Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001488-TA|BGIBMGA001488-PA|IPR001766|Fork head
transcription factor
(315 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5069| Best HMM Match : Fork_head (HMM E-Value=0) 169 3e-42
SB_10139| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 5e-40
SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 1e-38
SB_14691| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 8e-31
SB_38328| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 5e-27
SB_13048| Best HMM Match : Fork_head (HMM E-Value=0) 117 1e-26
SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-26
SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.) 115 4e-26
SB_15898| Best HMM Match : Fork_head (HMM E-Value=0) 112 3e-25
SB_34638| Best HMM Match : Fork_head (HMM E-Value=0) 111 9e-25
SB_47058| Best HMM Match : Fork_head (HMM E-Value=0) 111 9e-25
SB_51547| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 2e-24
SB_32062| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_5331| Best HMM Match : Fork_head (HMM E-Value=0) 103 2e-22
SB_3400| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 3e-22
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_12905| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_53442| Best HMM Match : Fork_head (HMM E-Value=0) 93 2e-19
SB_15500| Best HMM Match : Fork_head (HMM E-Value=1.7e-39) 93 2e-19
SB_10836| Best HMM Match : Fork_head (HMM E-Value=0) 87 1e-17
SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29) 72 5e-13
SB_56358| Best HMM Match : Fork_head (HMM E-Value=1.2e-30) 70 2e-12
SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_5489| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_38984| Best HMM Match : Fork_head (HMM E-Value=3e-06) 48 1e-05
SB_647| Best HMM Match : Fork_head (HMM E-Value=3.5e-21) 46 5e-05
SB_9455| Best HMM Match : Fork_head (HMM E-Value=0.021) 38 0.011
SB_40026| Best HMM Match : Fork_head (HMM E-Value=4.2e-05) 37 0.019
SB_55219| Best HMM Match : Lipoprotein_17 (HMM E-Value=4.5) 37 0.025
SB_51004| Best HMM Match : Fork_head (HMM E-Value=3) 36 0.043
SB_11344| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_55598| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_13055| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.70
SB_58766| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_12924| Best HMM Match : Fork_head (HMM E-Value=0.88) 30 2.8
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_12456| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 29 6.5
SB_47763| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_6186| Best HMM Match : HSP20 (HMM E-Value=1.1e-06) 29 6.5
SB_4542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_5069| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 331
Score = 169 bits (410), Expect = 3e-42
Identities = 72/103 (69%), Positives = 87/103 (84%)
Query: 76 KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
KP HSYI LIAMAILS+ +K++L DIYQ+I DN+PY+R + WRNSIRHNLSLN+CF+
Sbjct: 82 KPAHSYIALIAMAILSNSSKKMILGDIYQYISDNFPYYRNKDKSWRNSIRHNLSLNECFI 141
