GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001485-TA|BGIBMGA001485-PA|undefined
         (65 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           21   3.3  
AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione S-tran...    21   4.4  
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            21   5.8  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 28   TISKTQVSVTVGRGEFNPNGQSTLTE 53
            T  K Q+   + RG+  PNG ++ ++
Sbjct: 1552 TFQKAQLRQKLKRGKIEPNGVASSSQ 1577


>AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione
           S-transferase D7 protein.
          Length = 218

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 10/22 (45%), Positives = 11/22 (50%)

Query: 39  GRGEFNPNGQSTLTEEFESKLR 60
           G  E N  G  TL   F SKL+
Sbjct: 196 GYKEINETGAETLAGLFRSKLK 217


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 24 LCESTISKTQVSVTVGRGEFNPNGQSTLTEEF 55
          L ES + K+ + +   +G+F+   +ST+   F
Sbjct: 30 LGESAVGKSSLVLRFVKGQFHEYQESTIGAAF 61


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.128    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,614
Number of Sequences: 2123
Number of extensions: 1060
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 65
length of database: 516,269
effective HSP length: 43
effective length of query: 22
effective length of database: 424,980
effective search space:  9349560
effective search space used:  9349560
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)
S2: 40 (20.2 bits)