BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001485-TA|BGIBMGA001485-PA|undefined (65 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 30 0.27 12_02_0738 + 22669557-22669756,22669868-22669916,22670620-226706... 28 1.1 09_02_0222 + 5968232-5968467,5970811-5971187,5972216-5972256,597... 27 1.4 10_06_0181 - 11532765-11533203,11536867-11537036 26 3.3 >07_03_1397 + 26269186-26269525,26269727-26269932,26270225-26270327, 26270570-26270577 Length = 218 Score = 29.9 bits (64), Expect = 0.27 Identities = 12/35 (34%), Positives = 22/35 (62%) Query: 24 LCESTISKTQVSVTVGRGEFNPNGQSTLTEEFESK 58 L +S++ K+ + R EF PN +ST+ EF+++ Sbjct: 20 LGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQ 54 >12_02_0738 + 22669557-22669756,22669868-22669916,22670620-22670657, 22670977-22671058,22671146-22671195,22671381-22671847, 22671992-22672155,22672242-22672448,22672554-22672710, 22672858-22672965,22673161-22673234,22673364-22673521, 22673728-22673788,22673858-22673965 Length = 640 Score = 27.9 bits (59), Expect = 1.1 Identities = 11/31 (35%), Positives = 21/31 (67%) Query: 24 LCESTISKTQVSVTVGRGEFNPNGQSTLTEE 54 + + +SK +V + V RG+F+ +G+ + TEE Sbjct: 184 ITDGPLSKVKVEIVVLRGDFSNDGRVSWTEE 214 >09_02_0222 + 5968232-5968467,5970811-5971187,5972216-5972256, 5972808-5972843 Length = 229 Score = 27.5 bits (58), Expect = 1.4 Identities = 10/33 (30%), Positives = 21/33 (63%) Query: 26 ESTISKTQVSVTVGRGEFNPNGQSTLTEEFESK 58 +S + K+Q+ R EFN + ++T+ EF+++ Sbjct: 26 DSAVGKSQLLARFARNEFNLDSKATIGVEFQTR 58 >10_06_0181 - 11532765-11533203,11536867-11537036 Length = 202 Score = 26.2 bits (55), Expect = 3.3 Identities = 9/33 (27%), Positives = 21/33 (63%) Query: 26 ESTISKTQVSVTVGRGEFNPNGQSTLTEEFESK 58 +S + K+Q+ R EF+ + ++T+ EF+++ Sbjct: 18 DSAVGKSQILARFARNEFSIDSKATIGVEFQTR 50 Database: rice Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.312 0.128 0.366 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,460,111 Number of Sequences: 37544 Number of extensions: 35982 Number of successful extensions: 48 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44 Number of HSP's gapped (non-prelim): 4 length of query: 65 length of database: 14,793,348 effective HSP length: 45 effective length of query: 20 effective length of database: 13,103,868 effective search space: 262077360 effective search space used: 262077360 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.9 bits) S2: 52 (25.0 bits)
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