Query: 136 KAGRSANGKGHYWAIHPANVEDFRKGDFRRRKAQRKVRKHMGL 178
KAGRS NGKG+YWAIHPAN+EDF GDFRRR+A+R+VRK L
Sbjct: 142 KAGRSENGKGNYWAIHPANLEDFANGDFRRRRARRRVRKSNAL 184
>SB_10139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 161 bits (392), Expect = 5e-40
Identities = 68/99 (68%), Positives = 83/99 (83%)
Query: 73 EEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLND 132
EE KP SYIGLI AI+S P++KLVLSDIY +IL +YPYFR +G GWRNSIRHNLSLN+
Sbjct: 96 EEEKPSQSYIGLIGKAIMSVPQKKLVLSDIYNYILTHYPYFRNKGAGWRNSIRHNLSLNE 155
Query: 133 CFVKAGRSANGKGHYWAIHPANVEDFRKGDFRRRKAQRK 171
CFVK GRS+NGKGH+WAI+P N EDF KG++RR++ +K
Sbjct: 156 CFVKVGRSSNGKGHFWAINPENYEDFSKGEYRRKRVSKK 194
>SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 157 bits (380), Expect = 1e-38
Identities = 68/98 (69%), Positives = 81/98 (82%)
Query: 76 KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
KP SYI LI+ AILSSPE+KL+LSDIY IL YPYFRT+G GWRNSIRHNLSLN+CFV
Sbjct: 80 KPNQSYISLISEAILSSPEQKLILSDIYNFILTRYPYFRTKGTGWRNSIRHNLSLNECFV 139
Query: 136 KAGRSANGKGHYWAIHPANVEDFRKGDFRRRKAQRKVR 173
KAGRS NGKGH+WAI +DFR+GDFR+R++ R+ +
Sbjct: 140 KAGRSPNGKGHFWAIDATYFDDFRRGDFRKRRSYRRYK 177
>SB_14691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 131 bits (316), Expect = 8e-31
Identities = 54/100 (54%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Query: 73 EEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYF-RTRGPGWRNSIRHNLSLN 131
++ K +++ +IA +ILS P +++ LS IY I NYP+F + +GPGWRNS+RHNLS N
Sbjct: 122 DDDKNAETFVAVIAQSILSVPTKRMTLSSIYSFIAKNYPHFDKEKGPGWRNSVRHNLSSN 181
Query: 132 DCFVKAGRSANGKGHYWAIHPANVEDFRKGDFRRRKAQRK 171
DCFVKA R+ NGKGHYW IHP ++ +F KG+FRRR+ R+
Sbjct: 182 DCFVKASRAENGKGHYWMIHPKDLPEFSKGNFRRRRKPRR 221
>SB_38328| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 118 bits (285), Expect = 5e-27
Identities = 50/98 (51%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
Query: 76 KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
KP +SY+ LIAMAI SPE++L L+ IYQ+I+ +PY+ GW+NSIRHNLSLN+CF+
Sbjct: 44 KPPYSYVALIAMAIRESPEKRLTLNGIYQYIISKFPYYEKNKKGWQNSIRHNLSLNECFI 103
Query: 136 KAGRSANG--KGHYWAIHPANVEDFRKGDFRRRKAQRK 171
K R G KG+YW + PA + F KG++RRR+ ++
Sbjct: 104 KVPREGGGERKGNYWTLDPACEDMFEKGNYRRRRRMKR 141
>SB_13048| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 311
Score = 117 bits (281), Expect = 1e-26
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 3/107 (2%)
Query: 76 KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
KP +SYI LI MAIL SP+RKL LSDI + I +PY+R + P W+NSIRHNLSLNDCFV
Sbjct: 64 KPPYSYIALITMAILQSPQRKLTLSDICEFIKRRFPYYREKFPSWQNSIRHNLSLNDCFV 123
Query: 136 KAGRSAN--GKGHYWAIHPANVEDFRKGDF-RRRKAQRKVRKHMGLA 179
K R GKG+YW + PA+ F G F RRRK ++ R G++
Sbjct: 124 KMPREPGNPGKGNYWTLDPASEGMFDNGSFLRRRKRFKRPRPPDGMS 170
>SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 116 bits (278), Expect = 3e-26
Identities = 62/128 (48%), Positives = 80/128 (62%), Gaps = 10/128 (7%)
Query: 54 YGPRLALSMSLLQQRALQPEEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYF 113
YGP L S Q + + KP +SYI LIAMAI S+PE+++ LS IY I+D +PY+
