Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001487-TA|BGIBMGA001487-PA|IPR000618|Insect cuticle
protein
(214 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0776 + 5983684-5983857,5983962-5984072,5984151-5984302,598... 34 0.10
05_05_0201 + 23206859-23206998,23207858-23207936,23208121-232082... 30 1.2
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 30 1.6
09_02_0050 + 3600911-3601261,3603341-3604195 28 5.0
01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152 28 6.6
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 27 8.7
06_03_0905 + 25843547-25844314 27 8.7
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 27 8.7
05_06_0175 + 26159670-26160119 27 8.7
02_04_0275 - 21469391-21470650 27 8.7
02_01_0051 - 385738-385968,386439-386864 27 8.7
>07_01_0776 +
5983684-5983857,5983962-5984072,5984151-5984302,
5984403-5984460,5984568-5984616,5984714-5984958,
5985129-5985206,5986016-5986246
Length = 365
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 99 GHPIAQPAKIAYAAPVQNIAYAAPVPKLAYSAPVTKLAYPGSITKVAYAPAPVTYAQS 156
GHP A PA+ AA Y APVP Y P AY + A P P A +
Sbjct: 50 GHPYAWPAQHLMAAAAAGAPYGAPVPFPMYH-PGAAAAYYAHASMAAGVPYPTAEAMA 106
>05_05_0201 +
23206859-23206998,23207858-23207936,23208121-23208219,
23208561-23208674,23208762-23208910,23209010-23209091,
23209170-23209255,23209520-23209750,23209830-23210727
Length = 625
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/64 (32%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Query: 97 YEGHPIAQPAKIAYAAPVQNIAYAAPVPKLAYSAPVTKLAYPGSITKVAYAPAPVTYAQS 156
Y P A PA + P Q Y P +A AP P S YA P S
Sbjct: 483 YPAPPWAMPASVNSTNPFQPATYQMQNPPVASVAPTNTYPAPSS----PYAAPPRQQVPS 538
Query: 157 PLTK 160
P TK
Sbjct: 539 PATK 542
>10_08_0495 -
18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 87 NEHGFNANVRYEGHPIAQPAKIAYAAPVQNIAYAAPVPKLAYSAPVTKLAYPGSITKVAY 146
+ H +A Y G P ++ Y+ P Q AY+ P P Y AP + Y + Y
Sbjct: 757 SSHAPHAQGPY-GVPPGGDSRPGYSQPEQRPAYSQPYP--PYGAPPQQPPYGAPSQQPPY 813
Query: 147 -APAPVTYAQSP 157
AP P Y Q P
Sbjct: 814 GAPHPGHYQQPP 825
>09_02_0050 + 3600911-3601261,3603341-3604195
Length = 401
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 75 DGVHRIVEYTADNEHGFNANVRYEGHPIAQPAKIAYAAPVQNIAYAAPVPKLAYSAPVTK 134
+G+ + ++++ ++ +V+ +G + ++ +A + A P+ A VTK
Sbjct: 273 NGMVTTLATASESKKDYSYDVQNKGETVTLDTRVVNSAVTATVGDAEPLAVYA----VTK 328
Query: 135 LAYPGSITKVAYAPAP 150
P + KV APAP
Sbjct: 329 FLKPKELYKVVEAPAP 344
>01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152
Length = 205
Score = 27.9 bits (59), Expect = 6.6
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 81 VEYTADNEHGFNANVRYEGHPIAQPAKIAYAAPVQNIA---YAAPVPKLAYSAPVTKLAY 137
V Y G+ N RY HP + A + P + P + P+ L+Y
Sbjct: 58 VYYLRTGACGYGENCRYN-HPRDRAAAAVGSQPCAYYTQHGFCKFGPTCKFDHPMGTLSY 116
Query: 138 P---GSITKVAYAPAPVTYAQSPL 158
SIT + AP P+ YA +P+
Sbjct: 117 SPSASSITDLPIAPYPLNYAVAPV 140
>07_03_0982 +
23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/48 (35%), Positives = 21/48 (43%)
Query: 103 AQPAKIAYAAPVQNIAYAAPVPKLAYSAPVTKLAYPGSITKVAYAPAP 150
A P + A AP N AP P + AP +YP + VA AP
Sbjct: 68 APPPQYAGYAPPYNNPNPAPYPPESSPAPAPYYSYPPTAAGVATQHAP 115
>06_03_0905 + 25843547-25844314
Length = 255
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/59 (25%), Positives = 20/59 (33%)
Query: 101 PIAQPAKIAYAAPVQNIAYAAPVPKLAYSAPVTKLAYPGSITKVAYAPAPVTYAQSPLT 159
P+ +P + Y P P + Y P V Y PVTY P+T
Sbjct: 94 PVTRPPPVTYPTPPVTTPPVVVGPPVTYPTPPVTTPPVVVGPPVTYPTPPVTYPTPPVT 152
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 100 HPIAQPAKIAYAAPVQNIAYAAPVPKLAYSAPVTKLAYP--GSITKVAYAPAPVTYAQSP 157
H +P KI+ A+ ++ PVP + Y+AP A P G Y P ++ +P
Sbjct: 139 HQKNKPGKISAASTTHSVL-PVPVPAVPYAAPSPSYALPPAGYPAVPPYQSYPASHVPAP 197
>05_06_0175 + 26159670-26160119
Length = 149
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 103 AQPAKIAYAAPVQNIAYAAPVPKLAYSAPV 132
A P I+ A PVQ AP P++ +S PV
Sbjct: 25 APPPAISPAPPVQPYETRAPTPRVKHSRPV 54
>02_04_0275 - 21469391-21470650
Length = 419
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 101 PIAQPAKIAYAAPVQNIAYAAPVPK 125
P+A P +A AAP ++A A P+PK
Sbjct: 23 PVADPVTVA-AAPPGHLALAIPIPK 46
>02_01_0051 - 385738-385968,386439-386864
Length = 218
Score = 27.5 bits (58), Expect = 8.7
Identities = 26/55 (47%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 92 NANVRY--EGHPIA--QPAKIAYAA------PVQNIAYAAPVPKLAYSAPVTKLA 136
NA VRY H A QPA A AA PVQ P P L YSA TKLA
Sbjct: 66 NAAVRYLLRRHRRARQQPAAAAAAAEDPEKPPVQEADPPPPPPALVYSAAGTKLA 120
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.132 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,960,436
Number of Sequences: 37544
Number of extensions: 193297
Number of successful extensions: 417
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 413
Number of HSP's gapped (non-prelim): 15
length of query: 214
length of database: 14,793,348
effective HSP length: 79
effective length of query: 135
effective length of database: 11,827,372
effective search space: 1596695220
effective search space used: 1596695220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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