GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001488-TA|BGIBMGA001488-PA|IPR001766|Fork head
transcription factor
         (315 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    25   1.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   8.0  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 213 GGQPRKRQFDVASLLAPDETPE 234
           GG+ R+  F+V SLL  +ET +
Sbjct: 36  GGKSRQSSFEVTSLLMREETED 57


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 136 KAGRSANGKGHYWAIHPANVEDFRKGDFRRRKAQRKVRKHMGLAV 180
           K  +   G G  + I+ AN    +K +    K +RK  K + + +
Sbjct: 581 KKDKKNAGSGSRFTIYKANKASKKKREKSSAKKERKATKTLAIVL 625


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.136    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,374
Number of Sequences: 429
Number of extensions: 3989
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 2
length of query: 315
length of database: 140,377
effective HSP length: 58
effective length of query: 257
effective length of database: 115,495
effective search space: 29682215
effective search space used: 29682215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)