Sbjct: 41 YGPPLPRS-----QHPTRQDMVKPPYSYIALIAMAIQSAPEKRITLSGIYSFIMDRFPYY 95
Query: 114 RTRGPGWRNSIRHNLSLNDCFVKAGRSAN--GKGHYWAIHPANVEDFRKGDF-RRRKAQR 170
R GW+NSIRHNLSLN+CFVK R GKG +W + P ++ F G + RRRK R
Sbjct: 96 RNNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSFWMLDPDSLNMFENGSYLRRRKRFR 155
Query: 171 K--VRKHM 176
K V+K M
Sbjct: 156 KKDVQKSM 163
>SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 392
Score = 115 bits (277), Expect = 4e-26
Identities = 56/109 (51%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 66 QQRALQPEEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIR 125
+Q Q KP +SYI LI MAI SSP+R+L LS+IY I +P+++T W+NSIR
Sbjct: 33 KQSRRQQSRGKPPYSYIALICMAITSSPQRQLTLSEIYDFISQRFPFYQTCSIKWKNSIR 92
Query: 126 HNLSLNDCFVKAGRSAN--GKGHYWAIHPANVEDFRKGDF-RRRKAQRK 171
HNL+LNDCF+K R N GKG+YW I P +V+ F G F RRRK R+
Sbjct: 93 HNLTLNDCFIKLPREPNRPGKGNYWTIDPTSVDMFDNGSFLRRRKRFRR 141
>SB_15898| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 460
Score = 112 bits (270), Expect = 3e-25
Identities = 56/120 (46%), Positives = 76/120 (63%), Gaps = 3/120 (2%)
Query: 66 QQRALQPEEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIR 125
+ R Q +E KP +SY LI AI SSPE+K+ LS+IYQ I D++PY++ G GW+NSIR
Sbjct: 63 EARQHQTKESKPPYSYANLITFAINSSPEKKMTLSEIYQWICDHFPYYKEAGNGWKNSIR 122
Query: 126 HNLSLNDCFVKAGRSAN--GKGHYWAIHPANVEDFRKGDFRRRKAQRKVRKHMGLAVDDD 183
HNLSLN CF+K RS + GKG YWAI N ++ G + RK + + VD++
Sbjct: 123 HNLSLNKCFIKVPRSKDDPGKGSYWAI-DQNPQEESPGSRQNRKRKTSESRLSPYGVDEN 181
>SB_34638| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 312
Score = 111 bits (266), Expect = 9e-25
Identities = 58/134 (43%), Positives = 77/134 (57%), Gaps = 4/134 (2%)
Query: 43 YPPTVAPCYGPYGPRLALSMSLLQQRALQPEEPKPQHSYIGLIAMAILSSPERKLVLSDI 102
Y P + P L ++ + Q + +E KP SYI LI M+I +SP R L++I
Sbjct: 60 YAPVIKPTESAQEALLTMNTNP-QSKPYLCDEVKPPFSYIALITMSIEASPYRMRTLNEI 118
Query: 103 YQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFVKAGRS---ANGKGHYWAIHPANVEDFR 159
Y+ I+ +PYFR W+NSIRHNLSLNDCFVK RS GKG+YW +HP+ + F
Sbjct: 119 YEFIMTRFPYFRKNQQKWQNSIRHNLSLNDCFVKVPRSIFGKPGKGNYWTLHPSCGDMFG 178
Query: 160 KGDFRRRKAQRKVR 173
G F RR + K R
Sbjct: 179 SGSFLRRPKRFKCR 192
>SB_47058| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 312
Score = 111 bits (266), Expect = 9e-25
Identities = 58/134 (43%), Positives = 77/134 (57%), Gaps = 4/134 (2%)
Query: 43 YPPTVAPCYGPYGPRLALSMSLLQQRALQPEEPKPQHSYIGLIAMAILSSPERKLVLSDI 102
Y P + P L ++ + Q + +E KP SYI LI M+I +SP R L++I
Sbjct: 60 YAPVIKPTESAQEALLTMNTNP-QSKPYLCDEVKPPFSYIALITMSIEASPYRMRTLNEI 118
Query: 103 YQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFVKAGRS---ANGKGHYWAIHPANVEDFR 159
Y+ I+ +PYFR W+NSIRHNLSLNDCFVK RS GKG+YW +HP+ + F
Sbjct: 119 YEFIMTRFPYFRKNQQKWQNSIRHNLSLNDCFVKVPRSIFGKPGKGNYWTLHPSCGDMFG 178
Query: 160 KGDFRRRKAQRKVR 173
G F RR + K R
Sbjct: 179 SGSFLRRPKRFKCR 192
>SB_51547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 110 bits (264), Expect = 2e-24
Identities = 49/88 (55%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 97 LVLSDIYQHILDNYPYF-RTRGPGWRNSIRHNLSLNDCFVKAGRSANGKGHYWAIHPANV 155
