GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001488-TA|BGIBMGA001488-PA|IPR001766|Fork head
transcription factor
         (315 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    40   9e-05
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     26   1.6  
AY062202-1|AAL58563.1|  151|Anopheles gambiae cytochrome P450 CY...    25   2.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   3.7  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   3.7  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.5  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 39.9 bits (89), Expect = 9e-05
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 80  SYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRG 117
           SY  LI  AI S+ + +L LS IY+ ++ N PYF+ +G
Sbjct: 120 SYADLITQAISSASDSRLTLSQIYEWMVQNVPYFKDKG 157


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 14/82 (17%)

Query: 9   SWPLGKDAPTVTAAAIDHYRLQLYNYAVAERLR--LYP--PTVA-----PCYGPYGPRLA 59
           S+P G D+     AA   Y  Q   YA+A  ++   YP  PT A     P Y  Y P   
Sbjct: 147 SYPWGNDS-----AADYAYHAQYPPYALATDIKPMYYPSYPTEANFQPHPYYPKYEPDAY 201

Query: 60  LSMSLLQQRALQPEEPKPQHSY 81
           ++ S  + R +  ++P  Q SY
Sbjct: 202 ITASTERSRGVTGDQPSLQSSY 223


>AY062202-1|AAL58563.1|  151|Anopheles gambiae cytochrome P450
          CYP4H14 protein.
          Length = 151

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 6/37 (16%)

Query: 12 LGKDAPTVTAAAIDHYRLQLYNY---AVAERLRLYPP 45
          LGKD  T   A + +  LQ + Y    V E LR+YPP
Sbjct: 42 LGKDHKT---AELTYQNLQEFKYLDLVVKEGLRMYPP 75


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 244 DEEPEEDIDVVASDQEERGVDEETRGPLTTATQY 277
           D EPE+D +     +E + + + T GPL+   QY
Sbjct: 291 DGEPEKDEENDDLRRELKSIPDPTVGPLSYLKQY 324


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 14/74 (18%)

Query: 39  RLRLYPPTVAPCYGPYGPRLALSMS--------LLQQRALQPEEPKPQHSY----IGLIA 86
           ++R+YPPT      PYG RL  ++         L  +  ++ ++   Q  Y    +G   
Sbjct: 314 KMRVYPPT--KIVTPYGGRLIWTLPGRTKMIAHLKDKNKIRHKKRWSQVMYMYYLLGYRI 371

Query: 87  MAILSSPERKLVLS 100
           M + +SPERK+V++
Sbjct: 372 MQLNTSPERKMVIA 385


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 9/13 (69%), Positives = 11/13 (84%)

Query: 164  RRRKAQRKVRKHM 176
            RRR+AQR+ R HM
Sbjct: 1160 RRRQAQRQARAHM 1172


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.136    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 332,184
Number of Sequences: 2123
Number of extensions: 14735
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 6
length of query: 315
length of database: 516,269
effective HSP length: 64
effective length of query: 251
effective length of database: 380,397
effective search space: 95479647
effective search space used: 95479647
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)