY  LI +AIL S  ++L LS IY  I + + Y+     GW+NSIRHNLSLN  F+
Sbjct: 81  KPPCSYATLIGLAILQSHNKQLTLSGIYTWIRNTFRYYLNHDGGWQNSIRHNLSLNKAFI 140

Query: 136 KAGRSANG--KGHYWAIHPANVEDF 158
           K  +      KGHYW I P ++++F
Sbjct: 141 KVEKPKGKTLKGHYWTIDPDHMQNF 165


>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1010

 Score = 34.7 bits (76), Expect = 0.017
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 6/60 (10%)

Query: 225 SLLAPDETPEKRQRRDSSCDEEPEEDIDVV-----ASDQEERGV-DEETRGPLTTATQYP 278
           SL A  E P + Q  + S +E+ +EDID +     + DQEE  V +EE+ GP   A   P
Sbjct: 103 SLSASHEKPARPQTGEGSDNEDEDEDIDALIEDLYSQDQEEEQVEEEESPGPAGAAKVVP 162


>SPCC1450.03 |||ribonucleoprotein |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 240

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 234 EKRQRR--DSSCDEEPEEDIDVVASDQEERGVDEE 266
           E RQRR   SS D E EE+ D +  D +E G D E
Sbjct: 121 EMRQRRLDFSSEDGEEEEENDYIDEDVDEAGYDIE 155


>SPAC1399.01c |||purine permease |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 601

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 16/47 (34%), Positives = 22/47 (46%)

Query: 16  APTVTAAAIDHYRLQLYNYAVAERLRLYPPTVAPCYGPYGPRLALSM 62
           AP VT   +  +RL++Y  AV   L LY   +    G  G    +SM
Sbjct: 322 APVVTFNWVHTFRLRIYGPAVLPMLALYIVNMMEAIGDIGATSDVSM 368


>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 341

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 207 AARLAGGGQPRKRQFDVASLLAPDETPEKRQRRDSSCDEEPEED-IDVVASDQEERGVDE 265
           AAR       R+R    ++ L  ++  EK++ +D   D   +++ ID +   Q+E  VDE
Sbjct: 250 AAREKAREARRRRSAQNSAKLEKEKAKEKQKDKDQEQDTVSDKNQIDEIEKGQKE--VDE 307

Query: 266 ETRGPLTTATQYPLL 280
           E   P++  T  P+L
Sbjct: 308 E---PVSEPTTSPIL 319


>SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 233

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 10/31 (32%), Positives = 20/31 (64%)

Query: 222 DVASLLAPDETPEKRQRRDSSCDEEPEEDID 252
           D+A+L  P    ++  +RDSS +++ ++D D
Sbjct: 203 DIAALKDPQNAEDELGKRDSSVNDDLDDDFD 233


>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
           Taf7|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 393

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 230 DETPEKRQRRDSSCDEEPEEDIDVVASDQEERGVDEETR 268
           + T E R   + S  EE EE+ +    ++EE   D+ETR
Sbjct: 296 ESTAEPRAAGEESASEEEEEEEE---EEEEENEADDETR 331


>SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 495

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)

Query: 25  DHYR-LQLYNYAVAERLRLYPP 45
           D Y+ + L NY + E LRL+PP
Sbjct: 331 DQYKDMPLLNYVIQETLRLHPP 352


>SPBC13E7.08c |||RNA polymerase II associated Paf1 complex
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 429

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 222 DVASLLAPDETPEKRQRRDSSCDEEPEEDIDVVASDQEERGVDEETRGPLTTAT 275
           D+   +A +E  E+++       EE EED + V +  + +G D +    +  AT
Sbjct: 334 DLGDFIAEEEEEEEQEEEQ----EEDEEDEEEVGAGSDIKGFDADKEASVARAT 383


>SPBC216.01c ||SPBC713.13c|DNA damage response protein
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 836

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 217 RKRQFDVASLLAPDETPEKRQRRDSS 242
           RK  F V    A DE+P+KR   DSS
Sbjct: 803 RKSDFQVDDQQADDESPKKRLSIDSS 828


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.136    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,382,248
Number of Sequences: 5004
Number of extensions: 57671
Number of successful extensions: 207
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 191
Number of HSP's gapped (non-prelim): 14
length of query: 315
length of database: 2,362,478
effective HSP length: 73
effective length of query: 242
effective length of database: 1,997,186
effective search space: 483319012
effective search space used: 483319012
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)

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