+ LS IY I YP+F + +GPGWRNS+RHNLS NDCFVKA R+ NGKGHYW IHP ++
Sbjct: 1 MTLSCIYSFIAKTYPHFDKEKGPGWRNSVRHNLSSNDCFVKASRAENGKGHYWMIHPKDL 60
Query: 156 EDFRKGDFRRRKAQRKVRKHMGLAVDDD 183
+F KG+FRR + R+ R GL D
Sbjct: 61 PEFSKGNFRRPRKPRRPRCIHGLGCLSD 88
>SB_32062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 109 bits (263), Expect = 2e-24
Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 76 KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
KP +SYI LI MAI SP + L LS+IYQ I+D +PY+R W+NSIRH+LS NDCFV
Sbjct: 39 KPPYSYISLITMAIQQSPNKMLTLSEIYQFIMDLFPYYRQNQQRWQNSIRHSLSFNDCFV 98
Query: 136 KAGRSAN--GKGHYWAIHPANVEDFRKGDFRRRKAQRKVRKHMGLA 179
K RS + GKG YW +HP F G + RR+ + K K L+
Sbjct: 99 KVPRSPDRPGKGSYWTLHPDCGNMFENGCYLRRQKRFKAEKKPDLS 144
>SB_5331| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 503
Score = 103 bits (247), Expect = 2e-22
Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
Query: 73 EEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLND 132
E+ KP +SY LI AILS+ +++L LS IY HI NYPY+RT GW+NSIRHNLSLN
Sbjct: 113 EDGKPPYSYAQLIVQAILSATDKQLTLSGIYAHITKNYPYYRTADKGWQNSIRHNLSLNR 172
Query: 133 CFVKAGRSAN--GKGHYWAIHPANVEDFRKGDFRRRKAQRKV 172
FVK R+ + GKG +W I P+ + + FR+R+ QR V
Sbjct: 173 YFVKVPRAQDEPGKGSFWRIDPSCEQKLAEQAFRKRR-QRGV 213
>SB_3400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 103 bits (246), Expect = 3e-22
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 61 SMSLLQQRALQPEEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGP-G 119
S S L + P KP +SY+ LI+MAI SP RK+ L+ IY I +PY+ + G
Sbjct: 46 SASTLLYKPYTPAPQKPPYSYVALISMAIKQSPGRKITLNGIYHFITSAFPYYTWQNKRG 105
Query: 120 WRNSIRHNLSLNDCFVKAGR--SANGKGHYWAIHPANVEDFRKGDFRRRKAQRK 171
W+NSIRHNLSLN CFVK R + GKG YW + PA E F G + RR+ +K
Sbjct: 106 WQNSIRHNLSLNRCFVKVHREKADPGKGCYWTLDPAYEEMFEDGKYWRRRRTKK 159
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 100 bits (239), Expect = 2e-21
Identities = 44/96 (45%), Positives = 63/96 (65%)
Query: 76 KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
KP SY+ LI+ AIL S E++L LS+IY I +P+F GW+N++RHNLSL++CFV
Sbjct: 19 KPSTSYVALISTAILESAEKRLTLSEIYDAIELKFPWFTATRMGWKNTVRHNLSLHECFV 78
Query: 136 KAGRSANGKGHYWAIHPANVEDFRKGDFRRRKAQRK 171
K S+NGK YW +H FR+G+++R + K
Sbjct: 79 KGELSSNGKSCYWRVHERFEGRFRRGEYKRPVKESK 114
>SB_12905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 99 bits (238), Expect = 2e-21
Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 76 KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
+P +SYI LIAMA+ +SPE++L L I + I D +P++R P W+ IR+NLSLNDCF+
Sbjct: 109 RPPYSYIALIAMAVQNSPEKRLTLDGICKFIRDRFPFYRETYPSWKICIRNNLSLNDCFI 168
Query: 136 KAGRSANG--KGHYWAIHPANVEDFRKGDFRRRKAQRK 171
K G ++ KG+YW + P + F G F RRK + K
Sbjct: 169 KTGIKSDEPLKGNYWTLDPESYNMFENGSFLRRKTRFK 206
>SB_53442| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 407
Score = 93.5 bits (222), Expect = 2e-19
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Query: 76 KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
KP +SY LI MA+ + K+ LS IY+ I +N+ ++R P W+NSIRHNLSLN CFV
Sbjct: 98 KPPYSYATLICMAMRDTKRVKITLSAIYKWIKENFMFYRVADPTWQNSIRHNLSLNKCFV 157
Query: 136 KAGRSAN--GKGHYWAIHPANVEDFRKGDFRRRK 167
K R + GKG +W I PA + F G F+RR+
Sbjct: 158 KVPRKKDEPGKGGFWRIDPAYADMFVDGVFKRRR 191
>SB_15500| Best HMM Match : Fork_head (HMM E-Value=1.7e-39)
Length = 554
Score = 93.5 bits (222), Expect = 2e-19
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Query: 49 PCYGPYGPRLALSMSLLQQRALQPEEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILD 108
PC + +SMS Q + E KP HSYI LIA AIL+SPE++L L++I ++++
Sbjct: 106 PCAVARNTIMMMSMSGGSQCLEKAERMKPPHSYIALIATAILNSPEKRLTLTEINEYLVK 165
Query: 109 NYPYFRTRGPGWRNSIRHNLSLNDCFVKAGRSAN---GKGHYW 148
+Y +FR GW+NS+RHNLS N CFVK R GK +YW
Sbjct: 166 HYVFFRGSYQGWKNSVRHNLSFNKCFVKILRDPARPWGKDNYW 208
>SB_10836| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 458
Score = 87.4 bits (207), Expect = 1e-17
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 76 KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
KP +S+ LI MAI SP ++L + DIY I+D++PYFR GW+NS+RHNLSLN CF
Sbjct: 122 KPPYSFSSLIFMAIEESPNKRLPVKDIYNWIMDHFPYFRDARLGWKNSVRHNLSLNKCFK 181
Query: 136 KAGRSAN---GKGHYWAIHP 152
K + GKG W + P
Sbjct: 182 KVDKDKGQNVGKGSLWTVDP 201
>SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 74.1 bits (174), Expect = 1e-13
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 79 HSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRG-----PGWRNSIRHNLSLNDC 133
+SY LI AI SSPE++L LS IY ++++ PYFR +G GW+NSIRHNLSL+
Sbjct: 67 YSYADLITQAIQSSPEKRLTLSQIYDWMVNSVPYFRDKGDSNSSAGWKNSIRHNLSLHSK 126
Query: 134 FVKAGRSANGK 144
FV+ NGK
Sbjct: 127 FVRVQNEGNGK 137
>SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29)
Length = 594
Score = 72.1 bits (169), Expect = 5e-13
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 71 QPEEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSL 130
Q + +P +Y LI AIL SP+ +L L++IY + YFR W+N++RHNLSL
Sbjct: 403 QKADVRPPFTYASLIRQAILDSPDTQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSL 462
Query: 131 NDCFVKAGRSANGKGHYWAIHPANVEDFRK 160
+ CFV R N KG W + + E+F K
Sbjct: 463 HKCFV---RKENVKGAVWMV---DEEEFMK 486
>SB_56358| Best HMM Match : Fork_head (HMM E-Value=1.2e-30)
Length = 289
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 107 LDNYPYFRTRGPGWRNSIRHNLSLNDCFVKAGRSAN--GKGHYWAIHPANVEDFRKGDFR 164
+D++P++R W+NS+RHNLS NDCFVK R + GKG WA+HP F G F
Sbjct: 1 MDHFPFYRDNTQRWQNSLRHNLSFNDCFVKIPRRPDQPGKGSLWALHPDCGTMFENGSFL 60
Query: 165 RRKAQRK 171
RR+ + K
Sbjct: 61 RRRKRFK 67
>SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 56.8 bits (131), Expect = 2e-08
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 71 QPEEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRG-----PGWRNSIR 125
+ + P SY LIA AI S +KL L IY + N PYF+ + GW+N+IR
Sbjct: 741 EKKNPWGNASYSDLIARAIDQSKFQKLTLPQIYDWFVINVPYFKAKEHLPSTKGWKNAIR 800
Query: 126 HNLSLNDCFVKAGRSANGKGHYWAIHPANVEDFRKGDFRRRKAQRKVR 173
H LSL FV+ N +W + +D R+ RRRK + K R
Sbjct: 801 HTLSLRQRFVRLPDPGNPYRSWWTVAS---DDVRRQ--RRRKPRWKSR 843
>SB_5489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 52.4 bits (120), Expect = 5e-07
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 80 SYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGP--GWRNSIRHNLSLNDCFVKA 137
SY L+A AI SSP+++L L +IY DN W+N+IRH LS F++
Sbjct: 451 SYSDLLAEAISSSPDKRLTLQEIYMWFEDNVAGISPSSVTHDWKNTIRHTLSRRKRFLRI 510
Query: 138 GRSANGKGHYWAIHPANVEDFRKG-DFRRRKAQR 170
S +W ++PA E + + +R +A R
Sbjct: 511 AMSEKKNKSWWTVNPAFSEINKPALNLQRSRAMR 544
>SB_38984| Best HMM Match : Fork_head (HMM E-Value=3e-06)
Length = 246
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 71 QPEEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTR-----GPGWR---- 121
+ ++P SY LIA AI S ++KL L IY+ ++N YFR R GW+
Sbjct: 127 EKKKPWGNASYSDLIARAITQSTKQKLTLPQIYEWFVENVSYFRDREHLPSTKGWKLIRI 186
Query: 122 ------NSIRHNLSLNDCFVKAGRSANGKGHYWAI 150
N+IRH LSL FV+ N +W++
Sbjct: 187 PCAIIQNAIRHTLSLRQRFVRTVDPTNPYRSWWSL 221
>SB_647| Best HMM Match : Fork_head (HMM E-Value=3.5e-21)
Length = 491
Score = 45.6 bits (103), Expect = 5e-05
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 13/85 (15%)
Query: 76 KPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFV 135
+P +SY LI +AI S+ E+++ L +IY+ I + +PY+ W+
Sbjct: 60 RPPYSYATLILLAINSTEEKRMTLQEIYKWIEERFPYYTKCKKAWKE------------- 106
Query: 136 KAGRSANGKGHYWAIHPANVEDFRK 160
K GKG YW+I P E+ +
Sbjct: 107 KRPADLPGKGSYWSISPEGKENIMR 131
>SB_9455| Best HMM Match : Fork_head (HMM E-Value=0.021)
Length = 266
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 68 RALQPEEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGP-----GWRN 122
RA + + P SY +I+ AI+S P ++ L IY+ I++N YF + GW++
Sbjct: 152 RASKTQNPWGSESYSEMISKAIMSCPSQEATLHTIYEWIVNNVSYFADKADYPSTHGWKS 211
Query: 123 SIR 125
++
Sbjct: 212 HLK 214
>SB_40026| Best HMM Match : Fork_head (HMM E-Value=4.2e-05)
Length = 156
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 71 QPEEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHIL 107
Q KP SY LI MAI S E++L LS IY++I+
Sbjct: 56 QKNTEKPAFSYNALIMMAIRGSEEKRLTLSGIYEYIM 92
>SB_55219| Best HMM Match : Lipoprotein_17 (HMM E-Value=4.5)
Length = 210
Score = 36.7 bits (81), Expect = 0.025
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 68 RALQPEEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYF 113
RA + + P SY +I+ AI+S P ++ L IY+ I++N YF
Sbjct: 152 RASKTQNPWGSESYSEMISKAIMSCPSQEATLHTIYEWIVNNVSYF 197
>SB_51004| Best HMM Match : Fork_head (HMM E-Value=3)
Length = 136
Score = 35.9 bits (79), Expect = 0.043
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 76 KPQHSYIGLIAMAILSSPERKLVLSDI 102
+P +SYI LIAMA+ +SPE++L L I
Sbjct: 109 RPPYSYIALIAMAVQNSPEKRLTLDGI 135
>SB_11344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 122 NSIRHNLSLNDCFVKAGR---SANGKGHYWAIHPANVEDFRK 160
NS+RHNLSLN F K R ++ KG W++ P + K
Sbjct: 299 NSVRHNLSLNKAFCKLERPQGASQRKGCLWSLKPERRDQMDK 340
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 75 PKPQHSYIGLIAMAILSSPERKLVLSDIYQHIL 107
PKP SY LIAMA+ +S L +S+IY+ ++
Sbjct: 169 PKPLFSYSCLIAMALKNSDSGTLPVSEIYKFMI 201
>SB_55598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 668
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 80 SYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRG 117
SY LIA AI SP + + + DIY+ DN P RG
Sbjct: 82 SYFDLIAEAIEPSPCKAMTIKDIYRWFSDNIPELIERG 119
>SB_13055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 219 RQFDVASLLAPDETPEKRQRRDSSCDEEPEEDIDVVASDQEERGVDEET 267
R D+ L PD +P D + D++ ++ + + SD+EE +D+ T
Sbjct: 334 RSDDLFEPLTPDHSPTDLFMSDEADDDDEQDAYEEILSDEEEMSLDDGT 382
>SB_58766| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 31.1 bits (67), Expect = 1.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 122 NSIRHNLSLNDCFVKAGRSANGKGHYWAIHP 152
N++RH LS+ FV+ ++ G +W + P
Sbjct: 1 NTVRHTLSMRKRFVRVAMTSKGNKSWWTVKP 31
>SB_12924| Best HMM Match : Fork_head (HMM E-Value=0.88)
Length = 48
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 80 SYIGLIAMAILSSPERKLVLSDIYQHILDN 109
+Y L+A AI SSPE++L L IY+ +N
Sbjct: 4 TYSELLAKAISSSPEQRLTLQGIYRWFEEN 33
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 214 GQPRKRQFDVASLLAPDETP-----EKRQRRDSSCDEEPEEDIDVVASDQEERGVDEETR 268
G+P R+F S P + P +KR S D + + ID V + E+R E R
Sbjct: 4677 GEPTTRRFSTGSNAKPKKVPPPTPPKKRSGSWKSRDSDSDSSIDAVLDEMEKRRAGYEDR 4736
>SB_12456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 213 GGQPRKRQFDVASLLAPDETPEKRQRRDSSCDEEPEEDIDVVASDQEERGVDEE 266
GG R + D + +E E+ + + +EE EE+ + ++EE +EE
Sbjct: 60 GGGVRSEEEDELLIKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 113
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 222 DVASLLAPDETPEKRQRRDSSCDEEPEEDIDVVASDQEERGVDEETRG 269
DV ++ DE E+ + + + DEE E++ + VA +EE G E G
Sbjct: 1878 DVVEVIDEDECVEEEETQPTVEDEEEEKE-EEVAGLEEEEGTSGEVPG 1924
>SB_47763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 230 DETPEKRQRRDSSCDEEPEEDIDVVASDQEERGVDEE 266
DE E+ + + +EE EE+ ++EE+G +EE
Sbjct: 52 DEEEEEEEEEEEEEEEEKEEEEKEEEEEEEEKGEEEE 88
>SB_6186| Best HMM Match : HSP20 (HMM E-Value=1.1e-06)
Length = 237
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 229 PDETPEKRQRRDSSCDEEPEEDIDVVASD 257
P +K+QR + DE+PE I+++ D
Sbjct: 206 PVRVNQKQQREEKKLDEQPETTIEIIPED 234
>SB_4542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 95 RKLVLSDIYQHILDNYP--YFRTRGPGWRNSIRHNLS 129
R+ + + H+ +YP +FRT GPG S+ H S
Sbjct: 415 RRYLFTHFRAHVPGHYPLTHFRTHGPGVTRSLPHTCS 451
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 217 RKRQFDVASLLAPDETPE-KRQRRDSSCDEEPEEDIDVVA-SDQEERGVDEE 266
RK+ DV + +E P K R+ S DEEP E+ A S +E+ V++E
Sbjct: 1138 RKKPVDVE--MGEEEAPPCKAARKSPSADEEPAEEAPSKALSGEEDEWVEKE 1187
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.136 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,638,483
Number of Sequences: 59808
Number of extensions: 451940
Number of successful extensions: 1915
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1797
Number of HSP's gapped (non-prelim): 90
length of query: 315
length of database: 16,821,457
effective HSP length: 82
effective length of query: 233
effective length of database: 11,917,201
effective search space: 2776707833
effective search space used: 2776707833
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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